Python Druid API for use in notebooks
Revises existing notebooks and readme to reference
the new API.
Notebook to explain the new API.
Split README into a console version and a notebook
version to work around lack of a nice display for
md files.
Update the REST API notebook to use simpler Requests calls
Converted the SQL tutorial to use the Python library
README file, converted to using properties
---------
Co-authored-by: Charles Smith <techdocsmith@gmail.com>
Co-authored-by: Victoria Lim <vtlim@users.noreply.github.com>
* docs: add juptyer API tutorial for API and jupyter tutorial index (#3)
(cherry picked from commit aeb8d9e3390fa26d9c533dce0862295b80c58583)
* update prereqs and fix jupyterlab name
* Removing notebook since 13345 has it
13345 should be merged first
* update contributing instructions
* docs: link to the Druid SQL tutorial
* Add link to partitioning
* fix merge conflict
* Saving
* Update docs/tutorials/tutorial-jupyter-index.md
* Remove partitioning
---------
Co-authored-by: 317brian <53799971+317brian@users.noreply.github.com>
Co-authored-by: brian.le <brian.le@imply.io>
Co-authored-by: Charles Smith <techdocsmith@gmail.com>
This commit updates the task memory allocation logic.
- min task count is 2 and max task count is number of cpus on the machine
- task count increases wrt total task memory
- task memory increases from 512m to 2g
This PR expands `StringDimensionIndexer` to handle conversion of `byte[]` to base64 encoded strings, rather than the current behavior of calling java `toString`.
This issue was uncovered by a regression of sorts introduced by #13519, which updated the protobuf extension to directly convert stuff to java types, resulting in `bytes` typed values being converted as `byte[]` instead of a base64 string which the previous JSON based conversion created. While outputting `byte[]` is more consistent with other input formats, and preferable when the bytes can be consumed directly (such as complex types serde), when fed to a `StringDimensionIndexer`, it resulted in an ugly java `toString` because `processRowValsToUnsortedEncodedKeyComponent` is fed the output of `row.getRaw(..)`. Converting `byte[]` to a base64 string within `StringDimensionIndexer` is consistent with the behavior of calling `row.getDimension(..)` which does do this coercion (and why many tests on binary types appeared to be doing the expected thing).
I added some protobuf `bytes` tests, but they don't really hit the new `StringDimensionIndexer` behavior because they operate on the `InputRow` directly, and call `getDimension` to validate stuff. The parser based version still uses the old conversion mechanisms, so when not using a flattener incorrectly calls `toString` on the `ByteString`. I have encoded this behavior in the test for now, if we either update the parser to use the new flattener or just .. remove parsers we can remove this test stuff.
* docs: notebook for API tutorial
* Apply suggestions from code review
Co-authored-by: Charles Smith <techdocsmith@gmail.com>
* address the other comments
* typo
* add commentary to outputs
* address feedback from will
* delete unnecessary comment
Co-authored-by: Charles Smith <techdocsmith@gmail.com>
Changes:
* Use 80% of memory specified for running services (versus 50% earlier).
* Tasks get either 512m / 1024m or 2048m now (versus 512m or 2048m earlier).
* Add direct memory for router.
* Druid automated quickstart
* remove conf/druid/single-server/quickstart/_common/historical/jvm.config
* Minor changes in python script
* Add lower bound memory for some services
* Additional runtime properties for services
* Update supervise script to accept command arguments, corresponding changes in druid-quickstart.py
* File end newline
* Limit the ability to start multiple instances of a service, documentation changes
* simplify script arguments
* restore changes in medium profile
* run-druid refactor
* compute and pass middle manager runtime properties to run-druid
supervise script changes to process java opts array
use argparse, leave free memory, logging
* Remove extra quotes from mm task javaopts array
* Update logic to compute minimum memory
* simplify run-druid
* remove debug options from run-druid
* resolve the config_path provided
* comment out service specific runtime properties which are computed in the code
* simplify run-druid
* clean up docs, naming changes
* Throw ValueError exception on illegal state
* update docs
* rename args, compute_only -> compute, run_zk -> zk
* update help documentation
* update help documentation
* move task memory computation into separate method
* Add validation checks
* remove print
* Add validations
* remove start-druid bash script, rename start-druid-main
* Include tasks in lower bound memory calculation
* Fix test
* 256m instead of 256g
* caffeine cache uses 5% of heap
* ensure min task count is 2, task count is monotonic
* update configs and documentation for runtime props in conf/druid/single-server/quickstart
* Update docs
* Specify memory argument for each profile in single-server.md
* Update middleManager runtime.properties
* Move quickstart configs to conf/druid/base, add bash launch script, support python2
* Update supervise script
* rename base config directory to auto
* rename python script, changes to pass repeated args to supervise
* remove exmaples/conf/druid/base dir
* add docs
* restore changes in conf dir
* update start-druid-auto
* remove hashref for commands in supervise script
* start-druid-main java_opts array is comma separated
* update entry point script name in python script
* Update help docs
* documentation changes
* docs changes
* update docs
* add support for running indexer
* update supported services list
* update help
* Update python.md
* remove dir
* update .spelling
* Remove dependency on psutil and pathlib
* update docs
* Update get_physical_memory method
* Update help docs
* update docs
* update method to get physical memory on python
* udpate spelling
* update .spelling
* minor change
* Minor change
* memory comptuation for indexer
* update start-druid
* Update python.md
* Update single-server.md
* Update python.md
* run python3 --version to check if python is installed
* Update supervise script
* start-druid: echo message if python not found
* update anchor text
* minor change
* Update condition in supervise script
* JVM not jvm in docs
Eliminates two common sources of noise with Kafka supervisors that have
large numbers of tasks and partitions:
1) Log the report at DEBUG rather than INFO level at each run cycle.
It can get quite large, and can be retrieved via API when needed.
2) Use log4j2.xml to quiet down the org.apache.kafka.clients.consumer.internals
package. Avoids a log message per-partition per-minute as part of seeking
to the latest offset in the reporting thread. In the tasks, where this
sort of logging might be more useful, we have another log message with
the same information: "Seeking partition[%s] to[%s]".
Druid currently uses Zookeeper dependent options as the default.
This commit updates the following to use HTTP as the default instead.
- task runner. `druid.indexer.runner.type=remote -> httpRemote`
- load queue peon. `druid.coordinator.loadqueuepeon.type=curator -> http`
- server inventory view. `druid.serverview.type=curator -> http`
* apache#12063 Ease of hidding sensitive properties from /status/properties endpoint
* apache#12063 Ease of hidding sensitive properties from /status/properties endpoint
* apache#12063 Ease of hidding sensitive properties from /status/properties endpoint
using one property for hiding properties, updated the index.md to document hiddenProperties
* apache#12063 Ease of hidding sensitive properties from /status/properties endpoint
Added java docs
* apache#12063 Ease of hidding sensitive properties from /status/properties endpoint
Add "password", "key", "token", "pwd" as default druid.server.hiddenProperties
fixed typo and removed redundant space
Co-authored-by: zemin <zemin.piao@adyen.com>
The docs say Java 17 support is experimental, and give tips on running
successfully with Java 17.
This patch also removes java.base/jdk.internal.perf and
jdk.management/com.sun.management.internal from the list of required
exports and opens, because they were formerly needed for JvmMonitor,
which was rewritten in #12481 to use MXBeans instead.
* changes to run examples on macos where cd command returns current directory
* Update examples/bin/run-druid
Co-authored-by: Frank Chen <frankchen@apache.org>
* merging
* sending output of cd command to /dev/null
Co-authored-by: Frank Chen <frankchen@apache.org>
* Improved Java 17 support and Java runtime docs.
1) Add a "Java runtime" doc page with information about supported
Java versions, garbage collection, and strong encapsulation..
2) Update asm and equalsverifier to versions that support Java 17.
3) Add additional "--add-opens" lines to surefire configuration, so
tests can pass successfully under Java 17.
4) Switch openjdk15 tests to openjdk17.
5) Update FrameFile to specifically mention Java runtime incompatibility
as the cause of not being able to use Memory.map.
6) Update SegmentLoadDropHandler to log an error for Errors too, not
just Exceptions. This is important because an IllegalAccessError is
encountered when the correct "--add-opens" line is not provided,
which would otherwise be silently ignored.
7) Update example configs to use druid.indexer.runner.javaOptsArray
instead of druid.indexer.runner.javaOpts. (The latter is deprecated.)
* Adjustments.
* Use run-java in more places.
* Add run-java.
* Update .gitignore.
* Exclude hadoop-client-api.
Brought in when building on Java 17.
* Swap one more usage of java.
* Fix the run-java script.
* Fix flag.
* Include link to Temurin.
* Spelling.
* Update examples/bin/run-java
Co-authored-by: Xavier Léauté <xl+github@xvrl.net>
Co-authored-by: Xavier Léauté <xl+github@xvrl.net>
* Python 3 support for post-index-task.
Useful when running on macOS or any other system that
doesn't have Python 2.
* Encode JSON returned by read_task_file.
* Adjust.
* Skip needless loads.
* Add a decode.
* Additional decodes needed.
* Add TIME_IN_INTERVAL SQL operator.
The operator is implemented as a convertlet rather than an
OperatorConversion, because this allows it to be equivalent to using
the >= and < operators directly.
* SqlParserPos cannot be null here.
* Remove unused import.
* Doc updates.
* Add words to dictionary.
* Service stdout log files, move logs to log/.
Two changes that make log behavior cleaner:
1) Redirect messages from the Java runtime to their own log files.
Otherwise, they would get jumbled up in the output of the all-in-one
start command.
2) Use log/ instead of bin/log/ for the default log directory. Makes them
easier to find.
Additionally, add documentation about how to avoid the reflective
access warnings in Java 11.
* Spelling.
* See if code formatting affects spelling.
Fix errors related to zulu8 installation for building the Hadoop Docker image in the Load From Apache Hadoop tutorial.
The steps to download zulu8 in the Dockerfile and setup-zulu-repo.sh were replaced with the steps in the Dockerfile released by zulu-openjdk: be45d20302/centos/8u282-8.52.0.23/Dockerfile.
Add config for eager / lazy connection initialization in ResourcePool
Description
Currently, when multiple tasks are launched, each of them eagerly initializes a full pool's worth of connections to the coordinator.
While this is acceptable when the parameter for number of eagerConnections (== maxSize) is small, this can be problematic in environments where it's a large value (say 1000) and multiple tasks are launched simultaneously, which can cause a large number of connections to be created to the coordinator, thereby overwhelming it.
Patch
Nodes like the broker may require eager initialization of resources and do not create connections with the Coordinator.
It is unnecessary to do this with other types of nodes.
A config parameter eagerInitialization is added, which when set to true, initializes the max permissible connections when ResourcePool is initialized.
If set to false, lazy initialization of connection resources takes place.
NOTE: All nodes except the broker have this new parameter set to false in the quickstart as part of this PR
Algorithm
The current implementation relies on the creation of maxSize resources eagerly.
The new implementation's behaviour is as follows:
If a resource has been previously created and is available, lend it.
Else if the number of created resources is less than the allowed parameter, create and lend it.
Else, wait for one of the lent resources to be returned.
There aren't any changes in this patch that improve Java 11
compatibility; these changes have already been done separately. This
patch merely updates documentation and explicit Java version checks.
The log message adjustments in DruidProcessingConfig are there to make
things a little nicer when running in Java 11, where we can't measure
direct memory _directly_, and so we may auto-size processing buffers
incorrectly.
This PR changes the value of the property `druid.sql.planner.useGroupingSetForExactDistinct` from `false` to `true` in the runtime.properties files, so that newer installations have this property as `true`, while the default still remains as `false`.
The flag determines how queries which contain an aggregation over `DISTINCT` like `SELECT COUNT(DISTINCT foo.dim1) FILTER(WHERE foo.cnt = 1), SUM(foo.cnt) FROM druid.foo` get planned by Calcite. With the flag being set to false, it plans it via joins, whereas with it being set to true, the query is set using grouping sets.
There is a known issue with Calcite (https://github.com/apache/druid/issues/7953), where an NPE is thrown while planning the above query with joins. There is no such issue while planning the query using grouping sets.
Fixes#10744
Fixes:
./bin/node.sh: 44: ./bin/node.sh: source: not found
Could not find java - please run /opt/druid/apache-druid-0.20.0/bin/verify-java to confirm it is installed.
* apply log file rolling strategy
* fix doc
Signed-off-by: frank chen <frank.chen021@outlook.com>
* Use absolute log path and allow spaces in log path
* Update log4j2 configuration
* apply FileAppender to ZooKeeper
* DO NOT redirect application's console log to file in supervisor
changes:
* adds new config, druid.expressions.useStrictBooleans which make longs the official boolean type of all expressions
* vectorize logical operators and boolean functions, some only if useStrictBooleans is true
Add support for hadoop 3 profiles . Most of the details are captured in #11791 .
We use a combination of maven profiles and resource filtering to achieve this. Hadoop2 is supported by default and a new maven profile with the name hadoop3 is created. This will allow the user to choose the profile which is best suited for the use case.
Quote the $java_exec var in examples/bin/verify-java to support spaces in DRUID_JAVA_HOME/JAVA_HOME. At present, the steps before and after the version check properly quote the path, but the version check spuriously fails when pointing to a Java 8 install that has a space in its path.
* first pass compaction refactor. includes updated behavior for queryGranularity. removes duplicated doc
* fix links, typos, some reorganization
* fix spelling. TBD still there for work in progress
* updates tutorial examples, adds more clarification around compaction use cases
* add granularity spec to automatic compaction config
* final edits
* spelling fixes
* apply suggestions from review
* upadtes from review
* last edits
* move note
* clarify null
* fix links & spelling
* latest review
* edits to auto-compaction config
* add back rollup
* fix links & spelling
* Update compaction.md
add granularityspec to example
* Ability to use mirror of archive.apache.org
* Ability to use mirror of archive.apache.org: documentation
* Ability to use mirror of archive.apache.org: fix int test Dockerfile: missing COPY instruction
Added the status/selfDiscovered endpoint to indexer. Per the api-reference doc, all services support status/selfDiscovered endpoint. So this change would fix that expected behavior.
Also added example config files for indexer process that can be used to spin up the indexer process.
* support unit suffix on byte-related properties
* add doc
* change default value of byte-related properites in example files
* fix coding style
* fix doc
* fix CI
* suppress spelling errors
* improve code according to comments
* rename Bytes to HumanReadableBytes
* add getBytesInInt to get value safely
* improve doc
* fix problem reported by CI
* fix problem reported by CI
* resolve code review comments
* improve error message
* improve code & doc according to comments
* fix CI problem
* improve doc
* suppress spelling check errors
* WIP integration tests
* Add integration test for ingestion with transformSpec
* WIP almost working tests
* Add ignored tests
* checkstyle stuff
* remove newPage from index task ingestion spec
* more test cleanup
* still not quite working
* Actually disable the tests
* working tests
* fix codestyle
* dont use junit in integration tests
* actually fix the bug
* fix checkstyle
* bring index tests closer to reindex tests