Commit Graph

744 Commits

Author SHA1 Message Date
Clint Wylie b55657cc26
fix protobuf extension packaging and docs (#9320)
* fix protobuf extension packaging and docs

* fix paths

* Update protobuf.md

* Update protobuf.md
2020-02-07 09:26:52 -08:00
Lucas Capistrant 53bb45fc9a
Forbid easily misused HashSet and HashMap constructors (#9165)
* Forbid easily misused HashSet and HashMap constructors

* Add two LinkedHashMap constructors to forbidden-apis and create utility method as replacement for them

* Fix visibility of constant in CollectionUtils.java

* Make an exception for an instance of LinkedHashMap#<init>(int) because proper sizing is used

* revert changes to sql module tests that should be in separate PR

* Finish reverting changes to sql module tests that were flagged in checkstyle during CI

* Add netty dependency resulting from SupressForbidden
2020-02-07 10:44:09 +03:00
Gian Merlino 3ef5c2f2e8
Add MemoryOpenHashTable, a table similar to ByteBufferHashTable. (#9308)
* Add MemoryOpenHashTable, a table similar to ByteBufferHashTable.

With some key differences to improve speed and design simplicity:

1) Uses Memory rather than ByteBuffer for its backing storage.
2) Uses faster hashing and comparison routines (see HashTableUtils).
3) Capacity is always a power of two, allowing simpler design and more
   efficient implementation of findBucket.
4) Does not implement growability; instead, leaves that to its callers.
   The idea is this removes the need for subclasses, while still giving
   callers flexibility in how to handle table-full scenarios.

* Fix LGTM warnings.

* Adjust dependencies.

* Remove easymock from druid-benchmarks.

* Adjustments from review.

* Fix datasketches unit tests.

* Fix checkstyle.
2020-02-04 19:57:59 -08:00
zachjsh 768d60c7b4
Get larger batch of input files when using native batch with google cloud (#9307)
By default native batch ingestion was only getting a batch of 10
files at a time when used with google cloud. The Default for other
cloud providers is 1024, and should be similar for google cloud.
The low batch size was caused by mistype. This change updates the
batch size to 1024 when using google cloud.
2020-02-04 12:03:32 -08:00
Clint Wylie 5c541f556b
remove log.info from FixedBucketsHistogramAggregator aggregate method (#9309) 2020-02-04 11:52:50 -08:00
Suneet Saldanha 33a97dfaae
Guicify druid sql module (#9279)
* Guicify druid sql module

Break up the SQLModule in to smaller modules and provide a binding that
modules can use to register schemas with druid sql.

* fix some tests

* address code review

* tests compile

* Working tests

* Add all the tests

* fix up licenses and dependencies

* add calcite dependency to druid-benchmarks

* tests pass

* rename the schemas
2020-02-04 11:33:48 -08:00
Gian Merlino b411443d22
SQL join support for lookups. (#9294)
* SQL join support for lookups.

1) Add LookupSchema to SQL, so lookups show up in the catalog.
2) Add join-related rels and rules to SQL, allowing joins to be planned into
   native Druid queries.

* Add two missing LookupSchema calls in tests.

* Fix tests.

* Fix typo.
2020-01-31 23:51:16 -08:00
Gian Merlino 660f8838f4
Allow HdfsDataSegmentKiller to be instantiated without storageDirectory set. (#9296)
This is important because if a user has the hdfs extension loaded, but is not
using hdfs deep storage, then they will not have storageDirectory set and will
get the following error:

  IllegalArgumentException: Can not create a Path from an empty string
    at io.druid.storage.hdfs.HdfsDataSegmentKiller.<init>(HdfsDataSegmentKiller.java:47)

This scenario is realistic: it comes up when someone has the hdfs extension
loaded because they want to use HdfsInputSource, but don't want to use hdfs for
deep storage.

Fixes #4694.
2020-01-31 23:50:48 -08:00
Gian Merlino 204ba9966f
Add LookupJoinableFactory. (#9281)
* Add LookupJoinableFactory.

Enables joins where the right-hand side is a lookup. Includes an
integration test.

Also, includes changes to LookupExtractorFactoryContainerProvider:

1) Add "getAllLookupNames", which will be needed to eventually connect
   lookups to Druid's SQL catalog.
2) Convert "get" from nullable to Optional return.
3) Swap out most usages of LookupReferencesManager in favor of the
   simpler LookupExtractorFactoryContainerProvider interface.

* Fixes for tests.

* Fix another test.

* Java 11 message fix.

* Fixups.

* Fixup benchmark class.
2020-01-30 14:46:21 -08:00
Suneet Saldanha 303b02eba1
intelliJ inspections cleanup (#9260)
* intelliJ inspections cleanup

- remove redundant escapes
- performance warnings
- access static member via instance reference
- static method declared final
- inner class may be static

Most of these changes are aesthetic, however, they will allow inspections to
be enabled as part of CI checks going forward

The valuable changes in this delta are:
- using StringBuilder instead of string addition in a loop
    indexing-hadoop/.../Utils.java
    processing/.../ByteBufferMinMaxOffsetHeap.java
- Use class variables instead of static variables for parameterized test
    processing/src/.../ScanQueryLimitRowIteratorTest.java

* Add intelliJ inspection warnings as errors to druid profile

* one more static inner class
2020-01-29 11:50:52 -08:00
Roman Leventov b9186f8f9f Reconcile terminology and method naming to 'used/unused segments'; Rename MetadataSegmentManager to MetadataSegmentsManager (#7306)
* Reconcile terminology and method naming to 'used/unused segments'; Don't use terms 'enable/disable data source'; Rename MetadataSegmentManager to MetadataSegments; Make REST API methods which mark segments as used/unused to return server error instead of an empty response in case of error

* Fix brace

* Import order

* Rename withKillDataSourceWhitelist to withSpecificDataSourcesToKill

* Fix tests

* Fix tests by adding proper methods without interval parameters to IndexerMetadataStorageCoordinator instead of hacking with Intervals.ETERNITY

* More aligned names of DruidCoordinatorHelpers, rename several CoordinatorDynamicConfig parameters

* Rename ClientCompactTaskQuery to ClientCompactionTaskQuery for consistency with CompactionTask; ClientCompactQueryTuningConfig to ClientCompactionTaskQueryTuningConfig

* More variable and method renames

* Rename MetadataSegments to SegmentsMetadata

* Javadoc update

* Simplify SegmentsMetadata.getUnusedSegmentIntervals(), more javadocs

* Update Javadoc of VersionedIntervalTimeline.iterateAllObjects()

* Reorder imports

* Rename SegmentsMetadata.tryMark... methods to mark... and make them to return boolean and the numbers of segments changed and relay exceptions to callers

* Complete merge

* Add CollectionUtils.newTreeSet(); Refactor DruidCoordinatorRuntimeParams creation in tests

* Remove MetadataSegmentManager

* Rename millisLagSinceCoordinatorBecomesLeaderBeforeCanMarkAsUnusedOvershadowedSegments to leadingTimeMillisBeforeCanMarkAsUnusedOvershadowedSegments

* Fix tests, refactor DruidCluster creation in tests into DruidClusterBuilder

* Fix inspections

* Fix SQLMetadataSegmentManagerEmptyTest and rename it to SqlSegmentsMetadataEmptyTest

* Rename SegmentsAndMetadata to SegmentsAndCommitMetadata to reduce the similarity with SegmentsMetadata; Rename some methods

* Rename DruidCoordinatorHelper to CoordinatorDuty, refactor DruidCoordinator

* Unused import

* Optimize imports

* Rename IndexerSQLMetadataStorageCoordinator.getDataSourceMetadata() to retrieveDataSourceMetadata()

* Unused import

* Update terminology in datasource-view.tsx

* Fix label in datasource-view.spec.tsx.snap

* Fix lint errors in datasource-view.tsx

* Doc improvements

* Another attempt to please TSLint

* Another attempt to please TSLint

* Style fixes

* Fix IndexerSQLMetadataStorageCoordinator.createUsedSegmentsSqlQueryForIntervals() (wrong merge)

* Try to fix docs build issue

* Javadoc and spelling fixes

* Rename SegmentsMetadata to SegmentsMetadataManager, address other comments

* Address more comments
2020-01-27 11:24:29 -08:00
Clint Wylie c6c8b80644 fix build by updating kafka client to 2.2.2 for CVE-2019-12399 (#9259)
* fix build by updating kafka client to 2.2.2 for CVE-2019-12399

* one kafka version to rule them all

* notice
2020-01-27 11:07:02 -08:00
Gian Merlino 19b427e8f3
Add JoinableFactory interface and use it in the query stack. (#9247)
* Add JoinableFactory interface and use it in the query stack.

Also includes InlineJoinableFactory, which enables joining against
inline datasources. This is the first patch where a basic join query
actually works. It includes integration tests.

* Fix test issues.

* Adjustments from code review.
2020-01-24 13:10:01 -08:00
Gian Merlino d21054f7c5
Remove the deprecated interval-chunking stuff. (#9216)
* Remove the deprecated interval-chunking stuff.

See https://github.com/apache/druid/pull/6591, https://github.com/apache/druid/pull/4004#issuecomment-284171911 for details.

* Remove unused import.

* Remove chunkInterval too.
2020-01-19 17:14:23 -08:00
Fokko Driesprong 486c0fd149 Bump Apache Parquet to 1.11.0 (#9129)
* Bump Parquet to 1.11.0

* Update licenses.yaml

* Add parquet-format-structures
2020-01-16 16:24:25 -08:00
Gian Merlino a87db7f353
Add HashJoinSegment, a virtual segment for joins. (#9111)
* Add HashJoinSegment, a virtual segment for joins.

An initial step towards #8728. This patch adds enough functionality to implement a joining
cursor on top of a normal datasource. It does not include enough to actually do a query. For
that, future patches will need to wire this low-level functionality into the query language.

* Fixups.

* Fix missing format argument.

* Various tests and minor improvements.

* Changes.

* Remove or add tests for unused stuff.

* Fix up package locations.
2020-01-16 13:14:20 -08:00
Chi Cao Minh 1fd05bef9a Add jackson-mapper-asl for hdfs-storage extension (#9178)
Previously jackson-mapper-asl was excluded to remove a security
vulnerability; however, it is required for functionality (e.g.,
org.apache.hadoop.security.token.delegation.web.DelegationTokenAuthenticator).
2020-01-14 09:50:45 -08:00
Atul Mohan ea51bc45bf Fix nullhandling in tests (#9119) 2020-01-12 20:19:12 -08:00
Clint Wylie 85219ece13 fix null handling for arithmetic post aggregator comparator (#9159)
* fix null handling for arithmetic postagg comparator, add test for comparator for min/max/quantile postaggs in histogram ext

* fix
2020-01-10 13:49:19 -08:00
Jihoon Son e27a1e8604
Fix handling nullable writableComparable in OrcStructConverter (#9138)
* Handle nullable writableComparable in OrcStructConverter

* add missing dependency
2020-01-08 13:40:24 -08:00
Clint Wylie f540216931 fix InputFormat serde issue with SeekableStream based supervisors (#9136) 2020-01-07 16:18:54 -06:00
Clint Wylie 7af85250cb null handling for doubles sketch and array of doubles sketch aggs (#9112)
* doubles sketch and array of doubles sketch aggs now skip rows with nulls in sql compatible null handling mode

* formatting
2020-01-07 14:15:32 -06:00
Suneet Saldanha bdd0d0d8a5 Add avro dependency to parquet extension (#9124)
* Add avro dependency to parquet extension

If the parquet extension is loaded and an ingestionSpec uses the older format
specifying a 'parser' instead of using an 'inputFormat' the job fails
with the following error

java.lang.TypeNotPresentException: Type org.apache.avro.generic.GenericRecord not present

This change removes the exclusion of the avro package so that the missing
class can be found.

* Address review comments and add dependency version
2020-01-03 20:11:13 -06:00
Jonathan Wei aa539177ec De-incubation cleanup in code, docs, packaging (#9108)
* De-incubation cleanup in code, docs, packaging

* remove unused docs script
2020-01-03 12:33:19 -05:00
Jonathan Wei 4e8368a5d9 Set version to 0.18.0-SNAPSHOT (#9109) 2020-01-02 17:55:10 -05:00
Gian Merlino 18eb456fe6
S3: Improvements to prefix listing (including fix for an infinite loop) (#9098)
* S3: Improvements to prefix listing (including fix for an infinite loop)

1) Fixes #9097, an infinite loop that occurs when more than one batch
   of objects is retrieved during a prefix listing.

2) Removes the Access Denied fallback code added in #4444. I don't think
   the behavior is reasonable: its purpose is to fall back from a prefix
   listing to a single-object access, but it's only activated when the
   end user supplied a prefix, so it would be better to simply fail, so
   the end user knows that their request for a prefix-based load is not
   going to work. Presumably the end user can switch from supplying
   'prefixes' to supplying 'uris' if desired.

3) Filters out directory placeholders when walking prefixes.

4) Splits LazyObjectSummariesIterator into its own class and adds tests.

* Adjust S3InputSourceTest.

* Changes from review.

* Include hamcrest-core.
2019-12-31 19:06:49 -05:00
Chi Cao Minh 513bb1f6da Get proper Kinesis index task AWS credentials (#9082)
Previously, the configured S3 credentials would be used instead of the
ones configured for Kinesis for Kinesis index tasks.
2019-12-20 19:35:05 -08:00
Jihoon Son 66056b2826
Using annotation to distinguish Hadoop Configuration in each module (#9013)
* Multibinding for NodeRole

* Fix endpoints

* fix doc

* fix test

* Using annotation to distinguish Hadoop Configuration in each module
2019-12-11 17:30:44 -08:00
Jonathan Wei 8af41d7cd0 Update version to 0.18.0-incubating-SNAPSHOT (#9009) 2019-12-11 14:04:03 -08:00
Chi Cao Minh 3de7ab8523 DataSketches jars in core (#9003)
Having DataSketches jars in core will allow potential improvements, for
example:
- Provide an alternative implementation of HLL:
  https://datasketches.github.io/docs/HLL/HllSketchVsDruidHyperLogLogCollector.html
- Range partitioning for native parallel batch indexing without having
  the user load extensions on the classpath

Dev mailing list discussion:
https://lists.apache.org/thread.html/301410d71ff799cf616bf17c4ebcf9999fc30829f5fa62909f403e6c%40%3Cdev.druid.apache.org%3E
2019-12-10 14:02:34 -08:00
Chi Cao Minh bab78fc80e Parallel indexing single dim partitions (#8925)
* Parallel indexing single dim partitions

Implements single dimension range partitioning for native parallel batch
indexing as described in #8769. This initial version requires the
druid-datasketches extension to be loaded.

The algorithm has 5 phases that are orchestrated by the supervisor in
`ParallelIndexSupervisorTask#runRangePartitionMultiPhaseParallel()`.
These phases and the main classes involved are described below:

1) In parallel, determine the distribution of dimension values for each
   input source split.

   `PartialDimensionDistributionTask` uses `StringSketch` to generate
   the approximate distribution of dimension values for each input
   source split. If the rows are ungrouped,
   `PartialDimensionDistributionTask.UngroupedRowDimensionValueFilter`
   uses a Bloom filter to skip rows that would be grouped. The final
   distribution is sent back to the supervisor via
   `DimensionDistributionReport`.

2) The range partitions are determined.

   In `ParallelIndexSupervisorTask#determineAllRangePartitions()`, the
   supervisor uses `StringSketchMerger` to merge the individual
   `StringSketch`es created in the preceding phase. The merged sketch is
   then used to create the range partitions.

3) In parallel, generate partial range-partitioned segments.

   `PartialRangeSegmentGenerateTask` uses the range partitions
   determined in the preceding phase and
   `RangePartitionCachingLocalSegmentAllocator` to generate
   `SingleDimensionShardSpec`s.  The partition information is sent back
   to the supervisor via `GeneratedGenericPartitionsReport`.

4) The partial range segments are grouped.

   In `ParallelIndexSupervisorTask#groupGenericPartitionLocationsPerPartition()`,
   the supervisor creates the `PartialGenericSegmentMergeIOConfig`s
   necessary for the next phase.

5) In parallel, merge partial range-partitioned segments.

   `PartialGenericSegmentMergeTask` uses `GenericPartitionLocation` to
   retrieve the partial range-partitioned segments generated earlier and
   then merges and publishes them.

* Fix dependencies & forbidden apis

* Fixes for integration test

* Address review comments

* Fix docs, strict compile, sketch check, rollup check

* Fix first shard spec, partition serde, single subtask

* Fix first partition check in test

* Misc rewording/refactoring to address code review

* Fix doc link

* Split batch index integration test

* Do not run parallel-batch-index twice

* Adjust last partition

* Split ITParallelIndexTest to reduce runtime

* Rename test class

* Allow null values in range partitions

* Indicate which phase failed

* Improve asserts in tests
2019-12-09 23:05:49 -08:00
Roman Leventov 1c62987783
Add SelfDiscoveryResource; rename org.apache.druid.discovery.No… (#6702)
* Add SelfDiscoveryResource

* Rename org.apache.druid.discovery.NodeType to NodeRole. Refactor CuratorDruidNodeDiscoveryProvider. Make SelfDiscoveryResource to listen to updates only about a single node (itself).

* Extended docs

* Fix brace

* Remove redundant throws in Lifecycle.Handler.stop()

* Import order

* Remove unresolvable link

* Address comments

* tmp

* tmp

* Rollback docker changes

* Remove extra .sh files

* Move filter

* Fix SecurityResourceFilterTest
2019-12-08 18:47:58 +03:00
Chi Cao Minh af74acaa85 Address security vulnerabilities CVSS >= 7 (#8980)
* Address security vulnerabilities CVSS >= 7

Update dependencies to address security vulnerabilities with CVSS scores
of 7 or higher. A new Travis CI job is added to prevent new
high/critical security vulnerabilities from being added.

Updated dependencies:
- api-util 1.0.0 -> 1.0.3
- jackson 2.9.10 -> 2.10.1
- kafka 2.1.0 -> 2.1.1
- libthrift 0.10.0 -> 0.13.0
- protobuf 3.2.0 -> 3.11.0

The following high/critical security vulnerabilities are currently
suppressed (so that the new Travis CI job can be added now) and are left
as future work to fix:
- hibernate-validator:5.2.5
- jackson-mapper-asl:1.9.13
- libthrift:0.6.1
- netty:3.10.6
- nimbus-jose-jwt:4.41.1

* Rename EDL1 license file

* Fix inspection errors
2019-12-05 14:34:35 -08:00
Clint Wylie 5ecdf94d83
add 'prefixes' support to google input source (#8930)
* add prefixes support to google input source, making it symmetrical-ish with s3

* docs

* more better, and tests

* unused

* formatting

* javadoc

* dependencies

* oops

* review comments

* better javadoc
2019-12-04 21:01:10 -08:00
Clint Wylie b4efaa698b unexclude necessary jackson mapper-asl jars (#8977) 2019-12-02 17:01:11 -08:00
Chi Cao Minh 4b7e79a4e6 Exclude unneeded hadoop transitive dependencies (#8962)
* Exclude unneeded hadoop transitive dependencies

These dependencies are provided by core:
- com.squareup.okhttp:okhttp
- commons-beanutils:commons-beanutils
- org.apache.commons:commons-compress
- org.apache.zookepper:zookeeper

These dependencies are not needed and are excluded because they contain
security vulnerabilities:
- commons-beanutils:commons-beanutils-core
- org.codehaus.jackson:jackson-mapper-asl

* Simplify exclusions + separate unneeded/vulnerable

* Do not exclude jackson-mapper-asl
2019-12-02 16:08:21 -08:00
Clint Wylie 6997b167b1 add hdfs client dependency for native batch parquet when using hdfs (#8964) 2019-11-28 13:12:45 -08:00
Jonathan Wei 00ce18a0ea
Additional Kinesis resharding fixes (#8870)
* Additional Kinesis resharding fixes

* Address PR comments

* Remove unused method

* Adjust SegmentTransactionalInsertAction null handling

* Check for unchanged metadata on empty publish

* Add logs for empty publish

* Fix javadoc

* Clear offset when invalid endOffsets are seen

* Fix LGTM alert

* Fix build

* Add resharding note to Kinesis docs

* Checkstyle

* Spelling

* Address PR comments

* Checkstyle
2019-11-28 12:59:01 -08:00
Jihoon Son 86e8903523
Support orc format for native batch ingestion (#8950)
* Support orc format for native batch ingestion

* fix pom and remove wrong comment

* fix unnecessary condition check

* use flatMap back to handle exception properly

* move exceptionThrowingIterator to intermediateRowParsingReader

* runtime
2019-11-28 12:45:24 -08:00
jon-wei dfbc066163 Revert "[maven-release-plugin] prepare release druid-0.16.1-incubating-rc1"
This reverts commit a0f21d9b07.
2019-11-27 23:22:43 -08:00
jon-wei 0402ff85b8 Revert "[maven-release-plugin] prepare for next development iteration"
This reverts commit 8ffa71e7e6.
2019-11-27 23:22:32 -08:00
jon-wei 8ffa71e7e6 [maven-release-plugin] prepare for next development iteration 2019-11-27 23:18:48 -08:00
jon-wei a0f21d9b07 [maven-release-plugin] prepare release druid-0.16.1-incubating-rc1 2019-11-27 23:18:37 -08:00
Clint Wylie 4458113375
S3 input source (#8903)
* add s3 input source for native batch ingestion

* add docs

* fixes

* checkstyle

* lazy splits

* fixes and hella tests

* fix it

* re-use better iterator

* use key

* javadoc and checkstyle

* exception

* oops

* refactor to use S3Coords instead of URI

* remove unused code, add retrying stream to handle s3 stream

* remove unused parameter

* update to latest master

* use list of objects instead of object

* serde test

* refactor and such

* now with the ability to compile

* fix signature and javadocs

* fix conflicts yet again, fix S3 uri stuffs

* more tests, enforce uri for bucket

* javadoc

* oops

* abstract class instead of interface

* null or empty

* better error
2019-11-25 22:31:19 -08:00
Alexander Saydakov 4a9da3f3fc use the latest release of datasketches (#8647)
* use the latest release of datasketches

* added datasketches-memory dependency

* updated datasketches entries

* use datasketches-memory-1.2.0

* updated dependencies

* fixed tests
2019-11-25 19:45:51 -08:00
Clint Wylie cd31bcc093 un-exclude necessary parquet jackson dependencies instead of relying on curator (#8939) 2019-11-25 15:57:34 -08:00
Jihoon Son a2e6de4b16 Fix the potential race between SplittableInputSource.getNumSplits() and SplittableInputSource.createSplits() in TaskMonitor (#8924)
* Fix the potential race SplittableInputSource.getNumSplits() and SplittableInputSource.createSplits() in TaskMonitor

* Fix docs and javadoc

* Add unit tests for large or small estimated num splits

* add override
2019-11-23 01:38:08 -08:00
Gian Merlino e0eb85ace7 Add FileUtils.createTempDir() and enforce its usage. (#8932)
* Add FileUtils.createTempDir() and enforce its usage.

The purpose of this is to improve error messages. Previously, the error
message on a nonexistent or unwritable temp directory would be
"Failed to create directory within 10,000 attempts".

* Further updates.

* Another update.

* Remove commons-io from benchmark.

* Fix tests.
2019-11-22 19:48:49 -08:00
Clint Wylie 7250010388 add parquet support to native batch (#8883)
* add parquet support to native batch

* cleanup

* implement toJson for sampler support

* better binaryAsString test

* docs

* i hate spellcheck

* refactor toMap conversion so can be shared through flattenerMaker, default impls should be good enough for orc+avro, fixup for merge with latest

* add comment, fix some stuff

* adjustments

* fix accident

* tweaks
2019-11-22 10:49:16 -08:00
Jihoon Son 934547a215
RetryingInputEntity to retry on transient errors (#8923)
* RetryingInputEntity to retry on transient errors

* fix some javadoc and httpEntity

* Make it interface

* Javadoc for offset
2019-11-21 21:32:18 -08:00
Jonathan Wei dc6178d1f2 Upgrade Calcite to 1.21 (#8566)
* Upgrade Calcite to 1.21

* Checkstyle, test fix'

* Exclude calcite yaml deps, update license.yaml

* Add method for exception chain handling

* Checkstyle

* PR comments, Add outer limit context flag

* Revert project settings change

* Update subquery test comment

* Checkstyle fix

* Fix test in sql compat mode

* Fix test

* Fix dependency analysis

* Address PR comments

* Checkstyle

* Adjust testSelectStarFromSelectSingleColumnWithLimitDescending
2019-11-20 21:22:55 -08:00
Jihoon Son ac6d703814 Support inputFormat and inputSource for sampler (#8901)
* Support inputFormat and inputSource for sampler

* Cleanup javadocs and names

* fix style

* fix timed shutoff input source reader

* fix timed shutoff input source reader again

* tidy up timed shutoff reader

* unused imports

* fix tc
2019-11-20 14:51:25 -08:00
Surekha d628bebbd7 Make supervisor API similar to submit task API (#8810)
* accept spec or dataSchema, tuningConfig, ioConfig while submitting task json

* fix test

* update docs

* lgtm warning

* Add original constructor back to IndexTask to minimize changes

* fix indentation in docs

* Allow spec to be specified in supervisor schema

* undo IndexTask spec changes

* update docs

* Add Nullable and deprecated annotations

* remove deprecated configs from SeekableStreamSupervisorSpec

* remove nullable annotation
2019-11-20 10:04:41 -08:00
Clint Wylie 3fcaa1a61b
fix sql compatible null handling config work with runtime.properties (#8876)
* fix sql compatible null handling config work with runtime.properties

* fix npe

* fix tests

* add friendly error

* comment, and friendlier still

* fix compile

* fix from merges
2019-11-20 03:55:29 -08:00
Chi Cao Minh 4ae6466ae2 HDFS input source (#8899)
* HDFS input source

Add support for using HDFS as an input source. In this version, commas
or globs are not supported in HDFS paths.

* Fix forbidden api

* Address review comments
2019-11-19 22:19:39 -08:00
Clint Wylie 074a45219d add google cloud storage InputSource for native batch (#8907)
* add google cloud storage InputSource for native batch

* rename

* checkstyle

* fix

* fix spelling

* review comments
2019-11-19 19:49:43 -08:00
Rye d0913475b7 sampler returns nulls in CSV (#8871)
* sampler returns nulls in CSV

* fixed kafka sampler test

* fix Kinesis test

* sql compatibility fix

* remove null to empty string conversion, use null

* fix sql compatibility
2019-11-19 13:59:44 -08:00
Gian Merlino c44452f0c1 Tidy up lifecycle, query, and ingestion logging. (#8889)
* Tidy up lifecycle, query, and ingestion logging.

The goal of this patch is to improve the clarity and usefulness of
Druid's logging for cluster operators. For more information, see
https://twitter.com/cowtowncoder/status/1195469299814555648.

Concretely, this patch does the following:

- Changes a lot of INFO logs to DEBUG, and DEBUG to TRACE, with the
  goal of reducing redundancy and improving clarity by avoiding
  showing rarely-useful log messages. This includes most "starting"
  and "stopping" messages, and most messages related to individual
  columns.
- Adds new log4j2 templates that show operators how to enabled DEBUG
  logging for certain important packages.
- Eliminate stack traces for query errors, unless log level is DEBUG
  or more. This is useful because query errors often indicate user
  error rather than system error, but dumping stack trace often gave
  operators the impression that there was a system failure.
- Adds task id to Appenderator, AppenderatorDriver thread names. In
  the default log4j2 configuration, this will put them in log lines
  as well. It's very useful if a user is using the Indexer, where
  multiple tasks run in the same JVM.
- More consistent terminology when it comes to "sequences" (sets of
  segments that are handed-off together by Kafka ingestion) and
  "offsets" (cursors in partitions). These terms had been confused in
  some log messages due to the fact that Kinesis calls offsets
  "sequence numbers".
- Replaces some ugly toString calls with either the JSONification or
  something more operator-accessible (like a URL or segment identifier,
  instead of JSON object representing the same).

* Adjustments.

* Adjust integration test.
2019-11-19 13:57:58 -08:00
Surekha cf6643eb9a add sequenceName and currentCheckPoint for backwards compatibility (#8864)
* add sequenceName and currentCheckPoint for backwards compatibility

* Add serde unit test in kafka

* fix checkstyle

* add hashcode

* update javadoc
2019-11-19 13:11:31 -08:00
Chi Cao Minh 8365bdf62a Address security vulnerabilities (#8878)
* Address security vulnerabilities

Security vulnerabilities addressed by upgrading 3rd party libs:

- Upgrade avro-ipc to 1.9.1
  - sonatype-2019-0115
- Upgrade caffeine to 2.8.0
  - sonatype-2019-0282
- Upgrade commons-beanutils to 1.9.4
  - CVE-2014-0114
- Upgrade commons-codec to 1.13
  - sonatype-2012-0050
- Upgrade commons-compress to 1.19
  - CVE-2019-12402
  - sonatype-2018-0293
- Upgrade hadoop-common to 2.8.5
  - CVE-2018-11767
- Upgrade hadoop-mapreduce-client-core to 2.8.5
  - CVE-2017-3166
- Upgrade hibernate-validator to 5.2.5
  - CVE-2017-7536
- Upgrade httpclient to 4.5.10
  - sonatype-2017-0359
- Upgrade icu4j to 55.1
  - CVE-2014-8147
- Upgrade jackson-databind to 2.6.7.3:
  - CVE-2017-7525
- Upgrade jetty-http to 9.4.12:
  - CVE-2017-7657
  - CVE-2017-7658
  - CVE-2017-7656
  - CVE-2018-12545
- Upgrade log4j-core to 2.8.2
  - CVE-2017-5645:
- Upgrade netty to 3.10.6
  - CVE-2015-2156
- Upgrade netty-common to 4.1.42
  - CVE-2019-9518
- Upgrade netty-codec-http to 4.1.42
  - CVE-2019-16869
- Upgrade nimbus-jose-jwt to 4.41.1
  - CVE-2017-12972
  - CVE-2017-12974
- Upgrade plexus-utils to 3.0.24
  - CVE-2017-1000487
  - sonatype-2015-0173
  - sonatype-2016-0398
- Upgrade postgresql to 42.2.8
  - CVE-2018-10936

Note that if users are using JDBC lookups with postgres, they may need
to update the JDBC jar used by the lookup extension.

* Fix license for postgresql
2019-11-19 09:14:33 -08:00
Atul Mohan 8515a03c6b Modify batch index task naming to accomodate simultaneous tasks (#8612)
* Change hadoop task naming

* Remove unused

* Add timestamp

* Fix build
2019-11-18 15:07:16 -08:00
Chi Cao Minh d60978343a Improve missing JDBC driver error for lookups (#8872)
If the JDBC drivers are missing from the lookup extensions, throw an
exception that directs the user how to resolve the issue. This change is
a follow up to #8825.
2019-11-18 11:42:38 -08:00
Rye ea8e4066f6 Use earliest offset on kafka newly discovered partitions (#8748)
* Use earliest offset on kafka newly discovered partitions

* resolve conflicts

* remove redundant check cases

* simplified unit tests

* change test case

* rewrite comments

* add regression test

* add junit ignore annotation

* minor modifications

* indent

* override testableKafkaSupervisor and KafkaRecordSupplier to make the test runable

* modified test constructor of kafkaRecordSupplier

* simplify

* delegated constructor
2019-11-18 11:05:31 -08:00
Jihoon Son 1611792855
Add InputSource and InputFormat interfaces (#8823)
* Add InputSource and InputFormat interfaces

* revert orc dependency

* fix dimension exclusions and failing unit tests

* fix tests

* fix test

* fix test

* fix firehose and inputSource for parallel indexing task

* fix tc

* fix tc: remove unused method

* Formattable

* add needsFormat(); renamed to ObjectSource; pass metricsName for reader

* address comments

* fix closing resource

* fix checkstyle

* fix tests

* remove verify from csv

* Revert "remove verify from csv"

This reverts commit 1ea7758489.

* address comments

* fix import order and javadoc

* flatMap

* sampleLine

* Add IntermediateRowParsingReader

* Address comments

* move csv reader test

* remove test for verify

* adjust comments

* Fix InputEntityIteratingReader

* rename source -> entity

* address comments
2019-11-15 09:22:09 -08:00
Jonathan Wei 75ea0d592a Add more datasketches doubles sketch SQL functions (#8843)
* Add more datasketches doubles sketch SQL postaggs

* style and lgtm
2019-11-08 18:05:06 -08:00
Gian Merlino c204d68376 Fixes, adjustments to numeric null handling and string first/last aggregators. (#8834)
There is a class of bugs due to the fact that BaseObjectColumnValueSelector
has both "getObject" and "isNull" methods, but in most selector implementations
and most call sites, it is clear that the intent of "isNull" is only to apply
to the primitive getters, not the object getter. This makes sense, because the
purpose of isNull is to enable detection of nulls in otherwise-primitive columns.
Imagine a string column with a numeric selector built on top of it. You would
want it to return isNull = true, so numeric aggregators don't treat it as
all zeroes.

Sometimes this design leads people to accidentally guard non-primitive get
methods with "selector.isNull" checks, which is improper.

This patch has three goals:

1) Fix null-handling bugs that already exist in this class.
2) Make interface and doc changes that reduce the probability of future bugs.
3) Fix other, unrelated bugs I noticed in the stringFirst and stringLast
   aggregators while fixing null-handling bugs. I thought about splitting this
   into its own patch, but it ended up being tough to split from the
   null-handling fixes.

For (1) the fixes are,

- Fix StringFirst and StringLastAggregatorFactory to stop guarding getObject
  calls on isNull, by no longer extending NullableAggregatorFactory. Now uses
  -1 as a sigil value for null, to differentiate nulls and empty strings.
- Fix ExpressionFilter to stop guarding getObject calls on isNull. Also, use
  eval.asBoolean() to avoid calling getLong on the selector after already
  calling getObject.
- Fix ObjectBloomFilterAggregator to stop guarding DimensionSelector calls
  on isNull. Also, refactored slightly to avoid the overhead of calling
  getObject followed by another getter (see BloomFilterAggregatorFactory for
  part of this).

For (2) the main changes are,

- Remove the "isNull" method from BaseObjectColumnValueSelector.
- Clarify "isNull" doc on BaseNullableColumnValueSelector.
- Rename NullableAggregatorFactory -> NullbleNumericAggregatorFactory to emphasize
  that it only works on aggregators that take numbers as input.
- Similar naming changes to the Aggregator, BufferAggregator, and AggregateCombiner.
- Similar naming changes to helper methods for groupBy, ValueMatchers, etc.

For (3) the other fixes for StringFirst and StringLastAggregatorFactory are,

- Fixed buffer overrun in the buffer aggregators when some characters in the string
  code into more than one byte (the old code used "substring" to apply a byte limit,
  which is bad). I did this by introducing a new StringUtils.toUtf8WithLimit method.
- Fixed weird IncrementalIndex logic that led to reading nulls for the timestamp.
- Adjusted weird StringFirst/Last logic that worked around the weird IncrementalIndex
  behavior.
- Refactored to share code between the four aggregators.
- Improved test coverage.
- Made the base stringFirst, stringLast aggregators adaptive, and streamlined the
  xFold versions into aliases. The adaptiveness is similar to how other aggregators
  like hyperUnique work.
2019-11-07 17:46:59 -08:00
Roman Leventov 5c0fc0a13a Fix ambiguity about IndexerSQLMetadataStorageCoordinator.getUsedSegmentsForInterval() returning only non-overshadowed or all used segments (#8564)
* IndexerSQLMetadataStorageCoordinator.getTimelineForIntervalsWithHandle() don't fetch abutting intervals; simplify getUsedSegmentsForIntervals()

* Add VersionedIntervalTimeline.findNonOvershadowedObjectsInInterval() method; Propagate the decision about whether only visible segmetns or visible and overshadowed segments should be returned from IndexerMetadataStorageCoordinator's methods to the user logic; Rename SegmentListUsedAction to RetrieveUsedSegmentsAction, SegmetnListUnusedAction to RetrieveUnusedSegmentsAction, and UsedSegmentLister to UsedSegmentsRetriever

* Fix tests

* More fixes

* Add javadoc notes about returning Collection instead of Set. Add JacksonUtils.readValue() to reduce boilerplate code

* Fix KinesisIndexTaskTest, factor out common parts from KinesisIndexTaskTest and KafkaIndexTaskTest into SeekableStreamIndexTaskTestBase

* More test fixes

* More test fixes

* Add a comment to VersionedIntervalTimelineTestBase

* Fix tests

* Set DataSegment.size(0) in more tests

* Specify DataSegment.size(0) in more places in tests

* Fix more tests

* Fix DruidSchemaTest

* Set DataSegment's size in more tests and benchmarks

* Fix HdfsDataSegmentPusherTest

* Doc changes addressing comments

* Extended doc for visibility

* Typo

* Typo 2

* Address comment
2019-11-06 11:07:04 -08:00
Giuseppe Martino 9c171e2b1f Message rejection absolute date (#8656)
* Add option lateMessageRejectionStartDate

* Use option lateMessageRejectionStartDate

* Fix tests

* Add lateMessageRejectionStartDate to kafka indexing service

* Update tests kafka indexing service

* Fix tests for KafkaSupervisorTest

* Add lateMessageRejectionStartDate to KinesisSupervisorIOConfig

* Fix var name

* Update documentation

* Add check lateMessageRejectionStartDateTime and lateMessageRejectionPeriod, fails if both were specified.
2019-10-31 15:13:02 -07:00
yuanli bca649e492 Case sensitive comparison of nonbinary string in MySQL metadata storage (#8758) 2019-10-30 20:48:08 -07:00
Clint Wylie 3ff5e02237 remove select query (#8739)
* remove select query

* thanks teamcity

* oops

* oops

* add back a SelectQuery class that throws RuntimeExceptions linking to docs

* adjust text

* update docs per review

* deprecated
2019-10-30 19:29:56 -07:00
karthikbhat13 b8ceee4eee Removed 'if' condition. (#8768) 2019-10-28 13:40:03 -07:00
Gian Merlino b65d2ac648 Add HDFS firehose (#8754)
* Add HDFS firehose.

* Tests, support for lists of paths.

* Fixups.

* Update list of firehoses.

* Wildcards is a word.
2019-10-28 08:07:38 -07:00
Jihoon Son 2518478b20 Remove deprecated parameter for Checkpoint request (#8707)
* Remove deprecated parameter for Checkpoint request

* fix wrong doc
2019-10-23 16:51:16 -07:00
Surekha 98f59ddd7e Add `sys.supervisors` table to system tables (#8547)
* Add supervisors table to SystemSchema

* Add docs

* fix checkstyle

* fix test

* fix CI

* Add comments

* Fix javadoc teamcity error

* comments

* fix links in docs

* fix links

* rename fullStatus query param to system and remove it from docs
2019-10-18 15:16:42 -07:00
Jonathan Wei d88075237a
Add initial SQL support for non-expression sketch postaggs (#8487)
* Add initial SQL support for non-expression sketch postaggs

* Checkstyle, spotbugs

* checkstyle

* imports

* Update SQL docs

* Checkstyle

* Fix theta sketch operator docs

* PR comments

* Checkstyle fixes

* Add missing entries for HLL sketch module

* PR comments, add round param to HLL estimate operator, fix optional HLL param
2019-10-18 14:59:44 -07:00
Jihoon Son 30c15900be
Auto compaction based on parallel indexing (#8570)
* Auto compaction based on parallel indexing

* javadoc and doc

* typo

* update spell

* addressing comments

* address comments

* fix log

* fix build

* fix test

* increase default max input segment bytes per task

* fix test
2019-10-18 13:24:14 -07:00
Mohammad J. Khan 1ca859584f Issue 8678 Non-coordinator services are repeatedly logging JsonMappingException when using druid-basic-security extension with an authenticator that has no users setup (#8692) 2019-10-18 11:09:53 -07:00
Jonathan Wei 89ce6384f5
More Kinesis resharding adjustments (#8671)
* More Kinesis resharding adjustments

* Fix TC inspection

* Fix comment'

* Adjust comment, small refactor

* Make repartition transition time configurable

* Add spellcheck exclusion

* Spelling fix
2019-10-15 23:19:17 -07:00
Jihoon Son 4046c86d62
Stateful auto compaction (#8573)
* Stateful auto compaction

* javaodc

* add removed test back

* fix test

* adding indexSpec to compactionState

* fix build

* add lastCompactionState

* address comments

* extract CompactionState

* fix doc

* fix build and test

* Add a task context to store compaction state; add javadoc

* fix it test
2019-10-15 22:57:42 -07:00
Jonathan Wei 0c387c1d47 Fix Kinesis resharding issues (#8644)
* Fix Kinesis resharding issues

* PR comments

* Adjust metadata error message

* Remove unused method

* Use sha1 for shard id hashing

* Add metadata sanity check, add comment

* Only use shard ID hashing for group mapping

* Style fix

* Fix unused import

* update comment

* Fix teamcity inspection
2019-10-10 00:16:44 -07:00
Jonathan Wei 526f04c47c Fix missing jackson jars for hadoop ingestion (#8652)
* Fix missing jackson jars for hadoop ingestion

* PR comments

* pom ordering

* New approach

* Remove all jackson-core/mapper-asl exclusions from hdfs storage
2019-10-08 23:54:55 -07:00
Mohammad J. Khan 18758f5228 Support LDAP authentication/authorization (#6972)
* Support LDAP authentication/authorization

* fixed integration-tests

* fixed Travis CI build errors related to druid-security module

* fixed failing test

* fixed failing test header

* added comments, force build

* fixes for strict compilation spotbugs checks

* removed authenticator rolling credential update feature

* removed escalator rolling credential update feature

* fixed teamcity inspection deprecated API usage error

* fixed checkstyle execution error, removed unused import

* removed cached config as part of removing authenticator rolling credential update feature

* removed config bundle entity as part of removing authenticator rolling credential update feature

* refactored ldao configuration

* added support for SSLContext configuration and TLSCertificateChecker

* removed check to return authentication failure when user has no group assigned, will be checked and handled by the authorizer

* Separate out authorizer checks between metadata-backed store user and LDAP user/groups

* refactored BasicSecuritySSLSocketFactory usage to fix strict compilation spotbugs checks

* fixes build issue

* final review comments updates

* final review comments updates

* fixed LGTM and spellcheck alerts

* Fixed Avatica auth failure error message check

* Updated metadata credentials validator exception message string, replaced DB with metadata store
2019-10-08 17:08:27 -07:00
Fokko Driesprong a2363b6b61 Remove commons-httpclient (#8407) 2019-09-27 02:14:58 -07:00
elloooooo 7f2b6577ef get active task by datasource when supervisor discover tasks (#8450)
* get active task by datasource when supervisor discover tasks

* fix ut

* fix ut

* fix ut

* remove unnecessary condition check

* fix ut

* remove stream in hot loop
2019-09-26 16:15:24 -07:00
Rye f2a444321b Added live reports for Kafka and Native batch task (#8557)
* Added live reports for Kafka and Native batch task

* Removed unused local variables

* Added the missing unit test

* Refine unit test logic, add implementation for HttpRemoteTaskRunner

* checksytle fixes

* Update doc descriptions for updated API

* remove unnecessary files

* Fix spellcheck complaints

* More details for api descriptions
2019-09-23 21:08:36 -07:00
Benedict Jin c6f4f09557 Fix missing space in string literal and spurious Javadoc @param tags from LGTM (#8491)
* Fix missing space in string literal

* Fix spurious Javadoc @param tags
2019-09-16 14:37:47 +05:30
Kamal Gurala 61761bd0b1 kafka version update (#8525) 2019-09-12 18:56:47 -07:00
Chi Cao Minh 5f61374cb3 Fix dependency analyze warnings (#8230)
* Fix dependency analyze warnings

Update the maven dependency plugin to the latest version and fix all
warnings for unused declared and used undeclared dependencies in the
compile scope. Added new travis job to add the check to CI. Also fixed
some source code files to use the correct packages for their imports and
updated druid-forbidden-apis to prevent regressions.

* Address review comments

* Adjust scope for org.glassfish.jaxb:jaxb-runtime

* Fix dependencies for hdfs-storage

* Consolidate netty4 versions
2019-09-09 14:37:21 -07:00
Benedict Jin de18840412
Fix inconsistent equals and hashCode (#8381)
* Fix inconsistent equals and hashCode

* Patch comments

* Remove equals and hashCode from InsensitiveContainsSearchQuerySpec
2019-09-04 13:48:08 +08:00
Fokko Driesprong abd86467f8 Bump ORC library to 1.5.6 (#8405)
Changelog at:
https://orc.apache.org/docs/releases.html#current-release---156
2019-09-02 02:24:31 -07:00
Clint Wylie c73a489335
bump master version to 0.17.0-incubating-SNAPSHOT (#8421) 2019-08-28 01:58:36 -07:00
Himanshu 4d87a19547
Logging emitter to publish query and other metric events as valid json objects (#8359)
* LoggingEmitter: print event as json

* use DefaultRequestLogEventBuilderFactory in emitting request logger by default

* print context in query metric as json

* removed unused jsonMapper from DefaultQueryMetrics

* add comment

* remove change to DefaultRequestLogEventBuilderFactory.java
2019-08-27 15:00:23 -07:00
Jihoon Son e5ef5ddafa Fix the shuffle with TLS enabled for parallel indexing; add an integration test; improve unit tests (#8350)
* Fix shuffle with tls enabled; add an integration test; improve unit tests

* remove debug log

* fix tests

* unused import

* add javadoc

* rename to getContent
2019-08-26 19:27:41 -07:00
Xavier Léauté 5c7803fe6b fix powermock classloader issues with Java 9 and above 2019-08-24 18:20:52 -04:00
SandishKumarHN 33f0753a70 Add Checkstyle for constant name static final (#8060)
* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* check ctyle for constant field name

* merging with upstream

* review-1

* unknow changes

* unknow changes

* review-2

* merging with master

* review-2 1 changes

* review changes-2 2

* bug fix
2019-08-23 13:13:54 +03:00
Atul Mohan 661976f266 Reset sketch combiner in AggregatorCombiner (#8368)
* Reset union in AggregateCombiner

* Use newer sketch objects for test

* Add empty sketch objects
2019-08-23 00:22:40 -07:00
Jihoon Son fba92ae469 Fix to always use end sequenceNumber for reset (#8305)
* Fix to always use end sequenceNumber for reset

* fix checkstyle

* fix style and add log
2019-08-22 16:51:25 -05:00
Aaron Bossert a4d1219184 Removed hard-coded Kafka Deserializer in Web-UI Kafka data import such that users can supply a custom deserializer in the UI as well as in hand-built ingestion specs. (#8364) 2019-08-21 18:03:57 -07:00
Jihoon Son 22d6384d36
Fix unrealistic test variables in KafkaSupervisorTest and tidy up unused variable in checkpointing process (#7319)
* Fix unrealistic test arguments in KafkaSupervisorTest

* remove currentCheckpoint from checkpoint action

* rename variable
2019-08-21 10:58:22 -07:00
Benedict Jin 781873ba53 Fix resource leak (#8337)
* Fix resource leak

* Patch comments
2019-08-20 12:55:41 +03:00