mirror of https://github.com/apache/druid.git
Fix Avro support in Web Console (#10232)
* Fix Avro OCF detection prefix and run formation detection on raw input * Support Avro Fixed and Enum types correctly * Check Avro version byte in format detection * Add test for AvroOCFReader.sample Ensures that the Sampler doesn't receive raw input that it can't serialize into JSON. * Document Avro type handling * Add TS unit tests for guessInputFormat
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@ -29,4 +29,23 @@ two Avro Parsers for stream ingestion and Hadoop batch ingestion.
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See [Avro Hadoop Parser](../../ingestion/data-formats.md#avro-hadoop-parser) and [Avro Stream Parser](../../ingestion/data-formats.md#avro-stream-parser)
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See [Avro Hadoop Parser](../../ingestion/data-formats.md#avro-hadoop-parser) and [Avro Stream Parser](../../ingestion/data-formats.md#avro-stream-parser)
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for more details about how to use these in an ingestion spec.
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for more details about how to use these in an ingestion spec.
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Additionally, it provides an InputFormat for reading Avro OCF files when using
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[native batch indexing](../../ingestion/native-batch.md), see [Avro OCF](../../ingestion/data-formats.md#avro-ocf)
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for details on how to ingest OCF files.
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Make sure to [include](../../development/extensions.md#loading-extensions) `druid-avro-extensions` as an extension.
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Make sure to [include](../../development/extensions.md#loading-extensions) `druid-avro-extensions` as an extension.
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### Avro Types
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Druid supports most Avro types natively, there are however some exceptions which are detailed here.
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`union` types which aren't of the form `[null, otherType]` aren't supported at this time.
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`bytes` and `fixed` Avro types will be returned by default as base64 encoded strings unless the `binaryAsString` option is enabled on the Avro parser.
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This setting will decode these types as UTF-8 strings.
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`enum` types will be returned as `string` of the enum symbol.
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`record` and `map` types representing nested data can be ingested using [flattenSpec](../../ingestion/data-formats.md#flattenspec) on the parser.
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Druid doesn't currently support Avro logical types, they will be ignored and fields will be handled according to the underlying primitive type.
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@ -227,6 +227,8 @@ The Parquet `inputFormat` has the following components:
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> You need to include the [`druid-avro-extensions`](../development/extensions-core/avro.md) as an extension to use the Avro OCF input format.
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> You need to include the [`druid-avro-extensions`](../development/extensions-core/avro.md) as an extension to use the Avro OCF input format.
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> See the [Avro Types](../development/extensions-core/avro.md#avro-types) section for how Avro types are handled in Druid
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The `inputFormat` to load data of Avro OCF format. An example is:
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The `inputFormat` to load data of Avro OCF format. An example is:
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```json
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```json
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"ioConfig": {
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"ioConfig": {
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@ -343,6 +345,8 @@ Each line can be further parsed using [`parseSpec`](#parsespec).
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> You need to include the [`druid-avro-extensions`](../development/extensions-core/avro.md) as an extension to use the Avro Hadoop Parser.
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> You need to include the [`druid-avro-extensions`](../development/extensions-core/avro.md) as an extension to use the Avro Hadoop Parser.
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> See the [Avro Types](../development/extensions-core/avro.md#avro-types) section for how Avro types are handled in Druid
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This parser is for [Hadoop batch ingestion](./hadoop.md).
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This parser is for [Hadoop batch ingestion](./hadoop.md).
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The `inputFormat` of `inputSpec` in `ioConfig` must be set to `"org.apache.druid.data.input.avro.AvroValueInputFormat"`.
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The `inputFormat` of `inputSpec` in `ioConfig` must be set to `"org.apache.druid.data.input.avro.AvroValueInputFormat"`.
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You may want to set Avro reader's schema in `jobProperties` in `tuningConfig`,
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You may want to set Avro reader's schema in `jobProperties` in `tuningConfig`,
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@ -865,6 +869,8 @@ an explicitly defined [format](http://www.joda.org/joda-time/apidocs/org/joda/ti
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> You need to include the [`druid-avro-extensions`](../development/extensions-core/avro.md) as an extension to use the Avro Stream Parser.
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> You need to include the [`druid-avro-extensions`](../development/extensions-core/avro.md) as an extension to use the Avro Stream Parser.
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> See the [Avro Types](../development/extensions-core/avro.md#avro-types) section for how Avro types are handled in Druid
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This parser is for [stream ingestion](./index.md#streaming) and reads Avro data from a stream directly.
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This parser is for [stream ingestion](./index.md#streaming) and reads Avro data from a stream directly.
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| Field | Type | Description | Required |
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| Field | Type | Description | Required |
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@ -25,7 +25,9 @@ import com.jayway.jsonpath.JsonPath;
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import com.jayway.jsonpath.Option;
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import com.jayway.jsonpath.Option;
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import com.jayway.jsonpath.spi.json.JsonProvider;
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import com.jayway.jsonpath.spi.json.JsonProvider;
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import org.apache.avro.Schema;
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import org.apache.avro.Schema;
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import org.apache.avro.generic.GenericData;
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import org.apache.avro.generic.GenericArray;
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import org.apache.avro.generic.GenericEnumSymbol;
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import org.apache.avro.generic.GenericFixed;
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import org.apache.avro.generic.GenericRecord;
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import org.apache.avro.generic.GenericRecord;
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import org.apache.avro.util.Utf8;
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import org.apache.avro.util.Utf8;
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import org.apache.druid.java.util.common.StringUtils;
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import org.apache.druid.java.util.common.StringUtils;
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@ -56,7 +58,9 @@ public class AvroFlattenerMaker implements ObjectFlatteners.FlattenerMaker<Gener
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Schema.Type.INT,
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Schema.Type.INT,
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Schema.Type.LONG,
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Schema.Type.LONG,
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Schema.Type.FLOAT,
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Schema.Type.FLOAT,
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Schema.Type.DOUBLE
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Schema.Type.DOUBLE,
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Schema.Type.ENUM,
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Schema.Type.FIXED
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);
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);
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private static boolean isPrimitive(Schema schema)
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private static boolean isPrimitive(Schema schema)
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@ -137,9 +141,15 @@ public class AvroFlattenerMaker implements ObjectFlatteners.FlattenerMaker<Gener
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return AVRO_JSON_PROVIDER;
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return AVRO_JSON_PROVIDER;
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}
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}
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@Override
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public Object finalizeConversionForMap(Object o)
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{
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return transformValue(o);
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}
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private Object transformValue(final Object field)
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private Object transformValue(final Object field)
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{
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{
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if (fromPigAvroStorage && field instanceof GenericData.Array) {
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if (fromPigAvroStorage && field instanceof GenericArray) {
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return Lists.transform((List) field, item -> String.valueOf(((GenericRecord) item).get(0)));
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return Lists.transform((List) field, item -> String.valueOf(((GenericRecord) item).get(0)));
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}
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}
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if (field instanceof ByteBuffer) {
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if (field instanceof ByteBuffer) {
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@ -152,6 +162,14 @@ public class AvroFlattenerMaker implements ObjectFlatteners.FlattenerMaker<Gener
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return field.toString();
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return field.toString();
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} else if (field instanceof List) {
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} else if (field instanceof List) {
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return ((List<?>) field).stream().filter(Objects::nonNull).collect(Collectors.toList());
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return ((List<?>) field).stream().filter(Objects::nonNull).collect(Collectors.toList());
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} else if (field instanceof GenericEnumSymbol) {
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return field.toString();
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} else if (field instanceof GenericFixed) {
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if (binaryAsString) {
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return StringUtils.fromUtf8(((GenericFixed) field).bytes());
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} else {
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return ((GenericFixed) field).bytes();
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}
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}
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}
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return field;
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return field;
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}
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}
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@ -19,10 +19,8 @@
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package org.apache.druid.data.input;
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package org.apache.druid.data.input;
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import com.fasterxml.jackson.databind.DeserializationFeature;
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import com.fasterxml.jackson.databind.Module;
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import com.fasterxml.jackson.databind.Module;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import com.fasterxml.jackson.databind.SerializationFeature;
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import com.google.common.base.Function;
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import com.google.common.base.Function;
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import com.google.common.base.Splitter;
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import com.google.common.base.Splitter;
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import com.google.common.collect.ImmutableList;
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import com.google.common.collect.ImmutableList;
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@ -40,6 +38,7 @@ import org.apache.druid.data.input.impl.DimensionsSpec;
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import org.apache.druid.data.input.impl.TimestampSpec;
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import org.apache.druid.data.input.impl.TimestampSpec;
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import org.apache.druid.data.input.schemarepo.Avro1124RESTRepositoryClientWrapper;
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import org.apache.druid.data.input.schemarepo.Avro1124RESTRepositoryClientWrapper;
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import org.apache.druid.data.input.schemarepo.Avro1124SubjectAndIdConverter;
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import org.apache.druid.data.input.schemarepo.Avro1124SubjectAndIdConverter;
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import org.apache.druid.jackson.DefaultObjectMapper;
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import org.apache.druid.java.util.common.parsers.JSONPathFieldSpec;
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import org.apache.druid.java.util.common.parsers.JSONPathFieldSpec;
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import org.apache.druid.java.util.common.parsers.JSONPathFieldType;
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import org.apache.druid.java.util.common.parsers.JSONPathFieldType;
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import org.apache.druid.java.util.common.parsers.JSONPathSpec;
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import org.apache.druid.java.util.common.parsers.JSONPathSpec;
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@ -90,10 +89,12 @@ public class AvroStreamInputRowParserTest
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"someStringArray",
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"someStringArray",
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"someIntArray",
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"someIntArray",
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"someFloat",
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"someFloat",
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"someUnion",
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EVENT_TYPE,
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EVENT_TYPE,
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ID,
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"someFixed",
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"someBytes",
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"someBytes",
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"someUnion",
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ID,
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"someEnum",
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"someLong",
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"someLong",
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"someInt",
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"someInt",
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"timestamp"
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"timestamp"
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@ -158,14 +159,12 @@ public class AvroStreamInputRowParserTest
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.build());
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.build());
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private static final Pattern BRACES_AND_SPACE = Pattern.compile("[{} ]");
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private static final Pattern BRACES_AND_SPACE = Pattern.compile("[{} ]");
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private final ObjectMapper jsonMapper = new ObjectMapper();
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private final ObjectMapper jsonMapper = new DefaultObjectMapper();
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@Before
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@Before
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public void before()
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public void before()
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{
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{
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jsonMapper.configure(SerializationFeature.FAIL_ON_EMPTY_BEANS, false);
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jsonMapper.configure(DeserializationFeature.FAIL_ON_UNKNOWN_PROPERTIES, false);
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for (Module jacksonModule : new AvroExtensionsModule().getJacksonModules()) {
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for (Module jacksonModule : new AvroExtensionsModule().getJacksonModules()) {
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jsonMapper.registerModule(jacksonModule);
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jsonMapper.registerModule(jacksonModule);
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}
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}
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@ -335,7 +334,10 @@ public class AvroStreamInputRowParserTest
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);
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);
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Assert.assertEquals(Collections.singletonList(SOME_UNION_VALUE), inputRow.getDimension("someUnion"));
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Assert.assertEquals(Collections.singletonList(SOME_UNION_VALUE), inputRow.getDimension("someUnion"));
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Assert.assertEquals(Collections.emptyList(), inputRow.getDimension("someNull"));
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Assert.assertEquals(Collections.emptyList(), inputRow.getDimension("someNull"));
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Assert.assertEquals(SOME_FIXED_VALUE, inputRow.getRaw("someFixed"));
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Assert.assertEquals(
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Arrays.toString(SOME_FIXED_VALUE.bytes()),
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Arrays.toString((byte[]) (inputRow.getRaw("someFixed")))
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);
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Assert.assertEquals(
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Assert.assertEquals(
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Arrays.toString(SOME_BYTES_VALUE.array()),
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Arrays.toString(SOME_BYTES_VALUE.array()),
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Arrays.toString((byte[]) (inputRow.getRaw("someBytes")))
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Arrays.toString((byte[]) (inputRow.getRaw("someBytes")))
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@ -80,7 +80,8 @@ public class AvroFlattenerMakerTest
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flattener.getRootField(record, "someNull")
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flattener.getRootField(record, "someNull")
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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record.getSomeFixed(),
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// Casted to an array by transformValue
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record.getSomeFixed().bytes(),
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flattener.getRootField(record, "someFixed")
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flattener.getRootField(record, "someFixed")
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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@ -89,7 +90,8 @@ public class AvroFlattenerMakerTest
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flattener.getRootField(record, "someBytes")
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flattener.getRootField(record, "someBytes")
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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record.getSomeEnum(),
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// Casted to a string by transformValue
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record.getSomeEnum().toString(),
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flattener.getRootField(record, "someEnum")
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flattener.getRootField(record, "someEnum")
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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@ -165,7 +167,8 @@ public class AvroFlattenerMakerTest
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flattener.makeJsonPathExtractor("$.someNull").apply(record)
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flattener.makeJsonPathExtractor("$.someNull").apply(record)
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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record.getSomeFixed(),
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// Casted to an array by transformValue
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record.getSomeFixed().bytes(),
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flattener.makeJsonPathExtractor("$.someFixed").apply(record)
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flattener.makeJsonPathExtractor("$.someFixed").apply(record)
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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@ -174,7 +177,8 @@ public class AvroFlattenerMakerTest
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flattener.makeJsonPathExtractor("$.someBytes").apply(record)
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flattener.makeJsonPathExtractor("$.someBytes").apply(record)
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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record.getSomeEnum(),
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// Casted to a string by transformValue
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record.getSomeEnum().toString(),
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flattener.makeJsonPathExtractor("$.someEnum").apply(record)
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flattener.makeJsonPathExtractor("$.someEnum").apply(record)
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);
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);
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Assert.assertEquals(
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Assert.assertEquals(
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@ -29,6 +29,7 @@ import org.apache.druid.data.input.AvroHadoopInputRowParserTest;
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import org.apache.druid.data.input.AvroStreamInputRowParserTest;
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import org.apache.druid.data.input.AvroStreamInputRowParserTest;
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import org.apache.druid.data.input.InputEntityReader;
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import org.apache.druid.data.input.InputEntityReader;
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import org.apache.druid.data.input.InputRow;
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import org.apache.druid.data.input.InputRow;
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import org.apache.druid.data.input.InputRowListPlusRawValues;
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import org.apache.druid.data.input.InputRowSchema;
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import org.apache.druid.data.input.InputRowSchema;
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import org.apache.druid.data.input.impl.DimensionsSpec;
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import org.apache.druid.data.input.impl.DimensionsSpec;
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import org.apache.druid.data.input.impl.FileEntity;
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import org.apache.druid.data.input.impl.FileEntity;
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@ -128,18 +129,66 @@ public class AvroOCFReaderTest
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}
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}
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}
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}
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@Test
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public void testSample() throws Exception
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{
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final ObjectMapper mapper = new DefaultObjectMapper();
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mapper.setInjectableValues(
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new InjectableValues.Std().addValue(ObjectMapper.class, mapper)
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);
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final InputEntityReader reader = createReader(mapper, null);
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try (CloseableIterator<InputRowListPlusRawValues> iterator = reader.sample()) {
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Assert.assertTrue(iterator.hasNext());
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final InputRowListPlusRawValues row = iterator.next();
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Assert.assertFalse(iterator.hasNext());
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final Map<String, Object> rawColumns = row.getRawValues();
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Assert.assertNotNull(rawColumns);
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Assert.assertEquals(19, rawColumns.size());
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final List<InputRow> inputRows = row.getInputRows();
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Assert.assertNotNull(inputRows);
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final InputRow inputRow = Iterables.getOnlyElement(inputRows);
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assertInputRow(inputRow);
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}
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}
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@Test
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public void testSampleSerdeRaw() throws Exception
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{
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final ObjectMapper mapper = new DefaultObjectMapper();
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mapper.setInjectableValues(
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new InjectableValues.Std().addValue(ObjectMapper.class, mapper)
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);
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final InputEntityReader reader = createReader(mapper, null);
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try (CloseableIterator<InputRowListPlusRawValues> iterator = reader.sample()) {
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Assert.assertTrue(iterator.hasNext());
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final InputRowListPlusRawValues row = iterator.next();
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Assert.assertFalse(iterator.hasNext());
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final List<InputRow> inputRows = row.getInputRows();
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Assert.assertNotNull(inputRows);
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final InputRow inputRow = Iterables.getOnlyElement(inputRows);
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assertInputRow(inputRow);
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// Ensure the raw values can be serialised into JSON
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mapper.writeValueAsString(row.getRawValues());
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}
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}
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private void assertRow(InputEntityReader reader) throws IOException
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private void assertRow(InputEntityReader reader) throws IOException
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{
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{
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try (CloseableIterator<InputRow> iterator = reader.read()) {
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try (CloseableIterator<InputRow> iterator = reader.read()) {
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Assert.assertTrue(iterator.hasNext());
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Assert.assertTrue(iterator.hasNext());
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final InputRow row = iterator.next();
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final InputRow row = iterator.next();
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Assert.assertEquals(DateTimes.of("2015-10-25T19:30:00.000Z"), row.getTimestamp());
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assertInputRow(row);
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Assert.assertEquals("type-a", Iterables.getOnlyElement(row.getDimension("eventType")));
|
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Assert.assertEquals(679865987569912369L, row.getMetric("someLong"));
|
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Assert.assertFalse(iterator.hasNext());
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Assert.assertFalse(iterator.hasNext());
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}
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}
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}
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}
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|
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private void assertInputRow(InputRow row)
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{
|
||||||
|
Assert.assertEquals(DateTimes.of("2015-10-25T19:30:00.000Z"), row.getTimestamp());
|
||||||
|
Assert.assertEquals("type-a", Iterables.getOnlyElement(row.getDimension("eventType")));
|
||||||
|
Assert.assertEquals(679865987569912369L, row.getMetric("someLong"));
|
||||||
|
}
|
||||||
|
|
||||||
private InputEntityReader createReader(
|
private InputEntityReader createReader(
|
||||||
ObjectMapper mapper,
|
ObjectMapper mapper,
|
||||||
Map<String, Object> readerSchema
|
Map<String, Object> readerSchema
|
||||||
|
|
|
@ -16,7 +16,7 @@
|
||||||
* limitations under the License.
|
* limitations under the License.
|
||||||
*/
|
*/
|
||||||
|
|
||||||
import { cleanSpec, downgradeSpec, upgradeSpec } from './ingestion-spec';
|
import { cleanSpec, downgradeSpec, guessInputFormat, upgradeSpec } from './ingestion-spec';
|
||||||
|
|
||||||
describe('ingestion-spec', () => {
|
describe('ingestion-spec', () => {
|
||||||
const oldSpec = {
|
const oldSpec = {
|
||||||
|
@ -120,4 +120,35 @@ describe('ingestion-spec', () => {
|
||||||
},
|
},
|
||||||
});
|
});
|
||||||
});
|
});
|
||||||
|
|
||||||
|
describe('guessInputFormat', () => {
|
||||||
|
it('works for parquet', () => {
|
||||||
|
expect(guessInputFormat(['PAR1lol']).type).toEqual('parquet');
|
||||||
|
});
|
||||||
|
|
||||||
|
it('works for orc', () => {
|
||||||
|
expect(guessInputFormat(['ORClol']).type).toEqual('orc');
|
||||||
|
});
|
||||||
|
|
||||||
|
it('works for AVRO', () => {
|
||||||
|
expect(guessInputFormat(['Obj\x01lol']).type).toEqual('avro_ocf');
|
||||||
|
expect(guessInputFormat(['Obj1lol']).type).toEqual('regex');
|
||||||
|
});
|
||||||
|
|
||||||
|
it('works for JSON', () => {
|
||||||
|
expect(guessInputFormat(['{"a":1}']).type).toEqual('json');
|
||||||
|
});
|
||||||
|
|
||||||
|
it('works for TSV', () => {
|
||||||
|
expect(guessInputFormat(['A\tB\tX\tY']).type).toEqual('tsv');
|
||||||
|
});
|
||||||
|
|
||||||
|
it('works for CSV', () => {
|
||||||
|
expect(guessInputFormat(['A,B,X,Y']).type).toEqual('csv');
|
||||||
|
});
|
||||||
|
|
||||||
|
it('works for regex', () => {
|
||||||
|
expect(guessInputFormat(['A|B|X|Y']).type).toEqual('regex');
|
||||||
|
});
|
||||||
|
});
|
||||||
});
|
});
|
||||||
|
|
|
@ -2656,7 +2656,7 @@ export function fillInputFormat(spec: IngestionSpec, sampleData: string[]): Inge
|
||||||
return deepSet(spec, 'spec.ioConfig.inputFormat', guessInputFormat(sampleData));
|
return deepSet(spec, 'spec.ioConfig.inputFormat', guessInputFormat(sampleData));
|
||||||
}
|
}
|
||||||
|
|
||||||
function guessInputFormat(sampleData: string[]): InputFormat {
|
export function guessInputFormat(sampleData: string[]): InputFormat {
|
||||||
let sampleDatum = sampleData[0];
|
let sampleDatum = sampleData[0];
|
||||||
if (sampleDatum) {
|
if (sampleDatum) {
|
||||||
sampleDatum = String(sampleDatum); // Really ensure it is a string
|
sampleDatum = String(sampleDatum); // Really ensure it is a string
|
||||||
|
@ -2672,7 +2672,7 @@ function guessInputFormat(sampleData: string[]): InputFormat {
|
||||||
return inputFormatFromType('orc');
|
return inputFormatFromType('orc');
|
||||||
}
|
}
|
||||||
// Avro OCF 4 byte magic header: https://avro.apache.org/docs/current/spec.html#Object+Container+Files
|
// Avro OCF 4 byte magic header: https://avro.apache.org/docs/current/spec.html#Object+Container+Files
|
||||||
if (sampleDatum.startsWith('Obj1')) {
|
if (sampleDatum.startsWith('Obj') && sampleDatum.charCodeAt(3) === 1) {
|
||||||
return inputFormatFromType('avro_ocf');
|
return inputFormatFromType('avro_ocf');
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
|
@ -1235,9 +1235,7 @@ export class LoadDataView extends React.PureComponent<LoadDataViewProps, LoadDat
|
||||||
fillDataSourceNameIfNeeded(
|
fillDataSourceNameIfNeeded(
|
||||||
fillInputFormat(
|
fillInputFormat(
|
||||||
spec,
|
spec,
|
||||||
filterMap(inputQueryState.data.data, l =>
|
filterMap(inputQueryState.data.data, l => (l.input ? l.input.raw : undefined)),
|
||||||
l.parsed ? l.parsed.raw : undefined,
|
|
||||||
),
|
|
||||||
),
|
),
|
||||||
),
|
),
|
||||||
);
|
);
|
||||||
|
|
|
@ -613,6 +613,7 @@ Avro-1124
|
||||||
SchemaRepo
|
SchemaRepo
|
||||||
avro
|
avro
|
||||||
avroBytesDecoder
|
avroBytesDecoder
|
||||||
|
flattenSpec
|
||||||
jq
|
jq
|
||||||
org.apache.druid.extensions
|
org.apache.druid.extensions
|
||||||
schemaRepository
|
schemaRepository
|
||||||
|
|
Loading…
Reference in New Issue