MAPREDUCE-2243. Close streams propely in a finally-block to avoid leakage in CompletedJobStatusStore, TaskLog, EventWriter and TotalOrderPartitioner. Contributed by Devaraj K
git-svn-id: https://svn.apache.org/repos/asf/hadoop/common/trunk@1152787 13f79535-47bb-0310-9956-ffa450edef68
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d68e38b78d
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@ -362,6 +362,10 @@ Trunk (unreleased changes)
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MAPREDUCE-2463. Job history files are not moved to done folder when job
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MAPREDUCE-2463. Job history files are not moved to done folder when job
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history location is hdfs. (Devaraj K via szetszwo)
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history location is hdfs. (Devaraj K via szetszwo)
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MAPREDUCE-2243. Close streams propely in a finally-block to avoid leakage
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in CompletedJobStatusStore, TaskLog, EventWriter and TotalOrderPartitioner.
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(Devaraj K via szetszwo)
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Release 0.22.0 - Unreleased
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Release 0.22.0 - Unreleased
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INCOMPATIBLE CHANGES
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INCOMPATIBLE CHANGES
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@ -32,6 +32,7 @@ import org.apache.hadoop.security.UserGroupInformation;
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import org.apache.hadoop.security.AccessControlException;
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import org.apache.hadoop.security.AccessControlException;
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import org.apache.hadoop.fs.permission.FsAction;
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import org.apache.hadoop.fs.permission.FsAction;
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import org.apache.hadoop.fs.permission.FsPermission;
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import org.apache.hadoop.fs.permission.FsPermission;
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import org.apache.hadoop.io.IOUtils;
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import org.apache.hadoop.util.DiskChecker.DiskErrorException;
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import org.apache.hadoop.util.DiskChecker.DiskErrorException;
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/**
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/**
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@ -172,8 +173,9 @@ class CompletedJobStatusStore implements Runnable {
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if (active && retainTime > 0) {
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if (active && retainTime > 0) {
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JobID jobId = job.getStatus().getJobID();
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JobID jobId = job.getStatus().getJobID();
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Path jobStatusFile = getInfoFilePath(jobId);
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Path jobStatusFile = getInfoFilePath(jobId);
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FSDataOutputStream dataOut = null;
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try {
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try {
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FSDataOutputStream dataOut = fs.create(jobStatusFile);
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dataOut = fs.create(jobStatusFile);
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job.getStatus().write(dataOut);
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job.getStatus().write(dataOut);
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@ -189,6 +191,7 @@ class CompletedJobStatusStore implements Runnable {
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}
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}
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dataOut.close();
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dataOut.close();
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dataOut = null; // set dataOut to null explicitly so that close in finally will not be executed again.
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} catch (IOException ex) {
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} catch (IOException ex) {
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LOG.warn("Could not store [" + jobId + "] job info : " +
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LOG.warn("Could not store [" + jobId + "] job info : " +
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ex.getMessage(), ex);
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ex.getMessage(), ex);
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@ -198,6 +201,8 @@ class CompletedJobStatusStore implements Runnable {
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catch (IOException ex1) {
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catch (IOException ex1) {
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//ignore
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//ignore
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}
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}
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} finally {
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IOUtils.cleanup(LOG, dataOut);
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}
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}
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}
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}
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}
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}
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@ -41,6 +41,7 @@ import org.apache.hadoop.fs.LocalFileSystem;
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import org.apache.hadoop.fs.FileStatus;
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import org.apache.hadoop.fs.FileStatus;
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import org.apache.hadoop.fs.FileUtil;
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import org.apache.hadoop.fs.FileUtil;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.io.IOUtils;
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import org.apache.hadoop.io.SecureIOUtils;
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import org.apache.hadoop.io.SecureIOUtils;
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import org.apache.hadoop.mapreduce.JobID;
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import org.apache.hadoop.mapreduce.JobID;
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import org.apache.hadoop.mapreduce.util.ProcessTree;
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import org.apache.hadoop.mapreduce.util.ProcessTree;
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@ -111,15 +112,19 @@ public class TaskLog {
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//stderr:<start-offset in the stderr file> <length>
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//stderr:<start-offset in the stderr file> <length>
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//syslog:<start-offset in the syslog file> <length>
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//syslog:<start-offset in the syslog file> <length>
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LogFileDetail l = new LogFileDetail();
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LogFileDetail l = new LogFileDetail();
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String str = fis.readLine();
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String str = null;
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if (str == null) { //the file doesn't have anything
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try {
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throw new IOException ("Index file for the log of " + taskid+" doesn't exist.");
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str = fis.readLine();
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if (str == null) { // the file doesn't have anything
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throw new IOException("Index file for the log of " + taskid
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+ " doesn't exist.");
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}
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}
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l.location = str.substring(str.indexOf(LogFileDetail.LOCATION)+
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l.location = str.substring(str.indexOf(LogFileDetail.LOCATION)
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LogFileDetail.LOCATION.length());
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+ LogFileDetail.LOCATION.length());
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//special cases are the debugout and profile.out files. They are guaranteed
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// special cases are the debugout and profile.out files. They are
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//to be associated with each task attempt since jvm reuse is disabled
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// guaranteed
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//when profiling/debugging is enabled
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// to be associated with each task attempt since jvm reuse is disabled
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// when profiling/debugging is enabled
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if (filter.equals(LogName.DEBUGOUT) || filter.equals(LogName.PROFILE)) {
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if (filter.equals(LogName.DEBUGOUT) || filter.equals(LogName.PROFILE)) {
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l.length = new File(l.location, filter.toString()).length();
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l.length = new File(l.location, filter.toString()).length();
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l.start = 0;
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l.start = 0;
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@ -128,9 +133,9 @@ public class TaskLog {
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}
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}
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str = fis.readLine();
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str = fis.readLine();
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while (str != null) {
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while (str != null) {
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//look for the exact line containing the logname
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// look for the exact line containing the logname
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if (str.contains(filter.toString())) {
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if (str.contains(filter.toString())) {
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str = str.substring(filter.toString().length()+1);
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str = str.substring(filter.toString().length() + 1);
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String[] startAndLen = str.split(" ");
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String[] startAndLen = str.split(" ");
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l.start = Long.parseLong(startAndLen[0]);
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l.start = Long.parseLong(startAndLen[0]);
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l.length = Long.parseLong(startAndLen[1]);
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l.length = Long.parseLong(startAndLen[1]);
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@ -139,6 +144,10 @@ public class TaskLog {
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str = fis.readLine();
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str = fis.readLine();
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}
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}
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fis.close();
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fis.close();
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fis = null;
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} finally {
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IOUtils.cleanup(LOG, fis);
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}
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return l;
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return l;
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}
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}
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@ -190,6 +199,7 @@ public class TaskLog {
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//STDOUT: <start-offset in the stdout file> <length>
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//STDOUT: <start-offset in the stdout file> <length>
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//STDERR: <start-offset in the stderr file> <length>
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//STDERR: <start-offset in the stderr file> <length>
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//SYSLOG: <start-offset in the syslog file> <length>
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//SYSLOG: <start-offset in the syslog file> <length>
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try{
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dos.writeBytes(LogFileDetail.LOCATION + logLocation + "\n"
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dos.writeBytes(LogFileDetail.LOCATION + logLocation + "\n"
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+ LogName.STDOUT.toString() + ":");
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+ LogName.STDOUT.toString() + ":");
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dos.writeBytes(Long.toString(prevOutLength) + " ");
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dos.writeBytes(Long.toString(prevOutLength) + " ");
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@ -205,6 +215,10 @@ public class TaskLog {
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.toString()).length() - prevLogLength)
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.toString()).length() - prevLogLength)
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+ "\n");
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+ "\n");
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dos.close();
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dos.close();
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dos = null;
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} finally {
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IOUtils.cleanup(LOG, dos);
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}
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File indexFile = getIndexFile(currentTaskid, isCleanup);
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File indexFile = getIndexFile(currentTaskid, isCleanup);
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Path indexFilePath = new Path(indexFile.getAbsolutePath());
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Path indexFilePath = new Path(indexFile.getAbsolutePath());
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@ -22,6 +22,7 @@ import java.io.IOException;
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import java.util.Iterator;
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import java.util.Iterator;
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import org.apache.hadoop.fs.FSDataOutputStream;
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import org.apache.hadoop.fs.FSDataOutputStream;
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import org.apache.hadoop.io.IOUtils;
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import org.apache.hadoop.mapreduce.Counter;
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import org.apache.hadoop.mapreduce.Counter;
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import org.apache.hadoop.mapreduce.CounterGroup;
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import org.apache.hadoop.mapreduce.CounterGroup;
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import org.apache.hadoop.mapreduce.Counters;
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import org.apache.hadoop.mapreduce.Counters;
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@ -33,6 +34,8 @@ import org.apache.avro.io.DatumWriter;
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import org.apache.avro.specific.SpecificDatumWriter;
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import org.apache.avro.specific.SpecificDatumWriter;
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import org.apache.avro.generic.GenericData;
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import org.apache.avro.generic.GenericData;
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import org.apache.avro.util.Utf8;
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import org.apache.avro.util.Utf8;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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/**
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/**
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* Event Writer is an utility class used to write events to the underlying
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* Event Writer is an utility class used to write events to the underlying
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@ -47,6 +50,7 @@ class EventWriter {
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private DatumWriter<Event> writer =
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private DatumWriter<Event> writer =
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new SpecificDatumWriter<Event>(Event.class);
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new SpecificDatumWriter<Event>(Event.class);
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private Encoder encoder;
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private Encoder encoder;
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private static final Log LOG = LogFactory.getLog(EventWriter.class);
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EventWriter(FSDataOutputStream out) throws IOException {
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EventWriter(FSDataOutputStream out) throws IOException {
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this.out = out;
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this.out = out;
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@ -72,8 +76,13 @@ class EventWriter {
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}
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}
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void close() throws IOException {
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void close() throws IOException {
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try {
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encoder.flush();
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encoder.flush();
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out.close();
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out.close();
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out = null;
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} finally {
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IOUtils.cleanup(LOG, out);
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}
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}
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}
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private static final Schema GROUPS =
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private static final Schema GROUPS =
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@ -23,6 +23,8 @@ import java.lang.reflect.Array;
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import java.util.ArrayList;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.Arrays;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.classification.InterfaceAudience;
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import org.apache.hadoop.classification.InterfaceAudience;
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import org.apache.hadoop.classification.InterfaceStability;
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import org.apache.hadoop.classification.InterfaceStability;
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import org.apache.hadoop.conf.Configurable;
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import org.apache.hadoop.conf.Configurable;
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@ -30,6 +32,7 @@ import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.io.BinaryComparable;
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import org.apache.hadoop.io.BinaryComparable;
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import org.apache.hadoop.io.IOUtils;
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import org.apache.hadoop.io.NullWritable;
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import org.apache.hadoop.io.NullWritable;
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import org.apache.hadoop.io.SequenceFile;
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import org.apache.hadoop.io.SequenceFile;
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import org.apache.hadoop.io.RawComparator;
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import org.apache.hadoop.io.RawComparator;
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public static final String NATURAL_ORDER =
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public static final String NATURAL_ORDER =
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"mapreduce.totalorderpartitioner.naturalorder";
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"mapreduce.totalorderpartitioner.naturalorder";
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Configuration conf;
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Configuration conf;
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private static final Log LOG = LogFactory.getLog(TotalOrderPartitioner.class);
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public TotalOrderPartitioner() { }
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public TotalOrderPartitioner() { }
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@ -298,11 +302,16 @@ public class TotalOrderPartitioner<K extends WritableComparable<?>,V>
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ArrayList<K> parts = new ArrayList<K>();
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ArrayList<K> parts = new ArrayList<K>();
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K key = ReflectionUtils.newInstance(keyClass, conf);
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K key = ReflectionUtils.newInstance(keyClass, conf);
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NullWritable value = NullWritable.get();
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NullWritable value = NullWritable.get();
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try {
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while (reader.next(key, value)) {
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while (reader.next(key, value)) {
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parts.add(key);
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parts.add(key);
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key = ReflectionUtils.newInstance(keyClass, conf);
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key = ReflectionUtils.newInstance(keyClass, conf);
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}
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}
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reader.close();
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reader.close();
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reader = null;
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} finally {
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IOUtils.cleanup(LOG, reader);
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}
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return parts.toArray((K[])Array.newInstance(keyClass, parts.size()));
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return parts.toArray((K[])Array.newInstance(keyClass, parts.size()));
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}
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}
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