Commit Graph

487 Commits

Author SHA1 Message Date
Dimitris Athanasiou 36884a3c32
[7.x][ML] Restore analytics state if available (#47128) (#47393)
This commit restores the model state if available in data
frame analytics jobs.

In addition, this changes the start API so that a stopped job
can be restarted. As we now store the progress in the state index
when the task is stopped, we can use it to determine what state
the job was in when it got stopped.

Note that in order to be able to distinguish between a job
that runs for the first time and another that is restarting,
we ensure reindexing progress is reported to be at least 1
for a running task.
2019-10-02 10:24:05 +03:00
Benjamin Trent f5fe5e7cd6
[7.x] [ML][Inference] Adding preprocessors to definition object (#47320) (#47370)
* [ML][Inference] Adding preprocessors to definition object (#47320)

* [ML][Inference] Adding preprocessors to definition object

* Update TrainedModelConfig.java

* adjusting for backport
2019-10-01 13:31:25 -04:00
Benjamin Trent 4335e07716
[7.x] [ML][Inference] adding .ml-inference* index and storage (#47267) (#47310)
* [ML][Inference] adding .ml-inference* index and storage (#47267)

* [ML][Inference] adding .ml-inference* index and storage

* Addressing PR comments

* Allowing null definition, adding validation tests for model config

* fixing line length

* adjusting for backport
2019-10-01 08:20:33 -04:00
David Roberts 0807d409bf [ML] Reinstate ML daily maintenance actions (#47103)
A refactoring in 6.6 meant that the ML daily
maintenance actions have not been run at all
since then. This change installs the local
master listener that schedules the ML daily
maintenance, and also defends against some
subtle race conditions that could occur in the
future if a node flipped very quickly between
master and non-master.

Fixes #47003
2019-09-30 13:12:32 +01:00
Rory Hunter 53a4d2176f
Convert most awaitBusy calls to assertBusy (#45794) (#47112)
Backport of #45794 to 7.x. Convert most `awaitBusy` calls to
`assertBusy`, and use asserts where possible. Follows on from #28548 by
@liketic.

There were a small number of places where it didn't make sense to me to
call `assertBusy`, so I kept the existing calls but renamed the method to
`waitUntil`. This was partly to better reflect its usage, and partly so
that anyone trying to add a new call to awaitBusy wouldn't be able to find
it.

I also didn't change the usage in `TransportStopRollupAction` as the
comments state that the local awaitBusy method is a temporary
copy-and-paste.

Other changes:

  * Rework `waitForDocs` to scale its timeout. Instead of calling
    `assertBusy` in a loop, work out a reasonable overall timeout and await
    just once.
  * Some tests failed after switching to `assertBusy` and had to be fixed.
  * Correct the expect templates in AbstractUpgradeTestCase.  The ES
    Security team confirmed that they don't use templates any more, so
    remove this from the expected templates. Also rewrite how the setup
    code checks for templates, in order to give more information.
  * Remove an expected ML template from XPackRestTestConstants The ML team
    advised that the ML tests shouldn't be waiting for any
    `.ml-notifications*` templates, since such checks should happen in the
    production code instead.
  * Also rework the template checking code in `XPackRestTestHelper` to give
    more helpful failure messages.
  * Fix issue in `DataFrameSurvivesUpgradeIT` when upgrading from < 7.4
2019-09-29 12:21:46 +01:00
Przemysław Witek 3fbd58d156
[7.x] Allow evaluation to consist of multiple steps. (#46653) (#47194) 2019-09-27 13:01:51 +02:00
David Roberts 77cc6d5bad [TEST] Work around _cat/indices bug with security enabled (#47160)
When the ML native multi-node tests use _cat/indices/_all
and the request goes to a non-master node, _all is
translated to a list of concrete indices by the authz layer
on the coordinating node before the request is forwarded
to the master node. Then it is possible for the master
node to return an index_not_found_exception if one of
the concrete indices that was expanded on the
coordinating node has been deleted in the meantime.
(#47159 has been opened to track the underlying problem.)

It has been observed that the index that gets deleted when
the problem affects the ML native multi-node tests is
always the ML notifications index. The tests that fail are
only interested in the presence or absense of ML results
indices. Therefore the workaround is to only _cat indices
that match the ML results index pattern.

Fixes #45652
2019-09-26 13:29:40 +01:00
Dimitris Athanasiou 0765bd4bf7
[7.x][ML] Ensure data frame analytics task is only marked completed once (#47119) (#47157)
Closes #46907
2019-09-26 15:26:06 +03:00
Tanguy Leroux 95e2ca741e
Remove unused private methods and fields (#47154)
This commit removes a bunch of unused private fields and unused
private methods from the code base.

Backport of (#47115)
2019-09-26 12:49:21 +02:00
Benjamin Trent 05fb7be571
[7.x] [ML][Inference] Feature pre-processing objects and functions (#46777) (#47040)
* [ML][Inference] Feature pre-processing objects and functions (#46777)

To support inference on pre-trained machine learning models, some basic feature encoding will be necessary. I am using a named object serialization approach so new encodings/pre-processing steps could be added in the future. 

This PR lays down the ground work for 3 basic encodings:

* HotOne
* Target Mean
* Frequency

More feature encodings or pre-processings could be added in the future:

* Handling missing columns
* Standardization
* Label encoding
* etc....

* fixing compilation for namedxcontent tests
2019-09-25 08:16:24 -04:00
Yannick Welsch eb86d71edd Mute MlJobIT.testDeleteJob
Relates #45652
2019-09-25 12:53:09 +02:00
Yannick Welsch 7a5b5af171 Mute MlJobIT.testDeleteJobAsync
Relates #45652
2019-09-25 12:53:05 +02:00
Benjamin Trent 00c1c0132b
[ML] fix two datafeed flush lockup bugs (#46982) (#47024)
* [ML] fix two flush lockup bugs

* Addressing PR comments

* moving debug logging line so it is only written on success
2019-09-24 13:03:20 -04:00
Yannick Welsch 9638ca20b0 Allow dropping documents with auto-generated ID (#46773)
When using auto-generated IDs + the ingest drop processor (which looks to be used by filebeat
as well) + coordinating nodes that do not have the ingest processor functionality, this can lead
to a NullPointerException.

The issue is that markCurrentItemAsDropped() is creating an UpdateResponse with no id when
the request contains auto-generated IDs. The response serialization is lenient for our
REST/XContent format (i.e. we will send "id" : null) but the internal transport format (used for
communication between nodes) assumes for this field to be non-null, which means that it can't
be serialized between nodes. Bulk requests with ingest functionality are processed on the
coordinating node if the node has the ingest capability, and only otherwise sent to a different
node. This means that, in order to reproduce this, one needs two nodes, with the coordinating
node not having the ingest functionality.

Closes #46678
2019-09-19 16:46:33 +02:00
Dimitris Athanasiou 02a5e153dc
[7.x][ML] Parse and index data frame analytics state (#46804) (#46820)
This commit reuses the same state processor that is used for autodetect
to parse state output from data frame analytics jobs. We then index the
state document into the state index.

Backport of #46804
2019-09-18 20:37:40 +03:00
Dimitris Athanasiou cebe8da617
[7.x][ML] MlMemoryTracker should ignore analytics tasks without config (#46789) (#46811)
It is possible for a running analytics job that its config is removed
from the '.ml-config' index (perhaps the user deleted the entire index,
etc.). In that case the task remains without a matching config. I have
raised #46781 to discuss how to deal with this issue.

This commit focuses on `MlMemoryTracker` and changes it so that when
we get the configs for the running tasks we leniently ignore missing ones.
This at least means memory tracking will keep working for other jobs
if one or more are missing.

In addition, this commit makes the cleanup code for native analytics
tests more robust by explicitly stopping all jobs and force-stopping
if an error occurs. This helps so that a single failing test does
not cause other tests fail due to pending tasks.

Backport of #46789
2019-09-18 16:35:25 +03:00
Przemysław Witek e49be611ad
[7.x] Add audit messages for Data Frame Analytics (#46521) (#46738) 2019-09-16 21:21:38 +02:00
Dimitris Athanasiou 63eb0d9081
[7.x][ML] Avoid marking data frame analytics task completed twice (#46721) (#46724)
When the stop API is called while the task is running there is
a chance the task gets marked completed twice. This may cause
undesired side effects, like indexing the progress document a second
time after the stop API has returned (the cause for #46705).

This commit adds a check that the task has not been completed before
proceeding to mark it so. In addition, when we update the task's state
we could get some warnings that the task was missing if the stop API
has been called in the meantime. We now check the errors are
`ResourceNotFoundException` and ignore them if so.

Closes #46705

Backports #46721
2019-09-15 17:25:26 +03:00
Dimitris Athanasiou 0bc8acaf5b
[7.x][ML] Create state index and alias before starting an analytics job (#46602) (#46648)
This is fixing a bug where if an analytics job is started before any
anomaly detection job is opened, we create an index after the state
write alias.

Instead, we should create the state index and alias before starting
an analytics job and this commit makes sure this is the case.

Backport of #46602
2019-09-13 10:34:12 +03:00
David Roberts 461de5b58e [TEST] Remove incorrect data frame analytics state assertion (#46597)
After starting the analytics job and checking its state
the state can be any of "started", "reindexing" or
"analyzing" depending on how quickly the work is done.
2019-09-11 16:33:14 +01:00
Dimitris Athanasiou 579af626f5
[7.x][ML] No error when datafeed stops during updating to started (#46495) (#46542)
Investigating the test failure reported in #45518 it appears that
the datafeed task was not found during a tast state update. There
are only two places where such an update is performed: when we set
the state to `started` and when we set it to `stopping`. We handle
`ResourceNotFoundException` in the latter but not in the former.

Thus the test reveals a rare race condition where the datafeed gets
requested to stop before we managed to update its state to `started`.
I could not reproduce this scenario but it would be my best guess.

This commit catches `ResourceNotFoundException` while updating the
state to `started` and lets the task terminate smoothly.

Closes #45518

Backport of #46495
2019-09-11 13:18:42 +03:00
Przemysław Witek e38e631dac
[7.x] Implement DataFrameAnalyticsAuditMessage and DataFrameAnalyticsAuditor (#45967) (#46519) 2019-09-11 12:17:26 +02:00
Przemysław Witek e21deae535
Disallow persisting any documents when datafeed is isolated (#46485) (#46490) 2019-09-09 21:01:27 +02:00
David Roberts 7c7fb7e32d [ML] Tolerate total_search_time_ms not mapped in get datafeed stats (#46432)
ML users who upgrade from versions prior to 7.4 to 7.4 or later
will have ML results indices that do not have mappings for the
total_search_time_ms field.  Therefore, when searching these
indices we must tolerate this field not having a mapping.

Fixes #46437
2019-09-06 14:31:15 +01:00
Dimitris Athanasiou a6834068e3
[7.x][ML] Extract DataFrameAnalyticsTask into its own class (#46402) (#46426)
This refactors `DataFrameAnalyticsTask` into its own class.
The task has quite a lot of functionality now and I believe it would
make code more readable to have it live as its own class rather than
an inner class of the start action class.

Backport of #46402
2019-09-06 14:13:46 +03:00
Benjamin Trent 457ff3e2fb
7.x/ml fix instance serialization bwc (#46404)
* [ML] Fixing instance serialization version for bwc

* fixing CppLogMessage
2019-09-05 13:23:26 -05:00
Benjamin Trent 5201386232
[ML] testFullClusterRestart waiting for stable cluster (#46280) (#46335)
* [ML] waiting for ml indices before waiting task assignment testFullClusterRestart

* waiting for a stable cluster after fullrestart

* removing unused imports
2019-09-05 06:57:33 -05:00
Dimitris Athanasiou 8fca5b5204
[7.x][ML] Unmute testStopOutlierDetectionWithEnoughDocumentsToScroll (#46271) (#46282)
The test seems to have been failing due to a race condition between
stopping the task and refreshing the destination index. In particular,
we were going forward with refreshing the destination index even
though the task stopped in the meantime. This was fixed in
request.

Closes #43960

Backport of #46271
2019-09-04 10:57:01 +03:00
Benjamin Trent d0c5573a51
[ML] Throw an error when a datafeed needs CCS but it is not enabled for the node (#46044) (#46096)
Though we allow CCS within datafeeds, users could prevent nodes from accessing remote clusters. This can cause mysterious errors and difficult to troubleshoot.

This commit adds a check to verify that `cluster.remote.connect` is enabled on the current node when a datafeed is configured with a remote index pattern.
2019-08-30 09:27:07 -05:00
Dimitris Athanasiou 5921ae53d8
[7.x][ML] Regression dependent variable must be numeric (#46072) (#46136)
* [ML] Regression dependent variable must be numeric

This adds a validation that the dependent variable of a regression
analysis must be numeric.

* Address review comments and fix some problems

In addition to addressing the review comments, this
commit fixes a few issues I found during testing.

In particular:

- if there were mappings for required fields but they were
not included we were not reporting the error
- if explicitly included fields had unsupported types we were
not reporting the error

Unfortunately, I couldn't get those fixed without refactoring
the code in `ExtractedFieldsDetector`.
2019-08-30 09:57:43 +03:00
Przemysław Witek b8a0379057
Refactor auditor-related classes (#45893) (#46120) 2019-08-29 14:21:03 +02:00
Przemysław Witek fbe9e8a530
Do not throw an exception if the process finished quickly but without any error. (#46073) (#46113) 2019-08-29 10:47:17 +02:00
Dimitris Athanasiou 25d64508f6
[7.x][ML] Support boolean fields for DF analytics (#46037) (#46054)
This commit adds support for `boolean` fields in data frame
analytics (and currently both outlier detection and regression).
The analytics process expects `boolean` fields to be encoded as
integers with 0 or 1 value.
2019-08-28 12:02:29 +03:00
Dimitris Athanasiou 873ad3f942
[7.x][ML] Add option to regression to randomize training set (#45969) (#46017)
Adds a parameter `training_percent` to regression. The default
value is `100`. When the parameter is set to a value less than `100`,
from the rows that can be used for training (ie. those that have a
value for the dependent variable) we randomly choose whether to actually
use for training. This enables splitting the data into a training set and
the rest, usually called testing, validation or holdout set, which allows
for validating the model on data that have not been used for training.

Technically, the analytics process considers as training the data that
have a value for the dependent variable. Thus, when we decide a training
row is not going to be used for training, we simply clear the row's
dependent variable.
2019-08-27 17:53:11 +03:00
Benjamin Trent a3a4ae0ac2
[ML] fixing bug where analytics process starts with 0 rows (#45879) (#45988)
The native process requires that there be a non-zero number of rows to analyze. If the flag --rows 0 is passed to the executable, it throws and does not start.

When building the configuration for the process we should not start the native process if there are no rows.

Adding some logging to indicate what is occurring.
2019-08-26 14:18:17 -05:00
Benjamin Trent d64018f8e1
[ML] add supported types to no fields error message (#45926) (#45987)
* [ML] add supported types to no fields error message

* adding supported types to logger debug
2019-08-26 14:18:00 -05:00
Dimitris Athanasiou be554fe5f0
[7.x][ML] Improve progress reportings for DF analytics (#45856) (#45910)
Previously, the stats API reports a progress percentage
for DF analytics tasks that are running and are in the
`reindexing` or `analyzing` state.

This means that when the task is `stopped` there is no progress
reported. Thus, one cannot distinguish between a task that never
run to one that completed.

In addition, there are blind spots in the progress reporting.
In particular, we do not account for when data is loaded into the
process. We also do not account for when results are written.

This commit addresses the above issues. It changes progress
to being a list of objects, each one describing the phase
and its progress as a percentage. We currently have 4 phases:
reindexing, loading_data, analyzing, writing_results.

When the task stops, progress is persisted as a document in the
state index. The stats API now reports progress from in-memory
if the task is running, or returns the persisted document
(if there is one).
2019-08-23 23:04:39 +03:00
Przemysław Witek 85d55e30d0
Add test that proves _timing_stats document is deleted when the job is deleted (#45840) (#45854) 2019-08-23 07:03:09 +02:00
Przemysław Witek 2ed19b2c81
Put error message from inside the process into the exception that is thrown when the process doesn't start correctly. (#45846) (#45875) 2019-08-23 07:02:50 +02:00
Benjamin Trent 8e3c54fff7
[7.x] [ML] Adding data frame analytics stats to _usage API (#45820) (#45872)
* [ML] Adding data frame analytics stats to _usage API (#45820)

* [ML] Adding data frame analytics stats to _usage API

* making the size of analytics stats 10k

* adjusting backport
2019-08-22 15:15:41 -05:00
Przemysław Witek 7512337922
[7.x] Allow the user to specify 'query' in Evaluate Data Frame request (#45775) (#45825) 2019-08-22 11:14:26 +02:00
Przemysław Witek bf701b83d2
Shorten field names in EstimateMemoryUsageResponse (#45719) (#45772) 2019-08-21 12:45:09 +02:00
Przemysław Witek c6709f0979
Mute tests affected by renaming fields in Estimate memory usage response (#45743) (#45766) 2019-08-21 09:57:23 +02:00
Dimitris Athanasiou d5c3d9b50f
[7.x][ML] Do not skip rows with missing values for regression (#45751) (#45754)
Regression analysis support missing fields. Even more, it is expected
that the dependent variable has missing fields to the part of the
data frame that is not for training.

This commit allows to declare that an analysis supports missing values.
For such analysis, rows with missing values are not skipped. Instead,
they are written as normal with empty strings used for the missing values.

This also contains a fix to the integration test.

Closes #45425
2019-08-21 08:15:38 +03:00
Benjamin Trent ba7b677618
[ML] better handle empty results when evaluating regression (#45745) (#45759)
* [ML] better handle empty results when evaluating regression

* adding new failure test to ml_security black list

* fixing equality check for regression results
2019-08-20 17:37:04 -05:00
Dimitris Athanasiou 49edf9e5b5
[7.x][ML] Remove timeout on waiting for DF analytics result processor to complete (#45724) (#45733)
We cannot know how long the analysis will take to complete thus we should not have
a timeout. Note that if the process crashes, the result processor will pick the
exception due to the stream closing.

Closes #45723
2019-08-20 17:21:40 +03:00
Przemysław Witek b37ebd1adf
Prepare the codebase for new Auditor subclasses (#45716) (#45731) 2019-08-20 16:03:50 +02:00
Przemysław Witek 80dd0a0948
Get rid of EstimateMemoryUsageRequest and EstimateMemoryUsageAction.Request. (#45718) (#45725) 2019-08-20 15:49:17 +02:00
Przemysław Witek 7bc8400222
Call the new _estimate_memory_usage API endpoint on df analytics _start (#45536) (#45701) 2019-08-19 21:37:55 +02:00
Igor Motov 98c850c08b
Geo: Change order of parameter in Geometries to lon, lat 7.x (#45618)
Changes the order of parameters in Geometries from lat, lon to lon, lat
and moves all Geometry classes are moved to the
org.elasticsearch.geomtery package.

Backport of #45332

Closes #45048
2019-08-16 14:42:02 -04:00