mirror of https://github.com/apache/nifi.git
Merge branch 'develop' into ListHDFS
This commit is contained in:
commit
25e2b6c8ad
|
@ -121,13 +121,13 @@ public class IndexConfiguration {
|
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}
|
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}
|
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|
||||
public File getWritableIndexDirectory(final File provenanceLogFile) {
|
||||
public File getWritableIndexDirectory(final File provenanceLogFile, final long newIndexTimestamp) {
|
||||
lock.lock();
|
||||
try {
|
||||
final File storageDirectory = provenanceLogFile.getParentFile();
|
||||
List<File> indexDirectories = this.indexDirectoryMap.get(storageDirectory);
|
||||
if (indexDirectories == null) {
|
||||
final File newDir = addNewIndex(storageDirectory, provenanceLogFile);
|
||||
final File newDir = addNewIndex(storageDirectory, provenanceLogFile, newIndexTimestamp);
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||||
indexDirectories = new ArrayList<>();
|
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indexDirectories.add(newDir);
|
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indexDirectoryMap.put(storageDirectory, indexDirectories);
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@ -135,7 +135,7 @@ public class IndexConfiguration {
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}
|
||||
|
||||
if (indexDirectories.isEmpty()) {
|
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final File newDir = addNewIndex(storageDirectory, provenanceLogFile);
|
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final File newDir = addNewIndex(storageDirectory, provenanceLogFile, newIndexTimestamp);
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||||
indexDirectories.add(newDir);
|
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return newDir;
|
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}
|
||||
|
@ -143,7 +143,7 @@ public class IndexConfiguration {
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final File lastDir = indexDirectories.get(indexDirectories.size() - 1);
|
||||
final long size = getSize(lastDir);
|
||||
if (size > repoConfig.getDesiredIndexSize()) {
|
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final File newDir = addNewIndex(storageDirectory, provenanceLogFile);
|
||||
final File newDir = addNewIndex(storageDirectory, provenanceLogFile, newIndexTimestamp);
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indexDirectories.add(newDir);
|
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return newDir;
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} else {
|
||||
|
@ -154,14 +154,14 @@ public class IndexConfiguration {
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|||
}
|
||||
}
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||||
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||||
private File addNewIndex(final File storageDirectory, final File provenanceLogFile) {
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private File addNewIndex(final File storageDirectory, final File provenanceLogFile, final long newIndexTimestamp) {
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// Build the event time of the first record into the index's filename so that we can determine
|
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// which index files to look at when we perform a search. We use the timestamp of the first record
|
||||
// in the Provenance Log file, rather than the current time, because we may perform the Indexing
|
||||
// retroactively.
|
||||
Long firstEntryTime = getFirstEntryTime(provenanceLogFile);
|
||||
if (firstEntryTime == null) {
|
||||
firstEntryTime = System.currentTimeMillis();
|
||||
firstEntryTime = newIndexTimestamp;
|
||||
}
|
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return new File(storageDirectory, "index-" + firstEntryTime);
|
||||
}
|
||||
|
@ -222,7 +222,7 @@ public class IndexConfiguration {
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|||
}
|
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});
|
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|
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for (File indexDir : sortedIndexDirectories) {
|
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for (final File indexDir : sortedIndexDirectories) {
|
||||
// If the index was last modified before the start time, we know that it doesn't
|
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// contain any data for us to query.
|
||||
if (startTime != null && indexDir.lastModified() < startTime) {
|
||||
|
@ -282,7 +282,7 @@ public class IndexConfiguration {
|
|||
}
|
||||
|
||||
boolean foundIndexCreatedLater = false;
|
||||
for (File indexDir : sortedIndexDirectories) {
|
||||
for (final File indexDir : sortedIndexDirectories) {
|
||||
// If the index was last modified before the log file was created, we know the index doesn't include
|
||||
// any data for the provenance log.
|
||||
if (indexDir.lastModified() < firstEntryTime) {
|
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|
|
|
@ -87,11 +87,13 @@ import org.apache.nifi.provenance.serialization.RecordReader;
|
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import org.apache.nifi.provenance.serialization.RecordReaders;
|
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import org.apache.nifi.provenance.serialization.RecordWriter;
|
||||
import org.apache.nifi.provenance.serialization.RecordWriters;
|
||||
import org.apache.nifi.provenance.toc.TocReader;
|
||||
import org.apache.nifi.provenance.toc.TocUtil;
|
||||
import org.apache.nifi.reporting.Severity;
|
||||
import org.apache.nifi.util.FormatUtils;
|
||||
import org.apache.nifi.util.NiFiProperties;
|
||||
import org.apache.nifi.util.RingBuffer;
|
||||
import org.apache.nifi.util.RingBuffer.ForEachEvaluator;
|
||||
import org.apache.nifi.util.StopWatch;
|
||||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
@ -328,7 +330,7 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
final File journalFile = new File(journalDirectory, String.valueOf(initialRecordId) + ".journal." + i);
|
||||
|
||||
writers[i] = RecordWriters.newRecordWriter(journalFile, false, false);
|
||||
writers[i].writeHeader();
|
||||
writers[i].writeHeader(initialRecordId);
|
||||
}
|
||||
|
||||
logger.info("Created new Provenance Event Writers for events starting with ID {}", initialRecordId);
|
||||
|
@ -361,6 +363,19 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
|
||||
for (final Path path : paths) {
|
||||
try (RecordReader reader = RecordReaders.newRecordReader(path.toFile(), getAllLogFiles())) {
|
||||
// if this is the first record, try to find out the block index and jump directly to
|
||||
// the block index. This avoids having to read through a lot of data that we don't care about
|
||||
// just to get to the first record that we want.
|
||||
if ( records.isEmpty() ) {
|
||||
final TocReader tocReader = reader.getTocReader();
|
||||
if ( tocReader != null ) {
|
||||
final Integer blockIndex = tocReader.getBlockIndexForEventId(firstRecordId);
|
||||
if (blockIndex != null) {
|
||||
reader.skipToBlock(blockIndex);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
StandardProvenanceEventRecord record;
|
||||
while (records.size() < maxRecords && ((record = reader.nextRecord()) != null)) {
|
||||
if (record.getEventId() >= firstRecordId) {
|
||||
|
@ -699,7 +714,7 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
if (bytesWrittenSinceRollover.get() >= configuration.getMaxEventFileCapacity()) {
|
||||
try {
|
||||
rollover(false);
|
||||
} catch (IOException e) {
|
||||
} catch (final IOException e) {
|
||||
logger.error("Failed to Rollover Provenance Event Repository file due to {}", e.toString());
|
||||
logger.error("", e);
|
||||
eventReporter.reportEvent(Severity.ERROR, EVENT_CATEGORY, "Failed to Rollover Provenance Event Repository file due to " + e.toString());
|
||||
|
@ -1001,7 +1016,7 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
if (fileRolledOver == null) {
|
||||
return;
|
||||
}
|
||||
File file = fileRolledOver;
|
||||
final File file = fileRolledOver;
|
||||
|
||||
// update our map of id to Path
|
||||
// need lock to update the map, even though it's an AtomicReference, AtomicReference allows those doing a
|
||||
|
@ -1010,7 +1025,7 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
writeLock.lock();
|
||||
try {
|
||||
final Long fileFirstEventId = Long.valueOf(LuceneUtil.substringBefore(fileRolledOver.getName(), "."));
|
||||
SortedMap<Long, Path> newIdToPathMap = new TreeMap<>(new PathMapComparator());
|
||||
final SortedMap<Long, Path> newIdToPathMap = new TreeMap<>(new PathMapComparator());
|
||||
newIdToPathMap.putAll(idToPathMap.get());
|
||||
newIdToPathMap.put(fileFirstEventId, file.toPath());
|
||||
idToPathMap.set(newIdToPathMap);
|
||||
|
@ -1231,6 +1246,8 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
}
|
||||
});
|
||||
|
||||
long minEventId = 0L;
|
||||
long earliestTimestamp = System.currentTimeMillis();
|
||||
for (final RecordReader reader : readers) {
|
||||
StandardProvenanceEventRecord record = null;
|
||||
|
||||
|
@ -1252,17 +1269,33 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
continue;
|
||||
}
|
||||
|
||||
if ( record.getEventTime() < earliestTimestamp ) {
|
||||
earliestTimestamp = record.getEventTime();
|
||||
}
|
||||
|
||||
if ( record.getEventId() < minEventId ) {
|
||||
minEventId = record.getEventId();
|
||||
}
|
||||
|
||||
recordToReaderMap.put(record, reader);
|
||||
}
|
||||
|
||||
// We want to keep track of the last 1000 events in the files so that we can add them to 'ringBuffer'.
|
||||
// However, we don't want to add them directly to ringBuffer, because once they are added to ringBuffer, they are
|
||||
// available in query results. As a result, we can have the issue where we've not finished indexing the file
|
||||
// but we try to create the lineage for events in that file. In order to avoid this, we will add the records
|
||||
// to a temporary RingBuffer and after we finish merging the records will then copy the data to the
|
||||
// ringBuffer provided as a method argument.
|
||||
final RingBuffer<ProvenanceEventRecord> latestRecords = new RingBuffer<>(1000);
|
||||
|
||||
// loop over each entry in the map, persisting the records to the merged file in order, and populating the map
|
||||
// with the next entry from the journal file from which the previous record was written.
|
||||
try (final RecordWriter writer = RecordWriters.newRecordWriter(writerFile, configuration.isCompressOnRollover(), true)) {
|
||||
writer.writeHeader();
|
||||
writer.writeHeader(minEventId);
|
||||
|
||||
final IndexingAction indexingAction = new IndexingAction(this);
|
||||
|
||||
final File indexingDirectory = indexConfig.getWritableIndexDirectory(writerFile);
|
||||
final File indexingDirectory = indexConfig.getWritableIndexDirectory(writerFile, earliestTimestamp);
|
||||
final IndexWriter indexWriter = indexManager.borrowIndexWriter(indexingDirectory);
|
||||
try {
|
||||
long maxId = 0L;
|
||||
|
@ -1278,7 +1311,7 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
indexingAction.index(record, indexWriter, blockIndex);
|
||||
maxId = record.getEventId();
|
||||
|
||||
ringBuffer.add(record);
|
||||
latestRecords.add(record);
|
||||
records++;
|
||||
|
||||
// Remove this entry from the map
|
||||
|
@ -1303,6 +1336,15 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
indexManager.returnIndexWriter(indexingDirectory, indexWriter);
|
||||
}
|
||||
}
|
||||
|
||||
// record should now be available in the repository. We can copy the values from latestRecords to ringBuffer.
|
||||
latestRecords.forEach(new ForEachEvaluator<ProvenanceEventRecord>() {
|
||||
@Override
|
||||
public boolean evaluate(final ProvenanceEventRecord event) {
|
||||
ringBuffer.add(event);
|
||||
return true;
|
||||
}
|
||||
});
|
||||
} finally {
|
||||
for (final RecordReader reader : readers) {
|
||||
try {
|
||||
|
@ -1452,11 +1494,11 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
try (final DirectoryReader directoryReader = DirectoryReader.open(FSDirectory.open(indexDirectory))) {
|
||||
final IndexSearcher searcher = new IndexSearcher(directoryReader);
|
||||
|
||||
TopDocs topDocs = searcher.search(luceneQuery, 10000000);
|
||||
final TopDocs topDocs = searcher.search(luceneQuery, 10000000);
|
||||
logger.info("For {}, Top Docs has {} hits; reading Lucene results", indexDirectory, topDocs.scoreDocs.length);
|
||||
|
||||
if (topDocs.totalHits > 0) {
|
||||
for (ScoreDoc scoreDoc : topDocs.scoreDocs) {
|
||||
for (final ScoreDoc scoreDoc : topDocs.scoreDocs) {
|
||||
final int docId = scoreDoc.doc;
|
||||
final Document d = directoryReader.document(docId);
|
||||
localScoreDocs.add(d);
|
||||
|
@ -1649,16 +1691,16 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
}
|
||||
|
||||
switch (event.getEventType()) {
|
||||
case CLONE:
|
||||
case FORK:
|
||||
case JOIN:
|
||||
case REPLAY:
|
||||
return submitLineageComputation(event.getChildUuids(), LineageComputationType.EXPAND_CHILDREN, eventId, event.getEventTime(), Long.MAX_VALUE);
|
||||
default:
|
||||
final AsyncLineageSubmission submission = new AsyncLineageSubmission(LineageComputationType.EXPAND_CHILDREN, eventId, Collections.<String>emptyList(), 1);
|
||||
lineageSubmissionMap.put(submission.getLineageIdentifier(), submission);
|
||||
submission.getResult().setError("Event ID " + eventId + " indicates an event of type " + event.getEventType() + " so its children cannot be expanded");
|
||||
return submission;
|
||||
case CLONE:
|
||||
case FORK:
|
||||
case JOIN:
|
||||
case REPLAY:
|
||||
return submitLineageComputation(event.getChildUuids(), LineageComputationType.EXPAND_CHILDREN, eventId, event.getEventTime(), Long.MAX_VALUE);
|
||||
default:
|
||||
final AsyncLineageSubmission submission = new AsyncLineageSubmission(LineageComputationType.EXPAND_CHILDREN, eventId, Collections.<String>emptyList(), 1);
|
||||
lineageSubmissionMap.put(submission.getLineageIdentifier(), submission);
|
||||
submission.getResult().setError("Event ID " + eventId + " indicates an event of type " + event.getEventType() + " so its children cannot be expanded");
|
||||
return submission;
|
||||
}
|
||||
} catch (final IOException ioe) {
|
||||
final AsyncLineageSubmission submission = new AsyncLineageSubmission(LineageComputationType.EXPAND_CHILDREN, eventId, Collections.<String>emptyList(), 1);
|
||||
|
@ -1686,17 +1728,17 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
}
|
||||
|
||||
switch (event.getEventType()) {
|
||||
case JOIN:
|
||||
case FORK:
|
||||
case CLONE:
|
||||
case REPLAY:
|
||||
return submitLineageComputation(event.getParentUuids(), LineageComputationType.EXPAND_PARENTS, eventId, 0L, event.getEventTime());
|
||||
default: {
|
||||
final AsyncLineageSubmission submission = new AsyncLineageSubmission(LineageComputationType.EXPAND_PARENTS, eventId, Collections.<String>emptyList(), 1);
|
||||
lineageSubmissionMap.put(submission.getLineageIdentifier(), submission);
|
||||
submission.getResult().setError("Event ID " + eventId + " indicates an event of type " + event.getEventType() + " so its parents cannot be expanded");
|
||||
return submission;
|
||||
}
|
||||
case JOIN:
|
||||
case FORK:
|
||||
case CLONE:
|
||||
case REPLAY:
|
||||
return submitLineageComputation(event.getParentUuids(), LineageComputationType.EXPAND_PARENTS, eventId, event.getLineageStartDate(), event.getEventTime());
|
||||
default: {
|
||||
final AsyncLineageSubmission submission = new AsyncLineageSubmission(LineageComputationType.EXPAND_PARENTS, eventId, Collections.<String>emptyList(), 1);
|
||||
lineageSubmissionMap.put(submission.getLineageIdentifier(), submission);
|
||||
submission.getResult().setError("Event ID " + eventId + " indicates an event of type " + event.getEventType() + " so its parents cannot be expanded");
|
||||
return submission;
|
||||
}
|
||||
}
|
||||
} catch (final IOException ioe) {
|
||||
final AsyncLineageSubmission submission = new AsyncLineageSubmission(LineageComputationType.EXPAND_PARENTS, eventId, Collections.<String>emptyList(), 1);
|
||||
|
@ -1880,7 +1922,7 @@ public class PersistentProvenanceRepository implements ProvenanceEventRepository
|
|||
}
|
||||
|
||||
try {
|
||||
final Set<ProvenanceEventRecord> matchingRecords = LineageQuery.computeLineageForFlowFiles(PersistentProvenanceRepository.this, indexDir, null, flowFileUuids);
|
||||
final Set<ProvenanceEventRecord> matchingRecords = LineageQuery.computeLineageForFlowFiles(PersistentProvenanceRepository.this, indexManager, indexDir, null, flowFileUuids);
|
||||
final StandardLineageResult result = submission.getResult();
|
||||
result.update(matchingRecords);
|
||||
|
||||
|
|
|
@ -86,16 +86,22 @@ public class StandardRecordWriter implements RecordWriter {
|
|||
}
|
||||
|
||||
@Override
|
||||
public synchronized void writeHeader() throws IOException {
|
||||
public synchronized void writeHeader(final long firstEventId) throws IOException {
|
||||
lastBlockOffset = rawOutStream.getBytesWritten();
|
||||
resetWriteStream();
|
||||
resetWriteStream(firstEventId);
|
||||
|
||||
out.writeUTF(PersistentProvenanceRepository.class.getName());
|
||||
out.writeInt(PersistentProvenanceRepository.SERIALIZATION_VERSION);
|
||||
out.flush();
|
||||
}
|
||||
|
||||
private void resetWriteStream() throws IOException {
|
||||
|
||||
/**
|
||||
* Resets the streams to prepare for a new block
|
||||
* @param eventId the first id that will be written to the new block
|
||||
* @throws IOException if unable to flush/close the current streams properly
|
||||
*/
|
||||
private void resetWriteStream(final long eventId) throws IOException {
|
||||
if ( out != null ) {
|
||||
out.flush();
|
||||
}
|
||||
|
@ -112,13 +118,13 @@ public class StandardRecordWriter implements RecordWriter {
|
|||
}
|
||||
|
||||
if ( tocWriter != null ) {
|
||||
tocWriter.addBlockOffset(rawOutStream.getBytesWritten());
|
||||
tocWriter.addBlockOffset(rawOutStream.getBytesWritten(), eventId);
|
||||
}
|
||||
|
||||
writableStream = new BufferedOutputStream(new GZIPOutputStream(new NonCloseableOutputStream(rawOutStream), 1), 65536);
|
||||
} else {
|
||||
if ( tocWriter != null ) {
|
||||
tocWriter.addBlockOffset(rawOutStream.getBytesWritten());
|
||||
tocWriter.addBlockOffset(rawOutStream.getBytesWritten(), eventId);
|
||||
}
|
||||
|
||||
writableStream = new BufferedOutputStream(rawOutStream, 65536);
|
||||
|
@ -130,7 +136,7 @@ public class StandardRecordWriter implements RecordWriter {
|
|||
|
||||
|
||||
@Override
|
||||
public synchronized long writeRecord(final ProvenanceEventRecord record, long recordIdentifier) throws IOException {
|
||||
public synchronized long writeRecord(final ProvenanceEventRecord record, final long recordIdentifier) throws IOException {
|
||||
final ProvenanceEventType recordType = record.getEventType();
|
||||
final long startBytes = byteCountingOut.getBytesWritten();
|
||||
|
||||
|
@ -142,7 +148,7 @@ public class StandardRecordWriter implements RecordWriter {
|
|||
// because of the way that GZIPOutputStream works, we need to call close() on it in order for it
|
||||
// to write its trailing bytes. But we don't want to close the underlying OutputStream, so we wrap
|
||||
// the underlying OutputStream in a NonCloseableOutputStream
|
||||
resetWriteStream();
|
||||
resetWriteStream(recordIdentifier);
|
||||
}
|
||||
}
|
||||
|
||||
|
|
|
@ -19,26 +19,23 @@ package org.apache.nifi.provenance.lucene;
|
|||
import static java.util.Objects.requireNonNull;
|
||||
|
||||
import java.io.File;
|
||||
import java.io.FileNotFoundException;
|
||||
import java.io.IOException;
|
||||
import java.util.Collection;
|
||||
import java.util.Collections;
|
||||
import java.util.Set;
|
||||
import java.util.concurrent.TimeUnit;
|
||||
import java.util.concurrent.atomic.AtomicInteger;
|
||||
|
||||
import org.apache.nifi.provenance.PersistentProvenanceRepository;
|
||||
import org.apache.nifi.provenance.ProvenanceEventRecord;
|
||||
import org.apache.nifi.provenance.SearchableFields;
|
||||
|
||||
import org.apache.lucene.index.DirectoryReader;
|
||||
import org.apache.lucene.index.IndexReader;
|
||||
import org.apache.lucene.index.Term;
|
||||
import org.apache.lucene.search.BooleanClause.Occur;
|
||||
import org.apache.lucene.search.BooleanQuery;
|
||||
import org.apache.lucene.search.IndexSearcher;
|
||||
import org.apache.lucene.search.TermQuery;
|
||||
import org.apache.lucene.search.TopDocs;
|
||||
import org.apache.lucene.store.Directory;
|
||||
import org.apache.lucene.store.FSDirectory;
|
||||
import org.apache.nifi.provenance.PersistentProvenanceRepository;
|
||||
import org.apache.nifi.provenance.ProvenanceEventRecord;
|
||||
import org.apache.nifi.provenance.SearchableFields;
|
||||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
|
||||
|
@ -48,7 +45,7 @@ public class LineageQuery {
|
|||
public static final int MAX_LINEAGE_UUIDS = 100;
|
||||
private static final Logger logger = LoggerFactory.getLogger(LineageQuery.class);
|
||||
|
||||
public static Set<ProvenanceEventRecord> computeLineageForFlowFiles(final PersistentProvenanceRepository repo, final File indexDirectory,
|
||||
public static Set<ProvenanceEventRecord> computeLineageForFlowFiles(final PersistentProvenanceRepository repo, final IndexManager indexManager, final File indexDirectory,
|
||||
final String lineageIdentifier, final Collection<String> flowFileUuids) throws IOException {
|
||||
if (requireNonNull(flowFileUuids).size() > MAX_LINEAGE_UUIDS) {
|
||||
throw new IllegalArgumentException(String.format("Cannot compute lineage for more than %s FlowFiles. This lineage contains %s.", MAX_LINEAGE_UUIDS, flowFileUuids.size()));
|
||||
|
@ -58,52 +55,62 @@ public class LineageQuery {
|
|||
throw new IllegalArgumentException("Must specify either Lineage Identifier or FlowFile UUIDs to compute lineage");
|
||||
}
|
||||
|
||||
try (final Directory fsDir = FSDirectory.open(indexDirectory);
|
||||
final IndexReader indexReader = DirectoryReader.open(fsDir)) {
|
||||
|
||||
final IndexSearcher searcher = new IndexSearcher(indexReader);
|
||||
|
||||
// Create a query for all Events related to the FlowFiles of interest. We do this by adding all ID's as
|
||||
// "SHOULD" clauses and then setting the minimum required to 1.
|
||||
final BooleanQuery flowFileIdQuery;
|
||||
if (flowFileUuids == null || flowFileUuids.isEmpty()) {
|
||||
flowFileIdQuery = null;
|
||||
} else {
|
||||
flowFileIdQuery = new BooleanQuery();
|
||||
for (final String flowFileUuid : flowFileUuids) {
|
||||
flowFileIdQuery.add(new TermQuery(new Term(SearchableFields.FlowFileUUID.getSearchableFieldName(), flowFileUuid)), Occur.SHOULD);
|
||||
}
|
||||
flowFileIdQuery.setMinimumNumberShouldMatch(1);
|
||||
}
|
||||
|
||||
BooleanQuery query;
|
||||
if (lineageIdentifier == null) {
|
||||
query = flowFileIdQuery;
|
||||
} else {
|
||||
final BooleanQuery lineageIdQuery = new BooleanQuery();
|
||||
lineageIdQuery.add(new TermQuery(new Term(SearchableFields.LineageIdentifier.getSearchableFieldName(), lineageIdentifier)), Occur.MUST);
|
||||
|
||||
if (flowFileIdQuery == null) {
|
||||
query = lineageIdQuery;
|
||||
final IndexSearcher searcher;
|
||||
try {
|
||||
searcher = indexManager.borrowIndexSearcher(indexDirectory);
|
||||
try {
|
||||
// Create a query for all Events related to the FlowFiles of interest. We do this by adding all ID's as
|
||||
// "SHOULD" clauses and then setting the minimum required to 1.
|
||||
final BooleanQuery flowFileIdQuery;
|
||||
if (flowFileUuids == null || flowFileUuids.isEmpty()) {
|
||||
flowFileIdQuery = null;
|
||||
} else {
|
||||
query = new BooleanQuery();
|
||||
query.add(flowFileIdQuery, Occur.SHOULD);
|
||||
query.add(lineageIdQuery, Occur.SHOULD);
|
||||
query.setMinimumNumberShouldMatch(1);
|
||||
flowFileIdQuery = new BooleanQuery();
|
||||
for (final String flowFileUuid : flowFileUuids) {
|
||||
flowFileIdQuery.add(new TermQuery(new Term(SearchableFields.FlowFileUUID.getSearchableFieldName(), flowFileUuid)), Occur.SHOULD);
|
||||
}
|
||||
flowFileIdQuery.setMinimumNumberShouldMatch(1);
|
||||
}
|
||||
|
||||
BooleanQuery query;
|
||||
if (lineageIdentifier == null) {
|
||||
query = flowFileIdQuery;
|
||||
} else {
|
||||
final BooleanQuery lineageIdQuery = new BooleanQuery();
|
||||
lineageIdQuery.add(new TermQuery(new Term(SearchableFields.LineageIdentifier.getSearchableFieldName(), lineageIdentifier)), Occur.MUST);
|
||||
|
||||
if (flowFileIdQuery == null) {
|
||||
query = lineageIdQuery;
|
||||
} else {
|
||||
query = new BooleanQuery();
|
||||
query.add(flowFileIdQuery, Occur.SHOULD);
|
||||
query.add(lineageIdQuery, Occur.SHOULD);
|
||||
query.setMinimumNumberShouldMatch(1);
|
||||
}
|
||||
}
|
||||
|
||||
final long searchStart = System.nanoTime();
|
||||
final TopDocs uuidQueryTopDocs = searcher.search(query, MAX_QUERY_RESULTS);
|
||||
final long searchEnd = System.nanoTime();
|
||||
|
||||
final DocsReader docsReader = new DocsReader(repo.getConfiguration().getStorageDirectories());
|
||||
final Set<ProvenanceEventRecord> recs = docsReader.read(uuidQueryTopDocs, searcher.getIndexReader(), repo.getAllLogFiles(), new AtomicInteger(0), Integer.MAX_VALUE);
|
||||
final long readDocsEnd = System.nanoTime();
|
||||
logger.debug("Finished Lineage Query against {}; Lucene search took {} millis, reading records took {} millis",
|
||||
indexDirectory, TimeUnit.NANOSECONDS.toMillis(searchEnd - searchStart), TimeUnit.NANOSECONDS.toMillis(readDocsEnd - searchEnd));
|
||||
|
||||
return recs;
|
||||
} finally {
|
||||
indexManager.returnIndexSearcher(indexDirectory, searcher);
|
||||
}
|
||||
} catch (final FileNotFoundException fnfe) {
|
||||
// nothing has been indexed yet, or the data has already aged off
|
||||
logger.warn("Attempted to search Provenance Index {} but could not find the file due to {}", indexDirectory, fnfe);
|
||||
if ( logger.isDebugEnabled() ) {
|
||||
logger.warn("", fnfe);
|
||||
}
|
||||
|
||||
final long searchStart = System.nanoTime();
|
||||
final TopDocs uuidQueryTopDocs = searcher.search(query, MAX_QUERY_RESULTS);
|
||||
final long searchEnd = System.nanoTime();
|
||||
|
||||
final DocsReader docsReader = new DocsReader(repo.getConfiguration().getStorageDirectories());
|
||||
final Set<ProvenanceEventRecord> recs = docsReader.read(uuidQueryTopDocs, indexReader, repo.getAllLogFiles(), new AtomicInteger(0), Integer.MAX_VALUE);
|
||||
final long readDocsEnd = System.nanoTime();
|
||||
logger.debug("Finished Lineage Query; Lucene search took {} millis, reading records took {} millis",
|
||||
TimeUnit.NANOSECONDS.toMillis(searchEnd - searchStart), TimeUnit.NANOSECONDS.toMillis(readDocsEnd - searchEnd));
|
||||
|
||||
return recs;
|
||||
return Collections.emptySet();
|
||||
}
|
||||
}
|
||||
|
||||
|
|
|
@ -28,9 +28,10 @@ public interface RecordWriter extends Closeable {
|
|||
/**
|
||||
* Writes header information to the underlying stream
|
||||
*
|
||||
* @param firstEventId the ID of the first provenance event that will be written to the stream
|
||||
* @throws IOException if unable to write header information to the underlying stream
|
||||
*/
|
||||
void writeHeader() throws IOException;
|
||||
void writeHeader(long firstEventId) throws IOException;
|
||||
|
||||
/**
|
||||
* Writes the given record out to the underlying stream
|
||||
|
|
|
@ -37,6 +37,7 @@ import java.io.IOException;
|
|||
public class StandardTocReader implements TocReader {
|
||||
private final boolean compressed;
|
||||
private final long[] offsets;
|
||||
private final long[] firstEventIds;
|
||||
|
||||
public StandardTocReader(final File file) throws IOException {
|
||||
try (final FileInputStream fis = new FileInputStream(file);
|
||||
|
@ -60,11 +61,32 @@ public class StandardTocReader implements TocReader {
|
|||
throw new IOException("Table of Contents appears to be corrupt: could not read 'compression flag' from header; expected value of 0 or 1 but got " + compressionFlag);
|
||||
}
|
||||
|
||||
final int numBlocks = (int) ((file.length() - 2) / 8);
|
||||
final int blockInfoBytes;
|
||||
switch (version) {
|
||||
case 1:
|
||||
blockInfoBytes = 8;
|
||||
break;
|
||||
case 2:
|
||||
default:
|
||||
blockInfoBytes = 16;
|
||||
break;
|
||||
}
|
||||
|
||||
final int numBlocks = (int) ((file.length() - 2) / blockInfoBytes);
|
||||
offsets = new long[numBlocks];
|
||||
|
||||
if ( version > 1 ) {
|
||||
firstEventIds = new long[numBlocks];
|
||||
} else {
|
||||
firstEventIds = new long[0];
|
||||
}
|
||||
|
||||
for (int i=0; i < numBlocks; i++) {
|
||||
offsets[i] = dis.readLong();
|
||||
|
||||
if ( version > 1 ) {
|
||||
firstEventIds[i] = dis.readLong();
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
@ -98,11 +120,36 @@ public class StandardTocReader implements TocReader {
|
|||
public int getBlockIndex(final long blockOffset) {
|
||||
for (int i=0; i < offsets.length; i++) {
|
||||
if ( offsets[i] > blockOffset ) {
|
||||
// if the offset is less than the offset of our first block,
|
||||
// just return 0 to indicate the first block. Otherwise,
|
||||
// return i-1 because i represents the first block whose offset is
|
||||
// greater than 'blockOffset'.
|
||||
return (i == 0) ? 0 : i-1;
|
||||
}
|
||||
}
|
||||
|
||||
// None of the blocks have an offset greater than the provided offset.
|
||||
// Therefore, if the event is present, it must be in the last block.
|
||||
return offsets.length - 1;
|
||||
}
|
||||
|
||||
@Override
|
||||
public Integer getBlockIndexForEventId(final long eventId) {
|
||||
// if we don't have event ID's stored in the TOC (which happens for version 1 of the TOC),
|
||||
// or if the event ID is less than the first Event ID in this TOC, then the Event ID
|
||||
// is unknown -- return null.
|
||||
if ( firstEventIds.length == 0 || eventId < firstEventIds[0] ) {
|
||||
return null;
|
||||
}
|
||||
|
||||
for (int i=1; i < firstEventIds.length; i++) {
|
||||
if ( firstEventIds[i] > eventId ) {
|
||||
return i-1;
|
||||
}
|
||||
}
|
||||
|
||||
return offsets.length - 1;
|
||||
// None of the blocks start with an Event ID greater than the provided ID.
|
||||
// Therefore, if the event is present, it must be in the last block.
|
||||
return firstEventIds.length - 1;
|
||||
}
|
||||
|
||||
}
|
||||
|
|
|
@ -40,7 +40,7 @@ import org.slf4j.LoggerFactory;
|
|||
public class StandardTocWriter implements TocWriter {
|
||||
private static final Logger logger = LoggerFactory.getLogger(StandardTocWriter.class);
|
||||
|
||||
public static final byte VERSION = 1;
|
||||
public static final byte VERSION = 2;
|
||||
|
||||
private final File file;
|
||||
private final FileOutputStream fos;
|
||||
|
@ -75,10 +75,11 @@ public class StandardTocWriter implements TocWriter {
|
|||
}
|
||||
|
||||
@Override
|
||||
public void addBlockOffset(final long offset) throws IOException {
|
||||
public void addBlockOffset(final long offset, final long firstEventId) throws IOException {
|
||||
final BufferedOutputStream bos = new BufferedOutputStream(fos);
|
||||
final DataOutputStream dos = new DataOutputStream(bos);
|
||||
dos.writeLong(offset);
|
||||
dos.writeLong(firstEventId);
|
||||
dos.flush();
|
||||
index++;
|
||||
logger.debug("Adding block {} at offset {}", index, offset);
|
||||
|
|
|
@ -59,4 +59,13 @@ public interface TocReader extends Closeable {
|
|||
* @return the index of the block that contains the given offset
|
||||
*/
|
||||
int getBlockIndex(long blockOffset);
|
||||
|
||||
/**
|
||||
* Returns the block index where the given event ID should be found
|
||||
*
|
||||
* @param eventId the ID of the provenance event of interest
|
||||
* @return the block index where the given event ID should be found, or <code>null</code> if
|
||||
* the block index is not known
|
||||
*/
|
||||
Integer getBlockIndexForEventId(long eventId);
|
||||
}
|
||||
|
|
|
@ -21,16 +21,19 @@ import java.io.File;
|
|||
import java.io.IOException;
|
||||
|
||||
/**
|
||||
* Writes a .toc file
|
||||
* Writes a Table-of-Contents (.toc) file
|
||||
*/
|
||||
public interface TocWriter extends Closeable {
|
||||
|
||||
/**
|
||||
* Adds the given block offset as the next Block Offset in the Table of Contents
|
||||
*
|
||||
* @param offset the byte offset at which the block begins
|
||||
* @param firstEventId the ID of the first Provenance Event that will be in the block
|
||||
*
|
||||
* @throws IOException if unable to persist the block index
|
||||
*/
|
||||
void addBlockOffset(long offset) throws IOException;
|
||||
void addBlockOffset(long offset, long firstEventId) throws IOException;
|
||||
|
||||
/**
|
||||
* @return the index of the current Block
|
||||
|
|
|
@ -67,7 +67,7 @@ public class TestStandardRecordReaderWriter {
|
|||
final TocWriter tocWriter = new StandardTocWriter(tocFile, false, false);
|
||||
final StandardRecordWriter writer = new StandardRecordWriter(journalFile, tocWriter, false, 1024 * 1024);
|
||||
|
||||
writer.writeHeader();
|
||||
writer.writeHeader(1L);
|
||||
writer.writeRecord(createEvent(), 1L);
|
||||
writer.close();
|
||||
|
||||
|
@ -77,7 +77,7 @@ public class TestStandardRecordReaderWriter {
|
|||
final StandardRecordReader reader = new StandardRecordReader(fis, journalFile.getName(), tocReader)) {
|
||||
assertEquals(0, reader.getBlockIndex());
|
||||
reader.skipToBlock(0);
|
||||
StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
final StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
assertNotNull(recovered);
|
||||
|
||||
assertEquals("nifi://unit-test", recovered.getTransitUri());
|
||||
|
@ -95,7 +95,7 @@ public class TestStandardRecordReaderWriter {
|
|||
final TocWriter tocWriter = new StandardTocWriter(tocFile, false, false);
|
||||
final StandardRecordWriter writer = new StandardRecordWriter(journalFile, tocWriter, true, 100);
|
||||
|
||||
writer.writeHeader();
|
||||
writer.writeHeader(1L);
|
||||
writer.writeRecord(createEvent(), 1L);
|
||||
writer.close();
|
||||
|
||||
|
@ -105,7 +105,7 @@ public class TestStandardRecordReaderWriter {
|
|||
final StandardRecordReader reader = new StandardRecordReader(fis, journalFile.getName(), tocReader)) {
|
||||
assertEquals(0, reader.getBlockIndex());
|
||||
reader.skipToBlock(0);
|
||||
StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
final StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
assertNotNull(recovered);
|
||||
|
||||
assertEquals("nifi://unit-test", recovered.getTransitUri());
|
||||
|
@ -124,7 +124,7 @@ public class TestStandardRecordReaderWriter {
|
|||
// new record each 1 MB of uncompressed data
|
||||
final StandardRecordWriter writer = new StandardRecordWriter(journalFile, tocWriter, true, 1024 * 1024);
|
||||
|
||||
writer.writeHeader();
|
||||
writer.writeHeader(1L);
|
||||
for (int i=0; i < 10; i++) {
|
||||
writer.writeRecord(createEvent(), i);
|
||||
}
|
||||
|
@ -143,7 +143,7 @@ public class TestStandardRecordReaderWriter {
|
|||
reader.skipToBlock(0);
|
||||
}
|
||||
|
||||
StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
final StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
assertNotNull(recovered);
|
||||
assertEquals("nifi://unit-test", recovered.getTransitUri());
|
||||
}
|
||||
|
@ -163,7 +163,7 @@ public class TestStandardRecordReaderWriter {
|
|||
// new block each 10 bytes
|
||||
final StandardRecordWriter writer = new StandardRecordWriter(journalFile, tocWriter, true, 100);
|
||||
|
||||
writer.writeHeader();
|
||||
writer.writeHeader(1L);
|
||||
for (int i=0; i < 10; i++) {
|
||||
writer.writeRecord(createEvent(), i);
|
||||
}
|
||||
|
@ -174,7 +174,7 @@ public class TestStandardRecordReaderWriter {
|
|||
try (final FileInputStream fis = new FileInputStream(journalFile);
|
||||
final StandardRecordReader reader = new StandardRecordReader(fis, journalFile.getName(), tocReader)) {
|
||||
for (int i=0; i < 10; i++) {
|
||||
StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
final StandardProvenanceEventRecord recovered = reader.nextRecord();
|
||||
System.out.println(recovered);
|
||||
assertNotNull(recovered);
|
||||
assertEquals((long) i, recovered.getEventId());
|
||||
|
|
|
@ -64,11 +64,11 @@ public class TestStandardTocReader {
|
|||
|
||||
|
||||
@Test
|
||||
public void testGetBlockIndex() throws IOException {
|
||||
public void testGetBlockIndexV1() throws IOException {
|
||||
final File file = new File("target/" + UUID.randomUUID().toString());
|
||||
try (final OutputStream out = new FileOutputStream(file);
|
||||
final DataOutputStream dos = new DataOutputStream(out)) {
|
||||
out.write(0);
|
||||
out.write(1);
|
||||
out.write(0);
|
||||
|
||||
for (int i=0; i < 1024; i++) {
|
||||
|
@ -88,4 +88,31 @@ public class TestStandardTocReader {
|
|||
file.delete();
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testGetBlockIndexV2() throws IOException {
|
||||
final File file = new File("target/" + UUID.randomUUID().toString());
|
||||
try (final OutputStream out = new FileOutputStream(file);
|
||||
final DataOutputStream dos = new DataOutputStream(out)) {
|
||||
out.write(2);
|
||||
out.write(0);
|
||||
|
||||
for (int i=0; i < 1024; i++) {
|
||||
dos.writeLong(i * 1024L);
|
||||
dos.writeLong(0L);
|
||||
}
|
||||
}
|
||||
|
||||
try {
|
||||
try(final StandardTocReader reader = new StandardTocReader(file)) {
|
||||
assertFalse(reader.isCompressed());
|
||||
|
||||
for (int i=0; i < 1024; i++) {
|
||||
assertEquals(i * 1024, reader.getBlockOffset(i));
|
||||
}
|
||||
}
|
||||
} finally {
|
||||
file.delete();
|
||||
}
|
||||
}
|
||||
}
|
||||
|
|
|
@ -66,43 +66,43 @@ import org.apache.nifi.processor.util.StandardValidators;
|
|||
public class ExecuteProcess extends AbstractProcessor {
|
||||
|
||||
public static final PropertyDescriptor COMMAND = new PropertyDescriptor.Builder()
|
||||
.name("Command")
|
||||
.description("Specifies the command to be executed; if just the name of an executable is provided, it must be in the user's environment PATH.")
|
||||
.required(true)
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.NON_EMPTY_VALIDATOR)
|
||||
.build();
|
||||
.name("Command")
|
||||
.description("Specifies the command to be executed; if just the name of an executable is provided, it must be in the user's environment PATH.")
|
||||
.required(true)
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.NON_EMPTY_VALIDATOR)
|
||||
.build();
|
||||
|
||||
public static final PropertyDescriptor COMMAND_ARGUMENTS = new PropertyDescriptor.Builder()
|
||||
.name("Command Arguments")
|
||||
.description("The arguments to supply to the executable delimited by white space. White space can be escaped by enclosing it in double-quotes.")
|
||||
.required(false)
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.NON_EMPTY_VALIDATOR)
|
||||
.build();
|
||||
.name("Command Arguments")
|
||||
.description("The arguments to supply to the executable delimited by white space. White space can be escaped by enclosing it in double-quotes.")
|
||||
.required(false)
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.NON_EMPTY_VALIDATOR)
|
||||
.build();
|
||||
|
||||
public static final PropertyDescriptor WORKING_DIR = new PropertyDescriptor.Builder()
|
||||
.name("Working Directory")
|
||||
.description("The directory to use as the current working directory when executing the command")
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.createDirectoryExistsValidator(false, true))
|
||||
.required(false)
|
||||
.build();
|
||||
.name("Working Directory")
|
||||
.description("The directory to use as the current working directory when executing the command")
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.createDirectoryExistsValidator(false, true))
|
||||
.required(false)
|
||||
.build();
|
||||
|
||||
public static final PropertyDescriptor BATCH_DURATION = new PropertyDescriptor.Builder()
|
||||
.name("Batch Duration")
|
||||
.description("If the process is expected to be long-running and produce textual output, a batch duration can be specified so "
|
||||
+ "that the output will be captured for this amount of time and a FlowFile will then be sent out with the results "
|
||||
+ "and a new FlowFile will be started, rather than waiting for the process to finish before sending out the results")
|
||||
.name("Batch Duration")
|
||||
.description("If the process is expected to be long-running and produce textual output, a batch duration can be specified so "
|
||||
+ "that the output will be captured for this amount of time and a FlowFile will then be sent out with the results "
|
||||
+ "and a new FlowFile will be started, rather than waiting for the process to finish before sending out the results")
|
||||
.required(false)
|
||||
.expressionLanguageSupported(false)
|
||||
.addValidator(StandardValidators.TIME_PERIOD_VALIDATOR)
|
||||
.build();
|
||||
|
||||
public static final PropertyDescriptor REDIRECT_ERROR_STREAM = new PropertyDescriptor.Builder()
|
||||
.name("Redirect Error Stream")
|
||||
.description("If true will redirect any error stream output of the process to the output stream. "
|
||||
+ "This is particularly helpful for processes which write extensively to the error stream or for troubleshooting.")
|
||||
.name("Redirect Error Stream")
|
||||
.description("If true will redirect any error stream output of the process to the output stream. "
|
||||
+ "This is particularly helpful for processes which write extensively to the error stream or for troubleshooting.")
|
||||
.required(false)
|
||||
.allowableValues("true", "false")
|
||||
.defaultValue("false")
|
||||
|
@ -111,11 +111,14 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
.build();
|
||||
|
||||
public static final Relationship REL_SUCCESS = new Relationship.Builder()
|
||||
.name("success")
|
||||
.description("All created FlowFiles are routed to this relationship")
|
||||
.build();
|
||||
.name("success")
|
||||
.description("All created FlowFiles are routed to this relationship")
|
||||
.build();
|
||||
|
||||
private volatile ExecutorService executor;
|
||||
private Future<?> longRunningProcess;
|
||||
private AtomicBoolean failure = new AtomicBoolean(false);
|
||||
private volatile ProxyOutputStream proxyOut;
|
||||
|
||||
@Override
|
||||
public Set<Relationship> getRelationships() {
|
||||
|
@ -135,11 +138,11 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
@Override
|
||||
protected PropertyDescriptor getSupportedDynamicPropertyDescriptor(final String propertyDescriptorName) {
|
||||
return new PropertyDescriptor.Builder()
|
||||
.name(propertyDescriptorName)
|
||||
.description("Sets the environment variable '" + propertyDescriptorName + "' for the process' environment")
|
||||
.dynamic(true)
|
||||
.addValidator(StandardValidators.NON_EMPTY_VALIDATOR)
|
||||
.build();
|
||||
.name(propertyDescriptorName)
|
||||
.description("Sets the environment variable '" + propertyDescriptorName + "' for the process' environment")
|
||||
.dynamic(true)
|
||||
.addValidator(StandardValidators.NON_EMPTY_VALIDATOR)
|
||||
.build();
|
||||
}
|
||||
|
||||
static List<String> splitArgs(final String input) {
|
||||
|
@ -209,15 +212,99 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
|
||||
@Override
|
||||
public void onTrigger(final ProcessContext context, final ProcessSession session) throws ProcessException {
|
||||
if (proxyOut==null) {
|
||||
proxyOut = new ProxyOutputStream(getLogger());
|
||||
}
|
||||
|
||||
final Long batchNanos = context.getProperty(BATCH_DURATION).asTimePeriod(TimeUnit.NANOSECONDS);
|
||||
|
||||
final List<String> commandStrings = createCommandStrings(context);
|
||||
final String commandString = StringUtils.join(commandStrings, " ");
|
||||
|
||||
if (longRunningProcess == null || longRunningProcess.isDone()) {
|
||||
try {
|
||||
longRunningProcess = launchProcess(context, commandStrings, batchNanos, proxyOut);
|
||||
} catch (final IOException ioe) {
|
||||
getLogger().error("Failed to create process due to {}", new Object[] { ioe });
|
||||
context.yield();
|
||||
return;
|
||||
}
|
||||
} else {
|
||||
getLogger().info("Read from long running process");
|
||||
}
|
||||
|
||||
if (!isScheduled()) {
|
||||
getLogger().info("User stopped processor; will terminate process immediately");
|
||||
longRunningProcess.cancel(true);
|
||||
return;
|
||||
}
|
||||
|
||||
// Create a FlowFile that we can write to and set the OutputStream for the FlowFile
|
||||
// as the delegate for the ProxyOuptutStream, then wait until the process finishes
|
||||
// or until the specified amount of time
|
||||
FlowFile flowFile = session.create();
|
||||
flowFile = session.write(flowFile, new OutputStreamCallback() {
|
||||
@Override
|
||||
public void process(final OutputStream flowFileOut) throws IOException {
|
||||
try (final OutputStream out = new BufferedOutputStream(flowFileOut)) {
|
||||
proxyOut.setDelegate(out);
|
||||
|
||||
if (batchNanos == null) {
|
||||
// we are not creating batches; wait until process terminates.
|
||||
// NB!!! Maybe get(long timeout, TimeUnit unit) should
|
||||
// be used to avoid waiting forever.
|
||||
try {
|
||||
longRunningProcess.get();
|
||||
} catch (final InterruptedException ie) {
|
||||
} catch (final ExecutionException ee) {
|
||||
getLogger().error("Process execution failed due to {}", new Object[] { ee.getCause() });
|
||||
}
|
||||
} else {
|
||||
// wait the allotted amount of time.
|
||||
try {
|
||||
TimeUnit.NANOSECONDS.sleep(batchNanos);
|
||||
} catch (final InterruptedException ie) {
|
||||
}
|
||||
}
|
||||
|
||||
proxyOut.setDelegate(null); // prevent from writing to this
|
||||
// stream
|
||||
}
|
||||
}
|
||||
});
|
||||
|
||||
if (flowFile.getSize() == 0L) {
|
||||
// If no data was written to the file, remove it
|
||||
session.remove(flowFile);
|
||||
} else if (failure.get()) {
|
||||
// If there was a failure processing the output of the Process, remove the FlowFile
|
||||
session.remove(flowFile);
|
||||
getLogger().error("Failed to read data from Process, so will not generate FlowFile");
|
||||
} else {
|
||||
// All was good. Generate event and transfer FlowFile.
|
||||
session.getProvenanceReporter().create(flowFile, "Created from command: " + commandString);
|
||||
getLogger().info("Created {} and routed to success", new Object[] { flowFile });
|
||||
session.transfer(flowFile, REL_SUCCESS);
|
||||
}
|
||||
|
||||
// Commit the session so that the FlowFile is transferred to the next processor
|
||||
session.commit();
|
||||
}
|
||||
|
||||
protected List<String> createCommandStrings(final ProcessContext context) {
|
||||
final String command = context.getProperty(COMMAND).getValue();
|
||||
final List<String> args = splitArgs(context.getProperty(COMMAND_ARGUMENTS).getValue());
|
||||
final Boolean redirectErrorStream = context.getProperty(REDIRECT_ERROR_STREAM).asBoolean();
|
||||
|
||||
final List<String> commandStrings = new ArrayList<>(args.size() + 1);
|
||||
commandStrings.add(command);
|
||||
commandStrings.addAll(args);
|
||||
return commandStrings;
|
||||
}
|
||||
|
||||
final String commandString = StringUtils.join(commandStrings, " ");
|
||||
protected Future<?> launchProcess(final ProcessContext context, final List<String> commandStrings, final Long batchNanos,
|
||||
final ProxyOutputStream proxyOut) throws IOException {
|
||||
|
||||
final Boolean redirectErrorStream = context.getProperty(REDIRECT_ERROR_STREAM).asBoolean();
|
||||
|
||||
final ProcessBuilder builder = new ProcessBuilder(commandStrings);
|
||||
final String workingDirName = context.getProperty(WORKING_DIR).getValue();
|
||||
|
@ -236,24 +323,15 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
builder.environment().putAll(environment);
|
||||
}
|
||||
|
||||
final long startNanos = System.nanoTime();
|
||||
final Process process;
|
||||
try {
|
||||
process = builder.redirectErrorStream(redirectErrorStream).start();
|
||||
} catch (final IOException ioe) {
|
||||
getLogger().error("Failed to create process due to {}", new Object[]{ioe});
|
||||
context.yield();
|
||||
return;
|
||||
}
|
||||
|
||||
final Long batchNanos = context.getProperty(BATCH_DURATION).asTimePeriod(TimeUnit.NANOSECONDS);
|
||||
getLogger().info("Start creating new Process > {} ", new Object[] { commandStrings });
|
||||
final Process newProcess = builder.redirectErrorStream(redirectErrorStream).start();
|
||||
|
||||
// Submit task to read error stream from process
|
||||
if (!redirectErrorStream) {
|
||||
executor.submit(new Runnable() {
|
||||
@Override
|
||||
public void run() {
|
||||
try (final BufferedReader reader = new BufferedReader(new InputStreamReader(process.getErrorStream()))) {
|
||||
try (final BufferedReader reader = new BufferedReader(new InputStreamReader(newProcess.getErrorStream()))) {
|
||||
while (reader.read() >= 0) {
|
||||
}
|
||||
} catch (final IOException ioe) {
|
||||
|
@ -263,19 +341,25 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
}
|
||||
|
||||
// Submit task to read output of Process and write to FlowFile.
|
||||
final ProxyOutputStream proxyOut = new ProxyOutputStream(getLogger());
|
||||
final AtomicBoolean failure = new AtomicBoolean(false);
|
||||
final AtomicBoolean finishedCopying = new AtomicBoolean(false);
|
||||
failure = new AtomicBoolean(false);
|
||||
final Future<?> future = executor.submit(new Callable<Object>() {
|
||||
@Override
|
||||
public Object call() throws IOException {
|
||||
try {
|
||||
if (batchNanos == null) {
|
||||
// if we aren't batching, just copy the stream from the process to the flowfile.
|
||||
try (final BufferedInputStream bufferedIn = new BufferedInputStream(process.getInputStream())) {
|
||||
// if we aren't batching, just copy the stream from the
|
||||
// process to the flowfile.
|
||||
try (final BufferedInputStream bufferedIn = new BufferedInputStream(newProcess.getInputStream())) {
|
||||
final byte[] buffer = new byte[4096];
|
||||
int len;
|
||||
while ((len = bufferedIn.read(buffer)) > 0) {
|
||||
|
||||
// NB!!!! Maybe all data should be read from
|
||||
// input stream in case of !isScheduled() to
|
||||
// avoid subprocess deadlock?
|
||||
// (we just don't write data to proxyOut)
|
||||
// Or because we don't use this subprocess
|
||||
// anymore anyway, we don't care?
|
||||
if (!isScheduled()) {
|
||||
return null;
|
||||
}
|
||||
|
@ -284,12 +368,15 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
}
|
||||
}
|
||||
} else {
|
||||
// we are batching, which means that the output of the process is text. It doesn't make sense to grab
|
||||
// arbitrary batches of bytes from some process and send it along as a piece of data, so we assume that
|
||||
// we are batching, which means that the output of the
|
||||
// process is text. It doesn't make sense to grab
|
||||
// arbitrary batches of bytes from some process and send
|
||||
// it along as a piece of data, so we assume that
|
||||
// setting a batch during means text.
|
||||
// Also, we don't want that text to get split up in the middle of a line, so we use BufferedReader
|
||||
// Also, we don't want that text to get split up in the
|
||||
// middle of a line, so we use BufferedReader
|
||||
// to read lines of text and write them as lines of text.
|
||||
try (final BufferedReader reader = new BufferedReader(new InputStreamReader(process.getInputStream()))) {
|
||||
try (final BufferedReader reader = new BufferedReader(new InputStreamReader(newProcess.getInputStream()))) {
|
||||
String line;
|
||||
|
||||
while ((line = reader.readLine()) != null) {
|
||||
|
@ -305,108 +392,22 @@ public class ExecuteProcess extends AbstractProcessor {
|
|||
failure.set(true);
|
||||
throw ioe;
|
||||
} finally {
|
||||
finishedCopying.set(true);
|
||||
int exitCode;
|
||||
try {
|
||||
exitCode = newProcess.exitValue();
|
||||
} catch (final Exception e) {
|
||||
exitCode = -99999;
|
||||
}
|
||||
getLogger().info("Process finished with exit code {} ", new Object[] { exitCode });
|
||||
}
|
||||
|
||||
return null;
|
||||
}
|
||||
});
|
||||
|
||||
// continue to do this loop until both the process has finished and we have finished copying
|
||||
// the output from the process to the FlowFile. Unfortunately, even after calling Process.exitValue(),
|
||||
// there can be data buffered on the InputStream; so we will wait until the stream is empty as well.
|
||||
int flowFileCount = 0;
|
||||
while (!finishedCopying.get() || isAlive(process)) {
|
||||
if (!isScheduled()) {
|
||||
getLogger().info("User stopped processor; will terminate process immediately");
|
||||
process.destroy();
|
||||
break;
|
||||
}
|
||||
|
||||
// Create a FlowFile that we can write to and set the OutputStream for the FlowFile
|
||||
// as the delegate for the ProxyOuptutStream, then wait until the process finishes
|
||||
// or until the specified amount of time
|
||||
FlowFile flowFile = session.create();
|
||||
flowFile = session.write(flowFile, new OutputStreamCallback() {
|
||||
@Override
|
||||
public void process(final OutputStream flowFileOut) throws IOException {
|
||||
try (final OutputStream out = new BufferedOutputStream(flowFileOut)) {
|
||||
proxyOut.setDelegate(out);
|
||||
|
||||
if (batchNanos == null) {
|
||||
// we are not creating batches; wait until process terminates.
|
||||
Integer exitCode = null;
|
||||
while (exitCode == null) {
|
||||
try {
|
||||
exitCode = process.waitFor();
|
||||
} catch (final InterruptedException ie) {
|
||||
}
|
||||
}
|
||||
} else {
|
||||
// wait the allotted amount of time.
|
||||
try {
|
||||
TimeUnit.NANOSECONDS.sleep(batchNanos);
|
||||
} catch (final InterruptedException ie) {
|
||||
}
|
||||
}
|
||||
|
||||
proxyOut.setDelegate(null); // prevent from writing to this stream
|
||||
}
|
||||
}
|
||||
});
|
||||
|
||||
if (flowFile.getSize() == 0L) {
|
||||
// If no data was written to the file, remove it
|
||||
session.remove(flowFile);
|
||||
} else if (failure.get()) {
|
||||
// If there was a failure processing the output of the Process, remove the FlowFile
|
||||
session.remove(flowFile);
|
||||
getLogger().error("Failed to read data from Process, so will not generate FlowFile");
|
||||
break;
|
||||
} else {
|
||||
// All was good. Generate event and transfer FlowFile.
|
||||
session.getProvenanceReporter().create(flowFile, "Created from command: " + commandString);
|
||||
getLogger().info("Created {} and routed to success", new Object[]{flowFile});
|
||||
session.transfer(flowFile, REL_SUCCESS);
|
||||
flowFileCount++;
|
||||
}
|
||||
|
||||
// Commit the session so that the FlowFile is transferred to the next processor
|
||||
session.commit();
|
||||
}
|
||||
|
||||
final int exitCode;
|
||||
final long millis = TimeUnit.NANOSECONDS.toMillis(System.nanoTime() - startNanos);
|
||||
try {
|
||||
exitCode = process.waitFor();
|
||||
} catch (final InterruptedException ie) {
|
||||
getLogger().warn("Process was interrupted before finishing");
|
||||
return;
|
||||
}
|
||||
|
||||
try {
|
||||
future.get();
|
||||
} catch (final ExecutionException e) {
|
||||
getLogger().error("Failed to copy output from Process to FlowFile due to {}", new Object[]{e.getCause()});
|
||||
} catch (final InterruptedException ie) {
|
||||
getLogger().error("Interrupted while waiting to copy data form Process to FlowFile");
|
||||
return;
|
||||
}
|
||||
|
||||
getLogger().info("Process finished with exit code {} after creating {} FlowFiles in {} millis", new Object[]{exitCode, flowFileCount, millis});
|
||||
return future;
|
||||
}
|
||||
|
||||
private boolean isAlive(final Process process) {
|
||||
// unfortunately, java provides no straight-forward way to test if a Process is alive.
|
||||
// In Java 8, Process.isAlive() is introduced, but NiFi needs to run against Java 7,
|
||||
// so we have this solution in the mean time.
|
||||
try {
|
||||
process.exitValue();
|
||||
return false;
|
||||
} catch (final IllegalThreadStateException itse) {
|
||||
return true;
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Output stream that is used to wrap another output stream in a way that the underlying output stream can be swapped out for a different one when needed
|
||||
|
|
|
@ -20,11 +20,14 @@ import static org.junit.Assert.assertEquals;
|
|||
import static org.junit.Assert.assertNotNull;
|
||||
import static org.junit.Assert.assertTrue;
|
||||
|
||||
import java.io.File;
|
||||
import java.util.List;
|
||||
|
||||
import org.apache.nifi.processor.ProcessContext;
|
||||
import org.apache.nifi.util.MockFlowFile;
|
||||
import org.apache.nifi.util.TestRunner;
|
||||
import org.apache.nifi.util.TestRunners;
|
||||
import org.junit.Ignore;
|
||||
import org.junit.Test;
|
||||
|
||||
public class TestExecuteProcess {
|
||||
|
@ -58,6 +61,7 @@ public class TestExecuteProcess {
|
|||
assertEquals("good bye", twoQuotedArg.get(1));
|
||||
}
|
||||
|
||||
@Ignore // won't run under Windows
|
||||
@Test
|
||||
public void testEcho() {
|
||||
System.setProperty("org.slf4j.simpleLogger.log.org.apache.nifi", "TRACE");
|
||||
|
@ -75,4 +79,82 @@ public class TestExecuteProcess {
|
|||
System.out.println(new String(flowFile.toByteArray()));
|
||||
}
|
||||
}
|
||||
|
||||
// @Test
|
||||
public void testBigBinaryInputData() {
|
||||
System.setProperty("org.slf4j.simpleLogger.log.org.apache.nifi", "TRACE");
|
||||
System.setProperty("org.slf4j.simpleLogger.log.org.apache.nifi.processors.standard", "DEBUG");
|
||||
|
||||
String workingDirName = "/var/test";
|
||||
String testFile = "eclipse-java-luna-SR2-win32.zip";
|
||||
|
||||
final TestRunner runner = TestRunners.newTestRunner(ExecuteProcess.class);
|
||||
runner.setProperty(ExecuteProcess.COMMAND, "cmd");
|
||||
runner.setProperty(ExecuteProcess.COMMAND_ARGUMENTS, " /c type " + testFile);
|
||||
runner.setProperty(ExecuteProcess.WORKING_DIR, workingDirName);
|
||||
|
||||
File inFile = new File(workingDirName, testFile);
|
||||
System.out.println(inFile.getAbsolutePath());
|
||||
|
||||
runner.run();
|
||||
|
||||
final List<MockFlowFile> flowFiles = runner.getFlowFilesForRelationship(ExecuteProcess.REL_SUCCESS);
|
||||
long totalFlowFilesSize = 0;
|
||||
for (final MockFlowFile flowFile : flowFiles) {
|
||||
System.out.println(flowFile);
|
||||
totalFlowFilesSize += flowFile.getSize();
|
||||
// System.out.println(new String(flowFile.toByteArray()));
|
||||
}
|
||||
|
||||
assertEquals(inFile.length(), totalFlowFilesSize);
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testBigInputSplit() {
|
||||
System.setProperty("org.slf4j.simpleLogger.log.org.apache.nifi", "TRACE");
|
||||
System.setProperty("org.slf4j.simpleLogger.log.org.apache.nifi.processors.standard", "DEBUG");
|
||||
|
||||
String workingDirName = "/var/test";
|
||||
String testFile = "Novo_dicionário_da_língua_portuguesa_by_Cândido_de_Figueiredo.txt";
|
||||
// String testFile = "eclipse-java-luna-SR2-win32.zip";
|
||||
|
||||
final TestRunner runner = TestRunners.newTestRunner(ExecuteProcess.class);
|
||||
runner.setProperty(ExecuteProcess.COMMAND, "cmd");
|
||||
runner.setProperty(ExecuteProcess.COMMAND_ARGUMENTS, " /c type " + testFile);
|
||||
runner.setProperty(ExecuteProcess.WORKING_DIR, workingDirName);
|
||||
runner.setProperty(ExecuteProcess.BATCH_DURATION, "150 millis");
|
||||
|
||||
File inFile = new File(workingDirName, testFile);
|
||||
System.out.println(inFile.getAbsolutePath());
|
||||
|
||||
// runner.run(1,false,true);
|
||||
|
||||
ProcessContext processContext = runner.getProcessContext();
|
||||
|
||||
ExecuteProcess processor = (ExecuteProcess) runner.getProcessor();
|
||||
processor.updateScheduledTrue();
|
||||
processor.setupExecutor(processContext);
|
||||
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
processor.onTrigger(processContext, runner.getProcessSessionFactory());
|
||||
|
||||
// runner.run(5,true,false);
|
||||
|
||||
final List<MockFlowFile> flowFiles = runner.getFlowFilesForRelationship(ExecuteProcess.REL_SUCCESS);
|
||||
long totalFlowFilesSize = 0;
|
||||
for (final MockFlowFile flowFile : flowFiles) {
|
||||
System.out.println(flowFile);
|
||||
totalFlowFilesSize += flowFile.getSize();
|
||||
// System.out.println(new String(flowFile.toByteArray()));
|
||||
}
|
||||
|
||||
// assertEquals(inFile.length(), totalFlowFilesSize);
|
||||
}
|
||||
}
|
||||
|
|
Loading…
Reference in New Issue