HBASE-10526 Using Cell instead of KeyValue in HFileOutputFormat
git-svn-id: https://svn.apache.org/repos/asf/hbase/trunk@1570702 13f79535-47bb-0310-9956-ffa450edef68
This commit is contained in:
jxiang
parent
0aa78ca07b
commit
e4f8a7419f
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@ -18,52 +18,27 @@
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*/
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*/
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package org.apache.hadoop.hbase.mapreduce;
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package org.apache.hadoop.hbase.mapreduce;
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import com.google.common.annotations.VisibleForTesting;
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import java.io.IOException;
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import java.io.IOException;
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import java.io.UnsupportedEncodingException;
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import java.net.URLDecoder;
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import java.net.URLEncoder;
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import java.util.ArrayList;
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import java.util.Collection;
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import java.util.List;
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import java.util.List;
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import java.util.Map;
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import java.util.Map;
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import java.util.TreeMap;
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import java.util.TreeSet;
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import java.util.UUID;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.classification.InterfaceAudience;
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import org.apache.hadoop.classification.InterfaceAudience;
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import org.apache.hadoop.classification.InterfaceStability;
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import org.apache.hadoop.classification.InterfaceStability;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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import org.apache.hadoop.hbase.HColumnDescriptor;
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import org.apache.hadoop.hbase.HConstants;
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import org.apache.hadoop.hbase.HTableDescriptor;
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import org.apache.hadoop.hbase.KeyValue;
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import org.apache.hadoop.hbase.KeyValue;
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import org.apache.hadoop.hbase.client.HTable;
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import org.apache.hadoop.hbase.client.HTable;
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import org.apache.hadoop.hbase.client.Put;
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import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
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import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
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import org.apache.hadoop.hbase.io.compress.Compression;
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import org.apache.hadoop.hbase.io.compress.Compression.Algorithm;
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import org.apache.hadoop.hbase.io.compress.Compression.Algorithm;
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import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
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import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
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import org.apache.hadoop.hbase.io.hfile.AbstractHFileWriter;
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import org.apache.hadoop.hbase.io.hfile.CacheConfig;
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import org.apache.hadoop.hbase.io.hfile.HFileContext;
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import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
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import org.apache.hadoop.hbase.regionserver.BloomType;
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import org.apache.hadoop.hbase.regionserver.BloomType;
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import org.apache.hadoop.hbase.regionserver.HStore;
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import org.apache.hadoop.hbase.regionserver.StoreFile;
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import org.apache.hadoop.hbase.util.Bytes;
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import org.apache.hadoop.io.NullWritable;
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import org.apache.hadoop.io.SequenceFile;
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import org.apache.hadoop.io.Text;
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import org.apache.hadoop.mapreduce.Job;
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import org.apache.hadoop.mapreduce.Job;
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import org.apache.hadoop.mapreduce.RecordWriter;
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import org.apache.hadoop.mapreduce.RecordWriter;
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import org.apache.hadoop.mapreduce.TaskAttemptContext;
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import org.apache.hadoop.mapreduce.TaskAttemptContext;
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import org.apache.hadoop.mapreduce.lib.output.FileOutputCommitter;
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import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
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import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
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import org.apache.hadoop.mapreduce.lib.partition.TotalOrderPartitioner;
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import com.google.common.annotations.VisibleForTesting;
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/**
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/**
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* Writes HFiles. Passed KeyValues must arrive in order.
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* Writes HFiles. Passed KeyValues must arrive in order.
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@ -74,251 +49,24 @@ import org.apache.hadoop.mapreduce.lib.partition.TotalOrderPartitioner;
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* Using this class as part of a MapReduce job is best done
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* Using this class as part of a MapReduce job is best done
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* using {@link #configureIncrementalLoad(Job, HTable)}.
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* using {@link #configureIncrementalLoad(Job, HTable)}.
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* @see KeyValueSortReducer
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* @see KeyValueSortReducer
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* @deprecated use {@link HFileOutputFormat2} instead.
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*/
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*/
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@Deprecated
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@InterfaceAudience.Public
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@InterfaceAudience.Public
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@InterfaceStability.Stable
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@InterfaceStability.Stable
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public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable, KeyValue> {
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public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable, KeyValue> {
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static Log LOG = LogFactory.getLog(HFileOutputFormat.class);
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static Log LOG = LogFactory.getLog(HFileOutputFormat.class);
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// The following constants are private since these are used by
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// HFileOutputFormat to internally transfer data between job setup and
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// reducer run using conf.
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// These should not be changed by the client.
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private static final String COMPRESSION_FAMILIES_CONF_KEY =
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"hbase.hfileoutputformat.families.compression";
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private static final String BLOOM_TYPE_FAMILIES_CONF_KEY =
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"hbase.hfileoutputformat.families.bloomtype";
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private static final String BLOCK_SIZE_FAMILIES_CONF_KEY =
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"hbase.mapreduce.hfileoutputformat.blocksize";
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private static final String DATABLOCK_ENCODING_FAMILIES_CONF_KEY =
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"hbase.mapreduce.hfileoutputformat.families.datablock.encoding";
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// This constant is public since the client can modify this when setting
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// This constant is public since the client can modify this when setting
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// up their conf object and thus refer to this symbol.
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// up their conf object and thus refer to this symbol.
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// It is present for backwards compatibility reasons. Use it only to
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// It is present for backwards compatibility reasons. Use it only to
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// override the auto-detection of datablock encoding.
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// override the auto-detection of datablock encoding.
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public static final String DATABLOCK_ENCODING_OVERRIDE_CONF_KEY =
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public static final String DATABLOCK_ENCODING_OVERRIDE_CONF_KEY =
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"hbase.mapreduce.hfileoutputformat.datablock.encoding";
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HFileOutputFormat2.DATABLOCK_ENCODING_OVERRIDE_CONF_KEY;
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public RecordWriter<ImmutableBytesWritable, KeyValue> getRecordWriter(final TaskAttemptContext context)
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public RecordWriter<ImmutableBytesWritable, KeyValue> getRecordWriter(
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throws IOException, InterruptedException {
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final TaskAttemptContext context) throws IOException, InterruptedException {
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// Get the path of the temporary output file
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return HFileOutputFormat2.createRecordWriter(context);
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final Path outputPath = FileOutputFormat.getOutputPath(context);
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final Path outputdir = new FileOutputCommitter(outputPath, context).getWorkPath();
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final Configuration conf = context.getConfiguration();
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final FileSystem fs = outputdir.getFileSystem(conf);
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// These configs. are from hbase-*.xml
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final long maxsize = conf.getLong(HConstants.HREGION_MAX_FILESIZE,
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HConstants.DEFAULT_MAX_FILE_SIZE);
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// Invented config. Add to hbase-*.xml if other than default compression.
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final String defaultCompressionStr = conf.get("hfile.compression",
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Compression.Algorithm.NONE.getName());
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final Algorithm defaultCompression = AbstractHFileWriter
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.compressionByName(defaultCompressionStr);
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final boolean compactionExclude = conf.getBoolean(
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"hbase.mapreduce.hfileoutputformat.compaction.exclude", false);
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// create a map from column family to the compression algorithm
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final Map<byte[], Algorithm> compressionMap = createFamilyCompressionMap(conf);
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final Map<byte[], BloomType> bloomTypeMap = createFamilyBloomTypeMap(conf);
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final Map<byte[], Integer> blockSizeMap = createFamilyBlockSizeMap(conf);
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String dataBlockEncodingStr = conf.get(DATABLOCK_ENCODING_OVERRIDE_CONF_KEY);
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final Map<byte[], DataBlockEncoding> datablockEncodingMap
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= createFamilyDataBlockEncodingMap(conf);
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final DataBlockEncoding overriddenEncoding;
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if (dataBlockEncodingStr != null) {
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overriddenEncoding = DataBlockEncoding.valueOf(dataBlockEncodingStr);
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} else {
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overriddenEncoding = null;
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}
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return new RecordWriter<ImmutableBytesWritable, KeyValue>() {
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// Map of families to writers and how much has been output on the writer.
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private final Map<byte [], WriterLength> writers =
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new TreeMap<byte [], WriterLength>(Bytes.BYTES_COMPARATOR);
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private byte [] previousRow = HConstants.EMPTY_BYTE_ARRAY;
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private final byte [] now = Bytes.toBytes(System.currentTimeMillis());
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private boolean rollRequested = false;
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public void write(ImmutableBytesWritable row, KeyValue kv)
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throws IOException {
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// null input == user explicitly wants to flush
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if (row == null && kv == null) {
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rollWriters();
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return;
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}
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byte [] rowKey = kv.getRow();
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long length = kv.getLength();
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byte [] family = kv.getFamily();
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WriterLength wl = this.writers.get(family);
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// If this is a new column family, verify that the directory exists
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if (wl == null) {
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fs.mkdirs(new Path(outputdir, Bytes.toString(family)));
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}
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// If any of the HFiles for the column families has reached
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// maxsize, we need to roll all the writers
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if (wl != null && wl.written + length >= maxsize) {
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this.rollRequested = true;
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}
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// This can only happen once a row is finished though
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if (rollRequested && Bytes.compareTo(this.previousRow, rowKey) != 0) {
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rollWriters();
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}
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// create a new HLog writer, if necessary
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if (wl == null || wl.writer == null) {
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wl = getNewWriter(family, conf);
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}
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// we now have the proper HLog writer. full steam ahead
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kv.updateLatestStamp(this.now);
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wl.writer.append(kv);
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wl.written += length;
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// Copy the row so we know when a row transition.
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this.previousRow = rowKey;
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}
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private void rollWriters() throws IOException {
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for (WriterLength wl : this.writers.values()) {
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if (wl.writer != null) {
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LOG.info("Writer=" + wl.writer.getPath() +
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((wl.written == 0)? "": ", wrote=" + wl.written));
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close(wl.writer);
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}
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wl.writer = null;
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wl.written = 0;
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}
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this.rollRequested = false;
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}
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/* Create a new StoreFile.Writer.
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* @param family
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* @return A WriterLength, containing a new StoreFile.Writer.
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* @throws IOException
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*/
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private WriterLength getNewWriter(byte[] family, Configuration conf)
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throws IOException {
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WriterLength wl = new WriterLength();
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Path familydir = new Path(outputdir, Bytes.toString(family));
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Algorithm compression = compressionMap.get(family);
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compression = compression == null ? defaultCompression : compression;
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BloomType bloomType = bloomTypeMap.get(family);
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bloomType = bloomType == null ? BloomType.NONE : bloomType;
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Integer blockSize = blockSizeMap.get(family);
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blockSize = blockSize == null ? HConstants.DEFAULT_BLOCKSIZE : blockSize;
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DataBlockEncoding encoding = overriddenEncoding;
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encoding = encoding == null ? datablockEncodingMap.get(family) : encoding;
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encoding = encoding == null ? DataBlockEncoding.NONE : encoding;
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Configuration tempConf = new Configuration(conf);
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tempConf.setFloat(HConstants.HFILE_BLOCK_CACHE_SIZE_KEY, 0.0f);
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HFileContextBuilder contextBuilder = new HFileContextBuilder()
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.withCompression(compression)
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.withChecksumType(HStore.getChecksumType(conf))
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.withBytesPerCheckSum(HStore.getBytesPerChecksum(conf))
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.withBlockSize(blockSize);
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contextBuilder.withDataBlockEncoding(encoding);
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HFileContext hFileContext = contextBuilder.build();
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wl.writer = new StoreFile.WriterBuilder(conf, new CacheConfig(tempConf), fs)
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.withOutputDir(familydir).withBloomType(bloomType).withComparator(KeyValue.COMPARATOR)
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.withFileContext(hFileContext)
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.build();
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this.writers.put(family, wl);
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return wl;
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}
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private void close(final StoreFile.Writer w) throws IOException {
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if (w != null) {
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w.appendFileInfo(StoreFile.BULKLOAD_TIME_KEY,
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Bytes.toBytes(System.currentTimeMillis()));
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w.appendFileInfo(StoreFile.BULKLOAD_TASK_KEY,
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Bytes.toBytes(context.getTaskAttemptID().toString()));
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w.appendFileInfo(StoreFile.MAJOR_COMPACTION_KEY,
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Bytes.toBytes(true));
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w.appendFileInfo(StoreFile.EXCLUDE_FROM_MINOR_COMPACTION_KEY,
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Bytes.toBytes(compactionExclude));
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w.appendTrackedTimestampsToMetadata();
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w.close();
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}
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}
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public void close(TaskAttemptContext c)
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throws IOException, InterruptedException {
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for (WriterLength wl: this.writers.values()) {
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close(wl.writer);
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}
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}
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};
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}
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/*
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* Data structure to hold a Writer and amount of data written on it.
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*/
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static class WriterLength {
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long written = 0;
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StoreFile.Writer writer = null;
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}
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/**
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* Return the start keys of all of the regions in this table,
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* as a list of ImmutableBytesWritable.
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*/
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private static List<ImmutableBytesWritable> getRegionStartKeys(HTable table)
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throws IOException {
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byte[][] byteKeys = table.getStartKeys();
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ArrayList<ImmutableBytesWritable> ret =
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new ArrayList<ImmutableBytesWritable>(byteKeys.length);
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for (byte[] byteKey : byteKeys) {
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ret.add(new ImmutableBytesWritable(byteKey));
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}
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return ret;
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}
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/**
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* Write out a {@link SequenceFile} that can be read by
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* {@link TotalOrderPartitioner} that contains the split points in startKeys.
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*/
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private static void writePartitions(Configuration conf, Path partitionsPath,
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List<ImmutableBytesWritable> startKeys) throws IOException {
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LOG.info("Writing partition information to " + partitionsPath);
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if (startKeys.isEmpty()) {
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throw new IllegalArgumentException("No regions passed");
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}
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// We're generating a list of split points, and we don't ever
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// have keys < the first region (which has an empty start key)
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// so we need to remove it. Otherwise we would end up with an
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// empty reducer with index 0
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TreeSet<ImmutableBytesWritable> sorted =
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new TreeSet<ImmutableBytesWritable>(startKeys);
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ImmutableBytesWritable first = sorted.first();
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if (!first.equals(HConstants.EMPTY_BYTE_ARRAY)) {
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throw new IllegalArgumentException(
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"First region of table should have empty start key. Instead has: "
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+ Bytes.toStringBinary(first.get()));
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}
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sorted.remove(first);
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// Write the actual file
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FileSystem fs = partitionsPath.getFileSystem(conf);
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SequenceFile.Writer writer = SequenceFile.createWriter(fs,
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conf, partitionsPath, ImmutableBytesWritable.class, NullWritable.class);
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try {
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for (ImmutableBytesWritable startKey : sorted) {
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writer.append(startKey, NullWritable.get());
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}
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} finally {
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writer.close();
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}
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}
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}
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/**
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/**
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@ -336,47 +84,8 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
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* running this function.
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* running this function.
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*/
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*/
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public static void configureIncrementalLoad(Job job, HTable table)
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public static void configureIncrementalLoad(Job job, HTable table)
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throws IOException {
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throws IOException {
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Configuration conf = job.getConfiguration();
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HFileOutputFormat2.configureIncrementalLoad(job, table, HFileOutputFormat.class);
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job.setOutputKeyClass(ImmutableBytesWritable.class);
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job.setOutputValueClass(KeyValue.class);
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job.setOutputFormatClass(HFileOutputFormat.class);
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// Based on the configured map output class, set the correct reducer to properly
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// sort the incoming values.
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// TODO it would be nice to pick one or the other of these formats.
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if (KeyValue.class.equals(job.getMapOutputValueClass())) {
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job.setReducerClass(KeyValueSortReducer.class);
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} else if (Put.class.equals(job.getMapOutputValueClass())) {
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job.setReducerClass(PutSortReducer.class);
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|
||||||
} else if (Text.class.equals(job.getMapOutputValueClass())) {
|
|
||||||
job.setReducerClass(TextSortReducer.class);
|
|
||||||
} else {
|
|
||||||
LOG.warn("Unknown map output value type:" + job.getMapOutputValueClass());
|
|
||||||
}
|
|
||||||
|
|
||||||
conf.setStrings("io.serializations", conf.get("io.serializations"),
|
|
||||||
MutationSerialization.class.getName(), ResultSerialization.class.getName(),
|
|
||||||
KeyValueSerialization.class.getName());
|
|
||||||
|
|
||||||
// Use table's region boundaries for TOP split points.
|
|
||||||
LOG.info("Looking up current regions for table " + Bytes.toString(table.getTableName()));
|
|
||||||
List<ImmutableBytesWritable> startKeys = getRegionStartKeys(table);
|
|
||||||
LOG.info("Configuring " + startKeys.size() + " reduce partitions " +
|
|
||||||
"to match current region count");
|
|
||||||
job.setNumReduceTasks(startKeys.size());
|
|
||||||
|
|
||||||
configurePartitioner(job, startKeys);
|
|
||||||
// Set compression algorithms based on column families
|
|
||||||
configureCompression(table, conf);
|
|
||||||
configureBloomType(table, conf);
|
|
||||||
configureBlockSize(table, conf);
|
|
||||||
configureDataBlockEncoding(table, conf);
|
|
||||||
|
|
||||||
TableMapReduceUtil.addDependencyJars(job);
|
|
||||||
TableMapReduceUtil.initCredentials(job);
|
|
||||||
LOG.info("Incremental table " + Bytes.toString(table.getTableName()) + " output configured.");
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -389,16 +98,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static Map<byte[], Algorithm> createFamilyCompressionMap(Configuration
|
static Map<byte[], Algorithm> createFamilyCompressionMap(Configuration
|
||||||
conf) {
|
conf) {
|
||||||
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
return HFileOutputFormat2.createFamilyCompressionMap(conf);
|
||||||
COMPRESSION_FAMILIES_CONF_KEY);
|
|
||||||
Map<byte[], Algorithm> compressionMap = new TreeMap<byte[],
|
|
||||||
Algorithm>(Bytes.BYTES_COMPARATOR);
|
|
||||||
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
|
||||||
Algorithm algorithm = AbstractHFileWriter.compressionByName
|
|
||||||
(e.getValue());
|
|
||||||
compressionMap.put(e.getKey(), algorithm);
|
|
||||||
}
|
|
||||||
return compressionMap;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -410,15 +110,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
*/
|
*/
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static Map<byte[], BloomType> createFamilyBloomTypeMap(Configuration conf) {
|
static Map<byte[], BloomType> createFamilyBloomTypeMap(Configuration conf) {
|
||||||
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
return HFileOutputFormat2.createFamilyBloomTypeMap(conf);
|
||||||
BLOOM_TYPE_FAMILIES_CONF_KEY);
|
|
||||||
Map<byte[], BloomType> bloomTypeMap = new TreeMap<byte[],
|
|
||||||
BloomType>(Bytes.BYTES_COMPARATOR);
|
|
||||||
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
|
||||||
BloomType bloomType = BloomType.valueOf(e.getValue());
|
|
||||||
bloomTypeMap.put(e.getKey(), bloomType);
|
|
||||||
}
|
|
||||||
return bloomTypeMap;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -430,15 +122,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
*/
|
*/
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static Map<byte[], Integer> createFamilyBlockSizeMap(Configuration conf) {
|
static Map<byte[], Integer> createFamilyBlockSizeMap(Configuration conf) {
|
||||||
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
return HFileOutputFormat2.createFamilyBlockSizeMap(conf);
|
||||||
BLOCK_SIZE_FAMILIES_CONF_KEY);
|
|
||||||
Map<byte[], Integer> blockSizeMap = new TreeMap<byte[],
|
|
||||||
Integer>(Bytes.BYTES_COMPARATOR);
|
|
||||||
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
|
||||||
Integer blockSize = Integer.parseInt(e.getValue());
|
|
||||||
blockSizeMap.put(e.getKey(), blockSize);
|
|
||||||
}
|
|
||||||
return blockSizeMap;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -452,41 +136,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static Map<byte[], DataBlockEncoding> createFamilyDataBlockEncodingMap(
|
static Map<byte[], DataBlockEncoding> createFamilyDataBlockEncodingMap(
|
||||||
Configuration conf) {
|
Configuration conf) {
|
||||||
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
return HFileOutputFormat2.createFamilyDataBlockEncodingMap(conf);
|
||||||
DATABLOCK_ENCODING_FAMILIES_CONF_KEY);
|
|
||||||
Map<byte[], DataBlockEncoding> encoderMap = new TreeMap<byte[],
|
|
||||||
DataBlockEncoding>(Bytes.BYTES_COMPARATOR);
|
|
||||||
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
|
||||||
encoderMap.put(e.getKey(), DataBlockEncoding.valueOf((e.getValue())));
|
|
||||||
}
|
|
||||||
return encoderMap;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
/**
|
|
||||||
* Run inside the task to deserialize column family to given conf value map.
|
|
||||||
*
|
|
||||||
* @param conf to read the serialized values from
|
|
||||||
* @param confName conf key to read from the configuration
|
|
||||||
* @return a map of column family to the given configuration value
|
|
||||||
*/
|
|
||||||
private static Map<byte[], String> createFamilyConfValueMap(Configuration conf, String confName) {
|
|
||||||
Map<byte[], String> confValMap = new TreeMap<byte[], String>(Bytes.BYTES_COMPARATOR);
|
|
||||||
String confVal = conf.get(confName, "");
|
|
||||||
for (String familyConf : confVal.split("&")) {
|
|
||||||
String[] familySplit = familyConf.split("=");
|
|
||||||
if (familySplit.length != 2) {
|
|
||||||
continue;
|
|
||||||
}
|
|
||||||
try {
|
|
||||||
confValMap.put(URLDecoder.decode(familySplit[0], "UTF-8").getBytes(),
|
|
||||||
URLDecoder.decode(familySplit[1], "UTF-8"));
|
|
||||||
} catch (UnsupportedEncodingException e) {
|
|
||||||
// will not happen with UTF-8 encoding
|
|
||||||
throw new AssertionError(e);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return confValMap;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -495,17 +145,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
*/
|
*/
|
||||||
static void configurePartitioner(Job job, List<ImmutableBytesWritable> splitPoints)
|
static void configurePartitioner(Job job, List<ImmutableBytesWritable> splitPoints)
|
||||||
throws IOException {
|
throws IOException {
|
||||||
|
HFileOutputFormat2.configurePartitioner(job, splitPoints);
|
||||||
// create the partitions file
|
|
||||||
FileSystem fs = FileSystem.get(job.getConfiguration());
|
|
||||||
Path partitionsPath = new Path("/tmp", "partitions_" + UUID.randomUUID());
|
|
||||||
fs.makeQualified(partitionsPath);
|
|
||||||
fs.deleteOnExit(partitionsPath);
|
|
||||||
writePartitions(job.getConfiguration(), partitionsPath, splitPoints);
|
|
||||||
|
|
||||||
// configure job to use it
|
|
||||||
job.setPartitionerClass(TotalOrderPartitioner.class);
|
|
||||||
TotalOrderPartitioner.setPartitionFile(job.getConfiguration(), partitionsPath);
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -521,24 +161,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
value="RCN_REDUNDANT_NULLCHECK_OF_NONNULL_VALUE")
|
value="RCN_REDUNDANT_NULLCHECK_OF_NONNULL_VALUE")
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static void configureCompression(HTable table, Configuration conf) throws IOException {
|
static void configureCompression(HTable table, Configuration conf) throws IOException {
|
||||||
StringBuilder compressionConfigValue = new StringBuilder();
|
HFileOutputFormat2.configureCompression(table, conf);
|
||||||
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
|
||||||
if(tableDescriptor == null){
|
|
||||||
// could happen with mock table instance
|
|
||||||
return;
|
|
||||||
}
|
|
||||||
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
|
||||||
int i = 0;
|
|
||||||
for (HColumnDescriptor familyDescriptor : families) {
|
|
||||||
if (i++ > 0) {
|
|
||||||
compressionConfigValue.append('&');
|
|
||||||
}
|
|
||||||
compressionConfigValue.append(URLEncoder.encode(familyDescriptor.getNameAsString(), "UTF-8"));
|
|
||||||
compressionConfigValue.append('=');
|
|
||||||
compressionConfigValue.append(URLEncoder.encode(familyDescriptor.getCompression().getName(), "UTF-8"));
|
|
||||||
}
|
|
||||||
// Get rid of the last ampersand
|
|
||||||
conf.set(COMPRESSION_FAMILIES_CONF_KEY, compressionConfigValue.toString());
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -552,26 +175,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
*/
|
*/
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static void configureBlockSize(HTable table, Configuration conf) throws IOException {
|
static void configureBlockSize(HTable table, Configuration conf) throws IOException {
|
||||||
StringBuilder blockSizeConfigValue = new StringBuilder();
|
HFileOutputFormat2.configureBlockSize(table, conf);
|
||||||
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
|
||||||
if (tableDescriptor == null) {
|
|
||||||
// could happen with mock table instance
|
|
||||||
return;
|
|
||||||
}
|
|
||||||
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
|
||||||
int i = 0;
|
|
||||||
for (HColumnDescriptor familyDescriptor : families) {
|
|
||||||
if (i++ > 0) {
|
|
||||||
blockSizeConfigValue.append('&');
|
|
||||||
}
|
|
||||||
blockSizeConfigValue.append(URLEncoder.encode(
|
|
||||||
familyDescriptor.getNameAsString(), "UTF-8"));
|
|
||||||
blockSizeConfigValue.append('=');
|
|
||||||
blockSizeConfigValue.append(URLEncoder.encode(
|
|
||||||
String.valueOf(familyDescriptor.getBlocksize()), "UTF-8"));
|
|
||||||
}
|
|
||||||
// Get rid of the last ampersand
|
|
||||||
conf.set(BLOCK_SIZE_FAMILIES_CONF_KEY, blockSizeConfigValue.toString());
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -585,27 +189,7 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
*/
|
*/
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static void configureBloomType(HTable table, Configuration conf) throws IOException {
|
static void configureBloomType(HTable table, Configuration conf) throws IOException {
|
||||||
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
HFileOutputFormat2.configureBloomType(table, conf);
|
||||||
if (tableDescriptor == null) {
|
|
||||||
// could happen with mock table instance
|
|
||||||
return;
|
|
||||||
}
|
|
||||||
StringBuilder bloomTypeConfigValue = new StringBuilder();
|
|
||||||
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
|
||||||
int i = 0;
|
|
||||||
for (HColumnDescriptor familyDescriptor : families) {
|
|
||||||
if (i++ > 0) {
|
|
||||||
bloomTypeConfigValue.append('&');
|
|
||||||
}
|
|
||||||
bloomTypeConfigValue.append(URLEncoder.encode(familyDescriptor.getNameAsString(), "UTF-8"));
|
|
||||||
bloomTypeConfigValue.append('=');
|
|
||||||
String bloomType = familyDescriptor.getBloomFilterType().toString();
|
|
||||||
if (bloomType == null) {
|
|
||||||
bloomType = HColumnDescriptor.DEFAULT_BLOOMFILTER;
|
|
||||||
}
|
|
||||||
bloomTypeConfigValue.append(URLEncoder.encode(bloomType, "UTF-8"));
|
|
||||||
}
|
|
||||||
conf.set(BLOOM_TYPE_FAMILIES_CONF_KEY, bloomTypeConfigValue.toString());
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
|
|
@ -620,29 +204,6 @@ public class HFileOutputFormat extends FileOutputFormat<ImmutableBytesWritable,
|
||||||
@VisibleForTesting
|
@VisibleForTesting
|
||||||
static void configureDataBlockEncoding(HTable table,
|
static void configureDataBlockEncoding(HTable table,
|
||||||
Configuration conf) throws IOException {
|
Configuration conf) throws IOException {
|
||||||
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
HFileOutputFormat2.configureDataBlockEncoding(table, conf);
|
||||||
if (tableDescriptor == null) {
|
|
||||||
// could happen with mock table instance
|
|
||||||
return;
|
|
||||||
}
|
|
||||||
StringBuilder dataBlockEncodingConfigValue = new StringBuilder();
|
|
||||||
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
|
||||||
int i = 0;
|
|
||||||
for (HColumnDescriptor familyDescriptor : families) {
|
|
||||||
if (i++ > 0) {
|
|
||||||
dataBlockEncodingConfigValue.append('&');
|
|
||||||
}
|
|
||||||
dataBlockEncodingConfigValue.append(
|
|
||||||
URLEncoder.encode(familyDescriptor.getNameAsString(), "UTF-8"));
|
|
||||||
dataBlockEncodingConfigValue.append('=');
|
|
||||||
DataBlockEncoding encoding = familyDescriptor.getDataBlockEncoding();
|
|
||||||
if (encoding == null) {
|
|
||||||
encoding = DataBlockEncoding.NONE;
|
|
||||||
}
|
|
||||||
dataBlockEncodingConfigValue.append(URLEncoder.encode(encoding.toString(),
|
|
||||||
"UTF-8"));
|
|
||||||
}
|
|
||||||
conf.set(DATABLOCK_ENCODING_FAMILIES_CONF_KEY,
|
|
||||||
dataBlockEncodingConfigValue.toString());
|
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
|
||||||
|
|
@ -0,0 +1,677 @@
|
||||||
|
/**
|
||||||
|
* Licensed to the Apache Software Foundation (ASF) under one
|
||||||
|
* or more contributor license agreements. See the NOTICE file
|
||||||
|
* distributed with this work for additional information
|
||||||
|
* regarding copyright ownership. The ASF licenses this file
|
||||||
|
* to you under the Apache License, Version 2.0 (the
|
||||||
|
* "License"); you may not use this file except in compliance
|
||||||
|
* with the License. You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
*/
|
||||||
|
package org.apache.hadoop.hbase.mapreduce;
|
||||||
|
|
||||||
|
import java.io.IOException;
|
||||||
|
import java.io.UnsupportedEncodingException;
|
||||||
|
import java.net.URLDecoder;
|
||||||
|
import java.net.URLEncoder;
|
||||||
|
import java.util.ArrayList;
|
||||||
|
import java.util.Collection;
|
||||||
|
import java.util.List;
|
||||||
|
import java.util.Map;
|
||||||
|
import java.util.TreeMap;
|
||||||
|
import java.util.TreeSet;
|
||||||
|
import java.util.UUID;
|
||||||
|
|
||||||
|
import org.apache.commons.logging.Log;
|
||||||
|
import org.apache.commons.logging.LogFactory;
|
||||||
|
import org.apache.hadoop.classification.InterfaceAudience;
|
||||||
|
import org.apache.hadoop.classification.InterfaceStability;
|
||||||
|
import org.apache.hadoop.conf.Configuration;
|
||||||
|
import org.apache.hadoop.fs.FileSystem;
|
||||||
|
import org.apache.hadoop.fs.Path;
|
||||||
|
import org.apache.hadoop.hbase.Cell;
|
||||||
|
import org.apache.hadoop.hbase.CellUtil;
|
||||||
|
import org.apache.hadoop.hbase.HColumnDescriptor;
|
||||||
|
import org.apache.hadoop.hbase.HConstants;
|
||||||
|
import org.apache.hadoop.hbase.HTableDescriptor;
|
||||||
|
import org.apache.hadoop.hbase.KeyValue;
|
||||||
|
import org.apache.hadoop.hbase.KeyValueUtil;
|
||||||
|
import org.apache.hadoop.hbase.client.HTable;
|
||||||
|
import org.apache.hadoop.hbase.client.Put;
|
||||||
|
import org.apache.hadoop.hbase.io.ImmutableBytesWritable;
|
||||||
|
import org.apache.hadoop.hbase.io.compress.Compression;
|
||||||
|
import org.apache.hadoop.hbase.io.compress.Compression.Algorithm;
|
||||||
|
import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
|
||||||
|
import org.apache.hadoop.hbase.io.hfile.AbstractHFileWriter;
|
||||||
|
import org.apache.hadoop.hbase.io.hfile.CacheConfig;
|
||||||
|
import org.apache.hadoop.hbase.io.hfile.HFileContext;
|
||||||
|
import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
|
||||||
|
import org.apache.hadoop.hbase.regionserver.BloomType;
|
||||||
|
import org.apache.hadoop.hbase.regionserver.HStore;
|
||||||
|
import org.apache.hadoop.hbase.regionserver.StoreFile;
|
||||||
|
import org.apache.hadoop.hbase.util.Bytes;
|
||||||
|
import org.apache.hadoop.io.NullWritable;
|
||||||
|
import org.apache.hadoop.io.SequenceFile;
|
||||||
|
import org.apache.hadoop.io.Text;
|
||||||
|
import org.apache.hadoop.mapreduce.Job;
|
||||||
|
import org.apache.hadoop.mapreduce.OutputFormat;
|
||||||
|
import org.apache.hadoop.mapreduce.RecordWriter;
|
||||||
|
import org.apache.hadoop.mapreduce.TaskAttemptContext;
|
||||||
|
import org.apache.hadoop.mapreduce.lib.output.FileOutputCommitter;
|
||||||
|
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
|
||||||
|
import org.apache.hadoop.mapreduce.lib.partition.TotalOrderPartitioner;
|
||||||
|
|
||||||
|
import com.google.common.annotations.VisibleForTesting;
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Writes HFiles. Passed Cells must arrive in order.
|
||||||
|
* Writes current time as the sequence id for the file. Sets the major compacted
|
||||||
|
* attribute on created hfiles. Calling write(null,null) will forcibly roll
|
||||||
|
* all HFiles being written.
|
||||||
|
* <p>
|
||||||
|
* Using this class as part of a MapReduce job is best done
|
||||||
|
* using {@link #configureIncrementalLoad(Job, HTable)}.
|
||||||
|
*/
|
||||||
|
@InterfaceAudience.Public
|
||||||
|
@InterfaceStability.Evolving
|
||||||
|
public class HFileOutputFormat2
|
||||||
|
extends FileOutputFormat<ImmutableBytesWritable, Cell> {
|
||||||
|
static Log LOG = LogFactory.getLog(HFileOutputFormat2.class);
|
||||||
|
|
||||||
|
// The following constants are private since these are used by
|
||||||
|
// HFileOutputFormat2 to internally transfer data between job setup and
|
||||||
|
// reducer run using conf.
|
||||||
|
// These should not be changed by the client.
|
||||||
|
private static final String COMPRESSION_FAMILIES_CONF_KEY =
|
||||||
|
"hbase.hfileoutputformat.families.compression";
|
||||||
|
private static final String BLOOM_TYPE_FAMILIES_CONF_KEY =
|
||||||
|
"hbase.hfileoutputformat.families.bloomtype";
|
||||||
|
private static final String BLOCK_SIZE_FAMILIES_CONF_KEY =
|
||||||
|
"hbase.mapreduce.hfileoutputformat.blocksize";
|
||||||
|
private static final String DATABLOCK_ENCODING_FAMILIES_CONF_KEY =
|
||||||
|
"hbase.mapreduce.hfileoutputformat.families.datablock.encoding";
|
||||||
|
|
||||||
|
// This constant is public since the client can modify this when setting
|
||||||
|
// up their conf object and thus refer to this symbol.
|
||||||
|
// It is present for backwards compatibility reasons. Use it only to
|
||||||
|
// override the auto-detection of datablock encoding.
|
||||||
|
public static final String DATABLOCK_ENCODING_OVERRIDE_CONF_KEY =
|
||||||
|
"hbase.mapreduce.hfileoutputformat.datablock.encoding";
|
||||||
|
|
||||||
|
public RecordWriter<ImmutableBytesWritable, Cell> getRecordWriter(
|
||||||
|
final TaskAttemptContext context) throws IOException, InterruptedException {
|
||||||
|
return createRecordWriter(context);
|
||||||
|
}
|
||||||
|
|
||||||
|
static <V extends Cell> RecordWriter<ImmutableBytesWritable, V>
|
||||||
|
createRecordWriter(final TaskAttemptContext context)
|
||||||
|
throws IOException, InterruptedException {
|
||||||
|
|
||||||
|
// Get the path of the temporary output file
|
||||||
|
final Path outputPath = FileOutputFormat.getOutputPath(context);
|
||||||
|
final Path outputdir = new FileOutputCommitter(outputPath, context).getWorkPath();
|
||||||
|
final Configuration conf = context.getConfiguration();
|
||||||
|
final FileSystem fs = outputdir.getFileSystem(conf);
|
||||||
|
// These configs. are from hbase-*.xml
|
||||||
|
final long maxsize = conf.getLong(HConstants.HREGION_MAX_FILESIZE,
|
||||||
|
HConstants.DEFAULT_MAX_FILE_SIZE);
|
||||||
|
// Invented config. Add to hbase-*.xml if other than default compression.
|
||||||
|
final String defaultCompressionStr = conf.get("hfile.compression",
|
||||||
|
Compression.Algorithm.NONE.getName());
|
||||||
|
final Algorithm defaultCompression = AbstractHFileWriter
|
||||||
|
.compressionByName(defaultCompressionStr);
|
||||||
|
final boolean compactionExclude = conf.getBoolean(
|
||||||
|
"hbase.mapreduce.hfileoutputformat.compaction.exclude", false);
|
||||||
|
|
||||||
|
// create a map from column family to the compression algorithm
|
||||||
|
final Map<byte[], Algorithm> compressionMap = createFamilyCompressionMap(conf);
|
||||||
|
final Map<byte[], BloomType> bloomTypeMap = createFamilyBloomTypeMap(conf);
|
||||||
|
final Map<byte[], Integer> blockSizeMap = createFamilyBlockSizeMap(conf);
|
||||||
|
|
||||||
|
String dataBlockEncodingStr = conf.get(DATABLOCK_ENCODING_OVERRIDE_CONF_KEY);
|
||||||
|
final Map<byte[], DataBlockEncoding> datablockEncodingMap
|
||||||
|
= createFamilyDataBlockEncodingMap(conf);
|
||||||
|
final DataBlockEncoding overriddenEncoding;
|
||||||
|
if (dataBlockEncodingStr != null) {
|
||||||
|
overriddenEncoding = DataBlockEncoding.valueOf(dataBlockEncodingStr);
|
||||||
|
} else {
|
||||||
|
overriddenEncoding = null;
|
||||||
|
}
|
||||||
|
|
||||||
|
return new RecordWriter<ImmutableBytesWritable, V>() {
|
||||||
|
// Map of families to writers and how much has been output on the writer.
|
||||||
|
private final Map<byte [], WriterLength> writers =
|
||||||
|
new TreeMap<byte [], WriterLength>(Bytes.BYTES_COMPARATOR);
|
||||||
|
private byte [] previousRow = HConstants.EMPTY_BYTE_ARRAY;
|
||||||
|
private final byte [] now = Bytes.toBytes(System.currentTimeMillis());
|
||||||
|
private boolean rollRequested = false;
|
||||||
|
|
||||||
|
public void write(ImmutableBytesWritable row, V cell)
|
||||||
|
throws IOException {
|
||||||
|
KeyValue kv = KeyValueUtil.ensureKeyValue(cell);
|
||||||
|
|
||||||
|
// null input == user explicitly wants to flush
|
||||||
|
if (row == null && kv == null) {
|
||||||
|
rollWriters();
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
|
||||||
|
byte [] rowKey = CellUtil.cloneRow(kv);
|
||||||
|
long length = kv.getLength();
|
||||||
|
byte [] family = CellUtil.cloneFamily(kv);
|
||||||
|
WriterLength wl = this.writers.get(family);
|
||||||
|
|
||||||
|
// If this is a new column family, verify that the directory exists
|
||||||
|
if (wl == null) {
|
||||||
|
fs.mkdirs(new Path(outputdir, Bytes.toString(family)));
|
||||||
|
}
|
||||||
|
|
||||||
|
// If any of the HFiles for the column families has reached
|
||||||
|
// maxsize, we need to roll all the writers
|
||||||
|
if (wl != null && wl.written + length >= maxsize) {
|
||||||
|
this.rollRequested = true;
|
||||||
|
}
|
||||||
|
|
||||||
|
// This can only happen once a row is finished though
|
||||||
|
if (rollRequested && Bytes.compareTo(this.previousRow, rowKey) != 0) {
|
||||||
|
rollWriters();
|
||||||
|
}
|
||||||
|
|
||||||
|
// create a new HLog writer, if necessary
|
||||||
|
if (wl == null || wl.writer == null) {
|
||||||
|
wl = getNewWriter(family, conf);
|
||||||
|
}
|
||||||
|
|
||||||
|
// we now have the proper HLog writer. full steam ahead
|
||||||
|
kv.updateLatestStamp(this.now);
|
||||||
|
wl.writer.append(kv);
|
||||||
|
wl.written += length;
|
||||||
|
|
||||||
|
// Copy the row so we know when a row transition.
|
||||||
|
this.previousRow = rowKey;
|
||||||
|
}
|
||||||
|
|
||||||
|
private void rollWriters() throws IOException {
|
||||||
|
for (WriterLength wl : this.writers.values()) {
|
||||||
|
if (wl.writer != null) {
|
||||||
|
LOG.info("Writer=" + wl.writer.getPath() +
|
||||||
|
((wl.written == 0)? "": ", wrote=" + wl.written));
|
||||||
|
close(wl.writer);
|
||||||
|
}
|
||||||
|
wl.writer = null;
|
||||||
|
wl.written = 0;
|
||||||
|
}
|
||||||
|
this.rollRequested = false;
|
||||||
|
}
|
||||||
|
|
||||||
|
/* Create a new StoreFile.Writer.
|
||||||
|
* @param family
|
||||||
|
* @return A WriterLength, containing a new StoreFile.Writer.
|
||||||
|
* @throws IOException
|
||||||
|
*/
|
||||||
|
private WriterLength getNewWriter(byte[] family, Configuration conf)
|
||||||
|
throws IOException {
|
||||||
|
WriterLength wl = new WriterLength();
|
||||||
|
Path familydir = new Path(outputdir, Bytes.toString(family));
|
||||||
|
Algorithm compression = compressionMap.get(family);
|
||||||
|
compression = compression == null ? defaultCompression : compression;
|
||||||
|
BloomType bloomType = bloomTypeMap.get(family);
|
||||||
|
bloomType = bloomType == null ? BloomType.NONE : bloomType;
|
||||||
|
Integer blockSize = blockSizeMap.get(family);
|
||||||
|
blockSize = blockSize == null ? HConstants.DEFAULT_BLOCKSIZE : blockSize;
|
||||||
|
DataBlockEncoding encoding = overriddenEncoding;
|
||||||
|
encoding = encoding == null ? datablockEncodingMap.get(family) : encoding;
|
||||||
|
encoding = encoding == null ? DataBlockEncoding.NONE : encoding;
|
||||||
|
Configuration tempConf = new Configuration(conf);
|
||||||
|
tempConf.setFloat(HConstants.HFILE_BLOCK_CACHE_SIZE_KEY, 0.0f);
|
||||||
|
HFileContextBuilder contextBuilder = new HFileContextBuilder()
|
||||||
|
.withCompression(compression)
|
||||||
|
.withChecksumType(HStore.getChecksumType(conf))
|
||||||
|
.withBytesPerCheckSum(HStore.getBytesPerChecksum(conf))
|
||||||
|
.withBlockSize(blockSize);
|
||||||
|
contextBuilder.withDataBlockEncoding(encoding);
|
||||||
|
HFileContext hFileContext = contextBuilder.build();
|
||||||
|
|
||||||
|
wl.writer = new StoreFile.WriterBuilder(conf, new CacheConfig(tempConf), fs)
|
||||||
|
.withOutputDir(familydir).withBloomType(bloomType)
|
||||||
|
.withComparator(KeyValue.COMPARATOR)
|
||||||
|
.withFileContext(hFileContext).build();
|
||||||
|
|
||||||
|
this.writers.put(family, wl);
|
||||||
|
return wl;
|
||||||
|
}
|
||||||
|
|
||||||
|
private void close(final StoreFile.Writer w) throws IOException {
|
||||||
|
if (w != null) {
|
||||||
|
w.appendFileInfo(StoreFile.BULKLOAD_TIME_KEY,
|
||||||
|
Bytes.toBytes(System.currentTimeMillis()));
|
||||||
|
w.appendFileInfo(StoreFile.BULKLOAD_TASK_KEY,
|
||||||
|
Bytes.toBytes(context.getTaskAttemptID().toString()));
|
||||||
|
w.appendFileInfo(StoreFile.MAJOR_COMPACTION_KEY,
|
||||||
|
Bytes.toBytes(true));
|
||||||
|
w.appendFileInfo(StoreFile.EXCLUDE_FROM_MINOR_COMPACTION_KEY,
|
||||||
|
Bytes.toBytes(compactionExclude));
|
||||||
|
w.appendTrackedTimestampsToMetadata();
|
||||||
|
w.close();
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
public void close(TaskAttemptContext c)
|
||||||
|
throws IOException, InterruptedException {
|
||||||
|
for (WriterLength wl: this.writers.values()) {
|
||||||
|
close(wl.writer);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
};
|
||||||
|
}
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Data structure to hold a Writer and amount of data written on it.
|
||||||
|
*/
|
||||||
|
static class WriterLength {
|
||||||
|
long written = 0;
|
||||||
|
StoreFile.Writer writer = null;
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Return the start keys of all of the regions in this table,
|
||||||
|
* as a list of ImmutableBytesWritable.
|
||||||
|
*/
|
||||||
|
private static List<ImmutableBytesWritable> getRegionStartKeys(HTable table)
|
||||||
|
throws IOException {
|
||||||
|
byte[][] byteKeys = table.getStartKeys();
|
||||||
|
ArrayList<ImmutableBytesWritable> ret =
|
||||||
|
new ArrayList<ImmutableBytesWritable>(byteKeys.length);
|
||||||
|
for (byte[] byteKey : byteKeys) {
|
||||||
|
ret.add(new ImmutableBytesWritable(byteKey));
|
||||||
|
}
|
||||||
|
return ret;
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Write out a {@link SequenceFile} that can be read by
|
||||||
|
* {@link TotalOrderPartitioner} that contains the split points in startKeys.
|
||||||
|
*/
|
||||||
|
@SuppressWarnings("deprecation")
|
||||||
|
private static void writePartitions(Configuration conf, Path partitionsPath,
|
||||||
|
List<ImmutableBytesWritable> startKeys) throws IOException {
|
||||||
|
LOG.info("Writing partition information to " + partitionsPath);
|
||||||
|
if (startKeys.isEmpty()) {
|
||||||
|
throw new IllegalArgumentException("No regions passed");
|
||||||
|
}
|
||||||
|
|
||||||
|
// We're generating a list of split points, and we don't ever
|
||||||
|
// have keys < the first region (which has an empty start key)
|
||||||
|
// so we need to remove it. Otherwise we would end up with an
|
||||||
|
// empty reducer with index 0
|
||||||
|
TreeSet<ImmutableBytesWritable> sorted =
|
||||||
|
new TreeSet<ImmutableBytesWritable>(startKeys);
|
||||||
|
|
||||||
|
ImmutableBytesWritable first = sorted.first();
|
||||||
|
if (!first.equals(HConstants.EMPTY_BYTE_ARRAY)) {
|
||||||
|
throw new IllegalArgumentException(
|
||||||
|
"First region of table should have empty start key. Instead has: "
|
||||||
|
+ Bytes.toStringBinary(first.get()));
|
||||||
|
}
|
||||||
|
sorted.remove(first);
|
||||||
|
|
||||||
|
// Write the actual file
|
||||||
|
FileSystem fs = partitionsPath.getFileSystem(conf);
|
||||||
|
SequenceFile.Writer writer = SequenceFile.createWriter(
|
||||||
|
fs, conf, partitionsPath, ImmutableBytesWritable.class,
|
||||||
|
NullWritable.class);
|
||||||
|
|
||||||
|
try {
|
||||||
|
for (ImmutableBytesWritable startKey : sorted) {
|
||||||
|
writer.append(startKey, NullWritable.get());
|
||||||
|
}
|
||||||
|
} finally {
|
||||||
|
writer.close();
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Configure a MapReduce Job to perform an incremental load into the given
|
||||||
|
* table. This
|
||||||
|
* <ul>
|
||||||
|
* <li>Inspects the table to configure a total order partitioner</li>
|
||||||
|
* <li>Uploads the partitions file to the cluster and adds it to the DistributedCache</li>
|
||||||
|
* <li>Sets the number of reduce tasks to match the current number of regions</li>
|
||||||
|
* <li>Sets the output key/value class to match HFileOutputFormat2's requirements</li>
|
||||||
|
* <li>Sets the reducer up to perform the appropriate sorting (either KeyValueSortReducer or
|
||||||
|
* PutSortReducer)</li>
|
||||||
|
* </ul>
|
||||||
|
* The user should be sure to set the map output value class to either KeyValue or Put before
|
||||||
|
* running this function.
|
||||||
|
*/
|
||||||
|
public static void configureIncrementalLoad(Job job, HTable table)
|
||||||
|
throws IOException {
|
||||||
|
configureIncrementalLoad(job, table, HFileOutputFormat2.class);
|
||||||
|
}
|
||||||
|
|
||||||
|
static void configureIncrementalLoad(Job job, HTable table,
|
||||||
|
Class<? extends OutputFormat<?, ?>> cls) throws IOException {
|
||||||
|
Configuration conf = job.getConfiguration();
|
||||||
|
|
||||||
|
job.setOutputKeyClass(ImmutableBytesWritable.class);
|
||||||
|
job.setOutputValueClass(KeyValue.class);
|
||||||
|
job.setOutputFormatClass(cls);
|
||||||
|
|
||||||
|
// Based on the configured map output class, set the correct reducer to properly
|
||||||
|
// sort the incoming values.
|
||||||
|
// TODO it would be nice to pick one or the other of these formats.
|
||||||
|
if (KeyValue.class.equals(job.getMapOutputValueClass())) {
|
||||||
|
job.setReducerClass(KeyValueSortReducer.class);
|
||||||
|
} else if (Put.class.equals(job.getMapOutputValueClass())) {
|
||||||
|
job.setReducerClass(PutSortReducer.class);
|
||||||
|
} else if (Text.class.equals(job.getMapOutputValueClass())) {
|
||||||
|
job.setReducerClass(TextSortReducer.class);
|
||||||
|
} else {
|
||||||
|
LOG.warn("Unknown map output value type:" + job.getMapOutputValueClass());
|
||||||
|
}
|
||||||
|
|
||||||
|
conf.setStrings("io.serializations", conf.get("io.serializations"),
|
||||||
|
MutationSerialization.class.getName(), ResultSerialization.class.getName(),
|
||||||
|
KeyValueSerialization.class.getName());
|
||||||
|
|
||||||
|
// Use table's region boundaries for TOP split points.
|
||||||
|
LOG.info("Looking up current regions for table " + Bytes.toString(table.getTableName()));
|
||||||
|
List<ImmutableBytesWritable> startKeys = getRegionStartKeys(table);
|
||||||
|
LOG.info("Configuring " + startKeys.size() + " reduce partitions " +
|
||||||
|
"to match current region count");
|
||||||
|
job.setNumReduceTasks(startKeys.size());
|
||||||
|
|
||||||
|
configurePartitioner(job, startKeys);
|
||||||
|
// Set compression algorithms based on column families
|
||||||
|
configureCompression(table, conf);
|
||||||
|
configureBloomType(table, conf);
|
||||||
|
configureBlockSize(table, conf);
|
||||||
|
configureDataBlockEncoding(table, conf);
|
||||||
|
|
||||||
|
TableMapReduceUtil.addDependencyJars(job);
|
||||||
|
TableMapReduceUtil.initCredentials(job);
|
||||||
|
LOG.info("Incremental table " + Bytes.toString(table.getTableName())
|
||||||
|
+ " output configured.");
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Runs inside the task to deserialize column family to compression algorithm
|
||||||
|
* map from the configuration.
|
||||||
|
*
|
||||||
|
* @param conf to read the serialized values from
|
||||||
|
* @return a map from column family to the configured compression algorithm
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static Map<byte[], Algorithm> createFamilyCompressionMap(Configuration
|
||||||
|
conf) {
|
||||||
|
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
||||||
|
COMPRESSION_FAMILIES_CONF_KEY);
|
||||||
|
Map<byte[], Algorithm> compressionMap = new TreeMap<byte[],
|
||||||
|
Algorithm>(Bytes.BYTES_COMPARATOR);
|
||||||
|
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
||||||
|
Algorithm algorithm = AbstractHFileWriter.compressionByName
|
||||||
|
(e.getValue());
|
||||||
|
compressionMap.put(e.getKey(), algorithm);
|
||||||
|
}
|
||||||
|
return compressionMap;
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Runs inside the task to deserialize column family to bloom filter type
|
||||||
|
* map from the configuration.
|
||||||
|
*
|
||||||
|
* @param conf to read the serialized values from
|
||||||
|
* @return a map from column family to the the configured bloom filter type
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static Map<byte[], BloomType> createFamilyBloomTypeMap(Configuration conf) {
|
||||||
|
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
||||||
|
BLOOM_TYPE_FAMILIES_CONF_KEY);
|
||||||
|
Map<byte[], BloomType> bloomTypeMap = new TreeMap<byte[],
|
||||||
|
BloomType>(Bytes.BYTES_COMPARATOR);
|
||||||
|
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
||||||
|
BloomType bloomType = BloomType.valueOf(e.getValue());
|
||||||
|
bloomTypeMap.put(e.getKey(), bloomType);
|
||||||
|
}
|
||||||
|
return bloomTypeMap;
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Runs inside the task to deserialize column family to block size
|
||||||
|
* map from the configuration.
|
||||||
|
*
|
||||||
|
* @param conf to read the serialized values from
|
||||||
|
* @return a map from column family to the configured block size
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static Map<byte[], Integer> createFamilyBlockSizeMap(Configuration conf) {
|
||||||
|
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
||||||
|
BLOCK_SIZE_FAMILIES_CONF_KEY);
|
||||||
|
Map<byte[], Integer> blockSizeMap = new TreeMap<byte[],
|
||||||
|
Integer>(Bytes.BYTES_COMPARATOR);
|
||||||
|
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
||||||
|
Integer blockSize = Integer.parseInt(e.getValue());
|
||||||
|
blockSizeMap.put(e.getKey(), blockSize);
|
||||||
|
}
|
||||||
|
return blockSizeMap;
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Runs inside the task to deserialize column family to data block encoding
|
||||||
|
* type map from the configuration.
|
||||||
|
*
|
||||||
|
* @param conf to read the serialized values from
|
||||||
|
* @return a map from column family to HFileDataBlockEncoder for the
|
||||||
|
* configured data block type for the family
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static Map<byte[], DataBlockEncoding> createFamilyDataBlockEncodingMap(
|
||||||
|
Configuration conf) {
|
||||||
|
Map<byte[], String> stringMap = createFamilyConfValueMap(conf,
|
||||||
|
DATABLOCK_ENCODING_FAMILIES_CONF_KEY);
|
||||||
|
Map<byte[], DataBlockEncoding> encoderMap = new TreeMap<byte[],
|
||||||
|
DataBlockEncoding>(Bytes.BYTES_COMPARATOR);
|
||||||
|
for (Map.Entry<byte[], String> e : stringMap.entrySet()) {
|
||||||
|
encoderMap.put(e.getKey(), DataBlockEncoding.valueOf((e.getValue())));
|
||||||
|
}
|
||||||
|
return encoderMap;
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Run inside the task to deserialize column family to given conf value map.
|
||||||
|
*
|
||||||
|
* @param conf to read the serialized values from
|
||||||
|
* @param confName conf key to read from the configuration
|
||||||
|
* @return a map of column family to the given configuration value
|
||||||
|
*/
|
||||||
|
private static Map<byte[], String> createFamilyConfValueMap(
|
||||||
|
Configuration conf, String confName) {
|
||||||
|
Map<byte[], String> confValMap = new TreeMap<byte[], String>(Bytes.BYTES_COMPARATOR);
|
||||||
|
String confVal = conf.get(confName, "");
|
||||||
|
for (String familyConf : confVal.split("&")) {
|
||||||
|
String[] familySplit = familyConf.split("=");
|
||||||
|
if (familySplit.length != 2) {
|
||||||
|
continue;
|
||||||
|
}
|
||||||
|
try {
|
||||||
|
confValMap.put(URLDecoder.decode(familySplit[0], "UTF-8").getBytes(),
|
||||||
|
URLDecoder.decode(familySplit[1], "UTF-8"));
|
||||||
|
} catch (UnsupportedEncodingException e) {
|
||||||
|
// will not happen with UTF-8 encoding
|
||||||
|
throw new AssertionError(e);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
return confValMap;
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Configure <code>job</code> with a TotalOrderPartitioner, partitioning against
|
||||||
|
* <code>splitPoints</code>. Cleans up the partitions file after job exists.
|
||||||
|
*/
|
||||||
|
static void configurePartitioner(Job job, List<ImmutableBytesWritable> splitPoints)
|
||||||
|
throws IOException {
|
||||||
|
|
||||||
|
// create the partitions file
|
||||||
|
FileSystem fs = FileSystem.get(job.getConfiguration());
|
||||||
|
Path partitionsPath = new Path("/tmp", "partitions_" + UUID.randomUUID());
|
||||||
|
fs.makeQualified(partitionsPath);
|
||||||
|
fs.deleteOnExit(partitionsPath);
|
||||||
|
writePartitions(job.getConfiguration(), partitionsPath, splitPoints);
|
||||||
|
|
||||||
|
// configure job to use it
|
||||||
|
job.setPartitionerClass(TotalOrderPartitioner.class);
|
||||||
|
TotalOrderPartitioner.setPartitionFile(job.getConfiguration(), partitionsPath);
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Serialize column family to compression algorithm map to configuration.
|
||||||
|
* Invoked while configuring the MR job for incremental load.
|
||||||
|
*
|
||||||
|
* @param table to read the properties from
|
||||||
|
* @param conf to persist serialized values into
|
||||||
|
* @throws IOException
|
||||||
|
* on failure to read column family descriptors
|
||||||
|
*/
|
||||||
|
@edu.umd.cs.findbugs.annotations.SuppressWarnings(
|
||||||
|
value="RCN_REDUNDANT_NULLCHECK_OF_NONNULL_VALUE")
|
||||||
|
@VisibleForTesting
|
||||||
|
static void configureCompression(
|
||||||
|
HTable table, Configuration conf) throws IOException {
|
||||||
|
StringBuilder compressionConfigValue = new StringBuilder();
|
||||||
|
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
||||||
|
if(tableDescriptor == null){
|
||||||
|
// could happen with mock table instance
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
||||||
|
int i = 0;
|
||||||
|
for (HColumnDescriptor familyDescriptor : families) {
|
||||||
|
if (i++ > 0) {
|
||||||
|
compressionConfigValue.append('&');
|
||||||
|
}
|
||||||
|
compressionConfigValue.append(URLEncoder.encode(
|
||||||
|
familyDescriptor.getNameAsString(), "UTF-8"));
|
||||||
|
compressionConfigValue.append('=');
|
||||||
|
compressionConfigValue.append(URLEncoder.encode(
|
||||||
|
familyDescriptor.getCompression().getName(), "UTF-8"));
|
||||||
|
}
|
||||||
|
// Get rid of the last ampersand
|
||||||
|
conf.set(COMPRESSION_FAMILIES_CONF_KEY, compressionConfigValue.toString());
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Serialize column family to block size map to configuration.
|
||||||
|
* Invoked while configuring the MR job for incremental load.
|
||||||
|
*
|
||||||
|
* @param table to read the properties from
|
||||||
|
* @param conf to persist serialized values into
|
||||||
|
* @throws IOException
|
||||||
|
* on failure to read column family descriptors
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static void configureBlockSize(
|
||||||
|
HTable table, Configuration conf) throws IOException {
|
||||||
|
StringBuilder blockSizeConfigValue = new StringBuilder();
|
||||||
|
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
||||||
|
if (tableDescriptor == null) {
|
||||||
|
// could happen with mock table instance
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
||||||
|
int i = 0;
|
||||||
|
for (HColumnDescriptor familyDescriptor : families) {
|
||||||
|
if (i++ > 0) {
|
||||||
|
blockSizeConfigValue.append('&');
|
||||||
|
}
|
||||||
|
blockSizeConfigValue.append(URLEncoder.encode(
|
||||||
|
familyDescriptor.getNameAsString(), "UTF-8"));
|
||||||
|
blockSizeConfigValue.append('=');
|
||||||
|
blockSizeConfigValue.append(URLEncoder.encode(
|
||||||
|
String.valueOf(familyDescriptor.getBlocksize()), "UTF-8"));
|
||||||
|
}
|
||||||
|
// Get rid of the last ampersand
|
||||||
|
conf.set(BLOCK_SIZE_FAMILIES_CONF_KEY, blockSizeConfigValue.toString());
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Serialize column family to bloom type map to configuration.
|
||||||
|
* Invoked while configuring the MR job for incremental load.
|
||||||
|
*
|
||||||
|
* @param table to read the properties from
|
||||||
|
* @param conf to persist serialized values into
|
||||||
|
* @throws IOException
|
||||||
|
* on failure to read column family descriptors
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static void configureBloomType(
|
||||||
|
HTable table, Configuration conf) throws IOException {
|
||||||
|
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
||||||
|
if (tableDescriptor == null) {
|
||||||
|
// could happen with mock table instance
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
StringBuilder bloomTypeConfigValue = new StringBuilder();
|
||||||
|
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
||||||
|
int i = 0;
|
||||||
|
for (HColumnDescriptor familyDescriptor : families) {
|
||||||
|
if (i++ > 0) {
|
||||||
|
bloomTypeConfigValue.append('&');
|
||||||
|
}
|
||||||
|
bloomTypeConfigValue.append(URLEncoder.encode(
|
||||||
|
familyDescriptor.getNameAsString(), "UTF-8"));
|
||||||
|
bloomTypeConfigValue.append('=');
|
||||||
|
String bloomType = familyDescriptor.getBloomFilterType().toString();
|
||||||
|
if (bloomType == null) {
|
||||||
|
bloomType = HColumnDescriptor.DEFAULT_BLOOMFILTER;
|
||||||
|
}
|
||||||
|
bloomTypeConfigValue.append(URLEncoder.encode(bloomType, "UTF-8"));
|
||||||
|
}
|
||||||
|
conf.set(BLOOM_TYPE_FAMILIES_CONF_KEY, bloomTypeConfigValue.toString());
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* Serialize column family to data block encoding map to configuration.
|
||||||
|
* Invoked while configuring the MR job for incremental load.
|
||||||
|
*
|
||||||
|
* @param table to read the properties from
|
||||||
|
* @param conf to persist serialized values into
|
||||||
|
* @throws IOException
|
||||||
|
* on failure to read column family descriptors
|
||||||
|
*/
|
||||||
|
@VisibleForTesting
|
||||||
|
static void configureDataBlockEncoding(HTable table,
|
||||||
|
Configuration conf) throws IOException {
|
||||||
|
HTableDescriptor tableDescriptor = table.getTableDescriptor();
|
||||||
|
if (tableDescriptor == null) {
|
||||||
|
// could happen with mock table instance
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
StringBuilder dataBlockEncodingConfigValue = new StringBuilder();
|
||||||
|
Collection<HColumnDescriptor> families = tableDescriptor.getFamilies();
|
||||||
|
int i = 0;
|
||||||
|
for (HColumnDescriptor familyDescriptor : families) {
|
||||||
|
if (i++ > 0) {
|
||||||
|
dataBlockEncodingConfigValue.append('&');
|
||||||
|
}
|
||||||
|
dataBlockEncodingConfigValue.append(
|
||||||
|
URLEncoder.encode(familyDescriptor.getNameAsString(), "UTF-8"));
|
||||||
|
dataBlockEncodingConfigValue.append('=');
|
||||||
|
DataBlockEncoding encoding = familyDescriptor.getDataBlockEncoding();
|
||||||
|
if (encoding == null) {
|
||||||
|
encoding = DataBlockEncoding.NONE;
|
||||||
|
}
|
||||||
|
dataBlockEncodingConfigValue.append(URLEncoder.encode(encoding.toString(),
|
||||||
|
"UTF-8"));
|
||||||
|
}
|
||||||
|
conf.set(DATABLOCK_ENCODING_FAMILIES_CONF_KEY,
|
||||||
|
dataBlockEncodingConfigValue.toString());
|
||||||
|
}
|
||||||
|
}
|
||||||
File diff suppressed because it is too large
Load Diff
Loading…
Reference in New Issue