Phil Steitz
d393072e58
Fixed javadoc typos.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1043908 13f79535-47bb-0310-9956-ffa450edef68
2010-12-09 11:53:14 +00:00
Sebastian Bazley
5d2b33bd45
Update Clirr to 2.2.3
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1043411 13f79535-47bb-0310-9956-ffa450edef68
2010-12-08 13:37:46 +00:00
Gilles Sadowski
5a9079f2ec
MATH-454
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Pass the number of allowed function evaluations as a parameter to the
"optimize" methods.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1043078 13f79535-47bb-0310-9956-ffa450edef68
2010-12-07 15:01:37 +00:00
Gilles Sadowski
142d2c918a
MATH-438
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Removed deprecated methods.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1043075 13f79535-47bb-0310-9956-ffa450edef68
2010-12-07 14:58:08 +00:00
Gilles Sadowski
34c5d96df7
MATH-425
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1043066 13f79535-47bb-0310-9956-ffa450edef68
2010-12-07 14:40:16 +00:00
Gilles Sadowski
d54330b9bc
MATH-452
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Made all static variables (accuracies) "private".
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042596 13f79535-47bb-0310-9956-ffa450edef68
2010-12-06 11:56:26 +00:00
Sebastian Bazley
71d916f096
Javadoc typos
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042513 13f79535-47bb-0310-9956-ffa450edef68
2010-12-06 02:10:44 +00:00
Sebastian Bazley
47de37f805
Add missing @Deprecated annotation
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042512 13f79535-47bb-0310-9956-ffa450edef68
2010-12-06 02:08:01 +00:00
Sebastian Bazley
bef875a3ba
Unused
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042511 13f79535-47bb-0310-9956-ffa450edef68
2010-12-06 02:07:10 +00:00
Gilles Sadowski
92938b610a
MATH-451
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Removed the "solve" methods lacking the "maxEval" parameter.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042502 13f79535-47bb-0310-9956-ffa450edef68
2010-12-06 00:53:59 +00:00
Sebastian Bazley
e58d65df4e
Remove unnecessary throws clauses from testxxx methods
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042428 13f79535-47bb-0310-9956-ffa450edef68
2010-12-05 19:37:55 +00:00
Sebastian Bazley
c3ba9b395e
Unnecessary casts
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042425 13f79535-47bb-0310-9956-ffa450edef68
2010-12-05 19:28:17 +00:00
Sebastian Bazley
7360926beb
Unused imports
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042424 13f79535-47bb-0310-9956-ffa450edef68
2010-12-05 19:27:21 +00:00
Sebastian Bazley
fa4b8869dc
Add missing @Deprecated annotation
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042423 13f79535-47bb-0310-9956-ffa450edef68
2010-12-05 19:27:02 +00:00
Sebastian Bazley
52e8a34e72
StringBuffer => StringBuilder for local variables
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042422 13f79535-47bb-0310-9956-ffa450edef68
2010-12-05 19:25:21 +00:00
Gilles Sadowski
4d4aa195fe
MATH-451
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In solvers, the maximum number of evaluations is passed as a parameter to the
method "solve". The "setMaxEvaluations" accessor is removed.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1042151 13f79535-47bb-0310-9956-ffa450edef68
2010-12-04 11:31:12 +00:00
Gilles Sadowski
848c37ee8b
MATH-439
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Removed deprecated class (superseded by "AbstractUnivariateRealSolver")..
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1041225 13f79535-47bb-0310-9956-ffa450edef68
2010-12-02 00:15:18 +00:00
Gilles Sadowski
25ac524b79
MATH-425
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Remplaced deprecated code.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1041216 13f79535-47bb-0310-9956-ffa450edef68
2010-12-01 23:58:43 +00:00
Gilles Sadowski
030fff9a45
Test added.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1041214 13f79535-47bb-0310-9956-ffa450edef68
2010-12-01 23:56:07 +00:00
Phil Steitz
3d3af2cfde
Replaced deprecated MaximumIterationsExceededException by MaxCountExceededException. JIRA: MATH-438.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1040868 13f79535-47bb-0310-9956-ffa450edef68
2010-12-01 03:43:20 +00:00
Gilles Sadowski
d951c7028d
MATH-447
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New "MathRuntimeException" base class.
"MathUserException" shares the same functionality (and thus is made a subclass
of the former).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1040818 13f79535-47bb-0310-9956-ffa450edef68
2010-11-30 22:57:14 +00:00
Phil Steitz
5fe9b36c45
Modified NormalDistributionImpl.cumulativeProbability to return 0 or 1,
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respectively for values more than 40 standard deviations from the mean.
For these values, the actual probability is indistinguishable from 0 or 1
as a double. Top coding improves performance for extreme values and prevents
convergence exceptions.
JIRA: MATH-414
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1040471 13f79535-47bb-0310-9956-ffa450edef68
2010-11-30 11:55:22 +00:00
Gilles Sadowski
0615bf8dc0
Added "vararg" parameter to allow "specific" meessage patterns to make use
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of additional information.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1040003 13f79535-47bb-0310-9956-ffa450edef68
2010-11-29 01:43:12 +00:00
Phil Steitz
c49cd8fa29
Fixed javadoc typo.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039982 13f79535-47bb-0310-9956-ffa450edef68
2010-11-28 23:52:45 +00:00
Phil Steitz
da07b0aed6
Removed JDK 1.5-incompatible annotations.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039507 13f79535-47bb-0310-9956-ffa450edef68
2010-11-26 18:48:44 +00:00
Gilles Sadowski
f101eb4c2a
MATH-430
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Removed deprecated classes "ComposableFunction" and "BinaryFunction".
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039465 13f79535-47bb-0310-9956-ffa450edef68
2010-11-26 17:02:26 +00:00
Gilles Sadowski
30fd555f27
MATH-430
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Removed uses of deprecated "BinaryFunction" class.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039459 13f79535-47bb-0310-9956-ffa450edef68
2010-11-26 16:50:31 +00:00
Gilles Sadowski
215cebe8df
MATH-430
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Removed uses of deprecated "BinaryFunction" class.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039450 13f79535-47bb-0310-9956-ffa450edef68
2010-11-26 16:35:12 +00:00
Gilles Sadowski
ae78e16c8b
MATH-430
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Removed redundant "mapXxx" methods.
Upgraded tests to Junit4 (MATH-423).
Some test used "assertEquals" without a tolerance (strict equality between
floating point numbers); this failed with Junit4.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039411 13f79535-47bb-0310-9956-ffa450edef68
2010-11-26 15:24:28 +00:00
Gilles Sadowski
44eff7b3e8
MATH-430
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Deprecated redundant methods in "RealVector" and "AbstractRealVector" (in
package "linear").
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039315 13f79535-47bb-0310-9956-ffa450edef68
2010-11-26 11:27:49 +00:00
Phil Steitz
60f2c6d5f4
Updated changelog for JIRA: MATH-420 (should have been included in r1038873).
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039139 13f79535-47bb-0310-9956-ffa450edef68
2010-11-25 18:49:47 +00:00
Gilles Sadowski
b6e6100a5c
Added reference to issue MATH-439.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039087 13f79535-47bb-0310-9956-ffa450edef68
2010-11-25 16:30:07 +00:00
Gilles Sadowski
b9559bfce9
MATH-439
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Refactored the "solvers" package. Implementations refer to number of
evaluation of the objective function (instead of the number of iterations).
New interfaces and base classes.
"NewtonSolver" fits in the design without resorting to a cast.
Created class "MullerSolver2" to contain the code of the method named "solve2"
in class "MullerSolver".
Removed "UnivariateRealSolverFactory" and "UnivariateRealSolverFactoryImpl".
Default solver in "UnivariateRealSolverUtils" is explicitely instantiated.
"AbstractContinuousDistribution": Type of exception thrown changed in
"UnivariateRealSolverUtils".
Factored out duplicate code (in "GaussNewtonOptimizerTest" and
"LevenbergMarquardtOptimizerTest"): class "Circle" is now called
"CircleVectorial". Also factored out the "Circle" class from
"NonLinearConjugateGradientOptimizerTest": class is named "CircleScalar".
Created "SecantSolverTest", moving there all the tests for the class
"SecantSolver" that were located in class "BrentSolverTest".
Created new interface and base class for polynomial functions solvers
("LaguerreSolver") so that the function type is now checked at compile time.
Removed deprecated exceptions (MATH-441).
Javadoc clean-up.
Lowered tolerance values in some unit tests.
Tests upgraded to Junit 4 (MATH-423).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1039083 13f79535-47bb-0310-9956-ffa450edef68
2010-11-25 16:22:00 +00:00
Phil Steitz
c32b8042d8
Added toString() override to StatistictalSummaryValues. JIRA: MATH-420.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1038873 13f79535-47bb-0310-9956-ffa450edef68
2010-11-24 23:35:13 +00:00
Gilles Sadowski
0b3c388aeb
MATH-425
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Removed redundant exception "throws" clauses.
Javadoc cleanup.
Throwing "NoDataException" instead of "ZeroException" when row or column
data is missing.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1038403 13f79535-47bb-0310-9956-ffa450edef68
2010-11-24 00:42:12 +00:00
Gilles Sadowski
b1676aecb4
MATH-430
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New package "function" contains univariate and bivariate function objects.
"FunctionUtils" contains methods to compose and combine function objects.
Together they replace "ComposableFunction" and "BinaryFunction" which are
now deprecated.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1037896 13f79535-47bb-0310-9956-ffa450edef68
2010-11-22 21:29:49 +00:00
Gilles Sadowski
cbea7bad84
Removed unnecessary "try/catch" statements.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1037468 13f79535-47bb-0310-9956-ffa450edef68
2010-11-21 14:20:24 +00:00
Gilles Sadowski
b4129de756
Refined test (follow-up of MATH-441).
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1037372 13f79535-47bb-0310-9956-ffa450edef68
2010-11-21 02:36:14 +00:00
Luc Maisonobe
22d63af83d
removed the ode.jacobians package
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Jira: MATH-380
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1037343 13f79535-47bb-0310-9956-ffa450edef68
2010-11-20 22:02:55 +00:00
Luc Maisonobe
3859aa17cf
Added a normalization feature to transform samples so they have zero mean and unit standard deviation
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Jira: MATH-426
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1037333 13f79535-47bb-0310-9956-ffa450edef68
2010-11-20 21:31:44 +00:00
Luc Maisonobe
4f05aa7d18
removed FunctionEvaluationException, DerivativeException and MatrixVisitorException
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these exception were deprecated in 2.2 and a smooth transition path was set up to help users, now all user functions should use the new unchecked MathUserException
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1037328 13f79535-47bb-0310-9956-ffa450edef68
2010-11-20 21:01:50 +00:00
Luc Maisonobe
f2d9bc8f93
added back some features from old exception scheme (accessors for patterns and arguments) to the new scheme
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this should ease transition for existing user code
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035476 13f79535-47bb-0310-9956-ffa450edef68
2010-11-15 22:39:56 +00:00
Luc Maisonobe
e5413fd483
added new constructors to MathUserException to provide more control to user
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035419 13f79535-47bb-0310-9956-ffa450edef68
2010-11-15 19:39:53 +00:00
Gilles Sadowski
0d52bf6394
MATH-441
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Implemented proposed solution (rethrow last exception if no optimum were found).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035245 13f79535-47bb-0310-9956-ffa450edef68
2010-11-15 12:22:47 +00:00
Luc Maisonobe
65e95d0224
reverting change introduced in 1035003:
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it was the javadoc that did not correspond to the intended behavior, not the code
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035072 13f79535-47bb-0310-9956-ffa450edef68
2010-11-14 21:32:08 +00:00
Luc Maisonobe
318d66e1b1
allow either specific or generic formats to be null
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035009 13f79535-47bb-0310-9956-ffa450edef68
2010-11-14 15:32:48 +00:00
Luc Maisonobe
183ad3388d
fixed message building so the behavior matches the existing javadoc:
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general arguments are the ones remaining after the specific ones have been handled
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035003 13f79535-47bb-0310-9956-ffa450edef68
2010-11-14 15:06:11 +00:00
Luc Maisonobe
07cd6619e0
typo
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1035002 13f79535-47bb-0310-9956-ffa450edef68
2010-11-14 15:04:51 +00:00
Gilles Sadowski
3f353cbde4
MATH-441
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Removed occurences of "FunctionEvaluationException".
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1034996 13f79535-47bb-0310-9956-ffa450edef68
2010-11-14 13:41:13 +00:00
Gilles Sadowski
77c4e2f0c6
MATH-440
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Deprecation.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1034995 13f79535-47bb-0310-9956-ffa450edef68
2010-11-14 13:33:16 +00:00