diff --git a/src/main/java/org/apache/commons/math/analysis/interpolation/LoessInterpolator.java b/src/main/java/org/apache/commons/math/analysis/interpolation/LoessInterpolator.java
index 3a8db5f3b..e7d52a080 100644
--- a/src/main/java/org/apache/commons/math/analysis/interpolation/LoessInterpolator.java
+++ b/src/main/java/org/apache/commons/math/analysis/interpolation/LoessInterpolator.java
@@ -47,7 +47,7 @@ public class LoessInterpolator
/** Default value of the number of robustness iterations. */
public static final int DEFAULT_ROBUSTNESS_ITERS = 2;
- /**
+ /**
* Default value for accuracy.
* @since 2.1
*/
diff --git a/src/main/java/org/apache/commons/math/analysis/solvers/BrentSolver.java b/src/main/java/org/apache/commons/math/analysis/solvers/BrentSolver.java
index a2a726e6e..83c0d91c5 100644
--- a/src/main/java/org/apache/commons/math/analysis/solvers/BrentSolver.java
+++ b/src/main/java/org/apache/commons/math/analysis/solvers/BrentSolver.java
@@ -32,10 +32,15 @@ import org.apache.commons.math.analysis.UnivariateRealFunction;
*/
public class BrentSolver extends UnivariateRealSolverImpl {
- /** Default absolute accuracy */
+ /**
+ * Default absolute accuracy
+ * @since 2.1
+ */
public static final double DEFAULT_ABSOLUTE_ACCURACY = 1E-6;
- /** Default maximum number of iterations */
+ /** Default maximum number of iterations
+ * @since 2.1
+ */
public static final int DEFAULT_MAXIMUM_ITERATIONS = 100;
/** Error message for non-bracketing interval. */
@@ -71,6 +76,7 @@ public class BrentSolver extends UnivariateRealSolverImpl {
* Construct a solver with the given absolute accuracy.
*
* @param absoluteAccuracy lower bound for absolute accuracy of solutions returned by the solver
+ * @since 2.1
*/
public BrentSolver(double absoluteAccuracy) {
super(DEFAULT_MAXIMUM_ITERATIONS, absoluteAccuracy);
@@ -81,6 +87,7 @@ public class BrentSolver extends UnivariateRealSolverImpl {
*
* @param maximumIterations maximum number of iterations
* @param absoluteAccuracy lower bound for absolute accuracy of solutions returned by the solver
+ * @since 2.1
*/
public BrentSolver(int maximumIterations, double absoluteAccuracy) {
super(maximumIterations, absoluteAccuracy);
diff --git a/src/main/java/org/apache/commons/math/distribution/AbstractContinuousDistribution.java b/src/main/java/org/apache/commons/math/distribution/AbstractContinuousDistribution.java
index 02bf8e8cb..2eec29804 100644
--- a/src/main/java/org/apache/commons/math/distribution/AbstractContinuousDistribution.java
+++ b/src/main/java/org/apache/commons/math/distribution/AbstractContinuousDistribution.java
@@ -40,7 +40,10 @@ public abstract class AbstractContinuousDistribution
/** Serializable version identifier */
private static final long serialVersionUID = -38038050983108802L;
- /** Solver absolute accuracy for inverse cum computation */
+ /**
+ * Solver absolute accuracy for inverse cum computation
+ * @since 2.1
+ */
private double solverAbsoluteAccuracy = BrentSolver.DEFAULT_ABSOLUTE_ACCURACY;
/**
@@ -55,6 +58,7 @@ public abstract class AbstractContinuousDistribution
* @param x The point at which the density should be computed.
* @return The pdf at point x.
* @throws MathRuntimeException if the specialized class hasn't implemented this function
+ * @since 2.1
*/
public double density(double x) throws MathRuntimeException {
throw new MathRuntimeException(new UnsupportedOperationException(),
@@ -166,6 +170,7 @@ public abstract class AbstractContinuousDistribution
* Returns the solver absolute accuracy for inverse cum computation.
*
* @return the maximum absolute error in inverse cumulative probability estimates
+ * @since 2.1
*/
protected double getSolverAbsoluteAccuracy() {
return solverAbsoluteAccuracy;
diff --git a/src/main/java/org/apache/commons/math/distribution/BetaDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/BetaDistributionImpl.java
index 9ec8e71f3..71ef66a8e 100644
--- a/src/main/java/org/apache/commons/math/distribution/BetaDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/BetaDistributionImpl.java
@@ -114,6 +114,7 @@ public class BetaDistributionImpl
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
public double density(double x) {
recomputeZ();
diff --git a/src/main/java/org/apache/commons/math/distribution/CauchyDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/CauchyDistributionImpl.java
index 200a5554b..96b0d0832 100644
--- a/src/main/java/org/apache/commons/math/distribution/CauchyDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/CauchyDistributionImpl.java
@@ -89,6 +89,7 @@ public class CauchyDistributionImpl extends AbstractContinuousDistribution
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
@Override
public double density(double x) {
diff --git a/src/main/java/org/apache/commons/math/distribution/ChiSquaredDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/ChiSquaredDistributionImpl.java
index 574177f7d..4822ddcbd 100644
--- a/src/main/java/org/apache/commons/math/distribution/ChiSquaredDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/ChiSquaredDistributionImpl.java
@@ -29,7 +29,10 @@ public class ChiSquaredDistributionImpl
extends AbstractContinuousDistribution
implements ChiSquaredDistribution, Serializable {
- /** Default inverse cumulative probability accuracy */
+ /**
+ * Default inverse cumulative probability accuracy
+ * @since 2.1
+ */
public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
/** Serializable version identifier */
@@ -71,6 +74,7 @@ public class ChiSquaredDistributionImpl
* @param df degrees of freedom.
* @param inverseCumAccuracy the maximum absolute error in inverse cumulative probability estimates
* (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY})
+ * @since 2.1
*/
public ChiSquaredDistributionImpl(double df, double inverseCumAccuracy) {
super();
@@ -120,6 +124,7 @@ public class ChiSquaredDistributionImpl
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
@Override
public double density(double x) {
@@ -257,6 +262,7 @@ public class ChiSquaredDistributionImpl
* inverse cumulative probabilities.
*
* @return the solver absolute accuracy
+ * @since 2.1
*/
@Override
protected double getSolverAbsoluteAccuracy() {
diff --git a/src/main/java/org/apache/commons/math/distribution/ExponentialDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/ExponentialDistributionImpl.java
index 0a20e31c9..54812206b 100644
--- a/src/main/java/org/apache/commons/math/distribution/ExponentialDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/ExponentialDistributionImpl.java
@@ -91,6 +91,7 @@ public class ExponentialDistributionImpl extends AbstractContinuousDistribution
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
@Override
public double density(double x) {
diff --git a/src/main/java/org/apache/commons/math/distribution/FDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/FDistributionImpl.java
index 447dab3f2..32fdb6e7b 100644
--- a/src/main/java/org/apache/commons/math/distribution/FDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/FDistributionImpl.java
@@ -32,7 +32,10 @@ public class FDistributionImpl
extends AbstractContinuousDistribution
implements FDistribution, Serializable {
- /** Default inverse cumulative probability accuracy */
+ /**
+ * Default inverse cumulative probability accurac
+ * @since 2.1
+ */
public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
/** Message for non positive degrees of freddom. */
@@ -67,6 +70,7 @@ public class FDistributionImpl
* @param denominatorDegreesOfFreedom the denominator degrees of freedom.
* @param inverseCumAccuracy the maximum absolute error in inverse cumulative probability estimates
* (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY})
+ * @since 2.1
*/
public FDistributionImpl(double numeratorDegreesOfFreedom, double denominatorDegreesOfFreedom,
double inverseCumAccuracy) {
@@ -81,6 +85,7 @@ public class FDistributionImpl
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
@Override
public double density(double x) {
@@ -269,6 +274,7 @@ public class FDistributionImpl
* inverse cumulative probabilities.
*
* @return the solver absolute accuracy
+ * @since 2.1
*/
@Override
protected double getSolverAbsoluteAccuracy() {
diff --git a/src/main/java/org/apache/commons/math/distribution/GammaDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/GammaDistributionImpl.java
index c8c23aa08..2dd5361ac 100644
--- a/src/main/java/org/apache/commons/math/distribution/GammaDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/GammaDistributionImpl.java
@@ -30,7 +30,10 @@ import org.apache.commons.math.special.Gamma;
public class GammaDistributionImpl extends AbstractContinuousDistribution
implements GammaDistribution, Serializable {
- /** Default inverse cumulative probability accuracy */
+ /**
+ * Default inverse cumulative probability accuracy
+ * @since 2.1
+ */
public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
/** Serializable version identifier */
@@ -60,6 +63,7 @@ public class GammaDistributionImpl extends AbstractContinuousDistribution
* @param beta the scale parameter.
* @param inverseCumAccuracy the maximum absolute error in inverse cumulative probability estimates
* (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY})
+ * @since 2.1
*/
public GammaDistributionImpl(double alpha, double beta, double inverseCumAccuracy) {
super();
@@ -285,6 +289,7 @@ public class GammaDistributionImpl extends AbstractContinuousDistribution
* inverse cumulative probabilities.
*
* @return the solver absolute accuracy
+ * @since 2.1
*/
@Override
protected double getSolverAbsoluteAccuracy() {
diff --git a/src/main/java/org/apache/commons/math/distribution/NormalDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/NormalDistributionImpl.java
index f4c09e35a..2faca5b76 100644
--- a/src/main/java/org/apache/commons/math/distribution/NormalDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/NormalDistributionImpl.java
@@ -33,7 +33,10 @@ import org.apache.commons.math.special.Erf;
public class NormalDistributionImpl extends AbstractContinuousDistribution
implements NormalDistribution, Serializable {
- /** Default inverse cumulative probability accuracy */
+ /**
+ * Default inverse cumulative probability accuracy
+ * @since 2.1
+ */
public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
/** Serializable version identifier */
@@ -67,6 +70,7 @@ public class NormalDistributionImpl extends AbstractContinuousDistribution
* @param mean mean for this distribution
* @param sd standard deviation for this distribution
* @param inverseCumAccuracy inverse cumulative probability accuracy
+ * @since 2.1
*/
public NormalDistributionImpl(double mean, double sd, double inverseCumAccuracy) {
super();
@@ -156,6 +160,7 @@ public class NormalDistributionImpl extends AbstractContinuousDistribution
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
public double density(double x) {
double x0 = x - mean;
@@ -190,6 +195,7 @@ public class NormalDistributionImpl extends AbstractContinuousDistribution
* inverse cumulative probabilities.
*
* @return the solver absolute accuracy
+ * @since 2.1
*/
@Override
protected double getSolverAbsoluteAccuracy() {
diff --git a/src/main/java/org/apache/commons/math/distribution/PoissonDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/PoissonDistributionImpl.java
index 9c8dc12a6..0329f80b1 100644
--- a/src/main/java/org/apache/commons/math/distribution/PoissonDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/PoissonDistributionImpl.java
@@ -33,11 +33,13 @@ public class PoissonDistributionImpl extends AbstractIntegerDistribution
/**
* Default maximum number of iterations for cumulative probability calculations.
+ * @since 2.1
*/
public static final int DEFAULT_MAX_ITERATIONS = 10000000;
/**
- * Default convergence criterion
+ * Default convergence criterion.
+ * @since 2.1
*/
public static final double DEFAULT_EPSILON = 1E-12;
@@ -83,6 +85,7 @@ public class PoissonDistributionImpl extends AbstractIntegerDistribution
* @param p the Poisson mean
* @param epsilon the convergence criteria for cumulative probabilites
* @param maxIterations the maximum number of iterations for cumulative probabilites
+ * @since 2.1
*/
public PoissonDistributionImpl(double p, double epsilon, int maxIterations) {
setMean(p);
@@ -95,6 +98,7 @@ public class PoissonDistributionImpl extends AbstractIntegerDistribution
*
* @param p the Poisson mean
* @param epsilon the convergence criteria for cumulative probabilites
+ * @since 2.1
*/
public PoissonDistributionImpl(double p, double epsilon) {
setMean(p);
@@ -106,6 +110,7 @@ public class PoissonDistributionImpl extends AbstractIntegerDistribution
*
* @param p the Poisson mean
* @param maxIterations the maximum number of iterations for cumulative probabilites
+ * @since 2.1
*/
public PoissonDistributionImpl(double p, int maxIterations) {
setMean(p);
diff --git a/src/main/java/org/apache/commons/math/distribution/TDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/TDistributionImpl.java
index f71cf7af9..4b6a083bf 100644
--- a/src/main/java/org/apache/commons/math/distribution/TDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/TDistributionImpl.java
@@ -33,7 +33,10 @@ public class TDistributionImpl
extends AbstractContinuousDistribution
implements TDistribution, Serializable {
- /** Default inverse cumulative probability accuracy */
+ /**
+ * Default inverse cumulative probability accuracy
+ * @since 2.1
+ */
public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
/** Serializable version identifier */
@@ -52,6 +55,7 @@ public class TDistributionImpl
* @param degreesOfFreedom the degrees of freedom.
* @param inverseCumAccuracy the maximum absolute error in inverse cumulative probability estimates
* (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY})
+ * @since 2.1
*/
public TDistributionImpl(double degreesOfFreedom, double inverseCumAccuracy) {
super();
@@ -102,6 +106,7 @@ public class TDistributionImpl
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
@Override
public double density(double x) {
@@ -210,6 +215,7 @@ public class TDistributionImpl
* inverse cumulative probabilities.
*
* @return the solver absolute accuracy
+ * @since 2.1
*/
@Override
protected double getSolverAbsoluteAccuracy() {
diff --git a/src/main/java/org/apache/commons/math/distribution/WeibullDistributionImpl.java b/src/main/java/org/apache/commons/math/distribution/WeibullDistributionImpl.java
index 73d4b5c50..d63b9757b 100644
--- a/src/main/java/org/apache/commons/math/distribution/WeibullDistributionImpl.java
+++ b/src/main/java/org/apache/commons/math/distribution/WeibullDistributionImpl.java
@@ -31,7 +31,10 @@ import org.apache.commons.math.MathRuntimeException;
public class WeibullDistributionImpl extends AbstractContinuousDistribution
implements WeibullDistribution, Serializable {
- /** Default inverse cumulative probability accuracy */
+ /**
+ * Default inverse cumulative probability accuracy
+ * @since 2.1
+ */
public static final double DEFAULT_INVERSE_ABSOLUTE_ACCURACY = 1e-9;
/** Serializable version identifier */
@@ -63,6 +66,7 @@ public class WeibullDistributionImpl extends AbstractContinuousDistribution
* @param beta the scale parameter.
* @param inverseCumAccuracy the maximum absolute error in inverse cumulative probability estimates
* (defaults to {@link #DEFAULT_INVERSE_ABSOLUTE_ACCURACY})
+ * @since 2.1
*/
public WeibullDistributionImpl(double alpha, double beta, double inverseCumAccuracy){
super();
@@ -107,6 +111,7 @@ public class WeibullDistributionImpl extends AbstractContinuousDistribution
*
* @param x The point at which the density should be computed.
* @return The pdf at point x.
+ * @since 2.1
*/
@Override
public double density(double x) {
@@ -246,6 +251,7 @@ public class WeibullDistributionImpl extends AbstractContinuousDistribution
* inverse cumulative probabilities.
*
* @return the solver absolute accuracy
+ * @since 2.1
*/
@Override
protected double getSolverAbsoluteAccuracy() {
diff --git a/src/main/java/org/apache/commons/math/genetics/GeneticAlgorithm.java b/src/main/java/org/apache/commons/math/genetics/GeneticAlgorithm.java
index 3d81ba360..91eed9f0d 100644
--- a/src/main/java/org/apache/commons/math/genetics/GeneticAlgorithm.java
+++ b/src/main/java/org/apache/commons/math/genetics/GeneticAlgorithm.java
@@ -219,6 +219,7 @@ public class GeneticAlgorithm {
* reach {@link StoppingCondition} in the last run.
*
* @return number of generations evolved
+ * @since 2.1
*/
public int getGenerationsEvolved() {
return generationsEvolved;
diff --git a/src/main/java/org/apache/commons/math/linear/OpenMapRealVector.java b/src/main/java/org/apache/commons/math/linear/OpenMapRealVector.java
index fe7a6ca9e..a36f9b2d0 100644
--- a/src/main/java/org/apache/commons/math/linear/OpenMapRealVector.java
+++ b/src/main/java/org/apache/commons/math/linear/OpenMapRealVector.java
@@ -200,6 +200,7 @@ public class OpenMapRealVector extends AbstractRealVector implements SparseRealV
* Determine if this value is within epsilon of zero.
* @param value The value to test
* @return true
if this value is within epsilon to zero, false
otherwise
+ * @since 2.1
*/
protected boolean isDefaultValue(double value) {
return Math.abs(value) < epsilon;
@@ -279,7 +280,10 @@ public class OpenMapRealVector extends AbstractRealVector implements SparseRealV
return res;
}
- /** {@inheritDoc} */
+ /**
+ * {@inheritDoc}
+ * @since 2.1
+ */
@Override
public OpenMapRealVector copy() {
return new OpenMapRealVector(this);
diff --git a/src/main/java/org/apache/commons/math/optimization/general/AbstractLeastSquaresOptimizer.java b/src/main/java/org/apache/commons/math/optimization/general/AbstractLeastSquaresOptimizer.java
index 2e30124a5..0935d53db 100644
--- a/src/main/java/org/apache/commons/math/optimization/general/AbstractLeastSquaresOptimizer.java
+++ b/src/main/java/org/apache/commons/math/optimization/general/AbstractLeastSquaresOptimizer.java
@@ -63,10 +63,16 @@ public abstract class AbstractLeastSquaresOptimizer implements DifferentiableMul
/** Number of rows of the jacobian matrix. */
protected int rows;
- /** Target value for the objective functions at optimum. */
+ /**
+ * Target value for the objective functions at optimum.
+ * @since 2.1
+ */
protected double[] targetValues;
- /** Weight for the least squares cost computation. */
+ /**
+ * Weight for the least squares cost computation.
+ * @since 2.1
+ */
protected double[] residualsWeights;
/** Current point. */
diff --git a/src/main/java/org/apache/commons/math/optimization/general/AbstractScalarDifferentiableOptimizer.java b/src/main/java/org/apache/commons/math/optimization/general/AbstractScalarDifferentiableOptimizer.java
index 3daec7132..64281d6f0 100644
--- a/src/main/java/org/apache/commons/math/optimization/general/AbstractScalarDifferentiableOptimizer.java
+++ b/src/main/java/org/apache/commons/math/optimization/general/AbstractScalarDifferentiableOptimizer.java
@@ -45,7 +45,10 @@ public abstract class AbstractScalarDifferentiableOptimizer
/** Convergence checker. */
protected RealConvergenceChecker checker;
- /** Type of optimization. */
+ /**
+ * Type of optimization.
+ * @since 2.1
+ */
protected GoalType goal;
/** Current point set. */
diff --git a/src/main/java/org/apache/commons/math/optimization/linear/AbstractLinearOptimizer.java b/src/main/java/org/apache/commons/math/optimization/linear/AbstractLinearOptimizer.java
index 06704bdc3..c043e100f 100644
--- a/src/main/java/org/apache/commons/math/optimization/linear/AbstractLinearOptimizer.java
+++ b/src/main/java/org/apache/commons/math/optimization/linear/AbstractLinearOptimizer.java
@@ -37,16 +37,28 @@ public abstract class AbstractLinearOptimizer implements LinearOptimizer {
/** Default maximal number of iterations allowed. */
public static final int DEFAULT_MAX_ITERATIONS = 100;
- /** Linear objective function. */
+ /**
+ * Linear objective function.
+ * @since 2.1
+ */
protected LinearObjectiveFunction function;
- /** Linear constraints. */
+ /**
+ * Linear constraints.
+ * @since 2.1
+ */
protected Collection