HBASE-27 hregioninfo cell empty in meta table
Summary of changes: HMaster: - When a row has an empty HRegionInfo (info:regioninfo), log it with the row name and and the other keys still in the row. - Log the number of rows with empty HRegionInfo - Delete the rows - Make RowMap inner class static, change methods to have package scope to avoid synthetic accessors. - Provide row name to getHRegionInfo so it can issue better log messages - add method deleteEmptyMetaRows to remove rows with empty HRegionInfo HRegion - change removeRegionFromMETA to use deleteAll rather than using a BatchUpdate containing deletes for each cell. TestEmptyMetaInfo - new test case git-svn-id: https://svn.apache.org/repos/asf/hadoop/hbase/trunk@636589 13f79535-47bb-0310-9956-ffa450edef68
This commit is contained in:
parent
6fb7767fc6
commit
9057e559a1
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@ -37,6 +37,7 @@ Hbase Change Log
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HBASE-495 No server address listed in .META.
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HBASE-433 HBASE-251 Region server should delete restore log after successful
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restore, Stuck replaying the edits of crashed machine.
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HBASE-27 hregioninfo cell empty in meta table
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IMPROVEMENTS
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HBASE-415 Rewrite leases to use DelayedBlockingQueue instead of polling
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@ -21,7 +21,8 @@ package org.apache.hadoop.hbase.master;
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import java.io.IOException;
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import java.util.concurrent.atomic.AtomicBoolean;
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import java.util.SortedMap;
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import java.util.ArrayList;
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import java.util.List;
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import java.util.Map;
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import java.util.HashMap;
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@ -36,7 +37,6 @@ import org.apache.hadoop.hbase.HRegionInfo;
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import org.apache.hadoop.hbase.HServerInfo;
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import org.apache.hadoop.io.Text;
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import org.apache.hadoop.hbase.HConstants;
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import org.apache.hadoop.hbase.io.HbaseMapWritable;
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import org.apache.hadoop.hbase.util.Writables;
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import org.apache.hadoop.hbase.RemoteExceptionHandler;
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import org.apache.hadoop.hbase.UnknownScannerException;
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@ -124,6 +124,7 @@ abstract class BaseScanner extends Chore implements HConstants {
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this.initialScanComplete = false;
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}
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/** @return true if initial scan completed successfully */
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public boolean isInitialScanComplete() {
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return initialScanComplete;
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}
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@ -152,6 +153,7 @@ abstract class BaseScanner extends Chore implements HConstants {
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// scan we go check if parents can be removed.
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Map<HRegionInfo, RowResult> splitParents =
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new HashMap<HRegionInfo, RowResult>();
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List<Text> emptyRows = new ArrayList<Text>();
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try {
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regionServer = master.connection.getHRegionConnection(region.getServer());
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scannerId =
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@ -165,8 +167,9 @@ abstract class BaseScanner extends Chore implements HConstants {
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break;
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}
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HRegionInfo info = master.getHRegionInfo(values);
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HRegionInfo info = master.getHRegionInfo(values.getRow(), values);
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if (info == null) {
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emptyRows.add(values.getRow());
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continue;
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}
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@ -206,12 +209,24 @@ abstract class BaseScanner extends Chore implements HConstants {
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}
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} catch (IOException e) {
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LOG.error("Closing scanner",
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RemoteExceptionHandler.checkIOException(e));
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RemoteExceptionHandler.checkIOException(e));
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}
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}
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// Scan is finished. Take a look at split parents to see if any we can
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// clean up.
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// Scan is finished.
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// First clean up any meta region rows which had null HRegionInfos
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if (emptyRows.size() > 0) {
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LOG.warn("Found " + emptyRows.size() +
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" rows with empty HRegionInfo while scanning meta region " +
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region.getRegionName());
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master.deleteEmptyMetaRows(regionServer, region.getRegionName(),
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emptyRows);
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}
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// Take a look at split parents to see if any we can clean up.
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if (splitParents.size() > 0) {
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for (Map.Entry<HRegionInfo, RowResult> e : splitParents.entrySet()) {
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HRegionInfo hri = e.getKey();
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@ -289,7 +304,7 @@ abstract class BaseScanner extends Chore implements HConstants {
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* @return True if still has references to parent.
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* @throws IOException
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*/
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protected boolean hasReferences(final Text metaRegionName,
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private boolean hasReferences(final Text metaRegionName,
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final HRegionInterface srvr, final Text parent,
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RowResult rowContent, final Text splitColumn)
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throws IOException {
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@ -21,49 +21,38 @@ package org.apache.hadoop.hbase.master;
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import java.io.IOException;
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import java.lang.reflect.Constructor;
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import java.util.ArrayList;
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import java.util.Collections;
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import java.util.HashMap;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Map;
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import java.util.Random;
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import java.util.Set;
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import java.util.SortedMap;
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import java.util.TreeMap;
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import java.util.concurrent.BlockingQueue;
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import java.util.concurrent.ConcurrentHashMap;
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import java.util.concurrent.DelayQueue;
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import java.util.concurrent.LinkedBlockingQueue;
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import java.util.concurrent.TimeUnit;
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import java.util.concurrent.atomic.AtomicBoolean;
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import java.util.concurrent.atomic.AtomicInteger;
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import java.util.concurrent.atomic.AtomicReference;
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import java.util.concurrent.locks.Lock;
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import java.util.concurrent.locks.ReentrantLock;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.io.BatchUpdate;
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import org.apache.hadoop.hbase.io.Cell;
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import org.apache.hadoop.hbase.io.RowResult;
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import org.apache.hadoop.hbase.ipc.HbaseRPC;
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import org.apache.hadoop.hbase.util.FSUtils;
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import org.apache.hadoop.hbase.util.InfoServer;
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import org.apache.hadoop.hbase.util.Sleeper;
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import org.apache.hadoop.hbase.util.Threads;
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import org.apache.hadoop.hbase.util.Writables;
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import org.apache.hadoop.hbase.io.HbaseMapWritable;
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import org.apache.hadoop.io.Text;
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import org.apache.hadoop.io.Writable;
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import org.apache.hadoop.ipc.RemoteException;
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import org.apache.hadoop.ipc.Server;
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import org.apache.hadoop.hbase.HConstants;
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import org.apache.hadoop.hbase.HBaseConfiguration;
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import org.apache.hadoop.hbase.HStoreKey;
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import org.apache.hadoop.hbase.Leases;
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import org.apache.hadoop.hbase.HServerAddress;
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import org.apache.hadoop.hbase.HColumnDescriptor;
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import org.apache.hadoop.hbase.HTableDescriptor;
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@ -75,7 +64,6 @@ import org.apache.hadoop.hbase.LocalHBaseCluster;
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import org.apache.hadoop.hbase.HServerInfo;
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import org.apache.hadoop.hbase.TableExistsException;
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import org.apache.hadoop.hbase.MasterNotRunningException;
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import org.apache.hadoop.hbase.LeaseListener;
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import org.apache.hadoop.hbase.client.HConnection;
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import org.apache.hadoop.hbase.client.HConnectionManager;
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@ -320,6 +308,9 @@ public class HMaster extends Thread implements HConstants, HMasterInterface,
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return rootServer;
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}
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/**
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* Wait until root region is available
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*/
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public void waitForRootRegionLocation() {
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regionManager.waitForRootRegionLocation();
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}
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@ -471,7 +462,6 @@ public class HMaster extends Thread implements HConstants, HMasterInterface,
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* need to install an unexpected exception handler.
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*/
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private void startServiceThreads() {
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String threadName = Thread.currentThread().getName();
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try {
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regionManager.start();
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serverManager.start();
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@ -693,21 +683,45 @@ public class HMaster extends Thread implements HConstants, HMasterInterface,
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* Get HRegionInfo from passed META map of row values.
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* Returns null if none found (and logs fact that expected COL_REGIONINFO
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* was missing). Utility method used by scanners of META tables.
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* @param row name of the row
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* @param map Map to do lookup in.
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* @return Null or found HRegionInfo.
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* @throws IOException
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*/
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HRegionInfo getHRegionInfo(final Map<Text, Cell> map)
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HRegionInfo getHRegionInfo(final Text row, final Map<Text, Cell> map)
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throws IOException {
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Cell regioninfo = map.get(COL_REGIONINFO);
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if (regioninfo == null) {
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LOG.warn(COL_REGIONINFO.toString() + " is empty; has keys: " +
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map.keySet().toString());
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LOG.warn(COL_REGIONINFO.toString() + " is empty for row: " + row +
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"; has keys: " + map.keySet().toString());
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return null;
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}
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return (HRegionInfo)Writables.getWritable(regioninfo.getValue(), new HRegionInfo());
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}
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/*
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* When we find rows in a meta region that has an empty HRegionInfo, we
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* clean them up here.
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*
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* @param server connection to server serving meta region
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* @param metaRegionName name of the meta region we scanned
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* @param emptyRows the row keys that had empty HRegionInfos
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*/
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protected void deleteEmptyMetaRows(HRegionInterface server,
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Text metaRegionName,
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List<Text> emptyRows) {
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for (Text regionName: emptyRows) {
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try {
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HRegion.removeRegionFromMETA(server, metaRegionName, regionName);
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LOG.warn("Removed region: " + regionName + " from meta region: " +
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metaRegionName + " because HRegionInfo was empty");
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} catch (IOException e) {
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LOG.error("deleting region: " + regionName + " from meta region: " +
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metaRegionName, e);
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}
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}
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}
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/*
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* Main program
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*/
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@ -24,14 +24,13 @@ import java.io.UnsupportedEncodingException;
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import java.util.ArrayList;
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import java.util.HashSet;
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import java.util.List;
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import java.util.SortedMap;
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import java.util.Set;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.HRegionInfo;
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import org.apache.hadoop.hbase.HServerAddress;
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import org.apache.hadoop.hbase.HServerInfo;
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import org.apache.hadoop.hbase.RemoteExceptionHandler;
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import org.apache.hadoop.hbase.io.HbaseMapWritable;
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import org.apache.hadoop.hbase.ipc.HRegionInterface;
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import org.apache.hadoop.hbase.regionserver.HLog;
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import org.apache.hadoop.hbase.regionserver.HRegion;
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@ -66,6 +65,7 @@ class ProcessServerShutdown extends RegionServerOperation {
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}
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/**
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* @param master
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* @param serverInfo
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*/
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public ProcessServerShutdown(HMaster master, HServerInfo serverInfo) {
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private void scanMetaRegion(HRegionInterface server, long scannerId,
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Text regionName) throws IOException {
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ArrayList<ToDoEntry> toDoList = new ArrayList<ToDoEntry>();
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HashSet<HRegionInfo> regions = new HashSet<HRegionInfo>();
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List<ToDoEntry> toDoList = new ArrayList<ToDoEntry>();
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Set<HRegionInfo> regions = new HashSet<HRegionInfo>();
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List<Text> emptyRows = new ArrayList<Text>();
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try {
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while (true) {
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RowResult values = null;
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}
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// Bingo! Found it.
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HRegionInfo info = master.getHRegionInfo(values);
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HRegionInfo info = master.getHRegionInfo(row, values);
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if (info == null) {
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emptyRows.add(row);
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continue;
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}
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}
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}
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// Scan complete. Remove any rows which had empty HRegionInfos
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if (emptyRows.size() > 0) {
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LOG.warn("Found " + emptyRows.size() +
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" rows with empty HRegionInfo while scanning meta region " +
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regionName);
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master.deleteEmptyMetaRows(server, regionName, emptyRows);
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}
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// Update server in root/meta entries
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for (ToDoEntry e: toDoList) {
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if (e.deleteRegion) {
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@ -36,10 +36,10 @@ import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
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* Data structure used to return results out of the toRowMap method.
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*/
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class RowMap {
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static final Log LOG = LogFactory.getLog(RowMap.class.getName());
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private static final Log LOG = LogFactory.getLog(RowMap.class.getName());
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final Text row;
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final SortedMap<Text, byte[]> map;
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private final Text row;
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private final SortedMap<Text, byte[]> map;
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RowMap(final Text r, final SortedMap<Text, byte[]> m) {
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this.row = r;
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* @return Returns a SortedMap currently. TODO: This looks like it could
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* be a plain Map.
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*/
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public static RowMap fromHbaseMapWritable(HbaseMapWritable mw) {
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static RowMap fromHbaseMapWritable(HbaseMapWritable mw) {
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if (mw == null) {
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throw new IllegalArgumentException("Passed MapWritable cannot be null");
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}
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@ -21,7 +21,6 @@ package org.apache.hadoop.hbase.master;
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import java.io.IOException;
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import java.util.Map;
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import java.util.HashMap;
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import java.util.SortedMap;
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import java.util.TreeMap;
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import java.util.Set;
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@ -51,11 +50,11 @@ class ServerManager implements HConstants {
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static final Log LOG = LogFactory.getLog(ServerManager.class.getName());
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/** The map of known server names to server info */
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private final Map<String, HServerInfo> serversToServerInfo =
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final Map<String, HServerInfo> serversToServerInfo =
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new ConcurrentHashMap<String, HServerInfo>();
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/** Set of known dead servers */
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private final Set<String> deadServers =
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final Set<String> deadServers =
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Collections.synchronizedSet(new HashSet<String>());
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/** SortedMap server load -> Set of server names */
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@ -63,20 +62,27 @@ class ServerManager implements HConstants {
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Collections.synchronizedSortedMap(new TreeMap<HServerLoad, Set<String>>());
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/** Map of server names -> server load */
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private final Map<String, HServerLoad> serversToLoad =
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final Map<String, HServerLoad> serversToLoad =
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new ConcurrentHashMap<String, HServerLoad>();
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private HMaster master;
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HMaster master;
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private final Leases serverLeases;
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/**
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* @param master
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*/
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public ServerManager(HMaster master) {
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this.master = master;
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serverLeases = new Leases(master.leaseTimeout,
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master.conf.getInt("hbase.master.lease.thread.wakefrequency", 15 * 1000));
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}
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/** Let the server manager know a new regionserver has come online */
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/**
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* Let the server manager know a new regionserver has come online
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*
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* @param serverInfo
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*/
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public void regionServerStartup(HServerInfo serverInfo) {
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String s = serverInfo.getServerAddress().toString().trim();
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LOG.info("received start message from: " + s);
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@ -121,7 +127,14 @@ class ServerManager implements HConstants {
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loadToServers.put(load, servers);
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}
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/** {@inheritDoc} */
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/**
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* @param serverInfo
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* @param msgs
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* @return messages from master to region server indicating what region
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* server should do.
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*
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* @throws IOException
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*/
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public HMsg[] regionServerReport(HServerInfo serverInfo, HMsg msgs[])
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throws IOException {
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String serverName = serverInfo.getServerAddress().toString().trim();
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@ -377,7 +390,16 @@ class ServerManager implements HConstants {
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return returnMsgs.toArray(new HMsg[returnMsgs.size()]);
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}
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/** A region has split. **/
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/**
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* A region has split.
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*
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* @param serverName
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* @param serverInfo
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* @param region
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* @param splitA
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* @param splitB
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* @param returnMsgs
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*/
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private void processSplitRegion(String serverName, HServerInfo serverInfo,
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HRegionInfo region, HMsg splitA, HMsg splitB, ArrayList<HMsg> returnMsgs) {
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@ -467,54 +489,6 @@ class ServerManager implements HConstants {
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}
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}
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/** Region server reporting that it has closed a region */
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private void processRegionClose(String serverName, HServerInfo info,
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HRegionInfo region) {
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LOG.info(info.getServerAddress().toString() + " no longer serving " +
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region.getRegionName());
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if (region.isRootRegion()) {
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if (region.isOffline()) {
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// Can't proceed without root region. Shutdown.
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LOG.fatal("root region is marked offline");
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master.shutdown();
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}
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master.regionManager.unassignRootRegion();
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} else {
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boolean reassignRegion = !region.isOffline();
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boolean deleteRegion = false;
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if (master.regionManager.isClosing(region.getRegionName())) {
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master.regionManager.noLongerClosing(region.getRegionName());
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reassignRegion = false;
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}
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if (master.regionManager.isMarkedForDeletion(region.getRegionName())) {
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master.regionManager.regionDeleted(region.getRegionName());
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reassignRegion = false;
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deleteRegion = true;
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}
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if (region.isMetaTable()) {
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// Region is part of the meta table. Remove it from onlineMetaRegions
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master.regionManager.offlineMetaRegion(region.getStartKey());
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}
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// NOTE: we cannot put the region into unassignedRegions as that
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// could create a race with the pending close if it gets
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// reassigned before the close is processed.
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master.regionManager.noLongerUnassigned(region);
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try {
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master.toDoQueue.put(new ProcessRegionClose(master, region, reassignRegion,
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deleteRegion));
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} catch (InterruptedException e) {
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throw new RuntimeException(
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"Putting into toDoQueue was interrupted.", e);
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}
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}
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}
|
||||
|
||||
/** Cancel a server's lease and update its load information */
|
||||
private boolean cancelLease(final String serverName) {
|
||||
boolean leaseCancelled = false;
|
||||
|
@ -544,16 +518,20 @@ class ServerManager implements HConstants {
|
|||
}
|
||||
|
||||
|
||||
/** compute the average load across all region servers */
|
||||
/** @return the average load across all region servers */
|
||||
public int averageLoad() {
|
||||
return 0;
|
||||
}
|
||||
|
||||
/** @return the number of active servers */
|
||||
public int numServers() {
|
||||
return serversToServerInfo.size();
|
||||
}
|
||||
|
||||
/** get HServerInfo from a server address */
|
||||
/**
|
||||
* @param address server address
|
||||
* @return HServerInfo for the given server address
|
||||
*/
|
||||
public HServerInfo getServerInfo(String address) {
|
||||
return serversToServerInfo.get(address);
|
||||
}
|
||||
|
@ -579,6 +557,9 @@ class ServerManager implements HConstants {
|
|||
return Collections.unmodifiableMap(loadToServers);
|
||||
}
|
||||
|
||||
/**
|
||||
* Wakes up threads waiting on serversToServerInfo
|
||||
*/
|
||||
public void notifyServers() {
|
||||
synchronized (serversToServerInfo) {
|
||||
serversToServerInfo.notifyAll();
|
||||
|
@ -666,10 +647,17 @@ class ServerManager implements HConstants {
|
|||
serverLeases.close();
|
||||
}
|
||||
|
||||
/**
|
||||
* @param serverName
|
||||
*/
|
||||
public void removeDeadServer(String serverName) {
|
||||
deadServers.remove(serverName);
|
||||
}
|
||||
|
||||
/**
|
||||
* @param serverName
|
||||
* @return true if server is dead
|
||||
*/
|
||||
public boolean isDead(String serverName) {
|
||||
return deadServers.contains(serverName);
|
||||
}
|
||||
|
|
|
@ -20,9 +20,10 @@
|
|||
package org.apache.hadoop.hbase.master;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
import java.util.HashSet;
|
||||
import java.util.List;
|
||||
import java.util.Set;
|
||||
import java.util.SortedMap;
|
||||
|
||||
import org.apache.commons.logging.Log;
|
||||
import org.apache.commons.logging.LogFactory;
|
||||
|
@ -32,10 +33,8 @@ import org.apache.hadoop.hbase.ipc.HRegionInterface;
|
|||
import org.apache.hadoop.hbase.HServerInfo;
|
||||
import org.apache.hadoop.hbase.MasterNotRunningException;
|
||||
import org.apache.hadoop.hbase.RemoteExceptionHandler;
|
||||
import org.apache.hadoop.hbase.io.HbaseMapWritable;
|
||||
import org.apache.hadoop.hbase.util.Writables;
|
||||
import org.apache.hadoop.io.Text;
|
||||
import org.apache.hadoop.hbase.io.Cell;
|
||||
import org.apache.hadoop.hbase.io.RowResult;
|
||||
|
||||
/**
|
||||
|
@ -95,14 +94,17 @@ abstract class TableOperation implements HConstants {
|
|||
server.openScanner(m.getRegionName(), COLUMN_FAMILY_ARRAY,
|
||||
tableName, System.currentTimeMillis(), null);
|
||||
|
||||
List<Text> emptyRows = new ArrayList<Text>();
|
||||
try {
|
||||
while (true) {
|
||||
RowResult values = server.next(scannerId);
|
||||
if(values == null || values.size() == 0) {
|
||||
break;
|
||||
}
|
||||
HRegionInfo info = this.master.getHRegionInfo(values);
|
||||
HRegionInfo info =
|
||||
this.master.getHRegionInfo(values.getRow(), values);
|
||||
if (info == null) {
|
||||
emptyRows.add(values.getRow());
|
||||
throw new IOException(COL_REGIONINFO + " not found on " +
|
||||
values.getRow());
|
||||
}
|
||||
|
@ -131,6 +133,15 @@ abstract class TableOperation implements HConstants {
|
|||
}
|
||||
scannerId = -1L;
|
||||
}
|
||||
|
||||
// Get rid of any rows that have a null HRegionInfo
|
||||
|
||||
if (emptyRows.size() > 0) {
|
||||
LOG.warn("Found " + emptyRows.size() +
|
||||
" rows with empty HRegionInfo while scanning meta region " +
|
||||
m.getRegionName());
|
||||
master.deleteEmptyMetaRows(server, m.getRegionName(), emptyRows);
|
||||
}
|
||||
|
||||
if (!tableExists) {
|
||||
throw new IOException(tableName + " does not exist");
|
||||
|
|
|
@ -0,0 +1,79 @@
|
|||
/**
|
||||
* Copyright 2008 The Apache Software Foundation
|
||||
*
|
||||
* Licensed to the Apache Software Foundation (ASF) under one
|
||||
* or more contributor license agreements. See the NOTICE file
|
||||
* distributed with this work for additional information
|
||||
* regarding copyright ownership. The ASF licenses this file
|
||||
* to you under the Apache License, Version 2.0 (the
|
||||
* "License"); you may not use this file except in compliance
|
||||
* with the License. You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
|
||||
package org.apache.hadoop.hbase;
|
||||
|
||||
import java.io.IOException;
|
||||
|
||||
import java.util.SortedMap;
|
||||
import java.util.TreeMap;
|
||||
|
||||
import org.apache.hadoop.io.Text;
|
||||
|
||||
import org.apache.hadoop.hbase.client.HTable;
|
||||
import org.apache.hadoop.hbase.io.BatchUpdate;
|
||||
|
||||
/**
|
||||
* Tests master cleanup of rows in meta table where there is no HRegionInfo
|
||||
*/
|
||||
public class TestEmptyMetaInfo extends HBaseClusterTestCase {
|
||||
/**
|
||||
* Insert some bogus rows in meta. Master should clean them up.
|
||||
* @throws IOException
|
||||
*/
|
||||
public void testEmptyMetaInfo() throws IOException {
|
||||
HTable t = new HTable(conf, HConstants.META_TABLE_NAME);
|
||||
for (int i = 0; i < 5; i++) {
|
||||
Text regionName = new Text("tablename," + (i == 0 ? "" : (i +",")) +
|
||||
System.currentTimeMillis());
|
||||
BatchUpdate b = new BatchUpdate(regionName);
|
||||
b.put(HConstants.COL_SERVER,
|
||||
"localhost:1234".getBytes(HConstants.UTF8_ENCODING));
|
||||
t.commit(b);
|
||||
}
|
||||
long sleepTime =
|
||||
conf.getLong("hbase.master.meta.thread.rescanfrequency", 10000);
|
||||
int tries = conf.getInt("hbase.client.retries.number", 5);
|
||||
int count = 0;
|
||||
do {
|
||||
tries -= 1;
|
||||
try {
|
||||
Thread.sleep(sleepTime);
|
||||
} catch (InterruptedException e) {
|
||||
// ignore
|
||||
}
|
||||
HScannerInterface scanner =
|
||||
t.obtainScanner(HConstants.ALL_META_COLUMNS, new Text("tablename"));
|
||||
|
||||
try {
|
||||
count = 0;
|
||||
HStoreKey key = new HStoreKey();
|
||||
SortedMap<Text, byte[]> results = new TreeMap<Text, byte[]>();
|
||||
while (scanner.next(key, results)) {
|
||||
count += 1;
|
||||
}
|
||||
} finally {
|
||||
scanner.close();
|
||||
}
|
||||
} while (count != 0 && tries >= 0);
|
||||
assertTrue(tries >= 0);
|
||||
assertEquals(0, count);
|
||||
}
|
||||
}
|
Loading…
Reference in New Issue