Copy directly between 2 ByteBlockPool to avoid double-copy (#12786)

* Copy directly between 2 ByteBlockPool to avoid double-copy

* add a comment on the start address

* Add unit test for NodeHash

* tidy code
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Dzung Bui 2023-11-14 02:35:37 +09:00 committed by GitHub
parent fcf6878144
commit 1999353d9e
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4 changed files with 151 additions and 13 deletions

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@ -228,6 +228,46 @@ public final class ByteBlockPool implements Accountable {
append(bytes.bytes, bytes.offset, bytes.length); append(bytes.bytes, bytes.offset, bytes.length);
} }
/**
* Append the bytes from a source {@link ByteBlockPool} at a given offset and length
*
* @param srcPool the source pool to copy from
* @param srcOffset the source pool offset
* @param length the number of bytes to copy
*/
public void append(ByteBlockPool srcPool, long srcOffset, int length) {
int bytesLeft = length;
while (bytesLeft > 0) {
int bufferLeft = BYTE_BLOCK_SIZE - byteUpto;
if (bytesLeft < bufferLeft) { // fits within current buffer
appendBytesSingleBuffer(srcPool, srcOffset, bytesLeft);
break;
} else { // fill up this buffer and move to next one
if (bufferLeft > 0) {
appendBytesSingleBuffer(srcPool, srcOffset, bufferLeft);
bytesLeft -= bufferLeft;
srcOffset += bufferLeft;
}
nextBuffer();
}
}
}
// copy from source pool until no bytes left. length must be fit within the current head buffer
private void appendBytesSingleBuffer(ByteBlockPool srcPool, long srcOffset, int length) {
assert length <= BYTE_BLOCK_SIZE - byteUpto;
// doing a loop as the bytes to copy might span across multiple byte[] in srcPool
while (length > 0) {
byte[] srcBytes = srcPool.buffers[Math.toIntExact(srcOffset >> BYTE_BLOCK_SHIFT)];
int srcPos = Math.toIntExact(srcOffset & BYTE_BLOCK_MASK);
int bytesToCopy = Math.min(length, BYTE_BLOCK_SIZE - srcPos);
System.arraycopy(srcBytes, srcPos, buffer, byteUpto, bytesToCopy);
length -= bytesToCopy;
srcOffset += bytesToCopy;
byteUpto += bytesToCopy;
}
}
/** /**
* Append the provided byte array at the current position. * Append the provided byte array at the current position.
* *
@ -277,6 +317,7 @@ public final class ByteBlockPool implements Accountable {
int pos = (int) (offset & BYTE_BLOCK_MASK); int pos = (int) (offset & BYTE_BLOCK_MASK);
while (bytesLeft > 0) { while (bytesLeft > 0) {
byte[] buffer = buffers[bufferIndex++]; byte[] buffer = buffers[bufferIndex++];
assert buffer != null;
int chunk = Math.min(bytesLeft, BYTE_BLOCK_SIZE - pos); int chunk = Math.min(bytesLeft, BYTE_BLOCK_SIZE - pos);
System.arraycopy(buffer, pos, bytes, bytesOffset, chunk); System.arraycopy(buffer, pos, bytes, bytesOffset, chunk);
bytesOffset += chunk; bytesOffset += chunk;

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@ -123,11 +123,9 @@ final class NodeHash<T> {
assert lastFallbackHashSlot != -1 && lastFallbackNodeLength != -1; assert lastFallbackHashSlot != -1 && lastFallbackNodeLength != -1;
// it was already in fallback -- promote to primary // it was already in fallback -- promote to primary
// TODO: Copy directly between 2 ByteBlockPool to avoid double-copy primaryTable.setNodeAddress(hashSlot, nodeAddress);
primaryTable.setNode( primaryTable.copyFallbackNodeBytes(
hashSlot, hashSlot, fallbackTable, lastFallbackHashSlot, lastFallbackNodeLength);
nodeAddress,
fallbackTable.getBytes(lastFallbackHashSlot, lastFallbackNodeLength));
} else { } else {
// not in fallback either -- freeze & add the incoming node // not in fallback either -- freeze & add the incoming node
@ -142,7 +140,8 @@ final class NodeHash<T> {
byte[] buf = new byte[Math.toIntExact(nodeAddress - startAddress + 1)]; byte[] buf = new byte[Math.toIntExact(nodeAddress - startAddress + 1)];
fstCompiler.bytes.copyBytes(startAddress, buf, 0, buf.length); fstCompiler.bytes.copyBytes(startAddress, buf, 0, buf.length);
primaryTable.setNode(hashSlot, nodeAddress, buf); primaryTable.setNodeAddress(hashSlot, nodeAddress);
primaryTable.copyNodeBytes(hashSlot, buf);
// confirm frozen hash and unfrozen hash are the same // confirm frozen hash and unfrozen hash are the same
assert primaryTable.hash(nodeAddress, hashSlot) == hash assert primaryTable.hash(nodeAddress, hashSlot) == hash
@ -221,7 +220,7 @@ final class NodeHash<T> {
} }
/** Inner class because it needs access to hash function and FST bytes. */ /** Inner class because it needs access to hash function and FST bytes. */
private class PagedGrowableHash { class PagedGrowableHash {
// storing the FST node address where the position is the masked hash of the node arcs // storing the FST node address where the position is the masked hash of the node arcs
private PagedGrowableWriter fstNodeAddress; private PagedGrowableWriter fstNodeAddress;
// storing the local copiedNodes address in the same position as fstNodeAddress // storing the local copiedNodes address in the same position as fstNodeAddress
@ -289,21 +288,38 @@ final class NodeHash<T> {
} }
/** /**
* Set the node address and bytes from the provided hash slot * Set the node address from the provided hash slot
* *
* @param hashSlot the hash slot to write to * @param hashSlot the hash slot to write to
* @param nodeAddress the node address * @param nodeAddress the node address
* @param bytes the node bytes to be copied
*/ */
public void setNode(long hashSlot, long nodeAddress, byte[] bytes) { public void setNodeAddress(long hashSlot, long nodeAddress) {
assert fstNodeAddress.get(hashSlot) == 0; assert fstNodeAddress.get(hashSlot) == 0;
fstNodeAddress.set(hashSlot, nodeAddress); fstNodeAddress.set(hashSlot, nodeAddress);
count++; count++;
}
/** copy the node bytes from the FST */
void copyNodeBytes(long hashSlot, byte[] bytes) {
assert copiedNodeAddress.get(hashSlot) == 0;
copiedNodes.append(bytes); copiedNodes.append(bytes);
// write the offset, which points to the last byte of the node we copied since we later read // write the offset, which points to the last byte of the node we copied since we later read
// this node in reverse // this node in reverse
copiedNodeAddress.set(hashSlot, copiedNodes.getPosition() - 1);
}
/** promote the node bytes from the fallback table */
void copyFallbackNodeBytes(
long hashSlot, PagedGrowableHash fallbackTable, long fallbackHashSlot, int nodeLength) {
assert copiedNodeAddress.get(hashSlot) == 0; assert copiedNodeAddress.get(hashSlot) == 0;
long fallbackAddress = fallbackTable.copiedNodeAddress.get(fallbackHashSlot);
// fallbackAddress is the last offset of the node, but we need to copy the bytes from the
// start address
long fallbackStartAddress = fallbackAddress - nodeLength + 1;
assert fallbackStartAddress >= 0;
copiedNodes.append(fallbackTable.copiedNodes, fallbackStartAddress, nodeLength);
// write the offset, which points to the last byte of the node we copied since we later read
// this node in reverse
copiedNodeAddress.set(hashSlot, copiedNodes.getPosition() - 1); copiedNodeAddress.set(hashSlot, copiedNodes.getPosition() - 1);
} }

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@ -16,16 +16,46 @@
*/ */
package org.apache.lucene.util; package org.apache.lucene.util;
import java.io.IOException; import com.carrotsearch.randomizedtesting.generators.RandomBytes;
import java.util.ArrayList; import java.util.ArrayList;
import java.util.Arrays; import java.util.Arrays;
import java.util.List; import java.util.List;
import java.util.Random;
import org.apache.lucene.tests.util.LuceneTestCase; import org.apache.lucene.tests.util.LuceneTestCase;
import org.apache.lucene.tests.util.TestUtil; import org.apache.lucene.tests.util.TestUtil;
public class TestByteBlockPool extends LuceneTestCase { public class TestByteBlockPool extends LuceneTestCase {
public void testReadAndWrite() throws IOException { public void testAppendFromOtherPool() {
Random random = random();
ByteBlockPool pool = new ByteBlockPool(new ByteBlockPool.DirectAllocator());
final int numBytes = atLeast(2 << 16);
byte[] bytes = RandomBytes.randomBytesOfLength(random, numBytes);
pool.append(bytes);
ByteBlockPool anotherPool = new ByteBlockPool(new ByteBlockPool.DirectAllocator());
byte[] existingBytes = new byte[atLeast(500)];
anotherPool.append(existingBytes);
// now slice and append to another pool
int offset = TestUtil.nextInt(random, 1, 2 << 15);
int length = bytes.length - offset;
if (random.nextBoolean()) {
length = TestUtil.nextInt(random, 1, length);
}
anotherPool.append(pool, offset, length);
assertEquals(existingBytes.length + length, anotherPool.getPosition());
byte[] results = new byte[length];
anotherPool.readBytes(existingBytes.length, results, 0, results.length);
for (int i = 0; i < length; i++) {
assertEquals("byte @ index=" + i, bytes[offset + i], results[i]);
}
}
public void testReadAndWrite() {
Counter bytesUsed = Counter.newCounter(); Counter bytesUsed = Counter.newCounter();
ByteBlockPool pool = new ByteBlockPool(new ByteBlockPool.DirectTrackingAllocator(bytesUsed)); ByteBlockPool pool = new ByteBlockPool(new ByteBlockPool.DirectTrackingAllocator(bytesUsed));
pool.nextBuffer(); pool.nextBuffer();
@ -74,7 +104,7 @@ public class TestByteBlockPool extends LuceneTestCase {
} }
} }
public void testLargeRandomBlocks() throws IOException { public void testLargeRandomBlocks() {
Counter bytesUsed = Counter.newCounter(); Counter bytesUsed = Counter.newCounter();
ByteBlockPool pool = new ByteBlockPool(new ByteBlockPool.DirectTrackingAllocator(bytesUsed)); ByteBlockPool pool = new ByteBlockPool(new ByteBlockPool.DirectTrackingAllocator(bytesUsed));
pool.nextBuffer(); pool.nextBuffer();

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@ -0,0 +1,51 @@
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.lucene.util.fst;
import com.carrotsearch.randomizedtesting.generators.RandomBytes;
import org.apache.lucene.tests.util.LuceneTestCase;
public class TestNodeHash extends LuceneTestCase {
public void testCopyFallbackNodeBytes() {
// we don't need the FSTCompiler in this test
NodeHash<Object> nodeHash = new NodeHash<>(null, 1);
NodeHash<Object>.PagedGrowableHash primaryHashTable = nodeHash.new PagedGrowableHash();
NodeHash<Object>.PagedGrowableHash fallbackHashTable = nodeHash.new PagedGrowableHash();
int nodeLength = atLeast(500);
long fallbackHashSlot = 1;
byte[] fallbackBytes = RandomBytes.randomBytesOfLength(random(), nodeLength);
fallbackHashTable.copyNodeBytes(fallbackHashSlot, fallbackBytes);
// check if the bytes we wrote are the same as the original bytes
byte[] storedBytes = fallbackHashTable.getBytes(fallbackHashSlot, nodeLength);
for (int i = 0; i < nodeLength; i++) {
assertEquals("byte @ index=" + i, fallbackBytes[i], storedBytes[i]);
}
long primaryHashSlot = 2;
primaryHashTable.copyFallbackNodeBytes(
primaryHashSlot, fallbackHashTable, fallbackHashSlot, nodeLength);
// check if the bytes we copied are the same as the original bytes
byte[] copiedBytes = primaryHashTable.getBytes(primaryHashSlot, nodeLength);
for (int i = 0; i < nodeLength; i++) {
assertEquals("byte @ index=" + i, fallbackBytes[i], copiedBytes[i]);
}
}
}