HDFS-3110. Use directRead API to reduce the number of buffer copies in libhdfs. Contributed by Henry Robinson.
git-svn-id: https://svn.apache.org/repos/asf/hadoop/common/trunk@1310185 13f79535-47bb-0310-9956-ffa450edef68
This commit is contained in:
Todd Lipcon
parent
d483b6f3fc
commit
d166bd184d
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@ -70,6 +70,9 @@ Trunk (unreleased changes)
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HDFS-2834. Add a ByteBuffer-based read API to DFSInputStream.
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(Henry Robinson via todd)
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HDFS-3110. Use directRead API to reduce the number of buffer copies in
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libhdfs (Henry Robinson via todd)
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BUG FIXES
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HDFS-2299. TestOfflineEditsViewer is failing on trunk. (Uma Maheswara Rao G
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@ -123,6 +123,11 @@ static int errnoFromException(jthrowable exc, JNIEnv *env,
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goto done;
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}
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if (!strcmp(excClass, "java.lang.UnsupportedOperationException")) {
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errnum = ENOTSUP;
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goto done;
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}
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if (!strcmp(excClass, "org.apache.hadoop.security."
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"AccessControlException")) {
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errnum = EACCES;
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@ -614,8 +619,29 @@ hdfsFile hdfsOpenFile(hdfsFS fs, const char* path, int flags,
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} else {
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file->file = (*env)->NewGlobalRef(env, jVal.l);
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file->type = (((flags & O_WRONLY) == 0) ? INPUT : OUTPUT);
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file->flags = 0;
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destroyLocalReference(env, jVal.l);
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if ((flags & O_WRONLY) == 0) {
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// Try a test read to see if we can do direct reads
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errno = 0;
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char buf;
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if (readDirect(fs, file, &buf, 0) == 0) {
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// Success - 0-byte read should return 0
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file->flags |= HDFS_FILE_SUPPORTS_DIRECT_READ;
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} else {
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if (errno != ENOTSUP) {
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// Unexpected error. Clear it, don't set the direct flag.
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fprintf(stderr,
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"WARN: Unexpected error %d when testing "
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"for direct read compatibility\n", errno);
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errno = 0;
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goto done;
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}
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}
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errno = 0;
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}
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}
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done:
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@ -706,10 +732,57 @@ int hdfsExists(hdfsFS fs, const char *path)
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return jVal.z ? 0 : -1;
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}
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// Checks input file for readiness for reading.
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static int readPrepare(JNIEnv* env, hdfsFS fs, hdfsFile f,
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jobject* jInputStream)
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{
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*jInputStream = (jobject)(f ? f->file : NULL);
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//Sanity check
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if (!f || f->type == UNINITIALIZED) {
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errno = EBADF;
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return -1;
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}
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//Error checking... make sure that this file is 'readable'
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if (f->type != INPUT) {
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fprintf(stderr, "Cannot read from a non-InputStream object!\n");
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errno = EINVAL;
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return -1;
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}
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return 0;
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}
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// Common error-handling code between read paths.
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static int handleReadResult(int success, jvalue jVal, jthrowable jExc,
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JNIEnv* env)
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{
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int noReadBytes;
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if (success != 0) {
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if ((*env)->ExceptionCheck(env)) {
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errno = errnoFromException(jExc, env, "org.apache.hadoop.fs."
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"FSDataInputStream::read");
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}
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noReadBytes = -1;
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} else {
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noReadBytes = jVal.i;
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if (noReadBytes < 0) {
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// -1 from Java is EOF, which is 0 here
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noReadBytes = 0;
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}
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errno = 0;
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}
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return noReadBytes;
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}
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tSize hdfsRead(hdfsFS fs, hdfsFile f, void* buffer, tSize length)
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{
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if (f->flags & HDFS_FILE_SUPPORTS_DIRECT_READ) {
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return readDirect(fs, f, buffer, length);
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}
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// JAVA EQUIVALENT:
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// byte [] bR = new byte[length];
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// fis.read(bR);
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@ -722,46 +795,26 @@ tSize hdfsRead(hdfsFS fs, hdfsFile f, void* buffer, tSize length)
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}
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//Parameters
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jobject jInputStream = (jobject)(f ? f->file : NULL);
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jobject jInputStream;
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if (readPrepare(env, fs, f, &jInputStream) == -1) {
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return -1;
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}
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jbyteArray jbRarray;
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jint noReadBytes = 0;
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jvalue jVal;
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jthrowable jExc = NULL;
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//Sanity check
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if (!f || f->type == UNINITIALIZED) {
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errno = EBADF;
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return -1;
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}
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//Error checking... make sure that this file is 'readable'
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if (f->type != INPUT) {
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fprintf(stderr, "Cannot read from a non-InputStream object!\n");
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errno = EINVAL;
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return -1;
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}
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//Read the requisite bytes
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jbRarray = (*env)->NewByteArray(env, length);
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if (invokeMethod(env, &jVal, &jExc, INSTANCE, jInputStream, HADOOP_ISTRM,
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"read", "([B)I", jbRarray) != 0) {
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errno = errnoFromException(jExc, env, "org.apache.hadoop.fs."
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"FSDataInputStream::read");
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noReadBytes = -1;
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}
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else {
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noReadBytes = jVal.i;
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if (noReadBytes > 0) {
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(*env)->GetByteArrayRegion(env, jbRarray, 0, noReadBytes, buffer);
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} else {
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//This is a valid case: there aren't any bytes left to read!
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if (noReadBytes == 0 || noReadBytes < -1) {
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fprintf(stderr, "WARN: FSDataInputStream.read returned invalid return code - libhdfs returning EOF, i.e., 0: %d\n", noReadBytes);
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}
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noReadBytes = 0;
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}
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errno = 0;
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int success = invokeMethod(env, &jVal, &jExc, INSTANCE, jInputStream, HADOOP_ISTRM,
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"read", "([B)I", jbRarray);
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noReadBytes = handleReadResult(success, jVal, jExc, env);;
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if (noReadBytes > 0) {
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(*env)->GetByteArrayRegion(env, jbRarray, 0, noReadBytes, buffer);
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}
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destroyLocalReference(env, jbRarray);
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@ -769,6 +822,52 @@ tSize hdfsRead(hdfsFS fs, hdfsFile f, void* buffer, tSize length)
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return noReadBytes;
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}
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// Reads using the read(ByteBuffer) API, which does fewer copies
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tSize readDirect(hdfsFS fs, hdfsFile f, void* buffer, tSize length)
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{
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// JAVA EQUIVALENT:
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// ByteBuffer bbuffer = ByteBuffer.allocateDirect(length) // wraps C buffer
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// fis.read(bbuffer);
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//Get the JNIEnv* corresponding to current thread
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JNIEnv* env = getJNIEnv();
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if (env == NULL) {
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errno = EINTERNAL;
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return -1;
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}
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jobject jInputStream;
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if (readPrepare(env, fs, f, &jInputStream) == -1) {
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return -1;
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}
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jint noReadBytes = 0;
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jvalue jVal;
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jthrowable jExc = NULL;
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//Read the requisite bytes
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jobject bb = (*env)->NewDirectByteBuffer(env, buffer, length);
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if (bb == NULL) {
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fprintf(stderr, "Could not allocate ByteBuffer");
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if ((*env)->ExceptionCheck(env)) {
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errno = errnoFromException(NULL, env, "JNIEnv::NewDirectByteBuffer");
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} else {
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errno = ENOMEM; // Best guess if there's no exception waiting
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}
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return -1;
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}
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int success = invokeMethod(env, &jVal, &jExc, INSTANCE, jInputStream,
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HADOOP_ISTRM, "read", "(Ljava/nio/ByteBuffer;)I",
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bb);
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noReadBytes = handleReadResult(success, jVal, jExc, env);
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destroyLocalReference(env, bb);
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return noReadBytes;
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}
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tSize hdfsPread(hdfsFS fs, hdfsFile f, tOffset position,
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@ -81,12 +81,16 @@ extern "C" {
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};
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// Bit fields for hdfsFile_internal flags
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#define HDFS_FILE_SUPPORTS_DIRECT_READ (1<<0)
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/**
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* The 'file-handle' to a file in hdfs.
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*/
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struct hdfsFile_internal {
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void* file;
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enum hdfsStreamType type;
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uint32_t flags;
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};
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typedef struct hdfsFile_internal* hdfsFile;
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@ -203,7 +207,6 @@ extern "C" {
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*/
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tSize hdfsRead(hdfsFS fs, hdfsFile file, void* buffer, tSize length);
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/**
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* hdfsPread - Positional read of data from an open file.
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* @param fs The configured filesystem handle.
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@ -18,6 +18,8 @@
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#include "hdfs.h"
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tSize readDirect(hdfsFS fs, hdfsFile f, void* buffer, tSize length);
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void permission_disp(short permissions, char *rtr) {
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rtr[9] = '\0';
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int i;
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@ -51,7 +53,6 @@ void permission_disp(short permissions, char *rtr) {
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}
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int main(int argc, char **argv) {
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hdfsFS fs = hdfsConnectNewInstance("default", 0);
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if(!fs) {
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fprintf(stderr, "Oops! Failed to connect to hdfs!\n");
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@ -64,20 +65,25 @@ int main(int argc, char **argv) {
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exit(-1);
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}
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const char* writePath = "/tmp/testfile.txt";
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const char* writePath = "/tmp/testfile.txt";
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const char* fileContents = "Hello, World!";
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{
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//Write tests
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hdfsFile writeFile = hdfsOpenFile(fs, writePath, O_WRONLY|O_CREAT, 0, 0, 0);
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if(!writeFile) {
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fprintf(stderr, "Failed to open %s for writing!\n", writePath);
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exit(-1);
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}
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fprintf(stderr, "Opened %s for writing successfully...\n", writePath);
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char* buffer = "Hello, World!";
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tSize num_written_bytes = hdfsWrite(fs, writeFile, (void*)buffer, strlen(buffer)+1);
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tSize num_written_bytes =
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hdfsWrite(fs, writeFile, (void*)fileContents, strlen(fileContents)+1);
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if (num_written_bytes != strlen(fileContents) + 1) {
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fprintf(stderr, "Failed to write correct number of bytes - expected %d, got %d\n",
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(int)(strlen(fileContents) + 1), (int)num_written_bytes);
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exit(-1);
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}
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fprintf(stderr, "Wrote %d bytes\n", num_written_bytes);
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tOffset currentPos = -1;
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@ -138,18 +144,86 @@ int main(int argc, char **argv) {
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}
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fprintf(stderr, "Current position: %ld\n", currentPos);
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if ((readFile->flags & HDFS_FILE_SUPPORTS_DIRECT_READ) == 0) {
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fprintf(stderr, "Direct read support incorrectly not detected "
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"for HDFS filesystem\n");
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exit(-1);
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}
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fprintf(stderr, "Direct read support detected for HDFS\n");
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// Clear flags so that we really go through slow read path
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readFile->flags &= ~HDFS_FILE_SUPPORTS_DIRECT_READ;
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static char buffer[32];
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tSize num_read_bytes = hdfsRead(fs, readFile, (void*)buffer,
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sizeof(buffer));
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fprintf(stderr, "Read following %d bytes:\n%s\n",
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num_read_bytes, buffer);
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memset(buffer, 0, strlen(fileContents + 1));
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num_read_bytes = hdfsPread(fs, readFile, 0, (void*)buffer,
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sizeof(buffer));
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fprintf(stderr, "Read following %d bytes:\n%s\n",
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num_read_bytes, buffer);
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if (hdfsSeek(fs, readFile, 0L)) {
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fprintf(stderr,
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"Failed to seek to file start for direct read test!\n");
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exit(-1);
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}
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readFile->flags |= HDFS_FILE_SUPPORTS_DIRECT_READ;
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memset(buffer, 0, strlen(fileContents + 1));
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num_read_bytes = hdfsRead(fs, readFile, (void*)buffer,
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sizeof(buffer));
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if (strncmp(fileContents, buffer, strlen(fileContents)) != 0) {
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fprintf(stderr, "Failed to read (direct). Expected %s but got %s (%d bytes)\n",
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fileContents, buffer, num_read_bytes);
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exit(-1);
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}
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fprintf(stderr, "Read (direct) following %d bytes:\n%s\n",
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num_read_bytes, buffer);
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hdfsCloseFile(fs, readFile);
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// Test correct behaviour for unsupported filesystems
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hdfsFile localFile = hdfsOpenFile(lfs, writePath, O_WRONLY|O_CREAT, 0, 0, 0);
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if(!localFile) {
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fprintf(stderr, "Failed to open %s for writing!\n", writePath);
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exit(-1);
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}
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tSize num_written_bytes = hdfsWrite(lfs, localFile,
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(void*)fileContents,
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strlen(fileContents) + 1);
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hdfsCloseFile(lfs, localFile);
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localFile = hdfsOpenFile(lfs, writePath, O_RDONLY, 0, 0, 0);
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if (localFile->flags & HDFS_FILE_SUPPORTS_DIRECT_READ) {
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fprintf(stderr, "Direct read support incorrectly detected for local "
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"filesystem\n");
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exit(-1);
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}
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memset(buffer, 0, strlen(fileContents + 1));
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int result = readDirect(lfs, localFile, (void*)buffer, sizeof(buffer));
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if (result != -1) {
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fprintf(stderr, "Expected error from local direct read not seen!\n");
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exit(-1);
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}
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if (errno != ENOTSUP) {
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fprintf(stderr, "Error code not correctly set to ENOTSUP, was %d!\n",
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errno);
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exit(-1);
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}
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fprintf(stderr, "Expected exception thrown for unsupported direct read\n");
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hdfsCloseFile(lfs, localFile);
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}
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int totalResult = 0;
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@ -446,4 +520,3 @@ int main(int argc, char **argv) {
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/**
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* vim: ts=4: sw=4: et:
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*/
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@ -17,126 +17,64 @@
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#
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#
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# Note: This script depends on 8 environment variables to function correctly:
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# a) CLASSPATH
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# b) HADOOP_PREFIX
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# c) HADOOP_CONF_DIR
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# d) HADOOP_LOG_DIR
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# e) LIBHDFS_BUILD_DIR
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# f) LIBHDFS_INSTALL_DIR
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# g) OS_NAME
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# h) CLOVER_JAR
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# i} HADOOP_VERSION
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# j) HADOOP_HDFS_HOME
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# All these are passed by build.xml.
|
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# Note: This script depends on 5 environment variables to function correctly:
|
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# a) HADOOP_HOME - must be set
|
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# b) HDFS_TEST_CONF_DIR - optional; the directory to read and write
|
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# core-site.xml to. Defaults to /tmp
|
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# c) LIBHDFS_BUILD_DIR - optional; the location of the hdfs_test
|
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# executable. Defaults to the parent directory.
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# d) OS_NAME - used to choose how to locate libjvm.so
|
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# e) CLOVER_JAR - optional; the location of the Clover code coverage tool's jar.
|
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#
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if [ "x$HADOOP_HOME" == "x" ]; then
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echo "HADOOP_HOME is unset!"
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exit 1
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fi
|
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|
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if [ "x$LIBHDFS_BUILD_DIR" == "x" ]; then
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LIBHDFS_BUILD_DIR=`pwd`/../
|
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fi
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if [ "x$HDFS_TEST_CONF_DIR" == "x" ]; then
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HDFS_TEST_CONF_DIR=/tmp
|
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fi
|
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# LIBHDFS_INSTALL_DIR is the directory containing libhdfs.so
|
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LIBHDFS_INSTALL_DIR=$HADOOP_HOME/lib/native/
|
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HDFS_TEST=hdfs_test
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HADOOP_LIB_DIR=$HADOOP_PREFIX/lib
|
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HADOOP_BIN_DIR=$HADOOP_PREFIX/bin
|
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|
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COMMON_BUILD_DIR=$HADOOP_PREFIX/build/ivy/lib/hadoop-hdfs/common
|
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COMMON_JAR=$COMMON_BUILD_DIR/hadoop-common-$HADOOP_VERSION.jar
|
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HDFS_TEST_JAR=`find $HADOOP_HOME/share/hadoop/hdfs/ \
|
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-name "hadoop-hdfs-*-tests.jar" | head -n 1`
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|
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cat > $HADOOP_CONF_DIR/core-site.xml <<EOF
|
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<?xml version="1.0"?>
|
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<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
|
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<configuration>
|
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<property>
|
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<name>hadoop.tmp.dir</name>
|
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<value>file:///$LIBHDFS_TEST_DIR</value>
|
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</property>
|
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<property>
|
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<name>fs.default.name</name>
|
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<value>hdfs://localhost:23000/</value>
|
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</property>
|
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</configuration>
|
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EOF
|
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|
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cat > $HADOOP_CONF_DIR/hdfs-site.xml <<EOF
|
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<?xml version="1.0"?>
|
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<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
|
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<configuration>
|
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<property>
|
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<name>dfs.replication</name>
|
||||
<value>1</value>
|
||||
</property>
|
||||
<property>
|
||||
<name>dfs.support.append</name>
|
||||
<value>true</value>
|
||||
</property>
|
||||
<property>
|
||||
<name>dfs.namenode.logging.level</name>
|
||||
<value>DEBUG</value>
|
||||
</property>
|
||||
</configuration>
|
||||
EOF
|
||||
|
||||
cat > $HADOOP_CONF_DIR/slaves <<EOF
|
||||
localhost
|
||||
EOF
|
||||
|
||||
# If we are running from the hdfs repo we need to make sure
|
||||
# HADOOP_BIN_DIR contains the common scripts.
|
||||
# If the bin directory does not and we've got a common jar extract its
|
||||
# bin directory to HADOOP_PREFIX/bin. The bin scripts hdfs-config.sh and
|
||||
# hadoop-config.sh assume the bin directory is named "bin" and that it
|
||||
# is located in HADOOP_PREFIX.
|
||||
unpacked_common_bin_dir=0
|
||||
if [ ! -f $HADOOP_BIN_DIR/hadoop-config.sh ]; then
|
||||
if [ -f $COMMON_JAR ]; then
|
||||
jar xf $COMMON_JAR bin.tgz
|
||||
tar xfz bin.tgz -C $HADOOP_BIN_DIR
|
||||
unpacked_common_bin_dir=1
|
||||
fi
|
||||
if [ "x$HDFS_TEST_JAR" == "x" ]; then
|
||||
echo "HDFS test jar not found! Tried looking in all subdirectories \
|
||||
of $HADOOP_HOME/share/hadoop/hdfs/"
|
||||
exit 1
|
||||
fi
|
||||
|
||||
# Manipulate HADOOP_CONF_DIR too
|
||||
# which is necessary to circumvent bin/hadoop
|
||||
HADOOP_CONF_DIR=$HADOOP_CONF_DIR:$HADOOP_PREFIX/conf
|
||||
echo "Found HDFS test jar at $HDFS_TEST_JAR"
|
||||
|
||||
# set pid file dir so they are not written to /tmp
|
||||
export HADOOP_PID_DIR=$HADOOP_LOG_DIR
|
||||
|
||||
# CLASSPATH initially contains $HADOOP_CONF_DIR
|
||||
CLASSPATH="${HADOOP_CONF_DIR}"
|
||||
# CLASSPATH initially contains $HDFS_TEST_CONF_DIR
|
||||
CLASSPATH="${HDFS_TEST_CONF_DIR}"
|
||||
CLASSPATH=${CLASSPATH}:$JAVA_HOME/lib/tools.jar
|
||||
|
||||
# for developers, add Hadoop classes to CLASSPATH
|
||||
if [ -d "$HADOOP_PREFIX/build/classes" ]; then
|
||||
CLASSPATH=${CLASSPATH}:$HADOOP_PREFIX/build/classes
|
||||
fi
|
||||
if [ -d "$HADOOP_PREFIX/build/web/webapps" ]; then
|
||||
CLASSPATH=${CLASSPATH}:$HADOOP_PREFIX/build/web
|
||||
fi
|
||||
if [ -d "$HADOOP_PREFIX/build/test/classes" ]; then
|
||||
CLASSPATH=${CLASSPATH}:$HADOOP_PREFIX/build/test/classes
|
||||
fi
|
||||
|
||||
# add Clover jar file needed for code coverage runs
|
||||
CLASSPATH=${CLASSPATH}:${CLOVER_JAR};
|
||||
|
||||
# so that filenames w/ spaces are handled correctly in loops below
|
||||
IFS=
|
||||
IFS=$'\n'
|
||||
|
||||
# add libs to CLASSPATH
|
||||
for f in $HADOOP_PREFIX/lib/*.jar; do
|
||||
CLASSPATH=${CLASSPATH}:$f;
|
||||
done
|
||||
JAR_DIRS="$HADOOP_HOME/share/hadoop/common/lib/
|
||||
$HADOOP_HOME/share/hadoop/common/
|
||||
$HADOOP_HOME/share/hadoop/hdfs
|
||||
$HADOOP_HOME/share/hadoop/hdfs/lib/"
|
||||
|
||||
for f in $HADOOP_PREFIX/*.jar; do
|
||||
CLASSPATH=${CLASSPATH}:$f
|
||||
done
|
||||
for f in $HADOOP_PREFIX/lib/jsp-2.1/*.jar; do
|
||||
CLASSPATH=${CLASSPATH}:$f;
|
||||
done
|
||||
|
||||
if [ -d "$COMMON_BUILD_DIR" ]; then
|
||||
CLASSPATH=$CLASSPATH:$COMMON_JAR
|
||||
for f in $COMMON_BUILD_DIR/*.jar; do
|
||||
CLASSPATH=${CLASSPATH}:$f;
|
||||
done
|
||||
fi
|
||||
for d in $JAR_DIRS; do
|
||||
for j in $d/*.jar; do
|
||||
CLASSPATH=${CLASSPATH}:$j
|
||||
done;
|
||||
done;
|
||||
|
||||
# restore ordinary behaviour
|
||||
unset IFS
|
||||
|
|
@ -178,21 +116,37 @@ echo LIB_JVM_DIR = $LIB_JVM_DIR
|
|||
echo "++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++"
|
||||
# Put delays to ensure hdfs is up and running and also shuts down
|
||||
# after the tests are complete
|
||||
cd $HADOOP_PREFIX
|
||||
echo Y | $HADOOP_BIN_DIR/hdfs namenode -format &&
|
||||
$HADOOP_BIN_DIR/hadoop-daemon.sh --script $HADOOP_BIN_DIR/hdfs start namenode && sleep 2
|
||||
$HADOOP_BIN_DIR/hadoop-daemon.sh --script $HADOOP_BIN_DIR/hdfs start datanode && sleep 2
|
||||
echo "Wait 30s for the datanode to start up..."
|
||||
sleep 30
|
||||
CLASSPATH=$CLASSPATH LD_PRELOAD="$LIB_JVM_DIR/libjvm.so:$LIBHDFS_INSTALL_DIR/libhdfs.so:" $LIBHDFS_BUILD_DIR/$HDFS_TEST
|
||||
BUILD_STATUS=$?
|
||||
sleep 3
|
||||
$HADOOP_BIN_DIR/hadoop-daemon.sh --script $HADOOP_BIN_DIR/hdfs stop datanode && sleep 2
|
||||
$HADOOP_BIN_DIR/hadoop-daemon.sh --script $HADOOP_BIN_DIR/hdfs stop namenode && sleep 2
|
||||
rm $HDFS_TEST_CONF_DIR/core-site.xml
|
||||
|
||||
if [ $unpacked_common_bin_dir -eq 1 ]; then
|
||||
rm -rf bin.tgz
|
||||
$HADOOP_HOME/bin/hadoop jar $HDFS_TEST_JAR \
|
||||
org.apache.hadoop.test.MiniDFSClusterManager \
|
||||
-format -nnport 20300 -writeConfig $HDFS_TEST_CONF_DIR/core-site.xml \
|
||||
> /tmp/libhdfs-test-cluster.out 2>&1 &
|
||||
|
||||
MINI_CLUSTER_PID=$!
|
||||
for i in {1..15}; do
|
||||
echo "Waiting for DFS cluster, attempt $i of 15"
|
||||
[ -f $HDFS_TEST_CONF_DIR/core-site.xml ] && break;
|
||||
sleep 2
|
||||
done
|
||||
|
||||
if [ ! -f $HDFS_TEST_CONF_DIR/core-site.xml ]; then
|
||||
echo "Cluster did not come up in 30s"
|
||||
kill -9 $MINI_CLUSTER_PID
|
||||
exit 1
|
||||
fi
|
||||
|
||||
echo exiting with $BUILD_STATUS
|
||||
echo "Cluster up, running tests"
|
||||
# Disable error checking to make sure we get to cluster cleanup
|
||||
set +e
|
||||
|
||||
CLASSPATH=$CLASSPATH \
|
||||
LD_PRELOAD="$LIB_JVM_DIR/libjvm.so:$LIBHDFS_INSTALL_DIR/libhdfs.so:" \
|
||||
$LIBHDFS_BUILD_DIR/$HDFS_TEST
|
||||
|
||||
BUILD_STATUS=$?
|
||||
|
||||
echo "Tearing cluster down"
|
||||
kill -9 $MINI_CLUSTER_PID
|
||||
echo "Exiting with $BUILD_STATUS"
|
||||
exit $BUILD_STATUS
|
||||
|
|
|
|||
Loading…
Reference in New Issue