Luc Maisonobe
9853e1ba0c
Added setters allowing to change the step size control parameters of adaptive step size ODE integrators
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Jira: MATH-563
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1096443 13f79535-47bb-0310-9956-ffa450edef68
2011-04-25 09:45:49 +00:00
Luc Maisonobe
3bfed2129c
Fixed misleading javadoc, the user supplied min and max step size are internally forced to positive and integration direction is handled later on. Asking for a positive step size was superfluous.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1096440 13f79535-47bb-0310-9956-ffa450edef68
2011-04-25 09:23:30 +00:00
Gilles Sadowski
00e957d447
Added (trivial) tests for NaNs.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1092402 13f79535-47bb-0310-9956-ffa450edef68
2011-04-14 17:37:36 +00:00
Luc Maisonobe
2bc9b4b4d1
removed obsolete field
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091526 13f79535-47bb-0310-9956-ffa450edef68
2011-04-12 18:07:42 +00:00
Gilles Sadowski
fc409e886d
MATH-559
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Removed "assert" statements.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091378 13f79535-47bb-0310-9956-ffa450edef68
2011-04-12 11:46:20 +00:00
Gilles Sadowski
47e0ef5d2e
Trailing spaces.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091376 13f79535-47bb-0310-9956-ffa450edef68
2011-04-12 11:29:02 +00:00
Gilles Sadowski
4f1c54a445
Javadoc.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091358 13f79535-47bb-0310-9956-ffa450edef68
2011-04-12 10:04:32 +00:00
Gilles Sadowski
3fa068440f
Simplified test.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091346 13f79535-47bb-0310-9956-ffa450edef68
2011-04-12 09:41:02 +00:00
Luc Maisonobe
402279e151
make sure the test runs correctly even in a non-US environment
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091153 13f79535-47bb-0310-9956-ffa450edef68
2011-04-11 18:02:52 +00:00
Luc Maisonobe
f69fd48e53
replaced remaining getEpsilon by using ulps in double comparisons
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1091143 13f79535-47bb-0310-9956-ffa450edef68
2011-04-11 17:43:40 +00:00
Luc Maisonobe
b278d97dce
replaced the custom comparison method in SimplexSolver with the new MathUtils.compareTo(double, double, int) with maxUlps as the third parameter, as per Gilles advice.
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Jira: MATH-434
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1090823 13f79535-47bb-0310-9956-ffa450edef68
2011-04-10 16:00:56 +00:00
Luc Maisonobe
13e5edb1b9
Added a compareTo method to MathUtils that uses a number of ulps as a tolerance error, and works well on all numbers, including normals, subnormals, signed zeroes, infinities and NaNs
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Jira: MATH-557
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1090820 13f79535-47bb-0310-9956-ffa450edef68
2011-04-10 15:56:51 +00:00
Luc Maisonobe
133cbc2dbf
Fixed two errors in simplex solver when entries are close together or
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when variables are not restricted to non-negative.
Jira: MATH-434
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1090656 13f79535-47bb-0310-9956-ffa450edef68
2011-04-09 19:20:47 +00:00
Gilles Sadowski
a3c552e324
Wrong chaining of constructors made the interesting message (indicating the maximal
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count) disappear.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1089891 13f79535-47bb-0310-9956-ffa450edef68
2011-04-07 14:33:08 +00:00
Phil Steitz
3c3c66c84f
Changed to use, rathern than duplicate Realmatrix Frobenius norm.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088902 13f79535-47bb-0310-9956-ffa450edef68
2011-04-05 05:52:21 +00:00
Phil Steitz
d30be5671d
Javadoc only.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088900 13f79535-47bb-0310-9956-ffa450edef68
2011-04-05 05:33:17 +00:00
Phil Steitz
f88d38ff18
Removed trailing space.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088896 13f79535-47bb-0310-9956-ffa450edef68
2011-04-05 04:57:19 +00:00
Phil Steitz
71b826accd
Changed CMAESOptimizer constructors to copy, rather than reference array arguments.
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JIRA: MATH-556
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088895 13f79535-47bb-0310-9956-ffa450edef68
2011-04-05 04:53:53 +00:00
Phil Steitz
2394a77405
Javadoc only.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088813 13f79535-47bb-0310-9956-ffa450edef68
2011-04-04 22:40:31 +00:00
Luc Maisonobe
129bca8975
Improved robustness of k-means++ algorithm, by tracking changes in points assignments to clusters
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088702 13f79535-47bb-0310-9956-ffa450edef68
2011-04-04 18:32:52 +00:00
Phil Steitz
b7d7b20ad0
Javadoc only.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088647 13f79535-47bb-0310-9956-ffa450edef68
2011-04-04 14:43:25 +00:00
Phil Steitz
328513f3ad
Changed MathUtils.round(double,int,int) to propagate rather than
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wrap runtime exceptions. Instead of MathRuntimeException, this method
now throws IllegalArgumentException or ArithmeticException under
the conditions specified in the javadoc.
JIRA: MATH-555
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088473 13f79535-47bb-0310-9956-ffa450edef68
2011-04-04 04:51:37 +00:00
Luc Maisonobe
fbbb96eb17
Reduced cancellation errors in Vector3D.crossProduct
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Jira: MATH-554
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088316 13f79535-47bb-0310-9956-ffa450edef68
2011-04-03 14:33:29 +00:00
Luc Maisonobe
ba0cf0e41b
allow 3 retries for testNextHex which is expected to randomly fail with low probability
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1088315 13f79535-47bb-0310-9956-ffa450edef68
2011-04-03 14:33:00 +00:00
Gilles Sadowski
368f17d194
MATH-552
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Fixed bug in "MultidimensionalCounter". Thanks to James Bence.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1087637 13f79535-47bb-0310-9956-ffa450edef68
2011-04-01 10:10:18 +00:00
Gilles Sadowski
3f53445d11
MATH-549
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Reverted changes performed in revision 1086057.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1087630 13f79535-47bb-0310-9956-ffa450edef68
2011-04-01 09:24:53 +00:00
Gilles Sadowski
dfea5addf8
MATH-423
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The "@Retry" annotation allows to select the number of retries of a
Junit test method (provided that the test class is itself annotated
with "@RunWith(RetryRunner.class).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1086539 13f79535-47bb-0310-9956-ffa450edef68
2011-03-29 10:28:37 +00:00
Gilles Sadowski
7f1d7b7e33
MATH-549
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Method can be "static".
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1086057 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 22:06:18 +00:00
Gilles Sadowski
e1852db1cf
MATH-551
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Modified "MathRuntimeException" class such that "SerializablePair" class has
become unnecessary.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1086045 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 21:51:31 +00:00
Mikkel Meyer Andersen
33959a8a4e
Javadoc fixes (added missing parameter documentations, removed documentation for non-existing parameter, and newline cleanup)
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085989 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 17:07:30 +00:00
Luc Maisonobe
87a8212704
fixed checkstyle warnings (no functional changes)
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085981 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 16:32:01 +00:00
Luc Maisonobe
4676568449
updated findbugs exceptions after 3.0 API changes
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085980 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 16:30:50 +00:00
Luc Maisonobe
ed1929b7c2
fixed javadoc warnings
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085962 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 15:20:09 +00:00
Luc Maisonobe
c7421029c6
announced resolution of MATH-423
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Jira: MATH-423
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085961 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 15:15:12 +00:00
Luc Maisonobe
525cddfb68
upgrated commons-parent pom to v20
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085958 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 15:11:29 +00:00
Luc Maisonobe
3c4a3dbd7c
Implemented a retry policy for tests that may randomly fail.
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Tests classes that may fail should be annotated with @RunWith(RetryRunner.class). This custom test runner attempts to re-run tests that fail, up to a maximum number of attempts defined as a constant in the test runner (currently set to 3 attempts max).
Jira: MATH-423
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085954 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 15:02:47 +00:00
Luc Maisonobe
1df2b780a2
upgraded Junit version to 4.8.2.
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This brings maven build up to date with respect to ant build, which already uses 4.8.2.
It will allow implementing a retry policy for the few tests that can randomly fail, using API introduced in Junit 4.5.
JIRA: MATH-423
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1085952 13f79535-47bb-0310-9956-ffa450edef68
2011-03-27 14:58:59 +00:00
Luc Maisonobe
3baecf4a66
removed unused import
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084735 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 20:57:29 +00:00
Luc Maisonobe
433cd1694e
removed deprecated code
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JIRA: MATH-438
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084700 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 19:53:34 +00:00
Luc Maisonobe
a22db05f92
Removed the ConvergingAlgorithm interface and ConvergingAlgorithmImpl class
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JIRA: MATH-500
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084690 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 19:36:04 +00:00
Luc Maisonobe
c0b1f96700
removed unused method in private internal class
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084600 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:28:19 +00:00
Luc Maisonobe
2cc5012409
removed unneeded @SuppressWarning
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084598 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:23:14 +00:00
Luc Maisonobe
22421b80fd
added missing serialVersionUID
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084597 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:22:19 +00:00
Luc Maisonobe
ff21663c8e
fixed call to deprecated method
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084596 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:20:54 +00:00
Luc Maisonobe
ba43534ea8
removed unused field
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084595 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:18:42 +00:00
Luc Maisonobe
d9e8a332b7
removed unused import
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084593 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:13:25 +00:00
Luc Maisonobe
d9e74e0417
removed unused variables
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084592 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:11:50 +00:00
Luc Maisonobe
97ca946c84
fixed varargs declaration warnings
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084591 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 14:04:45 +00:00
Luc Maisonobe
c83a4bc0c4
Added a consistency check for number of points with respect to the number of clusters in Kmeans++ clustering
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JIRA: MATH-436
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084577 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 13:19:23 +00:00
Luc Maisonobe
862103b3a8
removed unneeded null argument
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1084569 13f79535-47bb-0310-9956-ffa450edef68
2011-03-23 13:02:51 +00:00