Commit Graph

2875 Commits

Author SHA1 Message Date
Armin Braun 21515b9ff1
Fix IpFilteringIntegrationTests (#43019) (#43434)
* Increase timeout to 5s since we saw 500ms+ GC pauses on CI
* closes #40689
2019-06-20 22:31:59 +02:00
Yannick Welsch 7f8e1454ab Advance checkpoints only after persisting ops (#43205)
Local and global checkpoints currently do not correctly reflect what's persisted to disk. The issue is
that the local checkpoint is adapted as soon as an operation is processed (but not fsynced yet). This
leaves room for the history below the global checkpoint to still change in case of a crash. As we rely
on global checkpoints for CCR as well as operation-based recoveries, this has the risk of shard
copies / follower clusters going out of sync.

This commit required changing some core classes in the system:

- The LocalCheckpointTracker keeps track now not only of the information whether an operation has
been processed, but also whether that operation has been persisted to disk.
- TranslogWriter now keeps track of the sequence numbers that have not been fsynced yet. Once
they are fsynced, TranslogWriter notifies LocalCheckpointTracker of this.
- ReplicationTracker now keeps track of the persisted local and persisted global checkpoints of all
shard copies when in primary mode. The computed global checkpoint (which represents the
minimum of all persisted local checkpoints of all in-sync shard copies), which was previously stored
in the checkpoint entry for the local shard copy, has been moved to an extra field.
- The periodic global checkpoint sync now also takes async durability into account, where the local
checkpoints on shards only advance when the translog is asynchronously fsynced. This means that
the previous condition to detect inactivity (max sequence number is equal to global checkpoint) is
not sufficient anymore.
- The new index closing API does not work when combined with async durability. The shard
verification step is now requires an additional pre-flight step to fsync the translog, so that the main
verify shard step has the most up-to-date global checkpoint at disposition.
2019-06-20 11:12:38 +02:00
Andrei Stefan fe0f9055d8 Fix NPE in case of subsequent scrolled requests for a CSV/TSV formatted response (#43365)
(cherry picked from commit 0ef7bb0f8b07cd0392d37f96ca9360821b19315a)
2019-06-20 11:26:11 +03:00
Jason Tedor 1f1a035def
Remove stale test logging annotations (#43403)
This commit removes some very old test logging annotations that appeared
to be added to investigate test failures that are long since closed. If
these are needed, they can be added back on a case-by-case basis with a
comment associating them to a test failure.
2019-06-19 22:58:22 -04:00
Lee Hinman c2bf628a6d
[7.x] Narrow period of Shrink action in which ILM prevents stopping (#43254) (#43393)
* Narrow period of Shrink action in which ILM prevents stopping

Prior to this change, we would prevent stopping of ILM if the index was
anywhere in the shrink action. This commit changes
`IndexLifecycleService` to allow stopping when in any of the innocuous
steps during shrink. This changes ILM only to prevent stopping if
absolutely necessary.

Resolves #43253

* Rename variable for ignore actions -> ignore steps

* Fix comment

* Factor test out to test *all* stoppable steps
2019-06-19 16:37:41 -06:00
Benjamin Trent 77ce3260dd
[ML][Data Frame] make response.count be total count of hits (#43241) (#43389)
* [ML][Data Frame] make response.count be total count of hits

* addressing line length check

* changing response count for filters

* adjusting serialization, variable name, and total count logic

* making count mandatory for creation
2019-06-19 16:19:06 -05:00
Benjamin Trent b333ced5a7
[7.x] [ML][Data Frame] adds new pipeline field to dest config (#43124) (#43388)
* [ML][Data Frame] adds new pipeline field to dest config (#43124)

* [ML][Data Frame] adds new pipeline field to dest config

* Adding pipeline support to _preview

* removing unused import

* moving towards extracting _source from pipeline simulation

* fixing permission requirement, adding _index entry to doc

* adjusting for java 8 compatibility

* adjusting bwc serialization version to 7.3.0
2019-06-19 16:18:27 -05:00
Christos Soulios d1637ca476
Backport: Refactor aggregation base classes to remove doEquals() and doHashCode() (#43363)
This PR is a backport a of #43214 from v8.0.0

A number of the aggregation base classes have an abstract doEquals() and doHashCode() (e.g. InternalAggregation.java, AbstractPipelineAggregationBuilder.java).

Theoretically this is so the sub-classes can add to the equals/hashCode and don't need to worry about calling super.equals(). In practice, it's mostly just confusing/inconsistent. And if there are more than two levels, we end up with situations like InternalMappedSignificantTerms which has to call super.doEquals() which defeats the point of having these overridable methods.

This PR removes the do versions and just use equals/hashCode ensuring the super when necessary.
2019-06-19 22:31:06 +03:00
Lee Hinman d81ce9a647 Return 0 for negative "free" and "total" memory reported by the OS (#42725)
* Return 0 for negative "free" and "total" memory reported by the OS

We've had a situation where the MX bean reported negative values for the
free memory of the OS, in those rare cases we want to return a value of
0 rather than blowing up later down the pipeline.

In the event that there is a serialization or creation error with regard
to memory use, this adds asserts so the failure will occur as soon as
possible and give us a better location for investigation.

Resolves #42157

* Fix test passing in invalid memory value

* Fix another test passing in invalid memory value

* Also change mem check in MachineLearning.machineMemoryFromStats

* Add background documentation for why we prevent negative return values

* Clarify comment a bit more
2019-06-19 10:35:48 -06:00
Gordon Brown 23a3471394
Fix randomization in testPerformActionAttrsRequestFails (#43304)
The randomization in this test would occasionally generate duplicate
node attribute keys, causing spurious test failures. This commit adjusts
the randomization to not generate duplicate keys and cleans up the data
structure used to hold the generated keys.
2019-06-19 10:34:39 -06:00
Martijn van Groningen a4c45b5d70
Replace Streamable w/ Writeable in SingleShardRequest and subclasses (#43222) (#43364)
Backport of: https://github.com/elastic/elasticsearch/pull/43222

This commit replaces usages of Streamable with Writeable for the
SingleShardRequest / TransportSingleShardAction classes and subclasses of
these classes.

Note that where possible response fields were made final and default
constructors were removed.

Relates to #34389
2019-06-19 16:15:09 +02:00
Przemysław Witek 86b58d9ff3
Rename AutoDetectResultProcessor* to AutodetectResultProcessor* for consistency with other classes where the spelling is "Autodetect" (#43359) (#43366) 2019-06-19 15:31:26 +02:00
Yogesh Gaikwad 2f173402ec
Add kerberos grant_type to get token in exchange for Kerberos ticket (#42847) (#43355)
Kibana wants to create access_token/refresh_token pair using Token
management APIs in exchange for kerberos tickets. `client_credentials`
grant_type requires every user to have `cluster:admin/xpack/security/token/create`
cluster privilege.

This commit introduces `_kerberos` grant_type for generating `access_token`
and `refresh_token` in exchange for a valid base64 encoded kerberos ticket.
In addition, `kibana_user` role now has cluster privilege to create tokens.
This allows Kibana to create access_token/refresh_token pair in exchange for
kerberos tickets.

Note:
The lifetime from the kerberos ticket is not used in ES and so even after it expires
the access_token/refresh_token pair will be valid. Care must be taken to invalidate
such tokens using token management APIs if required.

Closes #41943
2019-06-19 18:26:52 +10:00
Jason Tedor fa09113080 Remove trace logging for ML native multi-node tests
This trace logging looks like it was copy/pasted from another test,
where the logging in that test was only added to investigate a test
failure. This commit removes the trace logging.
2019-06-18 22:28:27 -04:00
Jason Tedor b98574240d Remove trace logging from ML datafeeds in tests
This was added to investigate a test failure over two years ago, yet
left behind. Since the test failure has been addressed since then, this
commit removes the trace logging.
2019-06-18 22:24:36 -04:00
Igor Motov 9f7d1ff2de Geo: Add coerce support to libs/geo WKT parser (#43273)
Adds support for coercing not closed polygons and ignoring Z value
to libs/geo WKT parser.

Closes #43173
2019-06-18 14:41:01 -04:00
Mayya Sharipova aa6248d4d7
Move dense_vector and sparse_vector to module (#43280) (#43333) 2019-06-18 11:56:04 -04:00
Alpar Torok 5a9c48369b TestClusters: Convert the security plugin (#43242)
* TestClusters: Convert the security plugin

This PR moves security tests to use TestClusters.
The TLS test required support in testclusters itself, so the correct
wait condition is configgured based on the cluster settings.

* PR review
2019-06-18 11:55:44 +03:00
Alpar Torok 94930d0e84 Testclusters: convert ml qa tests (#43229)
* Testclusters: convert ml qa tests

This PR converts the ML tests to use testclusters.
2019-06-18 11:55:11 +03:00
David Roberts da97325790 [ML] Speed up persistent task rechecks in ML failover tests (#43291)
The ML failover tests sometimes need to wait for jobs to be
assigned to new nodes following a node failure.  They wait
10 seconds for this to happen.  However, if the node that
failed was the master node and a new master was elected then
this 10 seconds might not be long enough as a refresh of the
memory stats will delay job assignment.  Once the memory
refresh completes the persistent task will be assigned when
the next cluster state update occurs or after the periodic
recheck interval, which defaults to 30 seconds.  Rather than
increase the length of the wait for assignment to 31 seconds,
this change decreases the periodic recheck interval to 1
second.

Fixes #43289
2019-06-18 09:19:20 +01:00
Nhat Nguyen 0c5086d2f3 Rebuild version map when opening internal engine (#43202)
With this change, we will rebuild the live version map and local
checkpoint using documents (including soft-deleted) from the safe commit
when opening an internal engine. This allows us to safely prune away _id
of all soft-deleted documents as the version map is always in-sync with
the Lucene index.

Relates #40741
Supersedes #42979
2019-06-17 18:08:09 -04:00
Benjamin Trent 365f87c622
[ML][Data Frame] only complete task after state persistence (#43230) (#43294)
* [ML][Data Frame] only complete task after state persistence

There is a race condition where the task could be completed, but there
is still a pending document write. This change moves
the task cancellation into the actionlistener of the state persistence.

intermediate commit

intermediate commit

* removing unused import

* removing unused const

* refreshing internal index after waiting for task to complete

* adjusting test data generation
2019-06-17 16:49:00 -05:00
Martijn Laarman 8b1b9f8ab9
Introduce stability description to the REST API specification (#38413) (#43278)
* introduce state to the REST API specification

* change state over to stability

* CCR is no GA updated to stable

* SQL is now GA so marked as stable

* Introduce `internal` as state for API's, marks stable in terms of lifetime but unstable in terms of guarantees on its output format since it exposes internal representations

* make setting a wrong stability value, or not setting it at all an error that causes the YAML test suite to fail

* update spec files to be explicit about their stability state

* Document the fact that stability needs to be defined

Otherwise the YAML test runner will fail (with a nice exception message)

* address check style violations

* update rest spec unit tests to include stability

* found one more test spec file not declaring stability, made sure stability appears after documentation everywhere

* cluster.state is stable, mark response in some way to denote its a key value format that can be changed during minors

* mark data frame API's as beta

* remove internal and private as states for an API

* removed the wrong enum values in the Stability Enum in the previous commit

(cherry picked from commit 61c34bbd92f8f7e5f22fa411c6b682b0ebd8a99d)
2019-06-17 16:57:13 +02:00
Lee Hinman 21da84edbc Make ILM force merging best effort (#43246)
It's possible for force merges kicked off by ILM to silently stop (due
to a node relocating for example). In which case, the segment count may
not reach what the user configured. In the subsequent `SegmentCountStep`
waiting for the expected segment count may wait indefinitely. Because of
this, this commit makes force merges "best effort" and then changes the
`SegmentCountStep` to simply report (at INFO level) if the merge was not
successful.

Relates to #42824
Resolves #43245
2019-06-17 08:45:22 -06:00
David Roberts 3effe264da [ML] Fix problem with lost shards in distributed failure test (#43153)
We were stopping a node in the cluster at a time when
the replica shards of the .ml-state index might not
have been created.  This change moves the wait for
green status to a point where the .ml-state index
exists.

Fixes #40546
Fixes #41742

Forward port of #43111
2019-06-17 09:28:56 +01:00
Przemysław Witek b2613a123d
[7.x] Report exponential_avg_bucket_processing_time which gives more weight to recent buckets (#43189) (#43263) 2019-06-17 08:58:26 +02:00
David Roberts 3928c624a3 [ML] Close sample stream in post_data endpoint (#43235)
A static code analysis revealed that we are not closing
the input stream in the post_data endpoint.  This
actually makes no difference in practice, as the
particular InputStream implementation in this case is
org.elasticsearch.common.bytes.BytesReferenceStreamInput
and its close() method is a no-op. However, it is good
practice to close the stream anyway.
2019-06-14 17:54:54 +01:00
Benjamin Trent 8c66149e2d
[ML][Data Frame] have sum map to a double to prevent overflows (#43213) (#43219) 2019-06-14 10:43:36 -05:00
Marios Trivyzas 9cd89c3453 SQL: Increase hard limit for sorting on aggregates (#43220)
To be consistent with the `search.max_buckets` default setting,
set the hard limit of the PriorityQueue used for in memory sorting,
when sorting on an aggregate function, to 10000.

Fixes: #43168

(cherry picked from commit 079e012fdea68ea0a7daae078359495047e9c407)
2019-06-14 13:51:38 +02:00
Alpar Torok cce5b0f018 Convert dataframes to use testclusters (#43032) 2019-06-14 11:02:39 +03:00
Przemysław Witek 65a584b6fb
[7.x] Report timing stats as part of the Job stats response (#42709) (#43193) 2019-06-14 09:03:14 +02:00
Marios Trivyzas 3c73602524 SQL: Fix wrong results when sorting on aggregate (#43154)
- Previously, when shorting on an aggregate function the bucket
processing ended early when the explicit (LIMIT XXX) or the impliciti
limit of 512 was reached. As a consequence, only a set of grouping
buckets was processed and the results returned didn't reflect the global
ordering.

- Previously, the priority queue shorting method had an inverse
comparison check and the final response from the priority queue was also
returned in the inversed order because of the calls to the `pop()`
method.

Fixes: #42851

(cherry picked from commit 19909edcfdf5792b38c1363b07379783ebd0e6c4)
2019-06-13 21:59:20 +02:00
Jason Tedor 5bc3b7f741
Enable node roles to be pluggable (#43175)
This commit introduces the possibility for a plugin to introduce
additional node roles.
2019-06-13 15:15:48 -04:00
Ryan Ernst c3ce3f6891 Add native code info to ML info api (#43172)
The machine learning feature of xpack has native binaries with a
different commit id than the rest of code. It is currently exposed in
the xpack info api. This commit adds that commit information to the ML
info api, so that it may be removed from the info api.
2019-06-13 11:38:58 -07:00
Alpar Torok 4ba94a5051 Testclusters: convert ccr tests (#42313) 2019-06-13 19:19:36 +03:00
David Roberts 43665183c2 [ML] Restrict detection of epoch timestamps in find_file_structure (#43188)
Previously 10 digit numbers were considered candidates to be
timestamps recorded as seconds since the epoch and 13 digit
numbers as timestamps recorded as milliseconds since the epoch.

However, this meant that we could detect these formats for
numbers that would represent times far in the future.  As an
example ISBN numbers starting with 9 were detected as milliseconds
since the epoch since they had 13 digits.

This change tweaks the logic for detecting such timestamps to
require that they begin with 1 or 2.  This means that numbers
that would represent times beyond about 2065 are no longer
detected as epoch timestamps.  (We can add 3 to the definition
as we get closer to the cutoff date.)
2019-06-13 13:15:41 +01:00
Alpar Torok 167e51335d Convert ILM tests to use testclusters (#43076)
Also improove the error message when bin scripts are not found
2019-06-13 12:24:48 +03:00
Alpar Torok eb7a8bb4a4 Testclusters: graph (#43033)
Convert x-pack  graph to use testClusters
2019-06-13 09:50:59 +03:00
Simon Willnauer f70141c862 Only load FST off heap if we are actually using mmaps for the term dictionary (#43158)
Given the significant performance impact that NIOFS has when term dicts are
loaded off-heap this change enforces FstLoadMode#AUTO that loads term dicts
off heap only if the underlying index input indicates a memory map.

Relates to #43150
2019-06-13 07:54:02 +02:00
Benjamin Trent ec50d4d281
[ML][Data Frame] write a warning audit on bulk index failures (#43106) (#43171)
* [ML][Data Frame] write a warning audit on bulk index failures

* adding failure message and moving to use volalitile
2019-06-12 14:50:17 -05:00
Benjamin Trent aff4795441
[ML][Data Frame] cleaning up tests since tasks are cancelled onfinish (#43136) (#43166)
* [ML][Data Frame] cleaning up usage test since tasks are cancelled onfinish

* Update DataFrameUsageIT.java

* Fixing additional test, waiting for task to complete

* removing unused import

* unmuting test
2019-06-12 14:39:38 -05:00
Benjamin Trent b110164bf4
[ML][Data Frame] add the src priv check for view_index_metadata (#43118) (#43161) 2019-06-12 13:22:46 -05:00
Benjamin Trent f13f55ede3
[ML][Data Frame] change failure count reset logic (#43064) (#43159) 2019-06-12 13:22:34 -05:00
David Kyle 597ae5c7b8 [ML DataFrame] Reject Data Frame Ids containing upper case characters (#43145) 2019-06-12 18:13:18 +01:00
Yannick Welsch 110f0c5b7e Mute testDataFrameTransformCrud
Relates to #43139
2019-06-12 14:12:01 +02:00
Dimitris Athanasiou b28e006f7c
[ML] Lock down extraction method when possible (#43104) (#43140) 2019-06-12 14:07:17 +03:00
Luca Cavanna afeda1a7b9 Split search in two when made against throttled and non throttled searches (#42510)
When a search on some indices takes a long time, it may cause problems to other indices that are being searched as part of the same search request and being written to as well, because their search context needs to stay open for a long time. This is especially a problem when searching against throttled and non-throttled indices as part of the same request. The problem can be generalized though: this may happen whenever read-only indices are searched together with indices that are being written to. Search contexts staying open for a long time is only an issue for indices that are being written to, in practice.

This commit splits the search in two sub-searches: one for read-only indices, and one for ordinary indices. This way the two don't interfere with each other. The split is done only when size is greater than 0, no scroll is provided and query_then_fetch is used as search type. Otherwise, the search executes like before. Note that the returned num_reduce_phases reflect the number of reduction phases that were run. If the search is split in two, there are three reductions: one non-final for each search, and a final one that merges the results of the previous two.

Closes #40900
2019-06-12 11:25:03 +02:00
Nhat Nguyen 5692be2161 Fix timing issue in CcrRetentionLeaseIT (#43054)
In these tests, we sleep for a small multiple of the renew interval,
then check that the retention leases are not changed. If a renewal
request takes longer than that interval because of GC or slow CI, then
the retention leases are not the same as before sleep. With this change,
we relax to assert that we eventually stop the renewable process.

Closes #39509
2019-06-11 18:03:16 -04:00
Benjamin Trent 7ff3d86cf0
[ML][Data Frame] adding dest.index and id validations (#43053) (#43109)
* [ML][Data Frame] adding dest.index and id validations

* adjusting message format

* Adjusting id validity pattern

* Update DataFrameStrings.java
2019-06-11 15:55:18 -05:00
Benjamin Trent e384bf0276
[ML-DataFrame] stop task at completion of data frame function (#42955) (#43114)
* stop data frame task after it finishes

* test auto stop

* adapt tests

* persist the state correctly and move stop into listener

* Calling `onStop` even if persistence fails, changing `stop` to rely on doSaveState
2019-06-11 15:55:02 -05:00