* Address security vulnerabilities CVSS >= 7
Update dependencies to address security vulnerabilities with CVSS scores
of 7 or higher. A new Travis CI job is added to prevent new
high/critical security vulnerabilities from being added.
Updated dependencies:
- api-util 1.0.0 -> 1.0.3
- jackson 2.9.10 -> 2.10.1
- kafka 2.1.0 -> 2.1.1
- libthrift 0.10.0 -> 0.13.0
- protobuf 3.2.0 -> 3.11.0
The following high/critical security vulnerabilities are currently
suppressed (so that the new Travis CI job can be added now) and are left
as future work to fix:
- hibernate-validator:5.2.5
- jackson-mapper-asl:1.9.13
- libthrift:0.6.1
- netty:3.10.6
- nimbus-jose-jwt:4.41.1
* Rename EDL1 license file
* Fix inspection errors
* Add FileUtils.createTempDir() and enforce its usage.
The purpose of this is to improve error messages. Previously, the error
message on a nonexistent or unwritable temp directory would be
"Failed to create directory within 10,000 attempts".
* Further updates.
* Another update.
* Remove commons-io from benchmark.
* Fix tests.
* use peekable iterator for numeric column selector null checking instead of bitmap.get for those sweet sweet nanoseconds
* remove unused method
* slight optimization i think
* remove clone from wrappers since we do not use and is confusing
* fixes and tests
* int instead of Integer
* fix it
* fixes, more tests
* fix
* sketch of broker parallel merges done in small batches on fork join pool
* fix non-terminating sequences, auto compute parallelism
* adjust benches
* adjust benchmarks
* now hella more faster, fixed dumb
* fix
* remove comments
* log.info for debug
* javadoc
* safer block for sequence to yielder conversion
* refactor LifecycleForkJoinPool into LifecycleForkJoinPoolProvider which wraps a ForkJoinPool
* smooth yield rate adjustment, more logs to help tune
* cleanup, less logs
* error handling, bug fixes, on by default, more parallel, more tests
* remove unused var
* comments
* timeboundary mergeFn
* simplify, more javadoc
* formatting
* pushdown config
* use nanos consistently, move logs back to debug level, bit more javadoc
* static terminal result batch
* javadoc for nullability of createMergeFn
* cleanup
* oops
* fix race, add docs
* spelling, remove todo, add unhandled exception log
* cleanup, revert unintended change
* another unintended change
* review stuff
* add ParallelMergeCombiningSequenceBenchmark, fixes
* hyper-threading is the enemy
* fix initial start delay, lol
* parallelism computer now balances partition sizes to partition counts using sqrt of sequence count instead of sequence count by 2
* fix those important style issues with the benchmarks code
* lazy sequence creation for benchmarks
* more benchmark comments
* stable sequence generation time
* update defaults to use 100ms target time, 4096 batch size, 16384 initial yield, also update user docs
* add jmh thread based benchmarks, cleanup some stuff
* oops
* style
* add spread to jmh thread benchmark start range, more comments to benchmarks parameters and purpose
* retool benchmark to allow modeling more typical heterogenous heavy workloads
* spelling
* fix
* refactor benchmarks
* formatting
* docs
* add maxThreadStartDelay parameter to threaded benchmark
* why does catch need to be on its own line but else doesnt
* IndexerSQLMetadataStorageCoordinator.getTimelineForIntervalsWithHandle() don't fetch abutting intervals; simplify getUsedSegmentsForIntervals()
* Add VersionedIntervalTimeline.findNonOvershadowedObjectsInInterval() method; Propagate the decision about whether only visible segmetns or visible and overshadowed segments should be returned from IndexerMetadataStorageCoordinator's methods to the user logic; Rename SegmentListUsedAction to RetrieveUsedSegmentsAction, SegmetnListUnusedAction to RetrieveUnusedSegmentsAction, and UsedSegmentLister to UsedSegmentsRetriever
* Fix tests
* More fixes
* Add javadoc notes about returning Collection instead of Set. Add JacksonUtils.readValue() to reduce boilerplate code
* Fix KinesisIndexTaskTest, factor out common parts from KinesisIndexTaskTest and KafkaIndexTaskTest into SeekableStreamIndexTaskTestBase
* More test fixes
* More test fixes
* Add a comment to VersionedIntervalTimelineTestBase
* Fix tests
* Set DataSegment.size(0) in more tests
* Specify DataSegment.size(0) in more places in tests
* Fix more tests
* Fix DruidSchemaTest
* Set DataSegment's size in more tests and benchmarks
* Fix HdfsDataSegmentPusherTest
* Doc changes addressing comments
* Extended doc for visibility
* Typo
* Typo 2
* Address comment
* remove select query
* thanks teamcity
* oops
* oops
* add back a SelectQuery class that throws RuntimeExceptions linking to docs
* adjust text
* update docs per review
* deprecated
* Stateful auto compaction
* javaodc
* add removed test back
* fix test
* adding indexSpec to compactionState
* fix build
* add lastCompactionState
* address comments
* extract CompactionState
* fix doc
* fix build and test
* Add a task context to store compaction state; add javadoc
* fix it test
* IOConfig for compaction task
* add javadoc, doc, unit test
* fix webconsole test
* add spelling
* address comments
* fix build and test
* address comments
* Fix dependency analyze warnings
Update the maven dependency plugin to the latest version and fix all
warnings for unused declared and used undeclared dependencies in the
compile scope. Added new travis job to add the check to CI. Also fixed
some source code files to use the correct packages for their imports and
updated druid-forbidden-apis to prevent regressions.
* Address review comments
* Adjust scope for org.glassfish.jaxb:jaxb-runtime
* Fix dependencies for hdfs-storage
* Consolidate netty4 versions
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* check ctyle for constant field name
* merging with upstream
* review-1
* unknow changes
* unknow changes
* review-2
* merging with master
* review-2 1 changes
* review changes-2 2
* bug fix
* Enable code coverage
Code coverage was disabled via
https://github.com/apache/incubator-druid/pull/3122 due to an issue with
cobertura in Travis CI. Switch code coverage tool from cobertura to
jacoco to avoid issue and re-enable coveralls for Travis CI.
* Exclude non-production code
* Exclude benchmark generated code
* Exclude DruidTestRunnerFactory
* GroupBy array-based result rows.
Fixes#8118; see that proposal for details.
Other than the GroupBy changes, the main other "interesting" classes are:
- ResultRow: The array-based result type.
- BaseQuery: T is no longer required to be Comparable.
- QueryToolChest: Adds "decorateObjectMapper" to enable query-aware serialization
and deserialization of result rows (necessary due to their positional nature).
- QueryResource: Uses the new decoration functionality.
- DirectDruidClient: Also uses the new decoration functionality.
- QueryMaker (in Druid SQL): Modifications to read ResultRows.
These classes weren't changed, but got some new javadocs:
- BySegmentQueryRunner
- FinalizeResultsQueryRunner
- Query
* Adjustments for TC stuff.
* Fix dependency analyze warnings
Update the maven dependency plugin to the latest version and fix all
warnings for unused declared and used undeclared dependencies in the
compile scope. Added new travis job to add the check to CI. Also fixed
some source code files to use the correct packages for their imports.
* Fix licenses and dependencies
* Fix licenses and dependencies again
* Fix integration test dependency
* Address review comments
* Fix unit test dependencies
* Fix integration test dependency
* Fix integration test dependency again
* Fix integration test dependency third time
* Fix integration test dependency fourth time
* Fix compile error
* Fix assert package
* add CachingClusteredClient benchmark, refactor some stuff
* revert WeightedServerSelectorStrategy to ConnectionCountServerSelectorStrategy and remove getWeight since felt artificial, default mergeResults in toolchest implementation for topn, search, select
* adjust javadoc
* adjustments
* oops
* use it
* use BinaryOperator, remove CombiningFunction, use Comparator instead of Ordering, other review adjustments
* rename createComparator to createResultComparator, fix typo, firstNonNull nullable parameters
* Benchmarks: New SqlBenchmark, add caching & vectorization to some others.
- Introduce a new SqlBenchmark geared towards benchmarking a wide
variety of SQL queries. Rename the old SqlBenchmark to
SqlVsNativeBenchmark.
- Add (optional) caching to SegmentGenerator to enable easier
benchmarking of larger segments.
- Add vectorization to FilteredAggregatorBenchmark and GroupByBenchmark.
* Query vectorization.
This patch includes vectorized timeseries and groupBy engines, as well
as some analogs of your favorite Druid classes:
- VectorCursor is like Cursor. (It comes from StorageAdapter.makeVectorCursor.)
- VectorColumnSelectorFactory is like ColumnSelectorFactory, and it has
methods to create analogs of the column selectors you know and love.
- VectorOffset and ReadableVectorOffset are like Offset and ReadableOffset.
- VectorAggregator is like BufferAggregator.
- VectorValueMatcher is like ValueMatcher.
There are some noticeable differences between vectorized and regular
execution:
- Unlike regular cursors, vector cursors do not understand time
granularity. They expect query engines to handle this on their own,
which a new VectorCursorGranularizer class helps with. This is to
avoid too much batch-splitting and to respect the fact that vector
selectors are somewhat more heavyweight than regular selectors.
- Unlike FilteredOffset, FilteredVectorOffset does not leverage indexes
for filters that might partially support them (like an OR of one
filter that supports indexing and another that doesn't). I'm not sure
that this behavior is desirable anyway (it is potentially too eager)
but, at any rate, it'd be better to harmonize it between the two
classes. Potentially they should both do some different thing that
is smarter than what either of them is doing right now.
- When vector cursors are created by QueryableIndexCursorSequenceBuilder,
they use a morphing binary-then-linear search to find their start and
end rows, rather than linear search.
Limitations in this patch are:
- Only timeseries and groupBy have vectorized engines.
- GroupBy doesn't handle multi-value dimensions yet.
- Vector cursors cannot handle virtual columns or descending order.
- Only some filters have vectorized matchers: "selector", "bound", "in",
"like", "regex", "search", "and", "or", and "not".
- Only some aggregators have vectorized implementations: "count",
"doubleSum", "floatSum", "longSum", "hyperUnique", and "filtered".
- Dimension specs other than "default" don't work yet (no extraction
functions or filtered dimension specs).
Currently, the testing strategy includes adding vectorization-enabled
tests to TimeseriesQueryRunnerTest, GroupByQueryRunnerTest,
GroupByTimeseriesQueryRunnerTest, CalciteQueryTest, and all of the
filtering tests that extend BaseFilterTest. In all of those classes,
there are some test cases that don't support vectorization. They are
marked by special function calls like "cannotVectorize" or "skipVectorize"
that tell the test harness to either expect an exception or to skip the
test case.
Testing should be expanded in the future -- a project in and of itself.
Related to #3011.
* WIP
* Adjustments for unused things.
* Adjust javadocs.
* DimensionDictionarySelector adjustments.
* Add "clone" to BatchIteratorAdapter.
* ValueMatcher javadocs.
* Fix benchmark.
* Fixups post-merge.
* Expect exception on testGroupByWithStringVirtualColumn for IncrementalIndex.
* BloomDimFilterSqlTest: Tag two non-vectorizable tests.
* Minor adjustments.
* Update surefire, bump up Xmx in Travis.
* Some more adjustments.
* Javadoc adjustments
* AggregatorAdapters adjustments.
* Additional comments.
* Remove switching search.
* Only missiles.
* AggregatorUtil should cache parsed expression to avoid memory problem (OOM/FGC) when Expression is used in metricsSpec
* remove debug log check in Parser.parse
* remove cache and use suppliers.memorize
* Add checkstyle for "Local variable names shouldn't start with capital"
* Adjust some local variables to constants
* Replace StringUtils.LINE_SEPARATOR with System.lineSeparator()
* Moved Scan Builder to Druids class and started on Scan Benchmark setup
* Need to form queries
* It runs.
* Stuff for time-ordered scan query
* Move ScanResultValue timestamp comparator to a separate class for testing
* Licensing stuff
* Change benchmark
* Remove todos
* Added TimestampComparator tests
* Change number of benchmark iterations
* Added time ordering to the scan benchmark
* Changed benchmark params
* More param changes
* Benchmark param change
* Made Jon's changes and removed TODOs
* Broke some long lines into two lines
* nit
* Decrease segment size for less memory usage
* Wrote tests for heapsort scan result values and fixed bug where iterator
wasn't returning elements in correct order
* Wrote more tests for scan result value sort
* Committing a param change to kick teamcity
* Fixed codestyle and forbidden API errors
* .
* Improved conciseness
* nit
* Created an error message for when someone tries to time order a result
set > threshold limit
* Set to spaces over tabs
* Fixing tests WIP
* Fixed failing calcite tests
* Kicking travis with change to benchmark param
* added all query types to scan benchmark
* Fixed benchmark queries
* Renamed sort function
* Added javadoc on ScanResultValueTimestampComparator
* Unused import
* Added more javadoc
* improved doc
* Removed unused import to satisfy PMD check
* Small changes
* Changes based on Gian's comments
* Fixed failing test due to null resultFormat
* Added config and get # of segments
* Set up time ordering strategy decision tree
* Refactor and pQueue works
* Cleanup
* Ordering is correct on n-way merge -> still need to batch events into
ScanResultValues
* WIP
* Sequence stuff is so dirty :(
* Fixed bug introduced by replacing deque with list
* Wrote docs
* Multi-historical setup works
* WIP
* Change so batching only occurs on broker for time-ordered scans
Restricted batching to broker for time-ordered queries and adjusted
tests
Formatting
Cleanup
* Fixed mistakes in merge
* Fixed failing tests
* Reset config
* Wrote tests and added Javadoc
* Nit-change on javadoc
* Checkstyle fix
* Improved test and appeased TeamCity
* Sorry, checkstyle
* Applied Jon's recommended changes
* Checkstyle fix
* Optimization
* Fixed tests
* Updated error message
* Added error message for UOE
* Renaming
* Finish rename
* Smarter limiting for pQueue method
* Optimized n-way merge strategy
* Rename segment limit -> segment partitions limit
* Added a bit of docs
* More comments
* Fix checkstyle and test
* Nit comment
* Fixed failing tests -> allow usage of all types of segment spec
* Fixed failing tests -> allow usage of all types of segment spec
* Revert "Fixed failing tests -> allow usage of all types of segment spec"
This reverts commit ec470288c7.
* Revert "Merge branch '6088-Time-Ordering-On-Scans-N-Way-Merge' of github.com:justinborromeo/incubator-druid into 6088-Time-Ordering-On-Scans-N-Way-Merge"
This reverts commit 57033f36df, reversing
changes made to 8f01d8dd16.
* Check type of segment spec before using for time ordering
* Fix bug in numRowsScanned
* Fix bug messing up count of rows
* Fix docs and flipped boolean in ScanQueryLimitRowIterator
* Refactor n-way merge
* Added test for n-way merge
* Refixed regression
* Checkstyle and doc update
* Modified sequence limit to accept longs and added test for long limits
* doc fix
* Implemented Clint's recommendations
* Throw caught exception.
* Throw caught exceptions.
* Related checkstyle rule is added to prevent further bugs.
* RuntimeException() is used instead of Throwables.propagate().
* Missing import is added.
* Throwables are propogated if possible.
* Throwables are propogated if possible.
* Throwables are propogated if possible.
* Throwables are propogated if possible.
* * Checkstyle definition is improved.
* Throwables.propagate() usages are removed.
* Checkstyle pattern is changed for only scanning "Throwables.propagate(" instead of checking lookbehind.
* Throwable is kept before firing a Runtime Exception.
* Fix unused assignments.
* Moved Scan Builder to Druids class and started on Scan Benchmark setup
* Need to form queries
* It runs.
* Remove todos
* Change number of benchmark iterations
* Changed benchmark params
* More param changes
* Made Jon's changes and removed TODOs
* Broke some long lines into two lines
* Decrease segment size for less memory usage
* Committing a param change to kick teamcity
* Prohibit assigning concurrent maps into Map-types variables and fields; Fix a race condition in CoordinatorRuleManager; improve logic in DirectDruidClient and ResourcePool
* Enforce that if compute(), computeIfAbsent(), computeIfPresent() or merge() is called on a ConcurrentHashMap, it's stored in a ConcurrentHashMap-typed variable, not ConcurrentMap; add comments explaining get()-before-computeIfAbsent() optimization; refactor Counters; fix a race condition in Intialization.java
* Remove unnecessary comment
* Checkstyle
* Fix getFromExtensions()
* Add a reference to the comment about guarded computeIfAbsent() optimization; IdentityHashMap optimization
* Fix UriCacheGeneratorTest
* Workaround issue with MaterializedViewQueryQueryToolChest
* Strengthen Appenderator's contract regarding concurrency
* Add published segment cache in broker
* Change the DataSegment interner so it's not based on DataSEgment's equals only and size is preserved if set
* Added a trueEquals to DataSegment class
* Use separate interner for realtime and historical segments
* Remove trueEquals as it's not used anymore, change log message
* PR comments
* PR comments
* Fix tests
* PR comments
* Few more modification to
* change the coordinator api
* removeall segments at once from MetadataSegmentView in order to serve a more consistent view of published segments
* Change the poll behaviour to avoid multiple poll execution at same time
* minor changes
* PR comments
* PR comments
* Make the segment cache in broker off by default
* Added a config to PlannerConfig
* Moved MetadataSegmentView to sql module
* Add doc for new planner config
* Update documentation
* PR comments
* some more changes
* PR comments
* fix test
* remove unintentional change, whether to synchronize on lifecycleLock is still in discussion in PR
* minor changes
* some changes to initialization
* use pollPeriodInMS
* Add boolean cachePopulated to check if first poll succeeds
* Remove poll from start()
* take the log message out of condition in stop()
Jonathan Wei
Clint Wylie
Chi Cao Minh
jon-wei
Alexander Saydakov
Gian Merlino
Roman Leventov
Jihoon Son
SandishKumarHN
Eugene Sevastianov
Xue Yu
Benedict Jin
BIGrey
Merlin Lee
Justin Borromeo
Furkan KAMACI
Surekha