Commit Graph

684 Commits

Author SHA1 Message Date
Mayya Sharipova f96ad5c32d Mute testSingleNumericFeatureAndMixedTrainingAndNonTrainingRows 2020-03-06 12:48:05 -05:00
Mark Vieira 09a3f45880
Mute ClassificationIT.testTwoJobsWithSameRandomizeSeedUseSameTrainingSet
Signed-off-by: Mark Vieira <portugee@gmail.com>
2020-03-06 07:38:04 -08:00
James Baiera 01f00df5cd
Mute RegressionIT.testTwoJobsWithSameRandomizeSeedUseSameTrainingSet 2020-03-06 07:37:57 -08:00
Dimitris Athanasiou 9abf537527
[7.x][ML] Improve DF analytics audits and logging (#53179) (#53218)
Adds audits for when the job starts reindexing, loading data,
analyzing, writing results. Also adds some info logging.

Backport of #53179
2020-03-06 13:47:27 +02:00
Benjamin Trent af0b1c2860
[ML] Fix minor race condition in dataframe analytics _stop (#53029) (#53164)
Tests have been periodically failing due to a race condition on checking a recently `STOPPED` task's state. The `.ml-state` index is not created until the task has already been transitioned to `STARTED`. This allows the `_start` API call to return. But, if a user (or test) immediately attempts to `_stop` that job, the job could stop and the task removed BEFORE the `.ml-state|stats` indices are created/updated.

This change moves towards the task cleaning up itself in its main execution thread. `stop` flips the flag of the task to `isStopping` and now we check `isStopping` at every necessary method. Allowing the task to gracefully stop.

closes #53007
2020-03-05 09:59:18 -05:00
Benjamin Trent 181ee3ae0b
[ML] specifying missing_field_value value and using it instead of empty_string (#53108) (#53165)
For analytics, we need a consistent way of indicating when a value is missing. Inheriting from anomaly detection, analysis sent `""` when a field is missing. This works fine with numbers, but the underlying analytics process actually treats `""` as a category in categorical values. 

Consequently, you end up with this situation in the resulting model
```
{
              "frequency_encoding" : {
                "field" : "RainToday",
                "feature_name" : "RainToday_frequency",
                "frequency_map" : {
                  "" : 0.009844409027270245,
                  "No" : 0.6472019970785184,
                  "Yes" : 0.6472019970785184
                }
              }
            }
```
For inference this is a problem, because inference will treat missing values as `null`. And thus not include them on the infer call against the model.

This PR takes advantage of our new `missing_field_value` option and supplies `\0` as the value.
2020-03-05 09:50:52 -05:00
David Roberts 01504df876 [TEST] Force close failed job before skipping test (#53128)
The assumption added in #52631 skips a problematic test
if it fails to create the required conditions for the
scenario it is supposed to be testing.  (This happens
very rarely.)

However, before skipping the test it needs to remove the
failed job it has created because the standard test
cleanup code treats failed jobs as fatal errors.

Closes #52608
2020-03-05 10:52:41 +00:00
Jay Modi c610e0893d
Introduce system index APIs for Kibana (#53035)
This commit introduces a module for Kibana that exposes REST APIs that
will be used by Kibana for access to its system indices. These APIs are wrapped
versions of the existing REST endpoints. A new setting is also introduced since
the Kibana system indices' names are allowed to be changed by a user in case
multiple instances of Kibana use the same instance of Elasticsearch.

Additionally, the ThreadContext has been extended to indicate that the use of
system indices may be allowed in a request. This will be built upon in the future
for the protection of system indices.

Backport of #52385
2020-03-03 14:11:36 -07:00
Yang Wang 70814daa86
Allow _rollup_search with read privilege (#52043) (#53047)
Currently _rollup_search requires manage privilege to access. It should really be
a read only operation. This PR changes the requirement to be read indices privilege.

Resolves: #50245
2020-03-03 22:29:54 +11:00
Mark Vieira f8396e8d15
Mute RunDataFrameAnalyticsIT.testStopOutlierDetectionWithEnoughDocumentsToScroll
Signed-off-by: Mark Vieira <portugee@gmail.com>
2020-03-02 09:21:55 -08:00
Lisa Cawley 4fbe1b0550
[DOCS] Adds cat anomaly detectors API (#52866) (#52970) 2020-03-02 07:28:55 -08:00
Dimitris Athanasiou 85b4e45093
[7.x]ML] Parse and report memory usage for DF Analytics (#52778) (#52980)
Adds reporting of memory usage for data frame analytics jobs.
This commit introduces a new index pattern `.ml-stats-*` whose
first concrete index will be `.ml-stats-000001`. This index serves
to store instrumentation information for those jobs.

Backport of #52778 and #52958
2020-02-29 13:03:40 +02:00
Benjamin Trent 19a6c5d980
[7.x] [ML][Inference] Add support for multi-value leaves to the tree model (#52531) (#52901)
* [ML][Inference] Add support for multi-value leaves to the tree model (#52531)

This adds support for multi-value leaves. This is a prerequisite for multi-class boosted tree classification.
2020-02-27 14:05:28 -05:00
Benjamin Trent eac38e9847
[ML] Add indices_options to datafeed config and update (#52793) (#52905)
This adds a new configurable field called `indices_options`. This allows users to create or update the indices_options used when a datafeed reads from an index.

This is necessary for the following use cases:
 - Reading from frozen indices
 - Allowing certain indices in multiple index patterns to not exist yet

These index options are available on datafeed creation and update. Users may specify them as URL parameters or within the configuration object.

closes https://github.com/elastic/elasticsearch/issues/48056
2020-02-27 13:43:25 -05:00
David Kyle d8bdf31110 Revert "Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart"
This reverts commit ad3a3b1af9.
2020-02-27 12:38:13 +00:00
David Kyle 6e5e64559a
Unwrap cause from remote ActionTransportExceptions (#52842) (#52878)
And log the cause
2020-02-27 11:58:28 +00:00
Yang Wang 14c21aedd2
Simplify ml license checking with XpackLicenseState internals (#52684) (#52863)
This change removes TrainedModelConfig#isAvailableWithLicense method with calls to
XPackLicenseState#isAllowedByLicense.

Please note there are subtle changes to the code logic. But they are the right changes:
* Instead of Platinum license, Enterprise license nows guarantees availability.
* No explicit check when the license requirement is basic. Since basic license is always available, this check is unnecessary.
* Trial license is always allowed.
2020-02-27 14:14:16 +11:00
Jake Landis b4179a8814
[7.x] Refactor watcher tests (#52799) (#52844)
This PR moves the majority of the Watcher REST tests under
the Watcher x-pack plugin.

Specifically, moves the Watcher tests from:
x-pack/plugin/test
x-pack/qa/smoke-test-watcher
x-pack/qa/smoke-test-watcher-with-security
x-pack/qa/smoke-test-monitoring-with-watcher

to:
x-pack/plugin/watcher/qa/rest (/test and /qa/smoke-test-watcher)
x-pack/plugin/watcher/qa/with-security
x-pack/plugin/watcher/qa/with-monitoring

Additionally, this disables Watcher from the main
x-pack test cluster and consolidates the stop/start logic
for the tests listed.

No changes to the tests (beyond moving them) are included.

3rd party tests and doc tests (which also touch Watcher)
are not included in the changes here.
2020-02-26 15:57:10 -06:00
Lisa Cawley b788ec7157 [DOCS] Adds cat datafeeds API (#52738) 2020-02-26 09:28:57 -08:00
David Kyle ad3a3b1af9 Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart 2020-02-26 14:31:00 +00:00
Jake Landis 8d311297ca
[7.x] Smarter copying of the rest specs and tests (#52114) (#52798)
* Smarter copying of the rest specs and tests (#52114)

This PR addresses the unnecessary copying of the rest specs and allows
for better semantics for which specs and tests are copied. By default
the rest specs will get copied if the project applies
`elasticsearch.standalone-rest-test` or `esplugin` and the project
has rest tests or you configure the custom extension `restResources`.

This PR also removes the need for dozens of places where the x-pack
specs were copied by supporting copying of the x-pack rest specs too.

The plugin/task introduced here can also copy the rest tests to the
local project through a similar configuration.

The new plugin/task allows a user to minimize the surface area of
which rest specs are copied. Per project can be configured to include
only a subset of the specs (or tests). Configuring a project to only
copy the specs when actually needed should help with build cache hit
rates since we can better define what is actually in use.
However, project level optimizations for build cache hit rates are
not included with this PR.

Also, with this PR you can no longer use the includePackaged flag on
integTest task.

The following items are included in this PR:
* new plugin: `elasticsearch.rest-resources`
* new tasks: CopyRestApiTask and CopyRestTestsTask - performs the copy
* new extension 'restResources'
```
restResources {
  restApi {
    includeCore 'foo' , 'bar' //will include the core specs that start with foo and bar
    includeXpack 'baz' //will include x-pack specs that start with baz
  }
  restTests {
    includeCore 'foo', 'bar' //will include the core tests that start with foo and bar
    includeXpack 'baz' //will include the x-pack tests that start with baz
  }
}

```
2020-02-26 08:13:41 -06:00
David Kyle 37be695d5c
[ML] Handle failed datafeed in MlDistributedFailureIT (#52631) (#52789) 2020-02-26 08:18:37 +00:00
David Roberts cf122d13b8 [ML] Use event.timezone in file_structure_finder ingest pipeline (#52720)
This is because beat.timezone was renamed to event.timezone in
elastic/beats#9458
2020-02-25 12:33:53 +00:00
David Kyle de3d674bb7 Revert "Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart"
This reverts commit c4d91143ac.
2020-02-24 15:22:49 +00:00
David Kyle 044a4e127a
[ML] Add reason to DataFrameAnalyticsTask setFailed log message (#52659) (#52707) 2020-02-24 15:21:51 +00:00
Benjamin Trent afd90647c9
[ML] Adds feature importance to option to inference processor (#52218) (#52666)
This adds machine learning model feature importance calculations to the inference processor.

The new flag in the configuration matches the analytics parameter name: `num_top_feature_importance_values`
Example:
```
"inference": {
   "field_mappings": {},
   "model_id": "my_model",
   "inference_config": {
      "regression": {
         "num_top_feature_importance_values": 3
      }
   }
}
```

This will write to the document as follows:
```
"inference" : {
   "feature_importance" : {
      "FlightTimeMin" : -76.90955548511226,
      "FlightDelayType" : 114.13514762158526,
      "DistanceMiles" : 13.731580450792187
   },
   "predicted_value" : 108.33165831875137,
   "model_id" : "my_model"
}
```

This is done through calculating the [SHAP values](https://arxiv.org/abs/1802.03888).

It requires that models have populated `number_samples` for each tree node. This is not available to models that were created before 7.7.

Additionally, if the inference config is requesting feature_importance, and not all nodes have been upgraded yet, it will not allow the pipeline to be created. This is to safe-guard in a mixed-version environment where only some ingest nodes have been upgraded.

NOTE: the algorithm is a Java port of the one laid out in ml-cpp: https://github.com/elastic/ml-cpp/blob/master/lib/maths/CTreeShapFeatureImportance.cc

usability blocked by: https://github.com/elastic/ml-cpp/pull/991
2020-02-21 18:42:31 -05:00
Jack Conradson c4d91143ac Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart
Relates: #52654
2020-02-21 09:32:19 -08:00
Jay Modi f3f6ff97ee
Single instance of the IndexNameExpressionResolver (#52604)
This commit modifies the codebase so that our production code uses a
single instance of the IndexNameExpressionResolver class. This change
is being made in preparation for allowing name expression resolution
to be augmented by a plugin.

In order to remove some instances of IndexNameExpressionResolver, the
single instance is added as a parameter of Plugin#createComponents and
PersistentTaskPlugin#getPersistentTasksExecutor.

Backport of #52596
2020-02-21 07:50:02 -07:00
Przemysław Witek b84e8db7b5
[7.x] Rename .ml-state index to .ml-state-000001 to support rollover (#52510) (#52595) 2020-02-21 08:55:59 +01:00
Yang Wang 4bc7545e43
Add enterprise mode and refactor license check (#51864) (#52115)
Add enterprise operation mode to properly map enterprise license.

Aslo refactor XPackLicenstate class to consolidate license status and mode checks.
This class has many sychronised methods to check basically three things:
* Minimum operation mode required
* Whether security is enabled
* Whether current license needs to be active

Depends on the actual feature, either 1, 2 or all of above checks are performed.
These are now consolidated in to 3 helper methods (2 of them are new).
The synchronization is pushed down to the helper methods so actual checking
methods no longer need to worry about it.

resolves: #51081
2020-02-21 14:18:18 +11:00
Benjamin Trent 2a5c181dda
[ML][Inference] don't return inflated definition when storing trained models (#52573) (#52580)
When `PUT` is called to store a trained model, it is useful to return the newly create model config. But, it is NOT useful to return the inflated definition.

These definitions can be large and returning the inflated definition causes undo work on the server and client side.

Co-authored-by: Elastic Machine <elasticmachine@users.noreply.github.com>
2020-02-20 19:47:29 -05:00
Benjamin Trent 013d5c2d24
[ML] Adds support for a global calendar via `_all` (#50372) (#52578)
This adds `_all` to Calendar searches. This enables users to supply the `_all` string in the `job_ids` array when creating a Calendar. That calendar will now be applied to all jobs (existing and newly created).

Closes #45013

Co-authored-by: Elastic Machine <elasticmachine@users.noreply.github.com>
2020-02-20 17:22:59 -05:00
David Kyle 7bbe5c8464
[Ml] Validate tree feature index is within range (#52514)
This changes the tree validation code to ensure no node in the tree has a
feature index that is beyond the bounds of the feature_names array.
Specifically this handles the situation where the C++ emits a tree containing
a single node and an empty feature_names list. This is valid tree used to
centre the data in the ensemble but the validation code would reject this
as feature_names is empty. This meant a broken workflow as you cannot GET
the model and PUT it back
2020-02-19 14:41:43 +00:00
Przemysław Witek 7cd997df84
[ML] Make ml internal indices hidden (#52423) (#52509) 2020-02-19 14:02:32 +01:00
David Roberts 9c49868bc5 [TEST] Use busy asserts in ML distributed failure test (#52461)
When changing a job state using a mechanism that doesn't
wait for the desired state to be reached within the production
code the test code needs to loop until the cluster state has
been updated.

Closes #52451
2020-02-18 11:17:37 +00:00
David Roberts 48ccf36db9 [ML] Increase assertBusy timeout in ML node failure tests (#52425)
Following the change to store cluster state in Lucene indices
(#50907) it can take longer for all the cluster state updates
associated with node failure scenarios to be processed during
internal cluster tests where several nodes all run in the same
JVM.
2020-02-17 17:04:18 +00:00
Dimitris Athanasiou ad56802ac6
[7.x][ML] Refactor ML mappings and templates into JSON resources (#51… (#52353)
ML mappings and index templates have so far been created
programmatically. While this had its merits due to static typing,
there is consensus it would be clear to maintain those in json files.
In addition, we are going to adding ILM policies to these indices
and the component for a plugin to register ILM policies is
`IndexTemplateRegistry`. It expects the templates to be in resource
json files.

For the above reasons this commit refactors ML mappings and index
templates into json resource files that are registered via
`MlIndexTemplateRegistry`.

Backport of #51765
2020-02-14 17:16:06 +02:00
Przemysław Witek 0da3af7581
[7.x] [ML] Add _cat/ml/data_frame/analytics API (#52260) (#52312) 2020-02-13 16:55:47 +01:00
Jay Modi 5bcc6fce5c
Remove DeprecationLogger from route objects (#52285)
This commit removes the need for DeprecatedRoute and ReplacedRoute to
have an instance of a DeprecationLogger. Instead the RestController now
has a DeprecationLogger that will be used for all deprecated and
replaced route messages.

Relates #51950
Backport of #52278
2020-02-12 15:05:41 -07:00
Benjamin Trent 2a968f4f2b
[ML] job results provider refactoring (#52012) (#52238)
During a bug hunt, I caught a handful of things (unrelated to the bug) that could be potential issues:

1. Needlessly wrapping in exception handling (minor cleanup)
2. Potential of notifying listeners of a failure multiple times + even trying to notify of a success after a failure notification
2020-02-11 17:54:44 -05:00
David Roberts d1d9c40e71 [ML] Switch poor categorization audit warning to use status field (#52195)
In #51146 a rudimentary check for poor categorization was added to
7.6.

This change replaces that warning based on a Java-side check with
a new one based on the categorization_status field that the ML C++
sets.  categorization_status was added in 7.7 and above by #51879,
so this new warning based on more advanced conditions will also be
in 7.7 and above.

Closes #50749
2020-02-11 15:33:27 +00:00
David Roberts 473468d763 [ML] Better error when persistent task assignment disabled (#52014)
Changes the misleading error message when attempting to open
a job while the "cluster.persistent_tasks.allocation.enable"
setting is set to "none" to a clearer message that names the
setting.

Closes #51956
2020-02-11 15:23:21 +00:00
Dimitris Athanasiou 6086fadf00
[7.x][ML] Prepare to hold additional stats in DF Analytics task (#52134) (#52187)
Refactors `DataFrameAnalyticsTask` to hold a `StatsHolder` object.
That just has a `ProgressTracker` for now but this is paving the
way to add additional stats like memory usage, analysis stats, etc.

Backport #52134
2020-02-11 11:18:45 +02:00
Dimitris Athanasiou cbebc26f50
[7.x][ML] Retry persisting DF Analytics results (#52048) (#52160)
Employs `ResultsPersisterService` from `DataFrameRowsJoiner` in order
to add retries when a data frame analytics job is persisting the results
to the destination data frame.

Backport of #52048
2020-02-11 09:55:00 +02:00
Przemysław Witek c7cc383d33
[7.x] Update persistent state document in the index the document belongs to (#51751) (#52145) 2020-02-10 16:32:34 +01:00
David Roberts 1cefafdd14 [ML] Add new categorization stats to model_size_stats (#52009)
This change adds support for the following new model_size_stats
fields:

- categorized_doc_count
- total_category_count
- frequent_category_count
- rare_category_count
- dead_category_count
- categorization_status

Backport of #51879
2020-02-10 09:10:50 +00:00
Jay Modi 3edadfefd0 RestHandlers declare handled routes (#52123)
This commit changes how RestHandlers are registered with the
RestController so that a RestHandler no longer needs to register itself
with the RestController. Instead the RestHandler interface has new
methods which when called provide information about the routes
(method and path combinations) that are handled by the handler
including any deprecated and/or replaced combinations.

This change also makes the publication of RestHandlers safe since they
no longer publish a reference to themselves within their constructors.

Closes #51622

Co-authored-by: Jason Tedor <jason@tedor.me>

Backport of #51950
2020-02-09 22:48:32 -07:00
Benjamin Trent dffcd021df
[7.x] [ML] Add bwc serialization unit test scaffold (#51889) (#52061)
* [ML] Add bwc serialization unit test scaffold (#51889)

Adds new `AbstractBWCSerializationTestCase` which provides easy scaffolding for BWC serialization unit tests.

These are no replacement for true BWC tests (which execute actual old code). These tests do provide some good coverage for the current code when serializing to/from old versions.

* removing unnecessary override for 7.series branch

* adding necessary import

Co-authored-by: Elastic Machine <elasticmachine@users.noreply.github.com>
2020-02-07 17:17:11 -05:00
Benjamin Trent 846f87a26e
[ML] allow close/stop for jobs/datafeeds with missing configs (#51888) (#51997)
If the configs are removed (by some horrific means), we should still allow tasks to be cleaned up easily.

Datafeeds and jobs with missing configs are now visible in their respective _stats calls and can be stopped/closed.
2020-02-06 12:10:18 -05:00
Benjamin Trent 79f143907a
[7.x] [ML] add _cat/ml/trained_models API (#51529) (#51936)
* [ML] add _cat/ml/trained_models API (#51529)

This adds _cat/ml/trained_models.
2020-02-05 08:26:44 -05:00