HBASE-20940 HStore.cansplit should not allow split to happen if it has references (Vishal Khandelwal)
This commit is contained in:
Andrew Purtell
parent
f9793fafb7
commit
e8eb366514
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@ -1701,7 +1701,17 @@ public class HStore implements Store, HeapSize, StoreConfigInformation, Propagat
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@Override
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public boolean hasReferences() {
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return StoreUtils.hasReferences(this.storeEngine.getStoreFileManager().getStorefiles());
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List<HStoreFile> reloadedStoreFiles = null;
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try {
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// Reloading the store files from file system due to HBASE-20940. As split can happen with an
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// region which has references
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reloadedStoreFiles = loadStoreFiles();
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return StoreUtils.hasReferences(reloadedStoreFiles);
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} catch (IOException ioe) {
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LOG.error("Error trying to determine if store has references, assuming references exists",
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ioe);
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return true;
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}
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}
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/**
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@ -21,7 +21,6 @@ import static org.apache.hadoop.hbase.HConstants.HBASE_CLIENT_META_OPERATION_TIM
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import static org.apache.hadoop.hbase.master.LoadBalancer.TABLES_ON_MASTER;
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import static org.junit.Assert.assertEquals;
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import java.io.IOException;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.Collections;
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@ -35,18 +34,21 @@ import java.util.concurrent.TimeUnit;
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import java.util.concurrent.atomic.AtomicBoolean;
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import java.util.stream.Collectors;
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import java.util.stream.IntStream;
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import org.apache.commons.io.IOUtils;
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import org.apache.hadoop.hbase.HBaseClassTestRule;
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import org.apache.hadoop.hbase.HBaseTestingUtility;
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import org.apache.hadoop.hbase.MemoryCompactionPolicy;
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import org.apache.hadoop.hbase.ServerName;
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import org.apache.hadoop.hbase.TableName;
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import org.apache.hadoop.hbase.Waiter.ExplainingPredicate;
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import org.apache.hadoop.hbase.io.ByteBufferPool;
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import org.apache.hadoop.hbase.regionserver.CompactingMemStore;
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import org.apache.hadoop.hbase.regionserver.HRegion;
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import org.apache.hadoop.hbase.testclassification.ClientTests;
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import org.apache.hadoop.hbase.testclassification.LargeTests;
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import org.apache.hadoop.hbase.util.Bytes;
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import org.apache.hadoop.hbase.util.RetryCounter;
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import org.apache.hadoop.hbase.util.Threads;
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import org.junit.AfterClass;
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import org.junit.BeforeClass;
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@ -124,7 +126,7 @@ public class TestAsyncTableGetMultiThreaded {
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}
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@Test
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public void test() throws IOException, InterruptedException, ExecutionException {
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public void test() throws Exception {
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int numThreads = 20;
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AtomicBoolean stop = new AtomicBoolean(false);
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ExecutorService executor =
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@ -137,9 +139,31 @@ public class TestAsyncTableGetMultiThreaded {
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Collections.shuffle(Arrays.asList(SPLIT_KEYS), new Random(123));
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Admin admin = TEST_UTIL.getAdmin();
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for (byte[] splitPoint : SPLIT_KEYS) {
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int oldRegionCount = admin.getRegions(TABLE_NAME).size();
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admin.split(TABLE_NAME, splitPoint);
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TEST_UTIL.waitFor(30000, new ExplainingPredicate<Exception>() {
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@Override
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public boolean evaluate() throws Exception {
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return TEST_UTIL.getMiniHBaseCluster().getRegions(TABLE_NAME).size() > oldRegionCount;
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}
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@Override
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public String explainFailure() throws Exception {
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return "Split has not finished yet";
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}
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});
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for (HRegion region : TEST_UTIL.getHBaseCluster().getRegions(TABLE_NAME)) {
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region.compact(true);
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//Waiting for compaction to complete and references are cleaned up
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RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
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while (CompactionState.NONE != admin
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.getCompactionStateForRegion(region.getRegionInfo().getRegionName())
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&& retrier.shouldRetry()) {
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retrier.sleepUntilNextRetry();
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}
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region.getStores().get(0).closeAndArchiveCompactedFiles();
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}
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Thread.sleep(5000);
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admin.balance(true);
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@ -107,6 +107,10 @@ public class TestChangingEncoding {
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public static void setUpBeforeClass() throws Exception {
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// Use a small flush size to create more HFiles.
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conf.setInt(HConstants.HREGION_MEMSTORE_FLUSH_SIZE, 1024 * 1024);
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// Disabling split to make sure split does not cause modify column to wait which timesout test
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// sometime
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conf.set(HConstants.HBASE_REGION_SPLIT_POLICY_KEY,
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"org.apache.hadoop.hbase.regionserver.DisabledRegionSplitPolicy");
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// ((Log4JLogger)RpcServerImplementation.LOG).getLogger().setLevel(Level.TRACE);
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// ((Log4JLogger)RpcClient.LOG).getLogger().setLevel(Level.TRACE);
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TEST_UTIL.startMiniCluster();
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@ -48,7 +48,9 @@ import org.apache.hadoop.hbase.MiniHBaseCluster;
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import org.apache.hadoop.hbase.NamespaceDescriptor;
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import org.apache.hadoop.hbase.TableName;
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import org.apache.hadoop.hbase.Waiter;
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import org.apache.hadoop.hbase.Waiter.ExplainingPredicate;
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import org.apache.hadoop.hbase.client.Admin;
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import org.apache.hadoop.hbase.client.CompactionState;
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import org.apache.hadoop.hbase.client.Connection;
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import org.apache.hadoop.hbase.client.ConnectionFactory;
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import org.apache.hadoop.hbase.client.DoNotRetryRegionException;
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@ -81,6 +83,7 @@ import org.apache.hadoop.hbase.snapshot.RestoreSnapshotException;
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import org.apache.hadoop.hbase.testclassification.MediumTests;
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import org.apache.hadoop.hbase.util.Bytes;
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import org.apache.hadoop.hbase.util.FSUtils;
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import org.apache.hadoop.hbase.util.RetryCounter;
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import org.apache.hadoop.hbase.util.Threads;
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import org.apache.zookeeper.KeeperException;
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import org.junit.After;
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@ -365,6 +368,23 @@ public class TestNamespaceAuditor {
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HRegion regionToSplit = UTIL.getMiniHBaseCluster().getRegions(tableTwo).stream()
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.filter(r -> r.getRegionInfo().containsRow(splitKey)).findFirst().get();
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regionToSplit.compact(true);
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// Waiting for compaction to finish
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UTIL.waitFor(30000, new Waiter.Predicate<Exception>() {
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@Override
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public boolean evaluate() throws Exception {
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return (CompactionState.NONE == ADMIN
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.getCompactionStateForRegion(regionToSplit.getRegionInfo().getRegionName()));
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}
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});
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// Cleaning compacted references for split to proceed
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regionToSplit.getStores().stream().forEach(s -> {
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try {
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s.closeAndArchiveCompactedFiles();
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} catch (IOException e1) {
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LOG.error("Error whiling cleaning compacted file");
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}
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});
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// the above compact may quit immediately if there is a compaction ongoing, so here we need to
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// wait a while to let the ongoing compaction finish.
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UTIL.waitFor(10000, regionToSplit::isSplittable);
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@ -24,10 +24,13 @@ import static org.junit.Assert.assertTrue;
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import java.io.IOException;
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import java.util.ArrayList;
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import java.util.List;
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import java.util.Map;
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import java.util.Random;
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import java.util.Set;
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import java.util.TreeSet;
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import java.util.concurrent.TimeUnit;
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import java.util.stream.Collectors;
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import org.apache.commons.io.IOUtils;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.hbase.ChoreService;
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@ -41,6 +44,8 @@ import org.apache.hadoop.hbase.ScheduledChore;
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import org.apache.hadoop.hbase.Stoppable;
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import org.apache.hadoop.hbase.TableName;
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import org.apache.hadoop.hbase.client.Admin;
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import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
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import org.apache.hadoop.hbase.client.CompactionState;
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import org.apache.hadoop.hbase.client.Connection;
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import org.apache.hadoop.hbase.client.ConnectionFactory;
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import org.apache.hadoop.hbase.client.Get;
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@ -49,13 +54,19 @@ import org.apache.hadoop.hbase.client.RegionInfo;
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import org.apache.hadoop.hbase.client.RegionLocator;
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import org.apache.hadoop.hbase.client.Result;
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import org.apache.hadoop.hbase.client.Table;
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import org.apache.hadoop.hbase.client.TableDescriptor;
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import org.apache.hadoop.hbase.client.TableDescriptorBuilder;
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import org.apache.hadoop.hbase.testclassification.LargeTests;
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import org.apache.hadoop.hbase.util.Bytes;
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import org.apache.hadoop.hbase.util.Pair;
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import org.apache.hadoop.hbase.util.PairOfSameType;
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import org.apache.hadoop.hbase.util.RetryCounter;
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import org.apache.hadoop.hbase.util.StoppableImplementation;
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import org.apache.hadoop.hbase.util.Threads;
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import org.apache.hbase.thirdparty.com.google.common.collect.Iterators;
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import org.apache.hbase.thirdparty.com.google.common.collect.Maps;
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import org.junit.AfterClass;
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import org.junit.Assert;
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import org.junit.BeforeClass;
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import org.junit.ClassRule;
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import org.junit.Rule;
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@ -65,8 +76,6 @@ import org.junit.rules.TestName;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import org.apache.hbase.thirdparty.com.google.common.collect.Iterators;
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@Category(LargeTests.class)
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public class TestEndToEndSplitTransaction {
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@ -92,6 +101,78 @@ public class TestEndToEndSplitTransaction {
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TEST_UTIL.shutdownMiniCluster();
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}
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/*
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* This is the test for : HBASE-20940 This test will split the region and try to open an reference
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* over store file. Once store file has any reference, it makes sure that region can't be split
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* @throws Exception
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*/
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@Test
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public void testCanSplitJustAfterASplit() throws Exception {
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LOG.info("Starting testCanSplitJustAfterASplit");
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byte[] fam = Bytes.toBytes("cf_split");
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TableName tableName = TableName.valueOf("CanSplitTable");
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Table source = TEST_UTIL.getConnection().getTable(tableName);
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Admin admin = TEST_UTIL.getAdmin();
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Map<String, StoreFileReader> scanner = Maps.newHashMap();
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try {
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TableDescriptor htd = TableDescriptorBuilder.newBuilder(tableName)
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.setColumnFamily(ColumnFamilyDescriptorBuilder.of(fam)).build();
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admin.createTable(htd);
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TEST_UTIL.loadTable(source, fam);
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List<HRegion> regions = TEST_UTIL.getHBaseCluster().getRegions(tableName);
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regions.get(0).forceSplit(null);
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admin.split(tableName);
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while (regions.size() <= 1) {
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regions = TEST_UTIL.getHBaseCluster().getRegions(tableName);
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regions.stream()
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.forEach(r -> r.getStores().get(0).getStorefiles().stream()
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.filter(
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s -> s.isReference() && !scanner.containsKey(r.getRegionInfo().getEncodedName()))
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.forEach(sf -> {
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StoreFileReader reader = ((HStoreFile) sf).getReader();
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reader.getStoreFileScanner(true, false, false, 0, 0, false);
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scanner.put(r.getRegionInfo().getEncodedName(), reader);
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LOG.info("Got reference to file = " + sf.getPath() + ",for region = "
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+ r.getRegionInfo().getEncodedName());
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}));
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}
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Assert.assertTrue("Regions did not split properly", regions.size() > 1);
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Assert.assertTrue("Could not get reference any of the store file", scanner.size() > 1);
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RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
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while (CompactionState.NONE != admin.getCompactionState(tableName) && retrier.shouldRetry()) {
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retrier.sleepUntilNextRetry();
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}
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Assert.assertEquals("Compaction did not complete in 30 secs", CompactionState.NONE,
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admin.getCompactionState(tableName));
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regions.stream()
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.filter(region -> scanner.containsKey(region.getRegionInfo().getEncodedName()))
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.forEach(r -> Assert.assertTrue("Contains an open file reference which can be split",
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!r.getStores().get(0).canSplit()));
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} finally {
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scanner.values().stream().forEach(s -> {
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try {
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s.close(true);
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} catch (IOException ioe) {
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LOG.error("Failed while closing store file", ioe);
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}
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});
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scanner.clear();
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if (source != null) {
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source.close();
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}
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TEST_UTIL.deleteTableIfAny(tableName);
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}
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}
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/**
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* Tests that the client sees meta table changes as atomic during splits
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*/
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@ -152,8 +233,7 @@ public class TestEndToEndSplitTransaction {
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try {
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Random random = new Random();
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for (int i = 0; i < 5; i++) {
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List<RegionInfo> regions =
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MetaTableAccessor.getTableRegions(connection, tableName, true);
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List<RegionInfo> regions = MetaTableAccessor.getTableRegions(connection, tableName, true);
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if (regions.isEmpty()) {
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continue;
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}
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@ -226,9 +306,11 @@ public class TestEndToEndSplitTransaction {
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/** verify region boundaries obtained from MetaScanner */
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void verifyRegionsUsingMetaTableAccessor() throws Exception {
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List<RegionInfo> regionList = MetaTableAccessor.getTableRegions(connection, tableName, true);
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verifyTableRegions(regionList.stream().collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
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verifyTableRegions(regionList.stream()
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.collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
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regionList = MetaTableAccessor.getAllRegions(connection, true);
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verifyTableRegions(regionList.stream().collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
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verifyTableRegions(regionList.stream()
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.collect(Collectors.toCollection(() -> new TreeSet<>(RegionInfo.COMPARATOR))));
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}
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/** verify region boundaries obtained from HTable.getStartEndKeys() */
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@ -343,7 +425,9 @@ public class TestEndToEndSplitTransaction {
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}
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}
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/** Blocks until the region split is complete in hbase:meta and region server opens the daughters */
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/**
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* Blocks until the region split is complete in hbase:meta and region server opens the daughters
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*/
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public static void blockUntilRegionSplit(Configuration conf, long timeout,
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final byte[] regionName, boolean waitForDaughters)
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throws IOException, InterruptedException {
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@ -389,10 +473,32 @@ public class TestEndToEndSplitTransaction {
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rem = timeout - (System.currentTimeMillis() - start);
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blockUntilRegionIsOpened(conf, rem, daughterB);
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// Compacting the new region to make sure references can be cleaned up
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compactAndBlockUntilDone(TEST_UTIL.getAdmin(),
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TEST_UTIL.getMiniHBaseCluster().getRegionServer(0), daughterA.getRegionName());
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compactAndBlockUntilDone(TEST_UTIL.getAdmin(),
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TEST_UTIL.getMiniHBaseCluster().getRegionServer(0), daughterB.getRegionName());
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removeCompactedFiles(conn, timeout, daughterA);
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removeCompactedFiles(conn, timeout, daughterB);
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}
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}
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}
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public static void removeCompactedFiles(Connection conn, long timeout, RegionInfo hri)
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throws IOException, InterruptedException {
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log("remove compacted files for : " + hri.getRegionNameAsString());
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List<HRegion> regions = TEST_UTIL.getHBaseCluster().getRegions(hri.getTable());
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regions.stream().forEach(r -> {
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try {
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r.getStores().get(0).closeAndArchiveCompactedFiles();
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} catch (IOException ioe) {
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LOG.error("failed in removing compacted file", ioe);
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}
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});
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}
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public static void blockUntilRegionIsInMeta(Connection conn, long timeout, RegionInfo hri)
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throws IOException, InterruptedException {
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log("blocking until region is in META: " + hri.getRegionNameAsString());
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@ -415,7 +521,9 @@ public class TestEndToEndSplitTransaction {
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Table table = conn.getTable(hri.getTable())) {
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byte[] row = hri.getStartKey();
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// Check for null/empty row. If we find one, use a key that is likely to be in first region.
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if (row == null || row.length <= 0) row = new byte[] { '0' };
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if (row == null || row.length <= 0) {
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row = new byte[] { '0' };
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}
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Get get = new Get(row);
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while (System.currentTimeMillis() - start < timeout) {
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try {
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@ -31,7 +31,9 @@ import java.util.List;
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import java.util.Map;
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import java.util.Optional;
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import java.util.concurrent.CountDownLatch;
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import java.util.concurrent.TimeUnit;
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import java.util.concurrent.atomic.AtomicBoolean;
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import org.apache.hadoop.conf.Configuration;
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import org.apache.hadoop.fs.FileSystem;
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import org.apache.hadoop.fs.Path;
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@ -50,6 +52,7 @@ import org.apache.hadoop.hbase.TableName;
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import org.apache.hadoop.hbase.UnknownRegionException;
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import org.apache.hadoop.hbase.ZooKeeperConnectionException;
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import org.apache.hadoop.hbase.client.Admin;
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import org.apache.hadoop.hbase.client.CompactionState;
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import org.apache.hadoop.hbase.client.Consistency;
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import org.apache.hadoop.hbase.client.Delete;
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import org.apache.hadoop.hbase.client.DoNotRetryRegionException;
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@ -78,6 +81,10 @@ import org.apache.hadoop.hbase.master.assignment.RegionStates;
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import org.apache.hadoop.hbase.procedure2.ProcedureTestingUtility;
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import org.apache.hadoop.hbase.regionserver.compactions.CompactionContext;
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import org.apache.hadoop.hbase.regionserver.throttle.NoLimitThroughputController;
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import org.apache.hadoop.hbase.shaded.protobuf.ProtobufUtil;
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import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.RegionStateTransition.TransitionCode;
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import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionRequest;
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import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionResponse;
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import org.apache.hadoop.hbase.testclassification.LargeTests;
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import org.apache.hadoop.hbase.testclassification.RegionServerTests;
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import org.apache.hadoop.hbase.util.Bytes;
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@ -85,7 +92,10 @@ import org.apache.hadoop.hbase.util.EnvironmentEdgeManager;
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import org.apache.hadoop.hbase.util.FSUtils;
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import org.apache.hadoop.hbase.util.HBaseFsck;
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import org.apache.hadoop.hbase.util.JVMClusterUtil.RegionServerThread;
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import org.apache.hadoop.hbase.util.RetryCounter;
|
||||
import org.apache.hadoop.hbase.util.Threads;
|
||||
import org.apache.hbase.thirdparty.com.google.protobuf.RpcController;
|
||||
import org.apache.hbase.thirdparty.com.google.protobuf.ServiceException;
|
||||
import org.apache.zookeeper.KeeperException;
|
||||
import org.apache.zookeeper.KeeperException.NodeExistsException;
|
||||
import org.junit.After;
|
||||
|
|
@ -101,14 +111,6 @@ import org.junit.rules.TestName;
|
|||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
||||
import org.apache.hbase.thirdparty.com.google.protobuf.RpcController;
|
||||
import org.apache.hbase.thirdparty.com.google.protobuf.ServiceException;
|
||||
|
||||
import org.apache.hadoop.hbase.shaded.protobuf.ProtobufUtil;
|
||||
import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.RegionStateTransition.TransitionCode;
|
||||
import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionRequest;
|
||||
import org.apache.hadoop.hbase.shaded.protobuf.generated.RegionServerStatusProtos.ReportRegionStateTransitionResponse;
|
||||
|
||||
/**
|
||||
* The below tests are testing split region against a running cluster
|
||||
*/
|
||||
|
|
@ -386,11 +388,18 @@ public class TestSplitTransactionOnCluster {
|
|||
// Compact first to ensure we have cleaned up references -- else the split
|
||||
// will fail.
|
||||
this.admin.compactRegion(daughter.getRegionName());
|
||||
RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
|
||||
while (CompactionState.NONE != admin.getCompactionStateForRegion(daughter.getRegionName())
|
||||
&& retrier.shouldRetry()) {
|
||||
retrier.sleepUntilNextRetry();
|
||||
}
|
||||
daughters = cluster.getRegions(tableName);
|
||||
HRegion daughterRegion = null;
|
||||
for (HRegion r : daughters) {
|
||||
if (RegionInfo.COMPARATOR.compare(r.getRegionInfo(), daughter) == 0) {
|
||||
daughterRegion = r;
|
||||
// Archiving the compacted references file
|
||||
r.getStores().get(0).closeAndArchiveCompactedFiles();
|
||||
LOG.info("Found matching HRI: " + daughterRegion);
|
||||
break;
|
||||
}
|
||||
|
|
@ -533,11 +542,19 @@ public class TestSplitTransactionOnCluster {
|
|||
// Call split.
|
||||
this.admin.splitRegion(hri.getRegionName());
|
||||
List<HRegion> daughters = checkAndGetDaughters(tableName);
|
||||
|
||||
// Before cleanup, get a new master.
|
||||
HMaster master = abortAndWaitForMaster();
|
||||
// Now call compact on the daughters and clean up any references.
|
||||
for (HRegion daughter : daughters) {
|
||||
daughter.compact(true);
|
||||
RetryCounter retrier = new RetryCounter(30, 1, TimeUnit.SECONDS);
|
||||
while (CompactionState.NONE != admin
|
||||
.getCompactionStateForRegion(daughter.getRegionInfo().getRegionName())
|
||||
&& retrier.shouldRetry()) {
|
||||
retrier.sleepUntilNextRetry();
|
||||
}
|
||||
daughter.getStores().get(0).closeAndArchiveCompactedFiles();
|
||||
assertFalse(daughter.hasReferences());
|
||||
}
|
||||
// BUT calling compact on the daughters is not enough. The CatalogJanitor looks
|
||||
|
|
|
|||
Loading…
Reference in New Issue