HBASE-13356 HBase should provide an InputFormat supporting multiple scans in mapreduce jobs over snapshots (Andrew Mains)
This commit is contained in:
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@ -0,0 +1,130 @@
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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package org.apache.hadoop.hbase.mapred;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.hbase.client.Result;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
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import org.apache.hadoop.hbase.mapreduce.MultiTableSnapshotInputFormatImpl;
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import org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormatImpl;
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import org.apache.hadoop.mapred.InputFormat;
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import org.apache.hadoop.mapred.InputSplit;
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import org.apache.hadoop.mapred.JobConf;
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import org.apache.hadoop.mapred.RecordReader;
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import org.apache.hadoop.mapred.Reporter;
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import java.io.IOException;
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import java.util.Collection;
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import java.util.List;
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import java.util.Map;
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/**
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* MultiTableSnapshotInputFormat generalizes {@link org.apache.hadoop.hbase.mapred
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* .TableSnapshotInputFormat}
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* allowing a MapReduce job to run over one or more table snapshots, with one or more scans
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* configured for each.
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* Internally, the input format delegates to {@link org.apache.hadoop.hbase.mapreduce
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* .TableSnapshotInputFormat}
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* and thus has the same performance advantages; see {@link org.apache.hadoop.hbase.mapreduce
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* .TableSnapshotInputFormat} for
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* more details.
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* Usage is similar to TableSnapshotInputFormat, with the following exception:
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* initMultiTableSnapshotMapperJob takes in a map
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* from snapshot name to a collection of scans. For each snapshot in the map, each corresponding
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* scan will be applied;
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* the overall dataset for the job is defined by the concatenation of the regions and tables
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* included in each snapshot/scan
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* pair.
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* {@link org.apache.hadoop.hbase.mapred.TableMapReduceUtil#initMultiTableSnapshotMapperJob(Map,
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* Class, Class, Class, JobConf, boolean, Path)}
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* can be used to configure the job.
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* <pre>{@code
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* Job job = new Job(conf);
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* Map<String, Collection<Scan>> snapshotScans = ImmutableMap.of(
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* "snapshot1", ImmutableList.of(new Scan(Bytes.toBytes("a"), Bytes.toBytes("b"))),
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* "snapshot2", ImmutableList.of(new Scan(Bytes.toBytes("1"), Bytes.toBytes("2")))
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* );
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* Path restoreDir = new Path("/tmp/snapshot_restore_dir")
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* TableMapReduceUtil.initTableSnapshotMapperJob(
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* snapshotScans, MyTableMapper.class, MyMapKeyOutput.class,
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* MyMapOutputValueWritable.class, job, true, restoreDir);
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* }
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* </pre>
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* Internally, this input format restores each snapshot into a subdirectory of the given tmp
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* directory. Input splits and
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* record readers are created as described in {@link org.apache.hadoop.hbase.mapreduce
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* .TableSnapshotInputFormat}
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* (one per region).
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* See {@link org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat} for more notes on
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* permissioning; the
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* same caveats apply here.
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*
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* @see org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat
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* @see org.apache.hadoop.hbase.client.TableSnapshotScanner
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*/
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@InterfaceAudience.Public
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@InterfaceStability.Evolving
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public class MultiTableSnapshotInputFormat extends TableSnapshotInputFormat
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implements InputFormat<ImmutableBytesWritable, Result> {
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private final MultiTableSnapshotInputFormatImpl delegate;
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public MultiTableSnapshotInputFormat() {
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this.delegate = new MultiTableSnapshotInputFormatImpl();
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}
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@Override
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public InputSplit[] getSplits(JobConf job, int numSplits) throws IOException {
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List<TableSnapshotInputFormatImpl.InputSplit> splits = delegate.getSplits(job);
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InputSplit[] results = new InputSplit[splits.size()];
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for (int i = 0; i < splits.size(); i++) {
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results[i] = new TableSnapshotRegionSplit(splits.get(i));
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}
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return results;
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}
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@Override
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public RecordReader<ImmutableBytesWritable, Result> getRecordReader(InputSplit split, JobConf job,
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Reporter reporter) throws IOException {
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return new TableSnapshotRecordReader((TableSnapshotRegionSplit) split, job);
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}
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/**
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* Configure conf to read from snapshotScans, with snapshots restored to a subdirectory of
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* restoreDir.
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* Sets: {@link org.apache.hadoop.hbase.mapreduce
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* .MultiTableSnapshotInputFormatImpl#RESTORE_DIRS_KEY},
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* {@link org.apache.hadoop.hbase.mapreduce
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* .MultiTableSnapshotInputFormatImpl#SNAPSHOT_TO_SCANS_KEY}
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*
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* @param conf
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* @param snapshotScans
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* @param restoreDir
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* @throws IOException
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*/
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public static void setInput(Configuration conf, Map<String, Collection<Scan>> snapshotScans,
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Path restoreDir) throws IOException {
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new MultiTableSnapshotInputFormatImpl().setInput(conf, snapshotScans, restoreDir);
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}
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}
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@ -18,37 +18,32 @@
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*/
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package org.apache.hadoop.hbase.mapred;
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import java.io.IOException;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.HBaseConfiguration;
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import org.apache.hadoop.hbase.MetaTableAccessor;
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import org.apache.hadoop.hbase.TableName;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.hbase.client.Connection;
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import org.apache.hadoop.hbase.client.ConnectionFactory;
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import org.apache.hadoop.hbase.client.Put;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
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import org.apache.hadoop.hbase.mapreduce.MutationSerialization;
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import org.apache.hadoop.hbase.mapreduce.ResultSerialization;
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import org.apache.hadoop.hbase.security.token.AuthenticationTokenIdentifier;
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import org.apache.hadoop.hbase.security.token.AuthenticationTokenSelector;
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import org.apache.hadoop.hbase.security.User;
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import org.apache.hadoop.hbase.security.UserProvider;
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import org.apache.hadoop.hbase.security.token.TokenUtil;
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import org.apache.hadoop.hbase.zookeeper.ZKClusterId;
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import org.apache.hadoop.hbase.zookeeper.ZooKeeperWatcher;
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import org.apache.hadoop.io.Text;
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import org.apache.hadoop.mapred.FileInputFormat;
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import org.apache.hadoop.mapred.InputFormat;
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import org.apache.hadoop.mapred.JobConf;
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import org.apache.hadoop.mapred.OutputFormat;
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import org.apache.hadoop.mapred.TextInputFormat;
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import org.apache.hadoop.mapred.TextOutputFormat;
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import org.apache.hadoop.security.token.Token;
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import org.apache.zookeeper.KeeperException;
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import java.io.IOException;
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import java.util.Collection;
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import java.util.Map;
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/**
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* Utility for {@link TableMap} and {@link TableReduce}
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@ -127,6 +122,40 @@ public class TableMapReduceUtil {
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}
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}
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/**
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* Sets up the job for reading from one or more multiple table snapshots, with one or more scans
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* per snapshot.
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* It bypasses hbase servers and read directly from snapshot files.
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*
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* @param snapshotScans map of snapshot name to scans on that snapshot.
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* @param mapper The mapper class to use.
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* @param outputKeyClass The class of the output key.
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* @param outputValueClass The class of the output value.
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* @param job The current job to adjust. Make sure the passed job is
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* carrying all necessary HBase configuration.
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* @param addDependencyJars upload HBase jars and jars for any of the configured
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* job classes via the distributed cache (tmpjars).
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*/
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public static void initMultiTableSnapshotMapperJob(Map<String, Collection<Scan>> snapshotScans,
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Class<? extends TableMap> mapper, Class<?> outputKeyClass, Class<?> outputValueClass,
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JobConf job, boolean addDependencyJars, Path tmpRestoreDir) throws IOException {
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MultiTableSnapshotInputFormat.setInput(job, snapshotScans, tmpRestoreDir);
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job.setInputFormat(MultiTableSnapshotInputFormat.class);
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if (outputValueClass != null) {
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job.setMapOutputValueClass(outputValueClass);
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}
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if (outputKeyClass != null) {
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job.setMapOutputKeyClass(outputKeyClass);
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}
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job.setMapperClass(mapper);
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if (addDependencyJars) {
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addDependencyJars(job);
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}
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org.apache.hadoop.hbase.mapreduce.TableMapReduceUtil.resetCacheConfig(job);
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}
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/**
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* Sets up the job for reading from a table snapshot. It bypasses hbase servers
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* and read directly from snapshot files.
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@ -18,12 +18,13 @@
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package org.apache.hadoop.hbase.mapred;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.HRegionInfo;
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import org.apache.hadoop.hbase.HTableDescriptor;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.hbase.client.Result;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
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import org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormatImpl;
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import org.apache.hadoop.mapred.InputFormat;
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@ -60,8 +61,9 @@ public class TableSnapshotInputFormat implements InputFormat<ImmutableBytesWrita
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}
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public TableSnapshotRegionSplit(HTableDescriptor htd, HRegionInfo regionInfo,
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List<String> locations) {
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this.delegate = new TableSnapshotInputFormatImpl.InputSplit(htd, regionInfo, locations);
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List<String> locations, Scan scan, Path restoreDir) {
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this.delegate =
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new TableSnapshotInputFormatImpl.InputSplit(htd, regionInfo, locations, scan, restoreDir);
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}
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@Override
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@ -0,0 +1,108 @@
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
|
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* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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package org.apache.hadoop.hbase.mapreduce;
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import com.google.common.collect.Lists;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.mapreduce.InputSplit;
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import org.apache.hadoop.mapreduce.JobContext;
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import java.io.IOException;
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import java.util.Collection;
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import java.util.List;
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import java.util.Map;
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/**
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* MultiTableSnapshotInputFormat generalizes
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* {@link org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat}
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* allowing a MapReduce job to run over one or more table snapshots, with one or more scans
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* configured for each.
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* Internally, the input format delegates to
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* {@link org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat}
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* and thus has the same performance advantages;
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* see {@link org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat} for
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* more details.
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* Usage is similar to TableSnapshotInputFormat, with the following exception:
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* initMultiTableSnapshotMapperJob takes in a map
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* from snapshot name to a collection of scans. For each snapshot in the map, each corresponding
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* scan will be applied;
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* the overall dataset for the job is defined by the concatenation of the regions and tables
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* included in each snapshot/scan
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* pair.
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* {@link org.apache.hadoop.hbase.mapreduce.TableMapReduceUtil#initMultiTableSnapshotMapperJob
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* (java.util.Map, Class, Class, Class, org.apache.hadoop.mapreduce.Job, boolean, org.apache
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* .hadoop.fs.Path)}
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* can be used to configure the job.
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* <pre>{@code
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* Job job = new Job(conf);
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* Map<String, Collection<Scan>> snapshotScans = ImmutableMap.of(
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* "snapshot1", ImmutableList.of(new Scan(Bytes.toBytes("a"), Bytes.toBytes("b"))),
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* "snapshot2", ImmutableList.of(new Scan(Bytes.toBytes("1"), Bytes.toBytes("2")))
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* );
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* Path restoreDir = new Path("/tmp/snapshot_restore_dir")
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* TableMapReduceUtil.initTableSnapshotMapperJob(
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* snapshotScans, MyTableMapper.class, MyMapKeyOutput.class,
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* MyMapOutputValueWritable.class, job, true, restoreDir);
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* }
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* </pre>
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* Internally, this input format restores each snapshot into a subdirectory of the given tmp
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* directory. Input splits and
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* record readers are created as described in {@link org.apache.hadoop.hbase.mapreduce
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* .TableSnapshotInputFormat}
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* (one per region).
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* See {@link org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat} for more notes on
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* permissioning; the
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* same caveats apply here.
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*
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* @see org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormat
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* @see org.apache.hadoop.hbase.client.TableSnapshotScanner
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*/
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@InterfaceAudience.Public
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@InterfaceStability.Evolving
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public class MultiTableSnapshotInputFormat extends TableSnapshotInputFormat {
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private final MultiTableSnapshotInputFormatImpl delegate;
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public MultiTableSnapshotInputFormat() {
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this.delegate = new MultiTableSnapshotInputFormatImpl();
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}
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@Override
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public List<InputSplit> getSplits(JobContext jobContext)
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throws IOException, InterruptedException {
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List<TableSnapshotInputFormatImpl.InputSplit> splits =
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delegate.getSplits(jobContext.getConfiguration());
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List<InputSplit> rtn = Lists.newArrayListWithCapacity(splits.size());
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for (TableSnapshotInputFormatImpl.InputSplit split : splits) {
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rtn.add(new TableSnapshotInputFormat.TableSnapshotRegionSplit(split));
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}
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return rtn;
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}
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public static void setInput(Configuration configuration,
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Map<String, Collection<Scan>> snapshotScans, Path tmpRestoreDir) throws IOException {
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new MultiTableSnapshotInputFormatImpl().setInput(configuration, snapshotScans, tmpRestoreDir);
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}
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}
|
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@ -0,0 +1,252 @@
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/*
|
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* Licensed to the Apache Software Foundation (ASF) under one
|
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* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
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|
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package org.apache.hadoop.hbase.mapreduce;
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import com.google.common.collect.Lists;
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import com.google.common.collect.Maps;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.HRegionInfo;
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import org.apache.hadoop.hbase.classification.InterfaceAudience;
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import org.apache.hadoop.hbase.classification.InterfaceStability;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.hbase.snapshot.RestoreSnapshotHelper;
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import org.apache.hadoop.hbase.snapshot.SnapshotManifest;
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import org.apache.hadoop.hbase.util.ConfigurationUtil;
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import org.apache.hadoop.hbase.util.FSUtils;
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import java.io.IOException;
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import java.util.AbstractMap;
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import java.util.Collection;
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import java.util.List;
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import java.util.Map;
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import java.util.UUID;
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/**
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* Shared implementation of mapreduce code over multiple table snapshots.
|
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* Utilized by both mapreduce ({@link org.apache.hadoop.hbase.mapreduce
|
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* .MultiTableSnapshotInputFormat} and mapred
|
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* ({@link org.apache.hadoop.hbase.mapred.MultiTableSnapshotInputFormat} implementations.
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*/
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@InterfaceAudience.LimitedPrivate({ "HBase" })
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@InterfaceStability.Evolving
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public class MultiTableSnapshotInputFormatImpl {
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private static final Log LOG = LogFactory.getLog(MultiTableSnapshotInputFormatImpl.class);
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public static final String RESTORE_DIRS_KEY =
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"hbase.MultiTableSnapshotInputFormat.restore.snapshotDirMapping";
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public static final String SNAPSHOT_TO_SCANS_KEY =
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"hbase.MultiTableSnapshotInputFormat.snapshotsToScans";
|
||||
|
||||
/**
|
||||
* Configure conf to read from snapshotScans, with snapshots restored to a subdirectory of
|
||||
* restoreDir.
|
||||
* Sets: {@link #RESTORE_DIRS_KEY}, {@link #SNAPSHOT_TO_SCANS_KEY}
|
||||
*
|
||||
* @param conf
|
||||
* @param snapshotScans
|
||||
* @param restoreDir
|
||||
* @throws IOException
|
||||
*/
|
||||
public void setInput(Configuration conf, Map<String, Collection<Scan>> snapshotScans,
|
||||
Path restoreDir) throws IOException {
|
||||
Path rootDir = FSUtils.getRootDir(conf);
|
||||
FileSystem fs = rootDir.getFileSystem(conf);
|
||||
|
||||
setSnapshotToScans(conf, snapshotScans);
|
||||
Map<String, Path> restoreDirs =
|
||||
generateSnapshotToRestoreDirMapping(snapshotScans.keySet(), restoreDir);
|
||||
setSnapshotDirs(conf, restoreDirs);
|
||||
restoreSnapshots(conf, restoreDirs, fs);
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the list of splits extracted from the scans/snapshots pushed to conf by
|
||||
* {@link
|
||||
* #setInput(org.apache.hadoop.conf.Configuration, java.util.Map, org.apache.hadoop.fs.Path)}
|
||||
*
|
||||
* @param conf Configuration to determine splits from
|
||||
* @return Return the list of splits extracted from the scans/snapshots pushed to conf
|
||||
* @throws IOException
|
||||
*/
|
||||
public List<TableSnapshotInputFormatImpl.InputSplit> getSplits(Configuration conf)
|
||||
throws IOException {
|
||||
Path rootDir = FSUtils.getRootDir(conf);
|
||||
FileSystem fs = rootDir.getFileSystem(conf);
|
||||
|
||||
List<TableSnapshotInputFormatImpl.InputSplit> rtn = Lists.newArrayList();
|
||||
|
||||
Map<String, Collection<Scan>> snapshotsToScans = getSnapshotsToScans(conf);
|
||||
Map<String, Path> snapshotsToRestoreDirs = getSnapshotDirs(conf);
|
||||
for (Map.Entry<String, Collection<Scan>> entry : snapshotsToScans.entrySet()) {
|
||||
String snapshotName = entry.getKey();
|
||||
|
||||
Path restoreDir = snapshotsToRestoreDirs.get(snapshotName);
|
||||
|
||||
SnapshotManifest manifest =
|
||||
TableSnapshotInputFormatImpl.getSnapshotManifest(conf, snapshotName, rootDir, fs);
|
||||
List<HRegionInfo> regionInfos =
|
||||
TableSnapshotInputFormatImpl.getRegionInfosFromManifest(manifest);
|
||||
|
||||
for (Scan scan : entry.getValue()) {
|
||||
List<TableSnapshotInputFormatImpl.InputSplit> splits =
|
||||
TableSnapshotInputFormatImpl.getSplits(scan, manifest, regionInfos, restoreDir, conf);
|
||||
rtn.addAll(splits);
|
||||
}
|
||||
}
|
||||
return rtn;
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve the snapshot name -> list<scan> mapping pushed to configuration by
|
||||
* {@link #setSnapshotToScans(org.apache.hadoop.conf.Configuration, java.util.Map)}
|
||||
*
|
||||
* @param conf Configuration to extract name -> list<scan> mappings from.
|
||||
* @return the snapshot name -> list<scan> mapping pushed to configuration
|
||||
* @throws IOException
|
||||
*/
|
||||
public Map<String, Collection<Scan>> getSnapshotsToScans(Configuration conf) throws IOException {
|
||||
|
||||
Map<String, Collection<Scan>> rtn = Maps.newHashMap();
|
||||
|
||||
for (Map.Entry<String, String> entry : ConfigurationUtil
|
||||
.getKeyValues(conf, SNAPSHOT_TO_SCANS_KEY)) {
|
||||
String snapshotName = entry.getKey();
|
||||
String scan = entry.getValue();
|
||||
|
||||
Collection<Scan> snapshotScans = rtn.get(snapshotName);
|
||||
if (snapshotScans == null) {
|
||||
snapshotScans = Lists.newArrayList();
|
||||
rtn.put(snapshotName, snapshotScans);
|
||||
}
|
||||
|
||||
snapshotScans.add(TableMapReduceUtil.convertStringToScan(scan));
|
||||
}
|
||||
|
||||
return rtn;
|
||||
}
|
||||
|
||||
/**
|
||||
* Push snapshotScans to conf (under the key {@link #SNAPSHOT_TO_SCANS_KEY})
|
||||
*
|
||||
* @param conf
|
||||
* @param snapshotScans
|
||||
* @throws IOException
|
||||
*/
|
||||
public void setSnapshotToScans(Configuration conf, Map<String, Collection<Scan>> snapshotScans)
|
||||
throws IOException {
|
||||
// flatten out snapshotScans for serialization to the job conf
|
||||
List<Map.Entry<String, String>> snapshotToSerializedScans = Lists.newArrayList();
|
||||
|
||||
for (Map.Entry<String, Collection<Scan>> entry : snapshotScans.entrySet()) {
|
||||
String snapshotName = entry.getKey();
|
||||
Collection<Scan> scans = entry.getValue();
|
||||
|
||||
// serialize all scans and map them to the appropriate snapshot
|
||||
for (Scan scan : scans) {
|
||||
snapshotToSerializedScans.add(new AbstractMap.SimpleImmutableEntry<>(snapshotName,
|
||||
TableMapReduceUtil.convertScanToString(scan)));
|
||||
}
|
||||
}
|
||||
|
||||
ConfigurationUtil.setKeyValues(conf, SNAPSHOT_TO_SCANS_KEY, snapshotToSerializedScans);
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve the directories into which snapshots have been restored from
|
||||
* ({@link #RESTORE_DIRS_KEY})
|
||||
*
|
||||
* @param conf Configuration to extract restore directories from
|
||||
* @return the directories into which snapshots have been restored from
|
||||
* @throws IOException
|
||||
*/
|
||||
public Map<String, Path> getSnapshotDirs(Configuration conf) throws IOException {
|
||||
List<Map.Entry<String, String>> kvps = ConfigurationUtil.getKeyValues(conf, RESTORE_DIRS_KEY);
|
||||
Map<String, Path> rtn = Maps.newHashMapWithExpectedSize(kvps.size());
|
||||
|
||||
for (Map.Entry<String, String> kvp : kvps) {
|
||||
rtn.put(kvp.getKey(), new Path(kvp.getValue()));
|
||||
}
|
||||
|
||||
return rtn;
|
||||
}
|
||||
|
||||
public void setSnapshotDirs(Configuration conf, Map<String, Path> snapshotDirs) {
|
||||
Map<String, String> toSet = Maps.newHashMap();
|
||||
|
||||
for (Map.Entry<String, Path> entry : snapshotDirs.entrySet()) {
|
||||
toSet.put(entry.getKey(), entry.getValue().toString());
|
||||
}
|
||||
|
||||
ConfigurationUtil.setKeyValues(conf, RESTORE_DIRS_KEY, toSet.entrySet());
|
||||
}
|
||||
|
||||
/**
|
||||
* Generate a random path underneath baseRestoreDir for each snapshot in snapshots and
|
||||
* return a map from the snapshot to the restore directory.
|
||||
*
|
||||
* @param snapshots collection of snapshot names to restore
|
||||
* @param baseRestoreDir base directory under which all snapshots in snapshots will be restored
|
||||
* @return a mapping from snapshot name to the directory in which that snapshot has been restored
|
||||
*/
|
||||
private Map<String, Path> generateSnapshotToRestoreDirMapping(Collection<String> snapshots,
|
||||
Path baseRestoreDir) {
|
||||
Map<String, Path> rtn = Maps.newHashMap();
|
||||
|
||||
for (String snapshotName : snapshots) {
|
||||
Path restoreSnapshotDir =
|
||||
new Path(baseRestoreDir, snapshotName + "__" + UUID.randomUUID().toString());
|
||||
rtn.put(snapshotName, restoreSnapshotDir);
|
||||
}
|
||||
|
||||
return rtn;
|
||||
}
|
||||
|
||||
/**
|
||||
* Restore each (snapshot name, restore directory) pair in snapshotToDir
|
||||
*
|
||||
* @param conf configuration to restore with
|
||||
* @param snapshotToDir mapping from snapshot names to restore directories
|
||||
* @param fs filesystem to do snapshot restoration on
|
||||
* @throws IOException
|
||||
*/
|
||||
public void restoreSnapshots(Configuration conf, Map<String, Path> snapshotToDir, FileSystem fs)
|
||||
throws IOException {
|
||||
// TODO: restore from record readers to parallelize.
|
||||
Path rootDir = FSUtils.getRootDir(conf);
|
||||
|
||||
for (Map.Entry<String, Path> entry : snapshotToDir.entrySet()) {
|
||||
String snapshotName = entry.getKey();
|
||||
Path restoreDir = entry.getValue();
|
||||
LOG.info("Restoring snapshot " + snapshotName + " into " + restoreDir
|
||||
+ " for MultiTableSnapshotInputFormat");
|
||||
restoreSnapshot(conf, snapshotName, rootDir, restoreDir, fs);
|
||||
}
|
||||
}
|
||||
|
||||
void restoreSnapshot(Configuration conf, String snapshotName, Path rootDir, Path restoreDir,
|
||||
FileSystem fs) throws IOException {
|
||||
RestoreSnapshotHelper.copySnapshotForScanner(conf, fs, rootDir, restoreDir, snapshotName);
|
||||
}
|
||||
|
||||
}
|
|
@ -18,20 +18,8 @@
|
|||
*/
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import java.io.File;
|
||||
import java.io.IOException;
|
||||
import java.net.URL;
|
||||
import java.net.URLDecoder;
|
||||
import java.util.ArrayList;
|
||||
import java.util.Enumeration;
|
||||
import java.util.HashMap;
|
||||
import java.util.HashSet;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.Set;
|
||||
import java.util.zip.ZipEntry;
|
||||
import java.util.zip.ZipFile;
|
||||
|
||||
import com.google.protobuf.InvalidProtocolBufferException;
|
||||
import com.yammer.metrics.core.MetricsRegistry;
|
||||
import org.apache.commons.logging.Log;
|
||||
import org.apache.commons.logging.LogFactory;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
|
@ -62,6 +50,21 @@ import org.apache.hadoop.mapreduce.Job;
|
|||
import org.apache.hadoop.util.StringUtils;
|
||||
import com.google.protobuf.InvalidProtocolBufferException;
|
||||
|
||||
import java.io.File;
|
||||
import java.io.IOException;
|
||||
import java.net.URL;
|
||||
import java.net.URLDecoder;
|
||||
import java.util.ArrayList;
|
||||
import java.util.Collection;
|
||||
import java.util.Enumeration;
|
||||
import java.util.HashMap;
|
||||
import java.util.HashSet;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.Set;
|
||||
import java.util.zip.ZipEntry;
|
||||
import java.util.zip.ZipFile;
|
||||
|
||||
/**
|
||||
* Utility for {@link TableMapper} and {@link TableReducer}
|
||||
*/
|
||||
|
@ -305,6 +308,44 @@ public class TableMapReduceUtil {
|
|||
conf.unset(HConstants.BUCKET_CACHE_IOENGINE_KEY);
|
||||
}
|
||||
|
||||
/**
|
||||
* Sets up the job for reading from one or more table snapshots, with one or more scans
|
||||
* per snapshot.
|
||||
* It bypasses hbase servers and read directly from snapshot files.
|
||||
*
|
||||
* @param snapshotScans map of snapshot name to scans on that snapshot.
|
||||
* @param mapper The mapper class to use.
|
||||
* @param outputKeyClass The class of the output key.
|
||||
* @param outputValueClass The class of the output value.
|
||||
* @param job The current job to adjust. Make sure the passed job is
|
||||
* carrying all necessary HBase configuration.
|
||||
* @param addDependencyJars upload HBase jars and jars for any of the configured
|
||||
* job classes via the distributed cache (tmpjars).
|
||||
*/
|
||||
public static void initMultiTableSnapshotMapperJob(Map<String, Collection<Scan>> snapshotScans,
|
||||
Class<? extends TableMapper> mapper, Class<?> outputKeyClass, Class<?> outputValueClass,
|
||||
Job job, boolean addDependencyJars, Path tmpRestoreDir) throws IOException {
|
||||
MultiTableSnapshotInputFormat.setInput(job.getConfiguration(), snapshotScans, tmpRestoreDir);
|
||||
|
||||
job.setInputFormatClass(MultiTableSnapshotInputFormat.class);
|
||||
if (outputValueClass != null) {
|
||||
job.setMapOutputValueClass(outputValueClass);
|
||||
}
|
||||
if (outputKeyClass != null) {
|
||||
job.setMapOutputKeyClass(outputKeyClass);
|
||||
}
|
||||
job.setMapperClass(mapper);
|
||||
Configuration conf = job.getConfiguration();
|
||||
HBaseConfiguration.merge(conf, HBaseConfiguration.create(conf));
|
||||
|
||||
if (addDependencyJars) {
|
||||
addDependencyJars(job);
|
||||
addDependencyJars(job.getConfiguration(), MetricsRegistry.class);
|
||||
}
|
||||
|
||||
resetCacheConfig(job.getConfiguration());
|
||||
}
|
||||
|
||||
/**
|
||||
* Sets up the job for reading from a table snapshot. It bypasses hbase servers
|
||||
* and read directly from snapshot files.
|
||||
|
|
|
@ -18,19 +18,14 @@
|
|||
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import java.io.DataInput;
|
||||
import java.io.DataOutput;
|
||||
import java.io.IOException;
|
||||
import java.lang.reflect.Method;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
|
||||
import org.apache.hadoop.hbase.classification.InterfaceAudience;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceStability;
|
||||
import com.google.common.annotations.VisibleForTesting;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
import org.apache.hadoop.hbase.HRegionInfo;
|
||||
import org.apache.hadoop.hbase.HTableDescriptor;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceAudience;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceStability;
|
||||
import org.apache.hadoop.hbase.client.Result;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.client.metrics.ScanMetrics;
|
||||
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
||||
import org.apache.hadoop.io.Writable;
|
||||
|
@ -41,7 +36,12 @@ import org.apache.hadoop.mapreduce.JobContext;
|
|||
import org.apache.hadoop.mapreduce.RecordReader;
|
||||
import org.apache.hadoop.mapreduce.TaskAttemptContext;
|
||||
|
||||
import com.google.common.annotations.VisibleForTesting;
|
||||
import java.io.DataInput;
|
||||
import java.io.DataOutput;
|
||||
import java.io.IOException;
|
||||
import java.lang.reflect.Method;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
|
||||
/**
|
||||
* TableSnapshotInputFormat allows a MapReduce job to run over a table snapshot. The job
|
||||
|
@ -98,8 +98,9 @@ public class TableSnapshotInputFormat extends InputFormat<ImmutableBytesWritable
|
|||
}
|
||||
|
||||
public TableSnapshotRegionSplit(HTableDescriptor htd, HRegionInfo regionInfo,
|
||||
List<String> locations) {
|
||||
this.delegate = new TableSnapshotInputFormatImpl.InputSplit(htd, regionInfo, locations);
|
||||
List<String> locations, Scan scan, Path restoreDir) {
|
||||
this.delegate =
|
||||
new TableSnapshotInputFormatImpl.InputSplit(htd, regionInfo, locations, scan, restoreDir);
|
||||
}
|
||||
|
||||
@Override
|
||||
|
|
|
@ -18,8 +18,9 @@
|
|||
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import org.apache.hadoop.hbase.classification.InterfaceAudience;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceStability;
|
||||
import com.google.common.collect.Lists;
|
||||
import org.apache.commons.logging.Log;
|
||||
import org.apache.commons.logging.LogFactory;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.fs.FileSystem;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
|
@ -28,6 +29,8 @@ import org.apache.hadoop.hbase.HDFSBlocksDistribution;
|
|||
import org.apache.hadoop.hbase.HDFSBlocksDistribution.HostAndWeight;
|
||||
import org.apache.hadoop.hbase.HRegionInfo;
|
||||
import org.apache.hadoop.hbase.HTableDescriptor;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceAudience;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceStability;
|
||||
import org.apache.hadoop.hbase.client.ClientSideRegionScanner;
|
||||
import org.apache.hadoop.hbase.client.IsolationLevel;
|
||||
import org.apache.hadoop.hbase.client.Result;
|
||||
|
@ -61,9 +64,11 @@ public class TableSnapshotInputFormatImpl {
|
|||
// TODO: Snapshots files are owned in fs by the hbase user. There is no
|
||||
// easy way to delegate access.
|
||||
|
||||
public static final Log LOG = LogFactory.getLog(TableSnapshotInputFormatImpl.class);
|
||||
|
||||
private static final String SNAPSHOT_NAME_KEY = "hbase.TableSnapshotInputFormat.snapshot.name";
|
||||
// key for specifying the root dir of the restored snapshot
|
||||
private static final String RESTORE_DIR_KEY = "hbase.TableSnapshotInputFormat.restore.dir";
|
||||
protected static final String RESTORE_DIR_KEY = "hbase.TableSnapshotInputFormat.restore.dir";
|
||||
|
||||
/** See {@link #getBestLocations(Configuration, HDFSBlocksDistribution)} */
|
||||
private static final String LOCALITY_CUTOFF_MULTIPLIER =
|
||||
|
@ -74,14 +79,18 @@ public class TableSnapshotInputFormatImpl {
|
|||
* Implementation class for InputSplit logic common between mapred and mapreduce.
|
||||
*/
|
||||
public static class InputSplit implements Writable {
|
||||
|
||||
private HTableDescriptor htd;
|
||||
private HRegionInfo regionInfo;
|
||||
private String[] locations;
|
||||
private String scan;
|
||||
private String restoreDir;
|
||||
|
||||
// constructor for mapreduce framework / Writable
|
||||
public InputSplit() {}
|
||||
|
||||
public InputSplit(HTableDescriptor htd, HRegionInfo regionInfo, List<String> locations) {
|
||||
public InputSplit(HTableDescriptor htd, HRegionInfo regionInfo, List<String> locations,
|
||||
Scan scan, Path restoreDir) {
|
||||
this.htd = htd;
|
||||
this.regionInfo = regionInfo;
|
||||
if (locations == null || locations.isEmpty()) {
|
||||
|
@ -89,6 +98,25 @@ public class TableSnapshotInputFormatImpl {
|
|||
} else {
|
||||
this.locations = locations.toArray(new String[locations.size()]);
|
||||
}
|
||||
try {
|
||||
this.scan = scan != null ? TableMapReduceUtil.convertScanToString(scan) : "";
|
||||
} catch (IOException e) {
|
||||
LOG.warn("Failed to convert Scan to String", e);
|
||||
}
|
||||
|
||||
this.restoreDir = restoreDir.toString();
|
||||
}
|
||||
|
||||
public HTableDescriptor getHtd() {
|
||||
return htd;
|
||||
}
|
||||
|
||||
public String getScan() {
|
||||
return scan;
|
||||
}
|
||||
|
||||
public String getRestoreDir() {
|
||||
return restoreDir;
|
||||
}
|
||||
|
||||
public long getLength() {
|
||||
|
@ -128,6 +156,10 @@ public class TableSnapshotInputFormatImpl {
|
|||
byte[] buf = baos.toByteArray();
|
||||
out.writeInt(buf.length);
|
||||
out.write(buf);
|
||||
|
||||
Bytes.writeByteArray(out, Bytes.toBytes(scan));
|
||||
Bytes.writeByteArray(out, Bytes.toBytes(restoreDir));
|
||||
|
||||
}
|
||||
|
||||
@Override
|
||||
|
@ -140,6 +172,9 @@ public class TableSnapshotInputFormatImpl {
|
|||
this.regionInfo = HRegionInfo.convert(split.getRegion());
|
||||
List<String> locationsList = split.getLocationsList();
|
||||
this.locations = locationsList.toArray(new String[locationsList.size()]);
|
||||
|
||||
this.scan = Bytes.toString(Bytes.readByteArray(in));
|
||||
this.restoreDir = Bytes.toString(Bytes.readByteArray(in));
|
||||
}
|
||||
}
|
||||
|
||||
|
@ -158,28 +193,12 @@ public class TableSnapshotInputFormatImpl {
|
|||
}
|
||||
|
||||
public void initialize(InputSplit split, Configuration conf) throws IOException {
|
||||
this.scan = TableMapReduceUtil.convertStringToScan(split.getScan());
|
||||
this.split = split;
|
||||
HTableDescriptor htd = split.htd;
|
||||
HRegionInfo hri = this.split.getRegionInfo();
|
||||
FileSystem fs = FSUtils.getCurrentFileSystem(conf);
|
||||
|
||||
Path tmpRootDir = new Path(conf.get(RESTORE_DIR_KEY)); // This is the user specified root
|
||||
// directory where snapshot was restored
|
||||
|
||||
// create scan
|
||||
// TODO: mapred does not support scan as input API. Work around for now.
|
||||
if (conf.get(TableInputFormat.SCAN) != null) {
|
||||
scan = TableMapReduceUtil.convertStringToScan(conf.get(TableInputFormat.SCAN));
|
||||
} else if (conf.get(org.apache.hadoop.hbase.mapred.TableInputFormat.COLUMN_LIST) != null) {
|
||||
String[] columns =
|
||||
conf.get(org.apache.hadoop.hbase.mapred.TableInputFormat.COLUMN_LIST).split(" ");
|
||||
scan = new Scan();
|
||||
for (String col : columns) {
|
||||
scan.addFamily(Bytes.toBytes(col));
|
||||
}
|
||||
} else {
|
||||
throw new IllegalArgumentException("A Scan is not configured for this job");
|
||||
}
|
||||
|
||||
// region is immutable, this should be fine,
|
||||
// otherwise we have to set the thread read point
|
||||
|
@ -187,7 +206,8 @@ public class TableSnapshotInputFormatImpl {
|
|||
// disable caching of data blocks
|
||||
scan.setCacheBlocks(false);
|
||||
|
||||
scanner = new ClientSideRegionScanner(conf, fs, tmpRootDir, htd, hri, scan, null);
|
||||
scanner =
|
||||
new ClientSideRegionScanner(conf, fs, new Path(split.restoreDir), htd, hri, scan, null);
|
||||
}
|
||||
|
||||
public boolean nextKeyValue() throws IOException {
|
||||
|
@ -233,18 +253,40 @@ public class TableSnapshotInputFormatImpl {
|
|||
Path rootDir = FSUtils.getRootDir(conf);
|
||||
FileSystem fs = rootDir.getFileSystem(conf);
|
||||
|
||||
Path snapshotDir = SnapshotDescriptionUtils.getCompletedSnapshotDir(snapshotName, rootDir);
|
||||
SnapshotDescription snapshotDesc = SnapshotDescriptionUtils.readSnapshotInfo(fs, snapshotDir);
|
||||
SnapshotManifest manifest = SnapshotManifest.open(conf, fs, snapshotDir, snapshotDesc);
|
||||
SnapshotManifest manifest = getSnapshotManifest(conf, snapshotName, rootDir, fs);
|
||||
|
||||
List<HRegionInfo> regionInfos = getRegionInfosFromManifest(manifest);
|
||||
|
||||
// TODO: mapred does not support scan as input API. Work around for now.
|
||||
Scan scan = extractScanFromConf(conf);
|
||||
// the temp dir where the snapshot is restored
|
||||
Path restoreDir = new Path(conf.get(RESTORE_DIR_KEY));
|
||||
|
||||
return getSplits(scan, manifest, regionInfos, restoreDir, conf);
|
||||
}
|
||||
|
||||
public static List<HRegionInfo> getRegionInfosFromManifest(SnapshotManifest manifest) {
|
||||
List<SnapshotRegionManifest> regionManifests = manifest.getRegionManifests();
|
||||
if (regionManifests == null) {
|
||||
throw new IllegalArgumentException("Snapshot seems empty");
|
||||
}
|
||||
|
||||
// load table descriptor
|
||||
HTableDescriptor htd = manifest.getTableDescriptor();
|
||||
List<HRegionInfo> regionInfos = Lists.newArrayListWithCapacity(regionManifests.size());
|
||||
|
||||
// TODO: mapred does not support scan as input API. Work around for now.
|
||||
for (SnapshotRegionManifest regionManifest : regionManifests) {
|
||||
regionInfos.add(HRegionInfo.convert(regionManifest.getRegionInfo()));
|
||||
}
|
||||
return regionInfos;
|
||||
}
|
||||
|
||||
public static SnapshotManifest getSnapshotManifest(Configuration conf, String snapshotName,
|
||||
Path rootDir, FileSystem fs) throws IOException {
|
||||
Path snapshotDir = SnapshotDescriptionUtils.getCompletedSnapshotDir(snapshotName, rootDir);
|
||||
SnapshotDescription snapshotDesc = SnapshotDescriptionUtils.readSnapshotInfo(fs, snapshotDir);
|
||||
return SnapshotManifest.open(conf, fs, snapshotDir, snapshotDesc);
|
||||
}
|
||||
|
||||
public static Scan extractScanFromConf(Configuration conf) throws IOException {
|
||||
Scan scan = null;
|
||||
if (conf.get(TableInputFormat.SCAN) != null) {
|
||||
scan = TableMapReduceUtil.convertStringToScan(conf.get(TableInputFormat.SCAN));
|
||||
|
@ -258,17 +300,22 @@ public class TableSnapshotInputFormatImpl {
|
|||
} else {
|
||||
throw new IllegalArgumentException("Unable to create scan");
|
||||
}
|
||||
// the temp dir where the snapshot is restored
|
||||
Path restoreDir = new Path(conf.get(RESTORE_DIR_KEY));
|
||||
return scan;
|
||||
}
|
||||
|
||||
public static List<InputSplit> getSplits(Scan scan, SnapshotManifest manifest,
|
||||
List<HRegionInfo> regionManifests, Path restoreDir, Configuration conf) throws IOException {
|
||||
// load table descriptor
|
||||
HTableDescriptor htd = manifest.getTableDescriptor();
|
||||
|
||||
Path tableDir = FSUtils.getTableDir(restoreDir, htd.getTableName());
|
||||
|
||||
List<InputSplit> splits = new ArrayList<InputSplit>();
|
||||
for (SnapshotRegionManifest regionManifest : regionManifests) {
|
||||
for (HRegionInfo hri : regionManifests) {
|
||||
// load region descriptor
|
||||
HRegionInfo hri = HRegionInfo.convert(regionManifest.getRegionInfo());
|
||||
|
||||
if (CellUtil.overlappingKeys(scan.getStartRow(), scan.getStopRow(),
|
||||
hri.getStartKey(), hri.getEndKey())) {
|
||||
if (CellUtil.overlappingKeys(scan.getStartRow(), scan.getStopRow(), hri.getStartKey(),
|
||||
hri.getEndKey())) {
|
||||
// compute HDFS locations from snapshot files (which will get the locations for
|
||||
// referred hfiles)
|
||||
List<String> hosts = getBestLocations(conf,
|
||||
|
@ -276,11 +323,12 @@ public class TableSnapshotInputFormatImpl {
|
|||
|
||||
int len = Math.min(3, hosts.size());
|
||||
hosts = hosts.subList(0, len);
|
||||
splits.add(new InputSplit(htd, hri, hosts));
|
||||
splits.add(new InputSplit(htd, hri, hosts, scan, restoreDir));
|
||||
}
|
||||
}
|
||||
|
||||
return splits;
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
|
|
|
@ -0,0 +1,125 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase.util;
|
||||
|
||||
import com.google.common.collect.Lists;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceAudience;
|
||||
import org.apache.hadoop.hbase.classification.InterfaceStability;
|
||||
import org.apache.hadoop.util.StringUtils;
|
||||
|
||||
import java.util.AbstractMap;
|
||||
import java.util.Collection;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
|
||||
/**
|
||||
* Utilities for storing more complex collection types in
|
||||
* {@link org.apache.hadoop.conf.Configuration} instances.
|
||||
*/
|
||||
@InterfaceAudience.Public
|
||||
@InterfaceStability.Evolving
|
||||
public final class ConfigurationUtil {
|
||||
// TODO: hopefully this is a good delimiter; it's not in the base64 alphabet,
|
||||
// nor is it valid for paths
|
||||
public static final char KVP_DELIMITER = '^';
|
||||
|
||||
// Disallow instantiation
|
||||
private ConfigurationUtil() {
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Store a collection of Map.Entry's in conf, with each entry separated by ','
|
||||
* and key values delimited by {@link #KVP_DELIMITER}
|
||||
*
|
||||
* @param conf configuration to store the collection in
|
||||
* @param key overall key to store keyValues under
|
||||
* @param keyValues kvps to be stored under key in conf
|
||||
*/
|
||||
public static void setKeyValues(Configuration conf, String key,
|
||||
Collection<Map.Entry<String, String>> keyValues) {
|
||||
setKeyValues(conf, key, keyValues, KVP_DELIMITER);
|
||||
}
|
||||
|
||||
/**
|
||||
* Store a collection of Map.Entry's in conf, with each entry separated by ','
|
||||
* and key values delimited by delimiter.
|
||||
*
|
||||
* @param conf configuration to store the collection in
|
||||
* @param key overall key to store keyValues under
|
||||
* @param keyValues kvps to be stored under key in conf
|
||||
* @param delimiter character used to separate each kvp
|
||||
*/
|
||||
public static void setKeyValues(Configuration conf, String key,
|
||||
Collection<Map.Entry<String, String>> keyValues, char delimiter) {
|
||||
List<String> serializedKvps = Lists.newArrayList();
|
||||
|
||||
for (Map.Entry<String, String> kvp : keyValues) {
|
||||
serializedKvps.add(kvp.getKey() + delimiter + kvp.getValue());
|
||||
}
|
||||
|
||||
conf.setStrings(key, serializedKvps.toArray(new String[serializedKvps.size()]));
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve a list of key value pairs from configuration, stored under the provided key
|
||||
*
|
||||
* @param conf configuration to retrieve kvps from
|
||||
* @param key key under which the key values are stored
|
||||
* @return the list of kvps stored under key in conf, or null if the key isn't present.
|
||||
* @see #setKeyValues(Configuration, String, Collection, char)
|
||||
*/
|
||||
public static List<Map.Entry<String, String>> getKeyValues(Configuration conf, String key) {
|
||||
return getKeyValues(conf, key, KVP_DELIMITER);
|
||||
}
|
||||
|
||||
/**
|
||||
* Retrieve a list of key value pairs from configuration, stored under the provided key
|
||||
*
|
||||
* @param conf configuration to retrieve kvps from
|
||||
* @param key key under which the key values are stored
|
||||
* @param delimiter character used to separate each kvp
|
||||
* @return the list of kvps stored under key in conf, or null if the key isn't present.
|
||||
* @see #setKeyValues(Configuration, String, Collection, char)
|
||||
*/
|
||||
public static List<Map.Entry<String, String>> getKeyValues(Configuration conf, String key,
|
||||
char delimiter) {
|
||||
String[] kvps = conf.getStrings(key);
|
||||
|
||||
if (kvps == null) {
|
||||
return null;
|
||||
}
|
||||
|
||||
List<Map.Entry<String, String>> rtn = Lists.newArrayList();
|
||||
|
||||
for (String kvp : kvps) {
|
||||
String[] splitKvp = StringUtils.split(kvp, delimiter);
|
||||
|
||||
if (splitKvp.length != 2) {
|
||||
throw new IllegalArgumentException(
|
||||
"Expected key value pair for configuration key '" + key + "'" + " to be of form '<key>"
|
||||
+ delimiter + "<value>; was " + kvp + " instead");
|
||||
}
|
||||
|
||||
rtn.add(new AbstractMap.SimpleImmutableEntry<>(splitKvp[0], splitKvp[1]));
|
||||
}
|
||||
return rtn;
|
||||
}
|
||||
}
|
|
@ -0,0 +1,135 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase.mapred;
|
||||
|
||||
import com.google.common.collect.Lists;
|
||||
import org.apache.commons.logging.Log;
|
||||
import org.apache.commons.logging.LogFactory;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
import org.apache.hadoop.hbase.client.Result;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
||||
import org.apache.hadoop.hbase.testclassification.LargeTests;
|
||||
import org.apache.hadoop.hbase.testclassification.VerySlowMapReduceTests;
|
||||
import org.apache.hadoop.io.NullWritable;
|
||||
import org.apache.hadoop.mapred.FileOutputFormat;
|
||||
import org.apache.hadoop.mapred.JobClient;
|
||||
import org.apache.hadoop.mapred.JobConf;
|
||||
import org.apache.hadoop.mapred.OutputCollector;
|
||||
import org.apache.hadoop.mapred.Reporter;
|
||||
import org.apache.hadoop.mapred.RunningJob;
|
||||
import org.junit.experimental.categories.Category;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.Iterator;
|
||||
import java.util.List;
|
||||
|
||||
import static org.junit.Assert.assertTrue;
|
||||
|
||||
@Category({ VerySlowMapReduceTests.class, LargeTests.class })
|
||||
public class TestMultiTableSnapshotInputFormat
|
||||
extends org.apache.hadoop.hbase.mapreduce.TestMultiTableSnapshotInputFormat {
|
||||
|
||||
private static final Log LOG = LogFactory.getLog(TestMultiTableSnapshotInputFormat.class);
|
||||
|
||||
@Override
|
||||
protected void runJob(String jobName, Configuration c, List<Scan> scans)
|
||||
throws IOException, InterruptedException, ClassNotFoundException {
|
||||
JobConf job = new JobConf(TEST_UTIL.getConfiguration());
|
||||
|
||||
job.setJobName(jobName);
|
||||
job.setMapperClass(Mapper.class);
|
||||
job.setReducerClass(Reducer.class);
|
||||
|
||||
TableMapReduceUtil.initMultiTableSnapshotMapperJob(getSnapshotScanMapping(scans), Mapper.class,
|
||||
ImmutableBytesWritable.class, ImmutableBytesWritable.class, job, true, restoreDir);
|
||||
|
||||
TableMapReduceUtil.addDependencyJars(job);
|
||||
|
||||
job.setReducerClass(Reducer.class);
|
||||
job.setNumReduceTasks(1); // one to get final "first" and "last" key
|
||||
FileOutputFormat.setOutputPath(job, new Path(job.getJobName()));
|
||||
LOG.info("Started " + job.getJobName());
|
||||
|
||||
RunningJob runningJob = JobClient.runJob(job);
|
||||
runningJob.waitForCompletion();
|
||||
assertTrue(runningJob.isSuccessful());
|
||||
LOG.info("After map/reduce completion - job " + jobName);
|
||||
}
|
||||
|
||||
public static class Mapper extends TestMultiTableSnapshotInputFormat.ScanMapper
|
||||
implements TableMap<ImmutableBytesWritable, ImmutableBytesWritable> {
|
||||
|
||||
@Override
|
||||
public void map(ImmutableBytesWritable key, Result value,
|
||||
OutputCollector<ImmutableBytesWritable, ImmutableBytesWritable> outputCollector,
|
||||
Reporter reporter) throws IOException {
|
||||
makeAssertions(key, value);
|
||||
outputCollector.collect(key, key);
|
||||
}
|
||||
|
||||
/**
|
||||
* Closes this stream and releases any system resources associated
|
||||
* with it. If the stream is already closed then invoking this
|
||||
* method has no effect.
|
||||
*
|
||||
* @throws IOException if an I/O error occurs
|
||||
*/
|
||||
@Override
|
||||
public void close() throws IOException {
|
||||
}
|
||||
|
||||
@Override
|
||||
public void configure(JobConf jobConf) {
|
||||
|
||||
}
|
||||
}
|
||||
|
||||
public static class Reducer extends TestMultiTableSnapshotInputFormat.ScanReducer implements
|
||||
org.apache.hadoop.mapred.Reducer<ImmutableBytesWritable, ImmutableBytesWritable,
|
||||
NullWritable, NullWritable> {
|
||||
|
||||
private JobConf jobConf;
|
||||
|
||||
@Override
|
||||
public void reduce(ImmutableBytesWritable key, Iterator<ImmutableBytesWritable> values,
|
||||
OutputCollector<NullWritable, NullWritable> outputCollector, Reporter reporter)
|
||||
throws IOException {
|
||||
makeAssertions(key, Lists.newArrayList(values));
|
||||
}
|
||||
|
||||
/**
|
||||
* Closes this stream and releases any system resources associated
|
||||
* with it. If the stream is already closed then invoking this
|
||||
* method has no effect.
|
||||
*
|
||||
* @throws IOException if an I/O error occurs
|
||||
*/
|
||||
@Override
|
||||
public void close() throws IOException {
|
||||
super.cleanup(this.jobConf);
|
||||
}
|
||||
|
||||
@Override
|
||||
public void configure(JobConf jobConf) {
|
||||
this.jobConf = jobConf;
|
||||
}
|
||||
}
|
||||
}
|
|
@ -0,0 +1,274 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import com.google.common.collect.Lists;
|
||||
import org.apache.commons.logging.Log;
|
||||
import org.apache.commons.logging.LogFactory;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.fs.FileUtil;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
import org.apache.hadoop.hbase.HBaseTestingUtility;
|
||||
import org.apache.hadoop.hbase.TableName;
|
||||
import org.apache.hadoop.hbase.client.HTable;
|
||||
import org.apache.hadoop.hbase.client.Result;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
||||
import org.apache.hadoop.hbase.util.Bytes;
|
||||
import org.apache.hadoop.io.NullWritable;
|
||||
import org.apache.hadoop.mapreduce.Job;
|
||||
import org.apache.hadoop.mapreduce.Reducer;
|
||||
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
|
||||
import org.junit.After;
|
||||
import org.junit.AfterClass;
|
||||
import org.junit.BeforeClass;
|
||||
import org.junit.Test;
|
||||
|
||||
import java.io.File;
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.NavigableMap;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertTrue;
|
||||
|
||||
/**
|
||||
* Base set of tests and setup for input formats touching multiple tables.
|
||||
*/
|
||||
public abstract class MultiTableInputFormatTestBase {
|
||||
static final Log LOG = LogFactory.getLog(TestMultiTableInputFormat.class);
|
||||
public static final HBaseTestingUtility TEST_UTIL = new HBaseTestingUtility();
|
||||
static final String TABLE_NAME = "scantest";
|
||||
static final byte[] INPUT_FAMILY = Bytes.toBytes("contents");
|
||||
static final String KEY_STARTROW = "startRow";
|
||||
static final String KEY_LASTROW = "stpRow";
|
||||
|
||||
static List<String> TABLES = Lists.newArrayList();
|
||||
|
||||
static {
|
||||
for (int i = 0; i < 3; i++) {
|
||||
TABLES.add(TABLE_NAME + String.valueOf(i));
|
||||
}
|
||||
}
|
||||
|
||||
@BeforeClass
|
||||
public static void setUpBeforeClass() throws Exception {
|
||||
// switch TIF to log at DEBUG level
|
||||
TEST_UTIL.enableDebug(MultiTableInputFormatBase.class);
|
||||
// start mini hbase cluster
|
||||
TEST_UTIL.startMiniCluster(3);
|
||||
// create and fill table
|
||||
for (String tableName : TABLES) {
|
||||
try (HTable table =
|
||||
TEST_UTIL.createMultiRegionTable(TableName.valueOf(tableName),
|
||||
INPUT_FAMILY, 4)) {
|
||||
TEST_UTIL.loadTable(table, INPUT_FAMILY, false);
|
||||
}
|
||||
}
|
||||
// start MR cluster
|
||||
TEST_UTIL.startMiniMapReduceCluster();
|
||||
}
|
||||
|
||||
@AfterClass
|
||||
public static void tearDownAfterClass() throws Exception {
|
||||
TEST_UTIL.shutdownMiniMapReduceCluster();
|
||||
TEST_UTIL.shutdownMiniCluster();
|
||||
}
|
||||
|
||||
@After
|
||||
public void tearDown() throws Exception {
|
||||
Configuration c = TEST_UTIL.getConfiguration();
|
||||
FileUtil.fullyDelete(new File(c.get("hadoop.tmp.dir")));
|
||||
}
|
||||
|
||||
/**
|
||||
* Pass the key and value to reducer.
|
||||
*/
|
||||
public static class ScanMapper extends
|
||||
TableMapper<ImmutableBytesWritable, ImmutableBytesWritable> {
|
||||
/**
|
||||
* Pass the key and value to reduce.
|
||||
*
|
||||
* @param key The key, here "aaa", "aab" etc.
|
||||
* @param value The value is the same as the key.
|
||||
* @param context The task context.
|
||||
* @throws IOException When reading the rows fails.
|
||||
*/
|
||||
@Override
|
||||
public void map(ImmutableBytesWritable key, Result value, Context context)
|
||||
throws IOException, InterruptedException {
|
||||
makeAssertions(key, value);
|
||||
context.write(key, key);
|
||||
}
|
||||
|
||||
public void makeAssertions(ImmutableBytesWritable key, Result value) throws IOException {
|
||||
if (value.size() != 1) {
|
||||
throw new IOException("There should only be one input column");
|
||||
}
|
||||
Map<byte[], NavigableMap<byte[], NavigableMap<Long, byte[]>>> cf =
|
||||
value.getMap();
|
||||
if (!cf.containsKey(INPUT_FAMILY)) {
|
||||
throw new IOException("Wrong input columns. Missing: '" +
|
||||
Bytes.toString(INPUT_FAMILY) + "'.");
|
||||
}
|
||||
String val = Bytes.toStringBinary(value.getValue(INPUT_FAMILY, null));
|
||||
LOG.debug("map: key -> " + Bytes.toStringBinary(key.get()) +
|
||||
", value -> " + val);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Checks the last and first keys seen against the scanner boundaries.
|
||||
*/
|
||||
public static class ScanReducer
|
||||
extends
|
||||
Reducer<ImmutableBytesWritable, ImmutableBytesWritable,
|
||||
NullWritable, NullWritable> {
|
||||
private String first = null;
|
||||
private String last = null;
|
||||
|
||||
@Override
|
||||
protected void reduce(ImmutableBytesWritable key,
|
||||
Iterable<ImmutableBytesWritable> values, Context context)
|
||||
throws IOException, InterruptedException {
|
||||
makeAssertions(key, values);
|
||||
}
|
||||
|
||||
protected void makeAssertions(ImmutableBytesWritable key,
|
||||
Iterable<ImmutableBytesWritable> values) {
|
||||
int count = 0;
|
||||
for (ImmutableBytesWritable value : values) {
|
||||
String val = Bytes.toStringBinary(value.get());
|
||||
LOG.debug("reduce: key[" + count + "] -> " +
|
||||
Bytes.toStringBinary(key.get()) + ", value -> " + val);
|
||||
if (first == null) first = val;
|
||||
last = val;
|
||||
count++;
|
||||
}
|
||||
assertEquals(3, count);
|
||||
}
|
||||
|
||||
@Override
|
||||
protected void cleanup(Context context) throws IOException,
|
||||
InterruptedException {
|
||||
Configuration c = context.getConfiguration();
|
||||
cleanup(c);
|
||||
}
|
||||
|
||||
protected void cleanup(Configuration c) {
|
||||
String startRow = c.get(KEY_STARTROW);
|
||||
String lastRow = c.get(KEY_LASTROW);
|
||||
LOG.info("cleanup: first -> \"" + first + "\", start row -> \"" +
|
||||
startRow + "\"");
|
||||
LOG.info("cleanup: last -> \"" + last + "\", last row -> \"" + lastRow +
|
||||
"\"");
|
||||
if (startRow != null && startRow.length() > 0) {
|
||||
assertEquals(startRow, first);
|
||||
}
|
||||
if (lastRow != null && lastRow.length() > 0) {
|
||||
assertEquals(lastRow, last);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanEmptyToEmpty() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan(null, null, null);
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanEmptyToAPP() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan(null, "app", "apo");
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanOBBToOPP() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan("obb", "opp", "opo");
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanYZYToEmpty() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan("yzy", null, "zzz");
|
||||
}
|
||||
|
||||
/**
|
||||
* Tests a MR scan using specific start and stop rows.
|
||||
*
|
||||
* @throws IOException
|
||||
* @throws ClassNotFoundException
|
||||
* @throws InterruptedException
|
||||
*/
|
||||
private void testScan(String start, String stop, String last)
|
||||
throws IOException, InterruptedException, ClassNotFoundException {
|
||||
String jobName =
|
||||
"Scan" + (start != null ? start.toUpperCase() : "Empty") + "To" +
|
||||
(stop != null ? stop.toUpperCase() : "Empty");
|
||||
LOG.info("Before map/reduce startup - job " + jobName);
|
||||
Configuration c = new Configuration(TEST_UTIL.getConfiguration());
|
||||
|
||||
c.set(KEY_STARTROW, start != null ? start : "");
|
||||
c.set(KEY_LASTROW, last != null ? last : "");
|
||||
|
||||
List<Scan> scans = new ArrayList<Scan>();
|
||||
|
||||
for (String tableName : TABLES) {
|
||||
Scan scan = new Scan();
|
||||
|
||||
scan.addFamily(INPUT_FAMILY);
|
||||
scan.setAttribute(Scan.SCAN_ATTRIBUTES_TABLE_NAME, Bytes.toBytes(tableName));
|
||||
|
||||
if (start != null) {
|
||||
scan.setStartRow(Bytes.toBytes(start));
|
||||
}
|
||||
if (stop != null) {
|
||||
scan.setStopRow(Bytes.toBytes(stop));
|
||||
}
|
||||
|
||||
scans.add(scan);
|
||||
|
||||
LOG.info("scan before: " + scan);
|
||||
}
|
||||
|
||||
runJob(jobName, c, scans);
|
||||
}
|
||||
|
||||
protected void runJob(String jobName, Configuration c, List<Scan> scans)
|
||||
throws IOException, InterruptedException, ClassNotFoundException {
|
||||
Job job = new Job(c, jobName);
|
||||
|
||||
initJob(scans, job);
|
||||
job.setReducerClass(ScanReducer.class);
|
||||
job.setNumReduceTasks(1); // one to get final "first" and "last" key
|
||||
FileOutputFormat.setOutputPath(job, new Path(job.getJobName()));
|
||||
LOG.info("Started " + job.getJobName());
|
||||
job.waitForCompletion(true);
|
||||
assertTrue(job.isSuccessful());
|
||||
LOG.info("After map/reduce completion - job " + jobName);
|
||||
}
|
||||
|
||||
protected abstract void initJob(List<Scan> scans, Job job) throws IOException;
|
||||
|
||||
|
||||
}
|
|
@ -17,236 +17,34 @@
|
|||
*/
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertTrue;
|
||||
|
||||
import java.io.File;
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.NavigableMap;
|
||||
|
||||
import org.apache.commons.logging.Log;
|
||||
import org.apache.commons.logging.LogFactory;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.fs.FileUtil;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
import org.apache.hadoop.hbase.HBaseTestingUtility;
|
||||
import org.apache.hadoop.hbase.TableName;
|
||||
import org.apache.hadoop.hbase.client.HTable;
|
||||
import org.apache.hadoop.hbase.client.Result;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
||||
import org.apache.hadoop.hbase.testclassification.LargeTests;
|
||||
import org.apache.hadoop.hbase.testclassification.VerySlowMapReduceTests;
|
||||
import org.apache.hadoop.hbase.util.Bytes;
|
||||
import org.apache.hadoop.io.NullWritable;
|
||||
import org.apache.hadoop.mapreduce.Job;
|
||||
import org.apache.hadoop.mapreduce.Reducer;
|
||||
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
|
||||
import org.junit.After;
|
||||
import org.junit.AfterClass;
|
||||
import org.junit.BeforeClass;
|
||||
import org.junit.Test;
|
||||
import org.junit.experimental.categories.Category;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.List;
|
||||
|
||||
/**
|
||||
* Tests various scan start and stop row scenarios. This is set in a scan and
|
||||
* tested in a MapReduce job to see if that is handed over and done properly
|
||||
* too.
|
||||
*/
|
||||
@Category({VerySlowMapReduceTests.class, LargeTests.class})
|
||||
public class TestMultiTableInputFormat {
|
||||
|
||||
private static final Log LOG = LogFactory.getLog(TestMultiTableInputFormat.class);
|
||||
static final HBaseTestingUtility TEST_UTIL = new HBaseTestingUtility();
|
||||
|
||||
static final String TABLE_NAME = "scantest";
|
||||
static final byte[] INPUT_FAMILY = Bytes.toBytes("contents");
|
||||
static final String KEY_STARTROW = "startRow";
|
||||
static final String KEY_LASTROW = "stpRow";
|
||||
public class TestMultiTableInputFormat extends MultiTableInputFormatTestBase {
|
||||
|
||||
@BeforeClass
|
||||
public static void setUpBeforeClass() throws Exception {
|
||||
// switch TIF to log at DEBUG level
|
||||
public static void setupLogging() {
|
||||
TEST_UTIL.enableDebug(MultiTableInputFormat.class);
|
||||
TEST_UTIL.enableDebug(MultiTableInputFormatBase.class);
|
||||
// start mini hbase cluster
|
||||
TEST_UTIL.startMiniCluster(3);
|
||||
// create and fill table
|
||||
for (int i = 0; i < 3; i++) {
|
||||
try (HTable table =
|
||||
TEST_UTIL.createMultiRegionTable(TableName.valueOf(TABLE_NAME + String.valueOf(i)),
|
||||
INPUT_FAMILY, 4)) {
|
||||
TEST_UTIL.loadTable(table, INPUT_FAMILY, false);
|
||||
}
|
||||
}
|
||||
// start MR cluster
|
||||
TEST_UTIL.startMiniMapReduceCluster();
|
||||
}
|
||||
|
||||
@AfterClass
|
||||
public static void tearDownAfterClass() throws Exception {
|
||||
TEST_UTIL.shutdownMiniMapReduceCluster();
|
||||
TEST_UTIL.shutdownMiniCluster();
|
||||
}
|
||||
|
||||
@After
|
||||
public void tearDown() throws Exception {
|
||||
Configuration c = TEST_UTIL.getConfiguration();
|
||||
FileUtil.fullyDelete(new File(c.get("hadoop.tmp.dir")));
|
||||
}
|
||||
|
||||
/**
|
||||
* Pass the key and value to reducer.
|
||||
*/
|
||||
public static class ScanMapper extends
|
||||
TableMapper<ImmutableBytesWritable, ImmutableBytesWritable> {
|
||||
/**
|
||||
* Pass the key and value to reduce.
|
||||
*
|
||||
* @param key The key, here "aaa", "aab" etc.
|
||||
* @param value The value is the same as the key.
|
||||
* @param context The task context.
|
||||
* @throws IOException When reading the rows fails.
|
||||
*/
|
||||
@Override
|
||||
public void map(ImmutableBytesWritable key, Result value, Context context)
|
||||
throws IOException, InterruptedException {
|
||||
if (value.size() != 1) {
|
||||
throw new IOException("There should only be one input column");
|
||||
}
|
||||
Map<byte[], NavigableMap<byte[], NavigableMap<Long, byte[]>>> cf =
|
||||
value.getMap();
|
||||
if (!cf.containsKey(INPUT_FAMILY)) {
|
||||
throw new IOException("Wrong input columns. Missing: '" +
|
||||
Bytes.toString(INPUT_FAMILY) + "'.");
|
||||
}
|
||||
String val = Bytes.toStringBinary(value.getValue(INPUT_FAMILY, null));
|
||||
LOG.debug("map: key -> " + Bytes.toStringBinary(key.get()) +
|
||||
", value -> " + val);
|
||||
context.write(key, key);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Checks the last and first keys seen against the scanner boundaries.
|
||||
*/
|
||||
public static class ScanReducer
|
||||
extends
|
||||
Reducer<ImmutableBytesWritable, ImmutableBytesWritable,
|
||||
NullWritable, NullWritable> {
|
||||
private String first = null;
|
||||
private String last = null;
|
||||
|
||||
@Override
|
||||
protected void reduce(ImmutableBytesWritable key,
|
||||
Iterable<ImmutableBytesWritable> values, Context context)
|
||||
throws IOException, InterruptedException {
|
||||
int count = 0;
|
||||
for (ImmutableBytesWritable value : values) {
|
||||
String val = Bytes.toStringBinary(value.get());
|
||||
LOG.debug("reduce: key[" + count + "] -> " +
|
||||
Bytes.toStringBinary(key.get()) + ", value -> " + val);
|
||||
if (first == null) first = val;
|
||||
last = val;
|
||||
count++;
|
||||
}
|
||||
assertEquals(3, count);
|
||||
}
|
||||
|
||||
@Override
|
||||
protected void cleanup(Context context) throws IOException,
|
||||
InterruptedException {
|
||||
Configuration c = context.getConfiguration();
|
||||
String startRow = c.get(KEY_STARTROW);
|
||||
String lastRow = c.get(KEY_LASTROW);
|
||||
LOG.info("cleanup: first -> \"" + first + "\", start row -> \"" +
|
||||
startRow + "\"");
|
||||
LOG.info("cleanup: last -> \"" + last + "\", last row -> \"" + lastRow +
|
||||
"\"");
|
||||
if (startRow != null && startRow.length() > 0) {
|
||||
assertEquals(startRow, first);
|
||||
}
|
||||
if (lastRow != null && lastRow.length() > 0) {
|
||||
assertEquals(lastRow, last);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanEmptyToEmpty() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan(null, null, null);
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanEmptyToAPP() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan(null, "app", "apo");
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanOBBToOPP() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan("obb", "opp", "opo");
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testScanYZYToEmpty() throws IOException, InterruptedException,
|
||||
ClassNotFoundException {
|
||||
testScan("yzy", null, "zzz");
|
||||
}
|
||||
|
||||
/**
|
||||
* Tests a MR scan using specific start and stop rows.
|
||||
*
|
||||
* @throws IOException
|
||||
* @throws ClassNotFoundException
|
||||
* @throws InterruptedException
|
||||
*/
|
||||
private void testScan(String start, String stop, String last)
|
||||
throws IOException, InterruptedException, ClassNotFoundException {
|
||||
String jobName =
|
||||
"Scan" + (start != null ? start.toUpperCase() : "Empty") + "To" +
|
||||
(stop != null ? stop.toUpperCase() : "Empty");
|
||||
LOG.info("Before map/reduce startup - job " + jobName);
|
||||
Configuration c = new Configuration(TEST_UTIL.getConfiguration());
|
||||
|
||||
c.set(KEY_STARTROW, start != null ? start : "");
|
||||
c.set(KEY_LASTROW, last != null ? last : "");
|
||||
|
||||
List<Scan> scans = new ArrayList<Scan>();
|
||||
|
||||
for(int i=0; i<3; i++){
|
||||
Scan scan = new Scan();
|
||||
|
||||
scan.addFamily(INPUT_FAMILY);
|
||||
scan.setAttribute(Scan.SCAN_ATTRIBUTES_TABLE_NAME, Bytes.toBytes(TABLE_NAME + i));
|
||||
|
||||
if (start != null) {
|
||||
scan.setStartRow(Bytes.toBytes(start));
|
||||
}
|
||||
if (stop != null) {
|
||||
scan.setStopRow(Bytes.toBytes(stop));
|
||||
}
|
||||
|
||||
scans.add(scan);
|
||||
|
||||
LOG.info("scan before: " + scan);
|
||||
}
|
||||
|
||||
Job job = new Job(c, jobName);
|
||||
|
||||
protected void initJob(List<Scan> scans, Job job) throws IOException {
|
||||
TableMapReduceUtil.initTableMapperJob(scans, ScanMapper.class,
|
||||
ImmutableBytesWritable.class, ImmutableBytesWritable.class, job);
|
||||
job.setReducerClass(ScanReducer.class);
|
||||
job.setNumReduceTasks(1); // one to get final "first" and "last" key
|
||||
FileOutputFormat.setOutputPath(job, new Path(job.getJobName()));
|
||||
LOG.info("Started " + job.getJobName());
|
||||
job.waitForCompletion(true);
|
||||
assertTrue(job.isSuccessful());
|
||||
LOG.info("After map/reduce completion - job " + jobName);
|
||||
}
|
||||
}
|
||||
|
|
|
@ -0,0 +1,93 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import com.google.common.base.Function;
|
||||
import com.google.common.collect.ImmutableList;
|
||||
import com.google.common.collect.Multimaps;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
import org.apache.hadoop.hbase.TableName;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
||||
import org.apache.hadoop.hbase.snapshot.SnapshotTestingUtils;
|
||||
import org.apache.hadoop.hbase.testclassification.LargeTests;
|
||||
import org.apache.hadoop.hbase.testclassification.VerySlowMapReduceTests;
|
||||
import org.apache.hadoop.hbase.util.Bytes;
|
||||
import org.apache.hadoop.hbase.util.FSUtils;
|
||||
import org.apache.hadoop.mapreduce.Job;
|
||||
import org.junit.Before;
|
||||
import org.junit.BeforeClass;
|
||||
import org.junit.experimental.categories.Category;
|
||||
|
||||
import javax.annotation.Nullable;
|
||||
import java.io.IOException;
|
||||
import java.util.Collection;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
|
||||
@Category({ VerySlowMapReduceTests.class, LargeTests.class })
|
||||
public class TestMultiTableSnapshotInputFormat extends MultiTableInputFormatTestBase {
|
||||
|
||||
protected Path restoreDir;
|
||||
|
||||
@BeforeClass
|
||||
public static void setUpSnapshots() throws Exception {
|
||||
|
||||
TEST_UTIL.enableDebug(MultiTableSnapshotInputFormat.class);
|
||||
TEST_UTIL.enableDebug(MultiTableSnapshotInputFormatImpl.class);
|
||||
|
||||
// take a snapshot of every table we have.
|
||||
for (String tableName : TABLES) {
|
||||
SnapshotTestingUtils
|
||||
.createSnapshotAndValidate(TEST_UTIL.getHBaseAdmin(), TableName.valueOf(tableName),
|
||||
ImmutableList.of(MultiTableInputFormatTestBase.INPUT_FAMILY), null,
|
||||
snapshotNameForTable(tableName), FSUtils.getRootDir(TEST_UTIL.getConfiguration()),
|
||||
TEST_UTIL.getTestFileSystem(), true);
|
||||
}
|
||||
}
|
||||
|
||||
@Before
|
||||
public void setUp() throws Exception {
|
||||
this.restoreDir = new Path("/tmp");
|
||||
|
||||
}
|
||||
|
||||
@Override
|
||||
protected void initJob(List<Scan> scans, Job job) throws IOException {
|
||||
TableMapReduceUtil
|
||||
.initMultiTableSnapshotMapperJob(getSnapshotScanMapping(scans), ScanMapper.class,
|
||||
ImmutableBytesWritable.class, ImmutableBytesWritable.class, job, true, restoreDir);
|
||||
}
|
||||
|
||||
protected Map<String, Collection<Scan>> getSnapshotScanMapping(final List<Scan> scans) {
|
||||
return Multimaps.index(scans, new Function<Scan, String>() {
|
||||
@Nullable
|
||||
@Override
|
||||
public String apply(Scan input) {
|
||||
return snapshotNameForTable(
|
||||
Bytes.toStringBinary(input.getAttribute(Scan.SCAN_ATTRIBUTES_TABLE_NAME)));
|
||||
}
|
||||
}).asMap();
|
||||
}
|
||||
|
||||
public static String snapshotNameForTable(String tableName) {
|
||||
return tableName + "_snapshot";
|
||||
}
|
||||
|
||||
}
|
|
@ -0,0 +1,185 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase.mapreduce;
|
||||
|
||||
import com.google.common.collect.ImmutableList;
|
||||
import com.google.common.collect.ImmutableMap;
|
||||
import com.google.common.collect.Lists;
|
||||
import com.google.common.collect.Maps;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.fs.FileSystem;
|
||||
import org.apache.hadoop.fs.Path;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.testclassification.SmallTests;
|
||||
import org.apache.hadoop.hbase.util.Bytes;
|
||||
import org.apache.hadoop.hbase.util.FSUtils;
|
||||
import org.junit.Before;
|
||||
import org.junit.Test;
|
||||
import org.junit.experimental.categories.Category;
|
||||
import org.mockito.Mockito;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.Collection;
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.Objects;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.mockito.Matchers.any;
|
||||
import static org.mockito.Matchers.eq;
|
||||
import static org.mockito.Mockito.doNothing;
|
||||
import static org.mockito.Mockito.verify;
|
||||
|
||||
@Category({ SmallTests.class })
|
||||
public class TestMultiTableSnapshotInputFormatImpl {
|
||||
|
||||
private MultiTableSnapshotInputFormatImpl subject;
|
||||
private Map<String, Collection<Scan>> snapshotScans;
|
||||
private Path restoreDir;
|
||||
private Configuration conf;
|
||||
private Path rootDir;
|
||||
|
||||
@Before
|
||||
public void setUp() throws Exception {
|
||||
this.subject = Mockito.spy(new MultiTableSnapshotInputFormatImpl());
|
||||
|
||||
// mock out restoreSnapshot
|
||||
// TODO: this is kind of meh; it'd be much nicer to just inject the RestoreSnapshotHelper
|
||||
// dependency into the
|
||||
// input format. However, we need a new RestoreSnapshotHelper per snapshot in the current
|
||||
// design, and it *also*
|
||||
// feels weird to introduce a RestoreSnapshotHelperFactory and inject that, which would
|
||||
// probably be the more "pure"
|
||||
// way of doing things. This is the lesser of two evils, perhaps?
|
||||
doNothing().when(this.subject).
|
||||
restoreSnapshot(any(Configuration.class), any(String.class), any(Path.class),
|
||||
any(Path.class), any(FileSystem.class));
|
||||
|
||||
this.conf = new Configuration();
|
||||
this.rootDir = new Path("file:///test-root-dir");
|
||||
FSUtils.setRootDir(conf, rootDir);
|
||||
this.snapshotScans = ImmutableMap.<String, Collection<Scan>>of("snapshot1",
|
||||
ImmutableList.of(new Scan(Bytes.toBytes("1"), Bytes.toBytes("2"))), "snapshot2",
|
||||
ImmutableList.of(new Scan(Bytes.toBytes("3"), Bytes.toBytes("4")),
|
||||
new Scan(Bytes.toBytes("5"), Bytes.toBytes("6"))));
|
||||
|
||||
this.restoreDir = new Path(FSUtils.getRootDir(conf), "restore-dir");
|
||||
|
||||
}
|
||||
|
||||
public void callSetInput() throws IOException {
|
||||
subject.setInput(this.conf, snapshotScans, restoreDir);
|
||||
}
|
||||
|
||||
public Map<String, Collection<ScanWithEquals>> toScanWithEquals(
|
||||
Map<String, Collection<Scan>> snapshotScans) throws IOException {
|
||||
Map<String, Collection<ScanWithEquals>> rtn = Maps.newHashMap();
|
||||
|
||||
for (Map.Entry<String, Collection<Scan>> entry : snapshotScans.entrySet()) {
|
||||
List<ScanWithEquals> scans = Lists.newArrayList();
|
||||
|
||||
for (Scan scan : entry.getValue()) {
|
||||
scans.add(new ScanWithEquals(scan));
|
||||
}
|
||||
rtn.put(entry.getKey(), scans);
|
||||
}
|
||||
|
||||
return rtn;
|
||||
}
|
||||
|
||||
public static class ScanWithEquals {
|
||||
|
||||
private final String startRow;
|
||||
private final String stopRow;
|
||||
|
||||
/**
|
||||
* Creates a new instance of this class while copying all values.
|
||||
*
|
||||
* @param scan The scan instance to copy from.
|
||||
* @throws java.io.IOException When copying the values fails.
|
||||
*/
|
||||
public ScanWithEquals(Scan scan) throws IOException {
|
||||
this.startRow = Bytes.toStringBinary(scan.getStartRow());
|
||||
this.stopRow = Bytes.toStringBinary(scan.getStopRow());
|
||||
}
|
||||
|
||||
@Override
|
||||
public boolean equals(Object obj) {
|
||||
if (!(obj instanceof ScanWithEquals)) {
|
||||
return false;
|
||||
}
|
||||
ScanWithEquals otherScan = (ScanWithEquals) obj;
|
||||
return Objects.equals(this.startRow, otherScan.startRow) && Objects
|
||||
.equals(this.stopRow, otherScan.stopRow);
|
||||
}
|
||||
|
||||
@Override
|
||||
public String toString() {
|
||||
return com.google.common.base.Objects.toStringHelper(this).add("startRow", startRow)
|
||||
.add("stopRow", stopRow).toString();
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testSetInputSetsSnapshotToScans() throws Exception {
|
||||
|
||||
callSetInput();
|
||||
|
||||
Map<String, Collection<Scan>> actual = subject.getSnapshotsToScans(conf);
|
||||
|
||||
// convert to scans we can use .equals on
|
||||
Map<String, Collection<ScanWithEquals>> actualWithEquals = toScanWithEquals(actual);
|
||||
Map<String, Collection<ScanWithEquals>> expectedWithEquals = toScanWithEquals(snapshotScans);
|
||||
|
||||
assertEquals(expectedWithEquals, actualWithEquals);
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testSetInputPushesRestoreDirectories() throws Exception {
|
||||
callSetInput();
|
||||
|
||||
Map<String, Path> restoreDirs = subject.getSnapshotDirs(conf);
|
||||
|
||||
assertEquals(this.snapshotScans.keySet(), restoreDirs.keySet());
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testSetInputCreatesRestoreDirectoriesUnderRootRestoreDir() throws Exception {
|
||||
callSetInput();
|
||||
|
||||
Map<String, Path> restoreDirs = subject.getSnapshotDirs(conf);
|
||||
|
||||
for (Path snapshotDir : restoreDirs.values()) {
|
||||
assertEquals("Expected " + snapshotDir + " to be a child of " + restoreDir, restoreDir,
|
||||
snapshotDir.getParent());
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testSetInputRestoresSnapshots() throws Exception {
|
||||
callSetInput();
|
||||
|
||||
Map<String, Path> snapshotDirs = subject.getSnapshotDirs(conf);
|
||||
|
||||
for (Map.Entry<String, Path> entry : snapshotDirs.entrySet()) {
|
||||
verify(this.subject).restoreSnapshot(eq(this.conf), eq(entry.getKey()), eq(this.rootDir),
|
||||
eq(entry.getValue()), any(FileSystem.class));
|
||||
}
|
||||
}
|
||||
}
|
|
@ -0,0 +1,68 @@
|
|||
/*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase.util;
|
||||
|
||||
import com.google.common.collect.ImmutableMap;
|
||||
import com.google.common.collect.Lists;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.hbase.testclassification.SmallTests;
|
||||
import org.junit.Before;
|
||||
import org.junit.Test;
|
||||
import org.junit.experimental.categories.Category;
|
||||
|
||||
import java.util.List;
|
||||
import java.util.Map;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertNull;
|
||||
|
||||
@Category({ SmallTests.class })
|
||||
public class TestConfigurationUtil {
|
||||
|
||||
private Configuration conf;
|
||||
private Map<String, String> keyValues;
|
||||
private String key;
|
||||
|
||||
@Before
|
||||
public void setUp() throws Exception {
|
||||
this.conf = new Configuration();
|
||||
this.keyValues = ImmutableMap.of("k1", "v1", "k2", "v2");
|
||||
this.key = "my_conf_key";
|
||||
}
|
||||
|
||||
public void callSetKeyValues() {
|
||||
ConfigurationUtil.setKeyValues(conf, key, keyValues.entrySet());
|
||||
}
|
||||
|
||||
public List<Map.Entry<String, String>> callGetKeyValues() {
|
||||
return ConfigurationUtil.getKeyValues(conf, key);
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testGetAndSetKeyValuesWithValues() throws Exception {
|
||||
callSetKeyValues();
|
||||
assertEquals(Lists.newArrayList(this.keyValues.entrySet()), callGetKeyValues());
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testGetKeyValuesWithUnsetKey() throws Exception {
|
||||
assertNull(callGetKeyValues());
|
||||
}
|
||||
|
||||
}
|
Loading…
Reference in New Issue