Add chiSquareDataSet Stream Evaluator

This commit is contained in:
Joel Bernstein 2018-01-03 13:56:56 -05:00
parent 2da4ed17ba
commit 1cc49d18c2
3 changed files with 92 additions and 1 deletions

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@ -290,6 +290,7 @@ public class StreamHandler extends RequestHandlerBase implements SolrCoreAware,
.withFunctionName("sumSq", SumSqEvaluator.class) .withFunctionName("sumSq", SumSqEvaluator.class)
.withFunctionName("akima", AkimaEvaluator.class) .withFunctionName("akima", AkimaEvaluator.class)
.withFunctionName("lerp", LerpEvaluator.class) .withFunctionName("lerp", LerpEvaluator.class)
.withFunctionName("chiSquareDataSet", ChiSquareDataSetEvaluator.class)
// Boolean Stream Evaluators // Boolean Stream Evaluators

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@ -0,0 +1,65 @@
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.solr.client.solrj.io.eval;
import java.io.IOException;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.apache.commons.math3.stat.inference.ChiSquareTest;
import org.apache.solr.client.solrj.io.Tuple;
import org.apache.solr.client.solrj.io.stream.expr.StreamExpression;
import org.apache.solr.client.solrj.io.stream.expr.StreamFactory;
public class ChiSquareDataSetEvaluator extends RecursiveNumericListEvaluator implements TwoValueWorker {
protected static final long serialVersionUID = 1L;
public ChiSquareDataSetEvaluator(StreamExpression expression, StreamFactory factory) throws IOException {
super(expression, factory);
}
@Override
public Object doWork(Object value1, Object value2) throws IOException {
List<Number> listA = (List<Number>) value1;
List<Number> listB = (List<Number>) value2;
long[] sampleA = new long[listA.size()];
long[] sampleB = new long[listB.size()];
for(int i=0; i<sampleA.length; i++) {
sampleA[i] = listA.get(i).longValue();
}
for(int i=0; i<sampleB.length; i++) {
sampleB[i] = listB.get(i).longValue();
}
ChiSquareTest chiSquareTest = new ChiSquareTest();
double chiSquare = chiSquareTest.chiSquareDataSetsComparison(sampleA, sampleB);
double p = chiSquareTest.chiSquareTestDataSetsComparison(sampleA, sampleB);
Map<String,Number> m = new HashMap<>();
m.put("chisquare-statistic", chiSquare);
m.put("p-value", p);
return new Tuple(m);
}
}

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@ -7224,6 +7224,31 @@ public class StreamExpressionTest extends SolrCloudTestCase {
assertEquals(pval3.doubleValue(), 0.0404907407662755, .0001); assertEquals(pval3.doubleValue(), 0.0404907407662755, .0001);
} }
@Test
public void testChiSquareDataSet() throws Exception {
String cexpr = "let(echo=true," +
" a=array(1,1,2,3,4,5,6,7,9,10,11,12), " +
" b=array(1,1,2,3,4,5,6,7,1,1,1,1), " +
" chisquare=chiSquareDataSet(a, b))";
ModifiableSolrParams paramsLoc = new ModifiableSolrParams();
paramsLoc.set("expr", cexpr);
paramsLoc.set("qt", "/stream");
String url = cluster.getJettySolrRunners().get(0).getBaseUrl().toString()+"/"+COLLECTIONORALIAS;
TupleStream solrStream = new SolrStream(url, paramsLoc);
StreamContext context = new StreamContext();
solrStream.setStreamContext(context);
List<Tuple> tuples = getTuples(solrStream);
assertTrue(tuples.size() == 1);
Map testResult = (Map)tuples.get(0).get("chisquare");
Number tstat = (Number)testResult.get("chisquare-statistic");
Number pval = (Number)testResult.get("p-value");
assertEquals(tstat.doubleValue(), 20.219464814599252, .0001);
assertEquals(pval.doubleValue(), 0.04242018685334226, .0001);
}
@Test @Test
public void testMultiVariateNormalDistribution() throws Exception { public void testMultiVariateNormalDistribution() throws Exception {
String cexpr = "let(echo=true," + String cexpr = "let(echo=true," +