HBASE-16032 Possible memory leak in StoreScanner
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@ -5688,10 +5688,15 @@ public class HRegion implements HeapSize, PropagatingConfigurationObserver, Regi
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List<KeyValueScanner> scanners = new ArrayList<KeyValueScanner>(scan.getFamilyMap().size());
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List<KeyValueScanner> scanners = new ArrayList<KeyValueScanner>(scan.getFamilyMap().size());
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List<KeyValueScanner> joinedScanners
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List<KeyValueScanner> joinedScanners
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= new ArrayList<KeyValueScanner>(scan.getFamilyMap().size());
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= new ArrayList<KeyValueScanner>(scan.getFamilyMap().size());
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if (additionalScanners != null) {
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// Store all already instantiated scanners for exception handling
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List<KeyValueScanner> instantiatedScanners = new ArrayList<KeyValueScanner>();
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// handle additionalScanners
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if (additionalScanners != null && !additionalScanners.isEmpty()) {
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scanners.addAll(additionalScanners);
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scanners.addAll(additionalScanners);
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instantiatedScanners.addAll(additionalScanners);
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}
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}
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try {
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for (Map.Entry<byte[], NavigableSet<byte[]>> entry : scan.getFamilyMap().entrySet()) {
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for (Map.Entry<byte[], NavigableSet<byte[]>> entry : scan.getFamilyMap().entrySet()) {
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Store store = stores.get(entry.getKey());
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Store store = stores.get(entry.getKey());
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KeyValueScanner scanner;
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KeyValueScanner scanner;
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@ -5700,6 +5705,7 @@ public class HRegion implements HeapSize, PropagatingConfigurationObserver, Regi
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} catch (FileNotFoundException e) {
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} catch (FileNotFoundException e) {
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throw handleFileNotFound(e);
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throw handleFileNotFound(e);
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}
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}
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instantiatedScanners.add(scanner);
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if (this.filter == null || !scan.doLoadColumnFamiliesOnDemand()
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if (this.filter == null || !scan.doLoadColumnFamiliesOnDemand()
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|| this.filter.isFamilyEssential(entry.getKey())) {
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|| this.filter.isFamilyEssential(entry.getKey())) {
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scanners.add(scanner);
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scanners.add(scanner);
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@ -5708,6 +5714,13 @@ public class HRegion implements HeapSize, PropagatingConfigurationObserver, Regi
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}
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}
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}
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}
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initializeKVHeap(scanners, joinedScanners, region);
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initializeKVHeap(scanners, joinedScanners, region);
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} catch (IOException e) {
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// close all already instantiated scanners before throwing the exception
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for (KeyValueScanner scanner : instantiatedScanners) {
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scanner.close();
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}
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throw e;
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}
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}
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}
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protected void initializeKVHeap(List<KeyValueScanner> scanners,
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protected void initializeKVHeap(List<KeyValueScanner> scanners,
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@ -198,6 +198,7 @@ public class StoreScanner extends NonReversedNonLazyKeyValueScanner
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this.store.addChangedReaderObserver(this);
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this.store.addChangedReaderObserver(this);
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try {
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// Pass columns to try to filter out unnecessary StoreFiles.
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// Pass columns to try to filter out unnecessary StoreFiles.
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List<KeyValueScanner> scanners = getScannersNoCompaction();
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List<KeyValueScanner> scanners = getScannersNoCompaction();
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@ -205,8 +206,8 @@ public class StoreScanner extends NonReversedNonLazyKeyValueScanner
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// key does not exist, then to the start of the next matching Row).
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// key does not exist, then to the start of the next matching Row).
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// Always check bloom filter to optimize the top row seek for delete
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// Always check bloom filter to optimize the top row seek for delete
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// family marker.
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// family marker.
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seekScanners(scanners, matcher.getStartKey(), explicitColumnQuery
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seekScanners(scanners, matcher.getStartKey(), explicitColumnQuery && lazySeekEnabledGlobally,
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&& lazySeekEnabledGlobally, parallelSeekEnabled);
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parallelSeekEnabled);
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// set storeLimit
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// set storeLimit
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this.storeLimit = scan.getMaxResultsPerColumnFamily();
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this.storeLimit = scan.getMaxResultsPerColumnFamily();
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@ -216,6 +217,12 @@ public class StoreScanner extends NonReversedNonLazyKeyValueScanner
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addCurrentScanners(scanners);
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addCurrentScanners(scanners);
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// Combine all seeked scanners with a heap
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// Combine all seeked scanners with a heap
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resetKVHeap(scanners, store.getComparator());
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resetKVHeap(scanners, store.getComparator());
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} catch (IOException e) {
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// remove us from the HStore#changedReaderObservers here or we'll have no chance to
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// and might cause memory leak
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this.store.deleteChangedReaderObserver(this);
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throw e;
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}
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}
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}
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/**
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/**
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