Commit Graph

1560 Commits

Author SHA1 Message Date
Luc Maisonobe 3a751b5acf removed unneeded multiplications by zero by separating
the first iteration from the following ones in a loop

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@701852 13f79535-47bb-0310-9956-ffa450edef68
2008-10-05 19:12:05 +00:00
Luc Maisonobe f0aeb29d16 replaced an intermediate variable by its opposite for easier to read expression
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@701846 13f79535-47bb-0310-9956-ffa450edef68
2008-10-05 18:53:18 +00:00
Luc Maisonobe fcb63bbdac added a test ensuring the part of the symmetric matrix below the diagonal is never used
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@701810 13f79535-47bb-0310-9956-ffa450edef68
2008-10-05 15:37:02 +00:00
Luc Maisonobe 50f694b7a0 improved javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@701809 13f79535-47bb-0310-9956-ffa450edef68
2008-10-05 15:36:20 +00:00
Luc Maisonobe 4f7ede1974 fixed typo
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@701642 13f79535-47bb-0310-9956-ffa450edef68
2008-10-04 13:43:57 +00:00
Luc Maisonobe 7d5ea6a074 added interfaces for eigen decomposition and for singular value decomposition
the implementation for this interfaces is not ready yet, but it seems
important to show what the interface will look like.
JIRA: MATH-220

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@700492 13f79535-47bb-0310-9956-ffa450edef68
2008-09-30 15:09:17 +00:00
Luc Maisonobe 94f1e9e013 improved javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@700491 13f79535-47bb-0310-9956-ffa450edef68
2008-09-30 15:05:10 +00:00
Luc Maisonobe e95b705442 updated userguide after deprecation of internal LU decomposition in linear algebra
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@700367 13f79535-47bb-0310-9956-ffa450edef68
2008-09-30 07:15:05 +00:00
Luc Maisonobe bfea325efd added a transformer from symmetric matrix to tri-diagonal matrix
(this is only for internal purposes only yet, it will be used later)

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@700272 13f79535-47bb-0310-9956-ffa450edef68
2008-09-29 21:47:41 +00:00
Luc Maisonobe 58e8113ee0 fixed indentation (sorry)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699857 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 16:31:33 +00:00
Luc Maisonobe a83b792eb0 fixed an matrix mismatch error
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699855 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 16:28:50 +00:00
Luc Maisonobe 8260edaaf6 added a getQT() method to QRDecomposition interface
compute Q by transposing QT rather than the other way round for efficiency
JIRA: MATH-223

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699850 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 16:17:41 +00:00
Luc Maisonobe 19a6674a57 slight optimization:
cached pointers to row vectors from double arrays
wherever the same row was used in a loop, to avoid
double index computation/range check

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699846 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 15:59:14 +00:00
Luc Maisonobe 670ebf6f93 Replaced internal LU-decomposition by the external class.
Deprecated the direct call to these methods as users should
really be able to choose the type of solver they want.
LU-decomposition is only one possibility among others like
QR-decomposition.

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699845 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 15:55:15 +00:00
Luc Maisonobe d3f7151590 pulled some solve-related methods higher in the classes hierarchy
(isNonSinglular(), getInverse())

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699844 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 15:51:47 +00:00
Phil Steitz 44e04f2a0a Fixed error in javadoc added in r699704
JIRA: MATH-207




git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699762 13f79535-47bb-0310-9956-ffa450edef68
2008-09-28 02:07:19 +00:00
Phil Steitz 6460cd272a Eliminated the "mutation requirement" in nextGeneration method.
Added algorithm description in javadoc.
JIRA: MATH-207
Reported and patched by David Stefka




git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699704 13f79535-47bb-0310-9956-ffa450edef68
2008-09-27 18:05:19 +00:00
Luc Maisonobe dbd8ffb54f propagated trunk changes from r699157 into branch 2.0
MATH-227.  fixed F distribution inverse CDF computation for small denominator degrees of freedom.

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@699468 13f79535-47bb-0310-9956-ffa450edef68
2008-09-26 19:51:13 +00:00
Brent Worden 57e0c33a52 MATH-227. fixed F distribution inverse CDF computation for small denominator degrees of freedom.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@699157 13f79535-47bb-0310-9956-ffa450edef68
2008-09-26 03:09:53 +00:00
Luc Maisonobe e1e21f2f68 Fixed an error in CorrelatedRandomVectorGenerator leading to a component of the generated vector being constant
JIRA: MATH-226

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@696054 13f79535-47bb-0310-9956-ffa450edef68
2008-09-16 21:00:28 +00:00
Luc Maisonobe 7684119c58 Greatly improved QR-decomposition speed using transposed matrices internally
JIRA: MATH-223

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@695251 13f79535-47bb-0310-9956-ffa450edef68
2008-09-14 16:38:11 +00:00
Luc Maisonobe f4c984a31b Fixed an infinite loop encountered in some backward integration cases for ODE solvers
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@694197 13f79535-47bb-0310-9956-ffa450edef68
2008-09-11 09:57:11 +00:00
Luc Maisonobe 81c6a9a29d added beta distribution
JIRA: MATH-222

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@693959 13f79535-47bb-0310-9956-ffa450edef68
2008-09-10 19:55:08 +00:00
Luc Maisonobe 0420458997 distribution factory was removed after 1.2 release
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@693957 13f79535-47bb-0310-9956-ffa450edef68
2008-09-10 19:53:40 +00:00
Luc Maisonobe f125ff3ce2 fixed typo
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@693862 13f79535-47bb-0310-9956-ffa450edef68
2008-09-10 14:51:12 +00:00
Luc Maisonobe dc2767c461 added Ted Dunning to the list of contributors (for probability density functions)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@693607 13f79535-47bb-0310-9956-ffa450edef68
2008-09-09 20:59:01 +00:00
Luc Maisonobe e8a6f1a76c Added probability density functions computation for distributions for which it is feasible
JIRA: MATH-222

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@693598 13f79535-47bb-0310-9956-ffa450edef68
2008-09-09 20:37:08 +00:00
Luc Maisonobe 66759ef52a added matrix transformer to bi-diagonal shape
(for later use by singular value decomposition)

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@691551 13f79535-47bb-0310-9956-ffa450edef68
2008-09-03 09:18:29 +00:00
Luc Maisonobe 60cd425556 typos
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@690941 13f79535-47bb-0310-9956-ffa450edef68
2008-09-01 11:42:08 +00:00
Luc Maisonobe fb17113403 removed spurious throws clause
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@690934 13f79535-47bb-0310-9956-ffa450edef68
2008-09-01 10:42:28 +00:00
Luc Maisonobe 481a091105 added a decompose method to the base DecompositionSolver interface
to allow a solver to decompose a matrix after construction.

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@690803 13f79535-47bb-0310-9956-ffa450edef68
2008-08-31 22:28:55 +00:00
Luc Maisonobe c1f2e60e81 Changed the equals() methods from RealMatrixImpl, RealVectorImpl and Vector3D
so that they consider +0 and -0 are equal, as required by IEEE-754 standard.
These were bugs similar to MATH-221 for Complex.

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@690314 13f79535-47bb-0310-9956-ffa450edef68
2008-08-29 16:17:33 +00:00
Luc Maisonobe 94cf29c4e3 Changed the Complex.equals() method so that it considers +0 and -0 are equal,
as required by IEEE-754 standard.
JIRA: MATH-221

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@690308 13f79535-47bb-0310-9956-ffa450edef68
2008-08-29 15:46:22 +00:00
Luc Maisonobe a48a97b37f added JAMA-like LU-decomposition
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@687519 13f79535-47bb-0310-9956-ffa450edef68
2008-08-21 00:19:48 +00:00
Niall Pemberton 3c72402b42 Upgrade to latest clirr plugin version 2.2.2 (fixes problem downloading the old artifact from the repo)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@687302 13f79535-47bb-0310-9956-ffa450edef68
2008-08-20 12:56:47 +00:00
Niall Pemberton 7f35915afd Upgrade to latest clirr plugin version 2.2.2 (fixes problem downloading the old artifact from the repo)
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@687301 13f79535-47bb-0310-9956-ffa450edef68
2008-08-20 12:56:25 +00:00
Luc Maisonobe 3dd6fe1807 Started work on JAMA-like interfaces.
This first step is an enhancement of the existing QR-decomposition interface and associated implementation in JAMA-style, i.e with added getH() method and most importantly various solve methods for least-squares solution of the A * X = B equation.
JIRA: MATH-220

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@687167 13f79535-47bb-0310-9956-ffa450edef68
2008-08-19 21:41:17 +00:00
Luc Maisonobe 07e312f0c3 added removeData methods to the SimpleRegression class.
This allows to support regression calculations across a
sliding window of (time-based) observations without having
to recalculate for the entire window every time.
JIRA: MATH-219

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@687021 13f79535-47bb-0310-9956-ffa450edef68
2008-08-19 11:18:10 +00:00
Luc Maisonobe be008314f3 fixed typo
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@683434 13f79535-47bb-0310-9956-ffa450edef68
2008-08-06 22:38:28 +00:00
Luc Maisonobe 9d3b1d2f16 added createRealVector for consistency with Matrix factory methods
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@682190 13f79535-47bb-0310-9956-ffa450edef68
2008-08-03 16:12:48 +00:00
Luc Maisonobe 2e82f1fcdc Support for one dimensional vectors has been added to the linear algebra
package with a RealVector interface, a RealVectorImpl default implementation
using a single double array to store elements and a RealVectorFormat class for
input/output.

git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680172 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 19:48:17 +00:00
Luc Maisonobe b47b287663 Support for one dimensional vectors has been added to the linear algebra
package with a RealVector interface, a RealVectorImpl default implementation
using a single double array to store elements and a RealVectorFormat class for
input/output.


git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680166 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 19:15:22 +00:00
Phil Steitz 6ef68ad4a9 Javadoc fixes.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680165 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 19:11:33 +00:00
Phil Steitz a77322c262 Changed OLSMultipleLinearRegression implementation to use QR decomposition to
solve the normal equations.
JIRA: MATH-217



git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680162 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 18:52:38 +00:00
Luc Maisonobe 38f83e6070 updated minimum java version required
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680144 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 16:28:43 +00:00
Luc Maisonobe c7c19df2da improved explanation of NaN coordinates
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680123 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 15:17:37 +00:00
Luc Maisonobe 8560c231d5 fixed javadoc
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680121 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 15:11:43 +00:00
Luc Maisonobe 083f748403 fixed javadoc comments pasted from ComplexFormat without care
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680113 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 14:34:37 +00:00
Luc Maisonobe 3a8e7620e3 fixed typo
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680111 13f79535-47bb-0310-9956-ffa450edef68
2008-07-27 14:30:43 +00:00
Luc Maisonobe a7cd35389d reverting a return type changed inadvertently
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/branches/MATH_2_0@680036 13f79535-47bb-0310-9956-ffa450edef68
2008-07-26 20:00:29 +00:00