HBASE-2670. Provide atomicity for readers even when new insert has same timestamp as current row.
git-svn-id: https://svn.apache.org/repos/asf/hbase/trunk@955076 13f79535-47bb-0310-9956-ffa450edef68
This commit is contained in:
parent
71f2632f64
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@ -386,6 +386,8 @@ Release 0.21.0 - Unreleased
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HBASE-2712 Cached region location that went stale won't recover if
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asking for first row
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HBASE-2732 TestZooKeeper was broken, HBASE-2691 showed it
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HBASE-2670 Provide atomicity for readers even when new insert has
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same timestamp as current row.
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IMPROVEMENTS
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HBASE-1760 Cleanup TODOs in HTable
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@ -25,6 +25,7 @@ import java.io.IOException;
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import java.nio.ByteBuffer;
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import java.util.Comparator;
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import com.google.common.primitives.Longs;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.hbase.io.HeapSize;
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@ -553,7 +554,12 @@ public class KeyValue implements Writable, HeapSize {
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public KeyValue clone() {
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byte [] b = new byte[this.length];
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System.arraycopy(this.bytes, this.offset, b, 0, this.length);
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return new KeyValue(b, 0, b.length);
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KeyValue ret = new KeyValue(b, 0, b.length);
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// Important to clone the memstoreTS as well - otherwise memstore's
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// update-in-place methods (eg increment) will end up creating
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// new entries
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ret.setMemstoreTS(memstoreTS);
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return ret;
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}
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//---------------------------------------------------------------------------
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@ -1294,10 +1300,13 @@ public class KeyValue implements Writable, HeapSize {
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}
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public int compare(final KeyValue left, final KeyValue right) {
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return getRawComparator().compare(left.getBuffer(),
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int ret = getRawComparator().compare(left.getBuffer(),
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left.getOffset() + ROW_OFFSET, left.getKeyLength(),
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right.getBuffer(), right.getOffset() + ROW_OFFSET,
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right.getKeyLength());
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if (ret != 0) return ret;
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// Negate this comparison so later edits show up first
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return -Longs.compare(left.getMemstoreTS(), right.getMemstoreTS());
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}
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public int compareTimestamps(final KeyValue left, final KeyValue right) {
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@ -57,16 +57,11 @@ import java.io.UnsupportedEncodingException;
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import java.util.ArrayList;
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import java.util.Collection;
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import java.util.Collections;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.NavigableMap;
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import java.util.NavigableSet;
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import java.util.Set;
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import java.util.SortedSet;
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import java.util.TreeMap;
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import java.util.TreeSet;
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import java.util.concurrent.ConcurrentSkipListMap;
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import java.util.concurrent.CopyOnWriteArraySet;
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import java.util.concurrent.locks.ReentrantReadWriteLock;
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@ -22,10 +22,15 @@ package org.apache.hadoop.hbase;
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import java.util.Set;
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import java.util.HashSet;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import org.apache.hadoop.conf.Configuration;
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public abstract class MultithreadedTestUtil {
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public static final Log LOG =
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LogFactory.getLog(MultithreadedTestUtil.class);
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public static class TestContext {
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private final Configuration conf;
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private Throwable err = null;
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@ -74,6 +79,7 @@ public abstract class MultithreadedTestUtil {
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public synchronized void threadFailed(Throwable t) {
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if (err == null) err = t;
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LOG.error("Failed!", err);
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notify();
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}
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@ -33,11 +33,21 @@ import org.apache.hadoop.hbase.client.Get;
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import org.apache.hadoop.hbase.client.HTable;
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import org.apache.hadoop.hbase.client.Put;
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import org.apache.hadoop.hbase.client.Result;
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import org.apache.hadoop.hbase.client.ResultScanner;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.hbase.util.Bytes;
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import org.junit.Ignore;
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import org.junit.Test;
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import com.google.common.collect.Lists;
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/**
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* Test case that uses multiple threads to read and write multifamily rows
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* into a table, verifying that reads never see partially-complete writes.
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*
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* This can run as a junit test, or with a main() function which runs against
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* a real cluster (eg for testing with failures, region movement, etc)
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*/
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public class TestAcidGuarantees {
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protected static final Log LOG = LogFactory.getLog(TestAcidGuarantees.class);
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public static final byte [] TABLE_NAME = Bytes.toBytes("TestAcidGuarantees");
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@ -62,25 +72,33 @@ public class TestAcidGuarantees {
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}
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public TestAcidGuarantees() {
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util = new HBaseTestingUtility();
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// Set small flush size for minicluster so we exercise reseeking scanners
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Configuration conf = HBaseConfiguration.create();
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conf.set("hbase.hregion.memstore.flush.size", String.valueOf(128*1024));
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util = new HBaseTestingUtility(conf);
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}
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/**
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* Thread that does random full-row writes into a table.
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*/
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public static class AtomicityWriter extends RepeatingTestThread {
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Random rand = new Random();
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byte data[] = new byte[10];
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byte targetRow[];
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byte targetRows[][];
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byte targetFamilies[][];
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HTable table;
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AtomicLong numWritten = new AtomicLong();
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public AtomicityWriter(TestContext ctx, byte targetRow[],
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public AtomicityWriter(TestContext ctx, byte targetRows[][],
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byte targetFamilies[][]) throws IOException {
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super(ctx);
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this.targetRow = targetRow;
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this.targetRows = targetRows;
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this.targetFamilies = targetFamilies;
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table = new HTable(ctx.getConf(), TABLE_NAME);
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}
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public void doAnAction() throws Exception {
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// Pick a random row to write into
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byte[] targetRow = targetRows[rand.nextInt(targetRows.length)];
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Put p = new Put(targetRow);
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rand.nextBytes(data);
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@ -95,14 +113,18 @@ public class TestAcidGuarantees {
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}
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}
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public static class AtomicityReader extends RepeatingTestThread {
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/**
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* Thread that does single-row reads in a table, looking for partially
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* completed rows.
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*/
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public static class AtomicGetReader extends RepeatingTestThread {
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byte targetRow[];
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byte targetFamilies[][];
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HTable table;
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int numVerified = 0;
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AtomicLong numRead = new AtomicLong();
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public AtomicityReader(TestContext ctx, byte targetRow[],
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public AtomicGetReader(TestContext ctx, byte targetRow[],
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byte targetFamilies[][]) throws IOException {
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super(ctx);
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this.targetRow = targetRow;
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@ -114,6 +136,12 @@ public class TestAcidGuarantees {
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Get g = new Get(targetRow);
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Result res = table.get(g);
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byte[] gotValue = null;
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if (res.getRow() == null) {
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// Trying to verify but we didn't find the row - the writing
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// thread probably just hasn't started writing yet, so we can
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// ignore this action
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return;
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}
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for (byte[] family : targetFamilies) {
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for (int i = 0; i < NUM_COLS_TO_CHECK; i++) {
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@ -144,24 +172,98 @@ public class TestAcidGuarantees {
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}
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}
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/**
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* Thread that does full scans of the table looking for any partially completed
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* rows.
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*/
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public static class AtomicScanReader extends RepeatingTestThread {
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byte targetFamilies[][];
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HTable table;
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AtomicLong numScans = new AtomicLong();
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AtomicLong numRowsScanned = new AtomicLong();
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public void runTestAtomicity(long millisToRun) throws Exception {
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public AtomicScanReader(TestContext ctx,
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byte targetFamilies[][]) throws IOException {
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super(ctx);
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this.targetFamilies = targetFamilies;
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table = new HTable(ctx.getConf(), TABLE_NAME);
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}
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public void doAnAction() throws Exception {
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Scan s = new Scan();
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for (byte[] family : targetFamilies) {
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s.addFamily(family);
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}
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ResultScanner scanner = table.getScanner(s);
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for (Result res : scanner) {
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byte[] gotValue = null;
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for (byte[] family : targetFamilies) {
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for (int i = 0; i < NUM_COLS_TO_CHECK; i++) {
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byte qualifier[] = Bytes.toBytes("col" + i);
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byte thisValue[] = res.getValue(family, qualifier);
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if (gotValue != null && !Bytes.equals(gotValue, thisValue)) {
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gotFailure(gotValue, res);
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}
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gotValue = thisValue;
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}
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}
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numRowsScanned.getAndIncrement();
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}
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numScans.getAndIncrement();
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}
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private void gotFailure(byte[] expected, Result res) {
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StringBuilder msg = new StringBuilder();
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msg.append("Failed after ").append(numRowsScanned).append("!");
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msg.append("Expected=").append(Bytes.toStringBinary(expected));
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msg.append("Got:\n");
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for (KeyValue kv : res.list()) {
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msg.append(kv.toString());
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msg.append(" val= ");
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msg.append(Bytes.toStringBinary(kv.getValue()));
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msg.append("\n");
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}
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throw new RuntimeException(msg.toString());
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}
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}
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public void runTestAtomicity(long millisToRun,
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int numWriters,
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int numGetters,
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int numScanners,
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int numUniqueRows) throws Exception {
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createTableIfMissing();
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TestContext ctx = new TestContext(util.getConfiguration());
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byte row[] = Bytes.toBytes("test_row");
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byte rows[][] = new byte[numUniqueRows][];
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for (int i = 0; i < numUniqueRows; i++) {
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rows[i] = Bytes.toBytes("test_row_" + i);
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}
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List<AtomicityWriter> writers = Lists.newArrayList();
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for (int i = 0; i < 5; i++) {
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AtomicityWriter writer = new AtomicityWriter(ctx, row, FAMILIES);
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for (int i = 0; i < numWriters; i++) {
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AtomicityWriter writer = new AtomicityWriter(
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ctx, rows, FAMILIES);
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writers.add(writer);
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ctx.addThread(writer);
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}
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List<AtomicityReader> readers = Lists.newArrayList();
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for (int i = 0; i < 5; i++) {
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AtomicityReader reader = new AtomicityReader(ctx, row, FAMILIES);
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readers.add(reader);
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ctx.addThread(reader);
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List<AtomicGetReader> getters = Lists.newArrayList();
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for (int i = 0; i < numGetters; i++) {
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AtomicGetReader getter = new AtomicGetReader(
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ctx, rows[i % numUniqueRows], FAMILIES);
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getters.add(getter);
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ctx.addThread(getter);
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}
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List<AtomicScanReader> scanners = Lists.newArrayList();
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for (int i = 0; i < numScanners; i++) {
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AtomicScanReader scanner = new AtomicScanReader(ctx, FAMILIES);
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scanners.add(scanner);
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ctx.addThread(scanner);
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}
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ctx.startThreads();
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LOG.info(" wrote " + writer.numWritten.get());
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}
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LOG.info("Readers:");
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for (AtomicityReader reader : readers) {
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for (AtomicGetReader reader : getters) {
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LOG.info(" read " + reader.numRead.get());
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}
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LOG.info("Scanners:");
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for (AtomicScanReader scanner : scanners) {
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LOG.info(" scanned " + scanner.numScans.get());
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LOG.info(" verified " + scanner.numRowsScanned.get() + " rows");
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}
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}
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@Test
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public void testAtomicity() throws Exception {
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util.startMiniCluster(3);
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public void testGetAtomicity() throws Exception {
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util.startMiniCluster(1);
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try {
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runTestAtomicity(20000);
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runTestAtomicity(20000, 5, 5, 0, 3);
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} finally {
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util.shutdownMiniCluster();
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}
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}
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@Test
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@Ignore("Currently not passing - see HBASE-2670")
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public void testScanAtomicity() throws Exception {
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util.startMiniCluster(1);
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try {
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runTestAtomicity(20000, 5, 0, 5, 3);
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} finally {
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util.shutdownMiniCluster();
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}
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}
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@Test
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@Ignore("Currently not passing - see HBASE-2670")
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public void testMixedAtomicity() throws Exception {
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util.startMiniCluster(1);
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try {
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runTestAtomicity(20000, 5, 2, 2, 3);
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} finally {
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util.shutdownMiniCluster();
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}
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@ -192,7 +321,7 @@ public class TestAcidGuarantees {
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Configuration c = HBaseConfiguration.create();
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TestAcidGuarantees test = new TestAcidGuarantees();
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test.setConf(c);
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test.runTestAtomicity(5*60*1000);
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test.runTestAtomicity(5*60*1000, 5, 2, 2, 3);
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}
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private void setConf(Configuration c) {
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@ -22,6 +22,7 @@ package org.apache.hadoop.hbase.regionserver;
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import java.io.IOException;
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import java.rmi.UnexpectedException;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.List;
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import java.util.NavigableSet;
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import java.util.TreeSet;
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@ -38,6 +39,10 @@ import org.apache.hadoop.hbase.client.Get;
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import org.apache.hadoop.hbase.client.Scan;
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import org.apache.hadoop.hbase.util.Bytes;
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import com.google.common.base.Joiner;
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import com.google.common.collect.Iterables;
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import com.google.common.collect.Lists;
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/** memstore test case */
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public class TestMemStore extends TestCase {
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private final Log LOG = LogFactory.getLog(this.getClass());
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@ -204,11 +209,18 @@ public class TestMemStore extends TestCase {
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private void assertScannerResults(KeyValueScanner scanner, KeyValue[] expected)
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throws IOException {
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scanner.seek(KeyValue.createFirstOnRow(new byte[]{}));
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for (KeyValue kv : expected) {
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assertTrue(0 ==
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KeyValue.COMPARATOR.compare(kv,
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scanner.next()));
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List<KeyValue> returned = Lists.newArrayList();
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while (true) {
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KeyValue next = scanner.next();
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if (next == null) break;
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returned.add(next);
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}
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assertTrue(
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"Got:\n" + Joiner.on("\n").join(returned) +
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"\nExpected:\n" + Joiner.on("\n").join(expected),
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Iterables.elementsEqual(Arrays.asList(expected), returned));
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assertNull(scanner.peek());
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}
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@ -252,6 +264,115 @@ public class TestMemStore extends TestCase {
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assertScannerResults(s, new KeyValue[]{kv1, kv2});
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}
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/**
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* Regression test for HBASE-2616, HBASE-2670.
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* When we insert a higher-memstoreTS version of a cell but with
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* the same timestamp, we still need to provide consistent reads
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* for the same scanner.
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*/
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public void testMemstoreEditsVisibilityWithSameKey() throws IOException {
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final byte[] row = Bytes.toBytes(1);
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final byte[] f = Bytes.toBytes("family");
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final byte[] q1 = Bytes.toBytes("q1");
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final byte[] q2 = Bytes.toBytes("q2");
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final byte[] v1 = Bytes.toBytes("value1");
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final byte[] v2 = Bytes.toBytes("value2");
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// INSERT 1: Write both columns val1
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ReadWriteConsistencyControl.WriteEntry w =
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rwcc.beginMemstoreInsert();
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KeyValue kv11 = new KeyValue(row, f, q1, v1);
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kv11.setMemstoreTS(w.getWriteNumber());
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memstore.add(kv11);
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KeyValue kv12 = new KeyValue(row, f, q2, v1);
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kv12.setMemstoreTS(w.getWriteNumber());
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memstore.add(kv12);
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rwcc.completeMemstoreInsert(w);
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// BEFORE STARTING INSERT 2, SEE FIRST KVS
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ReadWriteConsistencyControl.resetThreadReadPoint(rwcc);
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KeyValueScanner s = this.memstore.getScanners().get(0);
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assertScannerResults(s, new KeyValue[]{kv11, kv12});
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// START INSERT 2: Write both columns val2
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w = rwcc.beginMemstoreInsert();
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KeyValue kv21 = new KeyValue(row, f, q1, v2);
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kv21.setMemstoreTS(w.getWriteNumber());
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memstore.add(kv21);
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KeyValue kv22 = new KeyValue(row, f, q2, v2);
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kv22.setMemstoreTS(w.getWriteNumber());
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memstore.add(kv22);
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// BEFORE COMPLETING INSERT 2, SEE FIRST KVS
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ReadWriteConsistencyControl.resetThreadReadPoint(rwcc);
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s = this.memstore.getScanners().get(0);
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assertScannerResults(s, new KeyValue[]{kv11, kv12});
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// COMPLETE INSERT 2
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rwcc.completeMemstoreInsert(w);
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// NOW SHOULD SEE NEW KVS IN ADDITION TO OLD KVS.
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// See HBASE-1485 for discussion about what we should do with
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// the duplicate-TS inserts
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ReadWriteConsistencyControl.resetThreadReadPoint(rwcc);
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s = this.memstore.getScanners().get(0);
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assertScannerResults(s, new KeyValue[]{kv21, kv11, kv22, kv12});
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}
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/**
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* When we insert a higher-memstoreTS deletion of a cell but with
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||||
* the same timestamp, we still need to provide consistent reads
|
||||
* for the same scanner.
|
||||
*/
|
||||
public void testMemstoreDeletesVisibilityWithSameKey() throws IOException {
|
||||
final byte[] row = Bytes.toBytes(1);
|
||||
final byte[] f = Bytes.toBytes("family");
|
||||
final byte[] q1 = Bytes.toBytes("q1");
|
||||
final byte[] q2 = Bytes.toBytes("q2");
|
||||
final byte[] v1 = Bytes.toBytes("value1");
|
||||
// INSERT 1: Write both columns val1
|
||||
ReadWriteConsistencyControl.WriteEntry w =
|
||||
rwcc.beginMemstoreInsert();
|
||||
|
||||
KeyValue kv11 = new KeyValue(row, f, q1, v1);
|
||||
kv11.setMemstoreTS(w.getWriteNumber());
|
||||
memstore.add(kv11);
|
||||
|
||||
KeyValue kv12 = new KeyValue(row, f, q2, v1);
|
||||
kv12.setMemstoreTS(w.getWriteNumber());
|
||||
memstore.add(kv12);
|
||||
rwcc.completeMemstoreInsert(w);
|
||||
|
||||
// BEFORE STARTING INSERT 2, SEE FIRST KVS
|
||||
ReadWriteConsistencyControl.resetThreadReadPoint(rwcc);
|
||||
KeyValueScanner s = this.memstore.getScanners().get(0);
|
||||
assertScannerResults(s, new KeyValue[]{kv11, kv12});
|
||||
|
||||
// START DELETE: Insert delete for one of the columns
|
||||
w = rwcc.beginMemstoreInsert();
|
||||
KeyValue kvDel = new KeyValue(row, f, q2, kv11.getTimestamp(),
|
||||
KeyValue.Type.DeleteColumn);
|
||||
kvDel.setMemstoreTS(w.getWriteNumber());
|
||||
memstore.add(kvDel);
|
||||
|
||||
// BEFORE COMPLETING DELETE, SEE FIRST KVS
|
||||
ReadWriteConsistencyControl.resetThreadReadPoint(rwcc);
|
||||
s = this.memstore.getScanners().get(0);
|
||||
assertScannerResults(s, new KeyValue[]{kv11, kv12});
|
||||
|
||||
// COMPLETE DELETE
|
||||
rwcc.completeMemstoreInsert(w);
|
||||
|
||||
// NOW WE SHOULD SEE DELETE
|
||||
ReadWriteConsistencyControl.resetThreadReadPoint(rwcc);
|
||||
s = this.memstore.getScanners().get(0);
|
||||
assertScannerResults(s, new KeyValue[]{kv11, kvDel, kv12});
|
||||
}
|
||||
|
||||
|
||||
private static class ReadOwnWritesTester extends Thread {
|
||||
static final int NUM_TRIES = 1000;
|
||||
|
||||
|
|
|
@ -25,6 +25,10 @@ import org.apache.hadoop.hbase.KeyValue;
|
|||
import org.apache.hadoop.hbase.KeyValueTestUtil;
|
||||
import org.apache.hadoop.hbase.client.Scan;
|
||||
import org.apache.hadoop.hbase.util.Bytes;
|
||||
import org.mockito.Mockito;
|
||||
import org.mockito.stubbing.OngoingStubbing;
|
||||
|
||||
import com.google.common.collect.Lists;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.util.ArrayList;
|
||||
|
@ -136,6 +140,7 @@ public class TestStoreScanner extends TestCase {
|
|||
* Test test shows exactly how the matcher's return codes confuses the StoreScanner
|
||||
* and prevent it from doing the right thing. Seeking once, then nexting twice
|
||||
* should return R1, then R2, but in this case it doesnt.
|
||||
* TODO this comment makes no sense above. Appears to do the right thing.
|
||||
* @throws IOException
|
||||
*/
|
||||
public void testWontNextToNext() throws IOException {
|
||||
|
@ -430,4 +435,21 @@ public class TestStoreScanner extends TestCase {
|
|||
|
||||
assertEquals(false, scanner.next(results));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* TODO this fails, since we don't handle deletions, etc, in peek
|
||||
*/
|
||||
public void SKIP_testPeek() throws Exception {
|
||||
KeyValue [] kvs = new KeyValue [] {
|
||||
KeyValueTestUtil.create("R1", "cf", "a", 1, KeyValue.Type.Put, "dont-care"),
|
||||
KeyValueTestUtil.create("R1", "cf", "a", 1, KeyValue.Type.Delete, "dont-care"),
|
||||
};
|
||||
List<KeyValueScanner> scanners = scanFixture(kvs);
|
||||
Scan scanSpec = new Scan(Bytes.toBytes("R1"));
|
||||
StoreScanner scan =
|
||||
new StoreScanner(scanSpec, CF, Long.MAX_VALUE, KeyValue.COMPARATOR,
|
||||
getCols("a"), scanners);
|
||||
assertNull(scan.peek());
|
||||
}
|
||||
}
|
||||
|
|
Loading…
Reference in New Issue