Create release candidate.
This commit is contained in:
Gilles Sadowski
parent
f4dfc40142
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Apache Commons Math 4.0-beta1 RELEASE NOTES
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The Apache Commons Math team is pleased to announce the release of commons-math-parent-4.0-beta1
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The Apache Commons Math project is a library of lightweight mathematics
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and statistics components addressing common practical problems.
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This is a major release that requires source changes in applications.
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Lower-level functionality has been split off to new components, often
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with bug-fixes, performance enhancements and improved API:
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Commons RNG,
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Commons Numbers,
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Commons Geometry,
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Commons Statistics.
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Functionality still within Commons Math has been modularized and
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partly refactored.
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This is a work-in-progress (help welcome).
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Codes for which the refactoring has not been undertaken (or was
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deemed incomplete) have been moved to 'legacy' modules.
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The minimum version of the Java platform required to compile and use
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Commons Math is Java 8.
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Users are encouraged to upgrade to this version, and to the new
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components listed above (they are now Commons Math's dependencies).
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For code now located in the 'commons-math-legacy' module, upgrading
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will be a matter of changing the top-level package name:
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From 'org.apache.commons.math3' to 'org.apache.commons.math4.legacy'.
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Code in the 'commons-math-legacy-core' module comprise classes that
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moved from package 'org.apache.commons.math3' and package
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'org.apache.commons.math3.util' (e.g. 'MathArrays') to package
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'org.apache.commons.math4.legacy.core'.
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Notes:
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Class 'FastMath' was renamed 'AccurateMath' (now located in package
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'org.apache.commons.math4.legacy.core.jdkmath').
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Caveat:
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Although hundreds of issues have been fixed (see 'git log' and the
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reports in the bug-tracking system of all the listed components),
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many remain due to the lack of human resources necessary in order
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to support the whole codebase (it was one of the main reasons for
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creating more focused components).
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Changes in this version include:
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New features:
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o MATH-1648: "BicubicInterpolator": Provide partial derivatives of interpolating functions. Thanks to Alessandro Moscatelli.
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o MATH-1371: Add "ElkanKMeansPlusPlusClusterer" clustering algorithm. Thanks to Artem Barger.
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o MATH-1622: Update class "SimplexOptimizer" (in package "o.a.c.m.legacy.optim.nonlinear.scalar.noderiv")
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to support simulated annealing.
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o MATH-1551: "Percentile": Partial support for weighted data. Thanks to Allen Yu.
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o MATH-1529: "AkimaSplineInterpolator": Option to use alternative weights.
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o MATH-1509: Add "MiniBatchKMeansClusterer" clustering algorithm. Thanks to Chen Tao.
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o MATH-1519: Add "Calinski-Harabsz" clustering evaluator. Thanks to Chen Tao.
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o MATH-1516: Interface for ranking a list of clusters.
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o MATH-1477: "MillerUpdatingRegression": Fixed "ArrayIndexOutOfBounds" exception. Thanks to Chee Sing Lee.
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o MATH-1459: Create a way to automatically calculate a Jacobian matrix using a differentiator. Thanks to Adrian Porter.
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o MATH-1426: "DescriptiveStatistics": allow "Double[]" as initializer. Thanks to Karl Richter.
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o MATH-1383: Dependency toward the "Commons Rng" component.
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o MATH-1015: Gauss-Laguerre quadrature. Thanks to Thomas Neidhart.
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o MATH-1350: Improved code coverage (unit tests). Thanks to Rob Tompkins.
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o MATH-1336: New 64-bits RNG implementations. On 64-bits systems, they are ~35% faster than
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"java.util.Random" for generating "long" or "double" values. They also guarantee
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much better randomness than "Random" (cf. MATH-1327).
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o MATH-1335: Refactoring of uniform random number generator functionality: new API
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implemented in package "o.a.c.m.rng".
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o MATH-1337: Adaptor class from new API ("o.a.c.m.rng.RandomSource") to old API
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("o.a.c.m.random.RandomGenerator").
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o MATH-1327: Report on performance and correctness of the new RNG implementations.
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o MATH-1314: Javadoc of the new RNG API ("o.a.c.m.rng") mentions the "seed problem".
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o MATH-1158: New interface for sampling from distribution (package "o.a.c.m.distribution").
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o MATH-1351: New sampler API for "MultivariateRealDistribution".
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o MATH-1348: Adaptor for using one of the new RNG implementations where an instance of
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"java.util.Random" is required.
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o MATH-1295: "FactorialLog": Cache-based computation of the "log factorial" function (implemented
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as an inner class of "CombinatoricsUtils" in package "o.a.c.m.util"). Thanks to Aleksei Dievskii.
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o MATH-1271: Added divideUnsigned and remainderUnsigned to ArithmeticUtils. Thanks to Qualtagh.
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o Added a fast implementation of IEEEremainder in FastMath.
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o MATH-945: Added method "T log10()" to interface "RealFieldElement".
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o MATH-1039: Added logDensity(double) to RealDistribution and logProbability(int)
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to IntegerDistribution interface. The implementations have already been
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updated in release 3.3. Thanks to Aleksei Dievskii.
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Fixed Bugs:
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o MATH-1647: "HaltonSequenceGenerator": Raise exception when precondition is not met. Thanks to Maksym Bohachov.
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o MATH-1462: "EmpiricalDistribution": Use constant kernel for bins that contain up to 3 values.
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o MATH-1379: Fix "LoessInterpolator" (in package "o.a.c.m.legacy.analysis.interpolation"). Thanks to Richard Wilkinson.
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o MATH-1617: Class "BigReal": Fix equality check. Thanks to Ng Tsz Sum.
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o MATH-1613: Decrease maximum number of iterations in "SimpsonIntegrator" and
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"TrapezoidIntegrator" (due to the available range of the internal
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counter of function evaluations).
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o MATH-1431: "EmpiricalDistribution" handles empty bin. Thanks to Artem Onuchin.
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o MATH-1565: Add context to "OutOfRangeException". Thanks to Randy Strauss.
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o MATH-1558: "MidPointIntegrator": Fix iterative procedure in order to actually benefit
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from evaluations performed at earlier stages. Thanks to Sam Ritchie.
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o MATH-1555: "Atan2": Documentation issue. Thanks to Laurent Galluccio.
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o MATH-1549: "SimplexTableau": Internally "scale down" the problem definition when the
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constraints are defined with large numbers, in order to avoid spurious
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exceptions caused by floating-point accuracy errors. Thanks to Mohammad Rezaei.
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o MATH-1548: Avoid inefficiencies in computing the standard quality measures of a SOFM.
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o MATH-1537: Clean-up (typos and unused "import" statements). Thanks to Jin Xu.
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o MATH-1531: "EmpiricalDistribution": Workaround to avoid spurious exception.
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o MATH-1511: Issue in site generation and developers documentation.
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o MATH-1518: Remove code duplication by moving method to class "Cluster".
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o MATH-1388: Avoid overflow.
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o MATH-1401: "ClopperPearsonInterval": Missing cases. Thanks to Michele De Stefano.
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o MATH-1463: "IntegerSequence.incrementor": Throw "NoSuchElementException" from "next" method.
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o MATH-1458: "SimpsonIntegrator": Fixed iteration. Thanks to Alex Herbert.
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o MATH-1419: "PolynomialSplineFunction": incorrect usage of exception. Thanks to Hang Park.
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o MATH-1413: add generics to the Frequency class
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o MATH-1417: "RRQRDecomposition": bug in method "performHouseholderReflection". Thanks to Jean-Francois Lecomte.
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o MATH-1381: Fix "BinomialTest": P-value larger than 1. Thanks to Kexin Xie.
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o MATH-1382: "MultivariateNormalDistribution": performance improvement (by
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removing unnecessary copying). Thanks to Stefan Bunk.
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o MATH-1405: "KolmogorovSmirnovTest": bug in "fixTies". Thanks to Daniil Finkel.
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o MATH-1376: "SimplexOptimizer": Wrong value of iteration number was passed to the convergence checker. Thanks to Thomas Weise.
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o MATH-1319: Major refactoring of package "o.a.c.m.random".
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o MATH-1366: Removed obsolete RNG API (replaced by classes under "o.a.c.m.rng").
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o MATH-1340: Avoid exception swallowing (in class "TestUtils").
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o MATH-1339: Avoid redundant object creation.
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o MATH-1356: "HypergeometricDistribution": Handle special cases that produced NaN.
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o MATH-1343: "BetaDistribution": Removed unnecessary recomputation.
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o MATH-1124: "JDKRandomGenerator": Method "nextInt(int)" now throws a "NotStrictlyPositiveException".
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The class now delegates to (rather inherits from) "java.util.Random".
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o MATH-1300: "AbstractRandomGenerator" and "BitsStreamGenerator": Remove a redundant call
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to the random data provider. Thanks to Rostislav Krasny.
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o MATH-1231: Lifted unnecessary restriction on constructor's argument of
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"MicrosphereInterpolator" (package "o.a.c.m.analysis.interpolation").
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o MATH-1230: The "SimplexSolver" will now throw a "DimensionMismatchException"
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when calling "optimize(...)" with linear constraints whose dimension
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does not match the dimension of the objective function.
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o MATH-1222: Use Double.isNaN rather than x != x in FastMath. Thanks to Benedikt Ritter.
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o MATH-1143: Added helper methods to FunctionUtils for univariate and multivariate differentiable functions conversion.
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o MATH-964: Removed unused package private class PollardRho in package primes.
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o MATH-1221: Improve performance of "ZipfDistribution" by caching the nth generalized harmonic.
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o MATH-1205: Methods "evaluate(...)" of class "Variance" changed the internal state
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although it was stated differently in the javadoc.
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o MATH-1191: Fixed ignored method parameters in QRDecomposition protected methods.
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o MATH-1212: Changed javadoc as the RandomDataGenerator class does not implement
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an interface anymore (the previous interface has been deprecated in
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3.X and removed in 4.0).
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Changes:
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o MATH-1653: Remove class "CombinatoricsUtils" (in package "o.a.c.m.util").
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Functionality is in "Commons Numbers" combinatorics package.
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o MATH-1640: Do not change caller's arguments in "KMeansPlusPlusClusterer":
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A negative value for "maxIterations" will raise an exception.
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o MATH-1629: Throw "ArithmeticException" instead of "MathArithmeticException".
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o MATH-1630: Introduce "JdkMath" class for redirecting calls to either JDK or CM
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implementations of the functions defined in "java.lang.Math".
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o Simplify assertions with simpler equivalent. Thanks to Arturo Bernal.
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o MATH-1573: Remove redundant local variables. Thanks to Arturo Bernal.
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o MATH-1572: Simplify conditional expressions. Thanks to Arturo Bernal.
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o MATH-1616: Refactor "EmpiricalDistribution" class (in package "o.a.c.m.legacy.distribution").
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o MATH-1595: Clean up "o.a.c.math4.legacy.random" package.
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o MATH-1615: Remove class "StableRandomGenerator" (in package "o.a.c.m.legacy.random").
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o MATH-1614: Refactor "SimplexOptimizer" (in package "o.a.c.m.legacy.optim.nonlinear.scalar.noderiv").
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o MATH-1582: Transforms codes moved into a dedicated maven module.
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o MATH-1578: ANN codes moved into a dedicated maven module.
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o MATH-1575: Modularization set-up: All codes were moved into a "legacy" maven module.
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WIP: Functionalities should gradually be moved into dedicated modules.
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o MATH-1562: Add "Automatic-Module-Name" entry to JAR manifest file. Thanks to Frank Ulbricht.
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o MATH-1554: Remove package "o.a.c.math4.geometry".
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o MATH-1547: More flexible ranking of SOFM.
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o MATH-1530: "SplineInterpolator": Improved performance. Thanks to Yassine Damerdji.
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o MATH-1524: Code reuse. Thanks to Chen Tao.
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o MATH-1522: Remove generic parameter in clustering evaluator interfaces. Thanks to Chen Tao.
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o MATH-1523: Abstract class "ClusterEvaluator" replaced by an interface.
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o MATH-1408: Do not use exceptions for control flow
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o MATH-1362: Removed deprecated class "Incrementor" (replaced by "IntegerSequence.Incrementor").
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o MATH-1506: Removed class "MultidimensionalCounter" (ported to "Commons Numbers").
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o MATH-1504: Removed class "BigFraction" (ported to "Commons Numbers").
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o MATH-1446: Removed class "Fraction" (ported to "Commons Numbers").
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o MATH-1469: Removed most codes in package "o.a.c.m.geometry".
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"Commons Math" now depends on "Commons Geometry".
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o MATH-1481: "SobolSequenceGenerator": Update data file. Thanks to Théophile Charmont.
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o MATH-1389: Performance improvement for Array2DRowRealMatrix.getSubMatrix() Thanks to Christoph Dibak.
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o MATH-1377: "SimplexOptimizer": Slight performance improvement.
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o MATH-1318: "o.a.c.m.special.Gamma.digamma": Improved performance (through the use of
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the reflection formula for negative arguments). Thanks to Eric Prescott-Gagnon.
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o MATH-1305: "AbstractRandomGenerator" and "BitsStreamGenerator": Slight performance
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improvement of the "nextBytes" method (particularly when the number of
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requested bytes is a multiple of 4). Thanks to Rostislav Krasny.
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o MATH-853: "MathRuntimeException" is now the base class for all commons-math
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exceptions (except for "NullArgumentException" which extends
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"NullPointerException").
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o MATH-1205: The abstract class "AbstractStorelessUnivariateStatistic" does not
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extend anymore from "AbstractUnivariateStatistic".
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o MATH-1205: Default implementation of
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"AbstractStorelessUnivariateStatistic#equals(Object)"
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will only return true if both instances have the same type. Previously
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different statistics were considered to be equal if their current state
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happened to be equal.
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o MATH-1205: Default implementations of "AbstractStorelessUnivariateStatistic#evaluate(...)"
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do not alter the internal state anymore. Instead a temporary copy of
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the statistic is created for evaluation purposes.
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o MATH-1206: Added new API methods in "LeastSquaresProblem.Evaluation" (package
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"o.a.c.m.fitting.leastsquares").
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o MATH-1210: "QRDecomposition": include information about the condition that
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triggers a "SingularMatrixException".
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o MATH-757: Removed broken synchronization support in "ResizableDoubleArray".
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o MATH-869: "SpearmansCorrelation" will now throw an "MathIllegalArgumentException"
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if provided with a "NaturalRanking" instance that uses "REMOVED" as "NaNStrategy".
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o MATH-869: "NullArgumentException" extends now "java.lang.NullPointerException"
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instead of "MathIllegalArgumentException".
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o MATH-839: Renamed "cumulativeProbability(double, double)" to "probability(double, double)"
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in "IntegerDistribution" and "RealDistribution". Thanks to Gilles Sadowski.
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o MATH-1155: WELL type pseudo-random number generators have been refactored:
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the cached indirection index tables per instance are now stored
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in a static instance. This reduces the initialization cost when
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creating a new instance.
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o MATH-825: Method "LaguerreSolver#laguerre(...)" has been made private. Thanks to Gilles Sadowski.
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o MATH-760: Field "windowSize" in "DescriptiveStatistics" has been made private. Thanks to sebb.
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Removed:
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o MATH-1205: Removed methods "test(...)" from "AbstractUnivariateStatistic".
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The already existing methods "MathArrays#verifyValues(...)" shall
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be used instead.
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o MATH-1050: Removed "ArithmeticUtils#pow(int, long)" and "ArithmeticUtils#pow(long, long)".
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For complete information on Apache Commons Math, including instructions on how to submit bug reports,
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patches, or suggestions for improvement, see the Apache Commons Math website:
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http://commons.apache.org/proper/commons-math/
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4
pom.xml
4
pom.xml
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@ -25,7 +25,7 @@
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</parent>
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<artifactId>commons-math-parent</artifactId>
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<version>4.0-SNAPSHOT</version>
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<version>4.0-beta1</version>
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<packaging>pom</packaging>
|
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<name>Apache Commons Math</name>
|
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<description>
|
||||
|
|
@ -49,7 +49,7 @@
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<!-- This flag should only be true in the dist-archive module. -->
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<commons.release.isDistModule>false</commons.release.isDistModule>
|
||||
<!-- do not use snapshot suffix here -->
|
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<commons.release.version>4.0</commons.release.version>
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||||
<commons.release.version>4.0-beta1</commons.release.version>
|
||||
<commons.rc.version>RC1</commons.rc.version>
|
||||
<commons.release.desc>(requires Java 8+)</commons.release.desc>
|
||||
<commons.binary.suffix>-bin</commons.binary.suffix>
|
||||
|
|
|
|||
|
|
@ -55,7 +55,7 @@ If the output is not quite correct, check for invisible trailing spaces!
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|||
<release version="TBD" date="TBD" description="TBD">
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||||
</release>
|
||||
|
||||
<release version="4.0" date="XXXX-XX-XX" description="
|
||||
<release version="4.0-beta1" date="2022-12-20" description="
|
||||
This is a major release that requires source changes in applications.
|
||||
|
||||
Lower-level functionality has been split off to new components, often
|
||||
|
|
|
|||
|
|
@ -32,6 +32,8 @@
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|||
<item name="Overview" href="/index.html"/>
|
||||
<item name="Downloads" href="http://commons.apache.org/math/download_math.cgi"/>
|
||||
<item name="Latest API docs (development)" href="apidocs/index.html"/>
|
||||
<item name="Javadoc (4.0-beta1 release)"
|
||||
href="http://commons.apache.org/math/javadocs/api-4.0-beta1/index.html"/>
|
||||
<item name="Javadoc (3.6.1 release)"
|
||||
href="http://commons.apache.org/math/javadocs/api-3.6.1/index.html"/>
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||||
<item name="Javadoc (3.6 release)"
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||||
|
|
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|
@ -51,7 +51,7 @@ limitations under the License.
|
|||
| |
|
||||
| <properties> |
|
||||
| <commons.componentid>math</commons.componentid> |
|
||||
| <commons.release.version>1.3</commons.release.version> |
|
||||
| <commons.release.version>1.2</commons.release.version> |
|
||||
| </properties> |
|
||||
| |
|
||||
+======================================================================+
|
||||
|
|
@ -104,7 +104,7 @@ limitations under the License.
|
|||
It is essential that you
|
||||
<a href="https://www.apache.org/info/verification.html">verify the integrity</a>
|
||||
of downloaded files, preferably using the <code>PGP</code> signature (<code>*.asc</code> files);
|
||||
failing that using the <code>SHA256</code> hash (<code>*.sha256</code> checksum files).
|
||||
failing that using the <code>SHA512</code> hash (<code>*.sha512</code> checksum files).
|
||||
</p>
|
||||
<p>
|
||||
The <a href="https://www.apache.org/dist/commons/KEYS">KEYS</a>
|
||||
|
|
@ -113,32 +113,32 @@ limitations under the License.
|
|||
</p>
|
||||
</subsection>
|
||||
</section>
|
||||
<section name="Apache Commons Math 3.6.1 (requires Java 5+)">
|
||||
<section name="Apache Commons Math 4.0-beta1 (requires Java 8+)">
|
||||
<subsection name="Binaries">
|
||||
<table>
|
||||
<tr>
|
||||
<td><a href="[preferred]/commons/math/binaries/commons-math3-3.6.1-bin.tar.gz">commons-math3-3.6.1-bin.tar.gz</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math3-3.6.1-bin.tar.gz.sha256">sha256</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math3-3.6.1-bin.tar.gz.asc">pgp</a></td>
|
||||
<td><a href="[preferred]/commons/math/binaries/commons-math4-4.0-beta1-bin.tar.gz">commons-math4-4.0-beta1-bin.tar.gz</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math4-4.0-beta1-bin.tar.gz.sha512">sha512</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math4-4.0-beta1-bin.tar.gz.asc">pgp</a></td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td><a href="[preferred]/commons/math/binaries/commons-math3-3.6.1-bin.zip">commons-math3-3.6.1-bin.zip</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math3-3.6.1-bin.zip.sha256">sha256</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math3-3.6.1-bin.zip.asc">pgp</a></td>
|
||||
<td><a href="[preferred]/commons/math/binaries/commons-math4-4.0-beta1-bin.zip">commons-math4-4.0-beta1-bin.zip</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math4-4.0-beta1-bin.zip.sha512">sha512</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/binaries/commons-math4-4.0-beta1-bin.zip.asc">pgp</a></td>
|
||||
</tr>
|
||||
</table>
|
||||
</subsection>
|
||||
<subsection name="Source">
|
||||
<table>
|
||||
<tr>
|
||||
<td><a href="[preferred]/commons/math/source/commons-math3-3.6.1-src.tar.gz">commons-math3-3.6.1-src.tar.gz</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math3-3.6.1-src.tar.gz.sha256">sha256</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math3-3.6.1-src.tar.gz.asc">pgp</a></td>
|
||||
<td><a href="[preferred]/commons/math/source/commons-math4-4.0-beta1-src.tar.gz">commons-math4-4.0-beta1-src.tar.gz</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math4-4.0-beta1-src.tar.gz.sha512">sha512</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math4-4.0-beta1-src.tar.gz.asc">pgp</a></td>
|
||||
</tr>
|
||||
<tr>
|
||||
<td><a href="[preferred]/commons/math/source/commons-math3-3.6.1-src.zip">commons-math3-3.6.1-src.zip</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math3-3.6.1-src.zip.sha256">sha256</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math3-3.6.1-src.zip.asc">pgp</a></td>
|
||||
<td><a href="[preferred]/commons/math/source/commons-math4-4.0-beta1-src.zip">commons-math4-4.0-beta1-src.zip</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math4-4.0-beta1-src.zip.sha512">sha512</a></td>
|
||||
<td><a href="https://www.apache.org/dist/commons/math/source/commons-math4-4.0-beta1-src.zip.asc">pgp</a></td>
|
||||
</tr>
|
||||
</table>
|
||||
</subsection>
|
||||
|
|
|
|||
Loading…
Reference in New Issue