Luc Maisonobe
f5765cf99d
Use the new differentation API for all optimizers.
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The older API is still supported as of version 3.1, but is implemented
by wrapping the user function into the new API and then calling the new
code.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401838 13f79535-47bb-0310-9956-ffa450edef68
2012-10-24 19:40:08 +00:00
Luc Maisonobe
7b5a64c0bb
Added converters for multivariate functions.
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The converters allow to convert back and forth between the older
and the newer differentiation API. They are considered temporary methods
for version 3.1 and will be removed in 4.0 as only the new API will
remain.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401837 13f79535-47bb-0310-9956-ffa450edef68
2012-10-24 19:39:45 +00:00
Thomas Neidhart
3bae991455
Added missing closing action tag.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401451 13f79535-47bb-0310-9956-ffa450edef68
2012-10-23 20:35:04 +00:00
Thomas Neidhart
477104bd09
Fix spelling.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401416 13f79535-47bb-0310-9956-ffa450edef68
2012-10-23 19:30:09 +00:00
Sebastien Brisard
db51254b40
Reverted changes inadvertently commited in r1401171.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401172 13f79535-47bb-0310-9956-ffa450edef68
2012-10-23 06:08:32 +00:00
Sebastien Brisard
9dffcfd3be
Maxima scripts to generate reference values for the gamma and logGamma
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functions.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401171 13f79535-47bb-0310-9956-ffa450edef68
2012-10-23 06:04:09 +00:00
Luc Maisonobe
6d5763c539
Removed unused exception.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401034 13f79535-47bb-0310-9956-ffa450edef68
2012-10-22 19:32:03 +00:00
Luc Maisonobe
2a9cbbab46
Finalized fix for MATH-880.
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This version should be much more robust on polygons computation than the
earlier ones. Note that the hyperplaneThickness parameter is a key
tuning parameter in difficult cases like the one involved in the issue.
As shown in the corresponding unit test, the value had to be raised to
1.0e-8 in order for the test to pass correctly.
JIRA: MATH-880
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401022 13f79535-47bb-0310-9956-ffa450edef68
2012-10-22 19:21:36 +00:00
Thomas Neidhart
c2e855d6a0
[MATH-759] add resolution to changes.xml.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1401000 13f79535-47bb-0310-9956-ffa450edef68
2012-10-22 18:47:33 +00:00
Gilles Sadowski
3b6bbf6d2c
Javadoc.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400881 13f79535-47bb-0310-9956-ffa450edef68
2012-10-22 13:57:26 +00:00
Gilles Sadowski
7096dabffa
MATH-854
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Fill "throw" clauses.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400850 13f79535-47bb-0310-9956-ffa450edef68
2012-10-22 11:57:17 +00:00
Luc Maisonobe
b25f448d2f
Improved polygons creation with a numerically more robust constructor.
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This is only a partial fix for issue 880 because there are still some
glitches in the first polygon involved in the issue.
JIRA: MATH-880
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400717 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 20:08:32 +00:00
Thomas Neidhart
c323480cf6
Added Dan Checkoway as contributor due to his patch for MATH-474.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400687 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 17:44:53 +00:00
Thomas Neidhart
231b9a8905
Fix special characters in changes.xml.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400685 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 17:43:08 +00:00
Thomas Neidhart
1d02ff125d
[MATH-474] Added Frequency#merge method, thanks to patch from Dan Checkoway.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400683 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 17:33:37 +00:00
Thomas Neidhart
ec6f1c8270
Small fixes of javadoc @throws tags.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400676 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 16:41:38 +00:00
Thomas Neidhart
8bada78845
Removed unneeded import in package-info.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400675 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 16:34:40 +00:00
Thomas Neidhart
bea6d09158
Fix checkstyle warnings, added missing javadoc.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400673 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 16:32:30 +00:00
Thomas Neidhart
5b9302d5be
[MATH-778] Allow unlimited input values for Dfp#multiply.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400671 13f79535-47bb-0310-9956-ffa450edef68
2012-10-21 16:22:50 +00:00
Gilles Sadowski
0912bac520
MATH-868
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MATH-879
"lambda" and "inputSigma" should be passed to "optimize" as arguments of
type "OptimizationData". Deprecated constructors. Updated unit tests.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400108 13f79535-47bb-0310-9956-ffa450edef68
2012-10-19 14:20:16 +00:00
Gilles Sadowski
ea138c2da2
MATH-816
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Mixture model distribution. Original code contributed by Jared Becksfort,
committed with changes as discussed on the JIRA page.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400040 13f79535-47bb-0310-9956-ffa450edef68
2012-10-19 11:00:53 +00:00
Gilles Sadowski
bdd5b45cf7
MATH-815
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Added method that was missing in the original commit: "getDimensions()",
renamed to "getDimension()".
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400017 13f79535-47bb-0310-9956-ffa450edef68
2012-10-19 09:55:01 +00:00
Gilles Sadowski
a355d8c20a
MATH-881
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Removed useless method.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1400010 13f79535-47bb-0310-9956-ffa450edef68
2012-10-19 09:30:44 +00:00
Gilles Sadowski
4a3a3eba60
MATH-881
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Removed meaningless properties for multivariate distributions.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1399864 13f79535-47bb-0310-9956-ffa450edef68
2012-10-18 21:26:13 +00:00
Gilles Sadowski
41f74ba651
Inner class should have been "static".
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1399433 13f79535-47bb-0310-9956-ffa450edef68
2012-10-17 21:09:27 +00:00
Gilles Sadowski
3a874d8f01
Formatting.
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"final" keyword.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1398547 13f79535-47bb-0310-9956-ffa450edef68
2012-10-15 22:30:30 +00:00
Gilles Sadowski
ecc9690e26
Formatting.
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Removed unnecessary decimal point on constants, and added explicit cast where
necessary.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1398297 13f79535-47bb-0310-9956-ffa450edef68
2012-10-15 14:09:32 +00:00
Gilles Sadowski
ac094067cf
MATH-873
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Removed usage of "maximum number of evaluations" in a place where it altered
the algorithm's core behaviour (whereas it should only serve as a processing
time limit).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1398284 13f79535-47bb-0310-9956-ffa450edef68
2012-10-15 13:33:43 +00:00
Gilles Sadowski
91011db79d
MATH-872
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Sigma values expressed as a kind of "OptimizationData". Deprecated
constructors that were passed an "inputSigma" argument.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1398275 13f79535-47bb-0310-9956-ffa450edef68
2012-10-15 13:12:15 +00:00
Gilles Sadowski
652c6220cb
MATH-874
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Simple bounds expressed as a kind of "0ptimizationData".
The specification of simple bounds is handled in "BaseAbstractMultivariateOptimizer";
hence "BaseAbstractMultivariateSimpleBoundsOptimizer" is deprecated.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1398263 13f79535-47bb-0310-9956-ffa450edef68
2012-10-15 12:16:53 +00:00
Gilles Sadowski
2b40d7c36b
MATH-874
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New API allows to pass the simplex as an argument to "optimize".
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1397759 13f79535-47bb-0310-9956-ffa450edef68
2012-10-13 01:12:58 +00:00
Gilles Sadowski
8bc689a30c
MATH-874
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New "optimize" method.
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1397758 13f79535-47bb-0310-9956-ffa450edef68
2012-10-13 01:09:02 +00:00
Gilles Sadowski
91be760415
Replaced bit operator with logical operator.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1397106 13f79535-47bb-0310-9956-ffa450edef68
2012-10-11 15:18:07 +00:00
Gilles Sadowski
d1ea9a6fb7
Javadoc. [After the MATH-867 fix, this warning is obsolete.]
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395949 13f79535-47bb-0310-9956-ffa450edef68
2012-10-09 10:45:16 +00:00
Luc Maisonobe
4b7c9c9408
Fixed javadoc warnings.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395937 13f79535-47bb-0310-9956-ffa450edef68
2012-10-09 10:04:36 +00:00
Gilles Sadowski
4907b06568
MATH-876
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Changed "<commons.componentid>" property (used in "commons-parent" to create
the "Bundle-SymbolicName" entry in "MANIFEST.MF").
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395545 13f79535-47bb-0310-9956-ffa450edef68
2012-10-08 13:14:50 +00:00
Sebastien Brisard
37f8de9542
MATH-875: deprecated sparseIterator() in the RealVector hierarchy, and replaced its use with iterator().
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395455 13f79535-47bb-0310-9956-ffa450edef68
2012-10-08 05:54:21 +00:00
Sebastien Brisard
d0e8a3587a
MATH-854: FieldMatrix.setSubMatrix does *not* throw NumberIsTooSmallException.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395453 13f79535-47bb-0310-9956-ffa450edef68
2012-10-08 05:19:50 +00:00
Sebastien Brisard
7cac883ba0
MATH-854: populated throws clause of BlockFieldMatrix.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395452 13f79535-47bb-0310-9956-ffa450edef68
2012-10-08 05:16:27 +00:00
Gilles Sadowski
3e10f8d478
Javadoc.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1395181 13f79535-47bb-0310-9956-ffa450edef68
2012-10-06 22:17:12 +00:00
Phil Steitz
3084dd1e4a
Made file character set explicit and added file loading tests.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1394882 13f79535-47bb-0310-9956-ffa450edef68
2012-10-06 01:05:06 +00:00
Phil Steitz
288558e48e
Removed trailing spaces.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1394763 13f79535-47bb-0310-9956-ffa450edef68
2012-10-05 19:54:00 +00:00
Phil Steitz
955dda0258
Javadoc.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1394761 13f79535-47bb-0310-9956-ffa450edef68
2012-10-05 19:52:15 +00:00
Gilles Sadowski
52990bc644
Read bound values from base class instead of duplicating the data.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1393978 13f79535-47bb-0310-9956-ffa450edef68
2012-10-04 10:25:42 +00:00
Gilles Sadowski
e41cea1e33
Improved Javadoc.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1393641 13f79535-47bb-0310-9956-ffa450edef68
2012-10-03 18:06:33 +00:00
Thomas Neidhart
8eb3bbaca4
Remove trailing spaces, added missing javadoc tags.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1393153 13f79535-47bb-0310-9956-ffa450edef68
2012-10-02 20:15:00 +00:00
Sebastien Brisard
3b5d0dd52c
User's guide for special functions now reports accuracy of
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Gamma.gamma(double).
git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1392751 13f79535-47bb-0310-9956-ffa450edef68
2012-10-02 06:09:03 +00:00
Sebastien Brisard
bb0827cc81
MATH-854: populated throws clause of Array2DRowFieldMatrix.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1392748 13f79535-47bb-0310-9956-ffa450edef68
2012-10-02 05:35:59 +00:00
Sebastien Brisard
72051d7f6d
MATH-854: populated throws clause of AbstractFieldMatrix.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1392743 13f79535-47bb-0310-9956-ffa450edef68
2012-10-02 05:21:51 +00:00
Sebastien Brisard
9f663a15e6
MATH-854: populated throws clause of FieldMatrix.
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git-svn-id: https://svn.apache.org/repos/asf/commons/proper/math/trunk@1392742 13f79535-47bb-0310-9956-ffa450edef68
2012-10-02 05:14:38 +00:00