Commit Graph

235 Commits

Author SHA1 Message Date
Mayya Sharipova f96ad5c32d Mute testSingleNumericFeatureAndMixedTrainingAndNonTrainingRows 2020-03-06 12:48:05 -05:00
Mark Vieira 09a3f45880
Mute ClassificationIT.testTwoJobsWithSameRandomizeSeedUseSameTrainingSet
Signed-off-by: Mark Vieira <portugee@gmail.com>
2020-03-06 07:38:04 -08:00
James Baiera 01f00df5cd
Mute RegressionIT.testTwoJobsWithSameRandomizeSeedUseSameTrainingSet 2020-03-06 07:37:57 -08:00
Dimitris Athanasiou 9abf537527
[7.x][ML] Improve DF analytics audits and logging (#53179) (#53218)
Adds audits for when the job starts reindexing, loading data,
analyzing, writing results. Also adds some info logging.

Backport of #53179
2020-03-06 13:47:27 +02:00
Benjamin Trent af0b1c2860
[ML] Fix minor race condition in dataframe analytics _stop (#53029) (#53164)
Tests have been periodically failing due to a race condition on checking a recently `STOPPED` task's state. The `.ml-state` index is not created until the task has already been transitioned to `STARTED`. This allows the `_start` API call to return. But, if a user (or test) immediately attempts to `_stop` that job, the job could stop and the task removed BEFORE the `.ml-state|stats` indices are created/updated.

This change moves towards the task cleaning up itself in its main execution thread. `stop` flips the flag of the task to `isStopping` and now we check `isStopping` at every necessary method. Allowing the task to gracefully stop.

closes #53007
2020-03-05 09:59:18 -05:00
Yang Wang 70814daa86
Allow _rollup_search with read privilege (#52043) (#53047)
Currently _rollup_search requires manage privilege to access. It should really be
a read only operation. This PR changes the requirement to be read indices privilege.

Resolves: #50245
2020-03-03 22:29:54 +11:00
Mark Vieira f8396e8d15
Mute RunDataFrameAnalyticsIT.testStopOutlierDetectionWithEnoughDocumentsToScroll
Signed-off-by: Mark Vieira <portugee@gmail.com>
2020-03-02 09:21:55 -08:00
Benjamin Trent 19a6c5d980
[7.x] [ML][Inference] Add support for multi-value leaves to the tree model (#52531) (#52901)
* [ML][Inference] Add support for multi-value leaves to the tree model (#52531)

This adds support for multi-value leaves. This is a prerequisite for multi-class boosted tree classification.
2020-02-27 14:05:28 -05:00
Benjamin Trent eac38e9847
[ML] Add indices_options to datafeed config and update (#52793) (#52905)
This adds a new configurable field called `indices_options`. This allows users to create or update the indices_options used when a datafeed reads from an index.

This is necessary for the following use cases:
 - Reading from frozen indices
 - Allowing certain indices in multiple index patterns to not exist yet

These index options are available on datafeed creation and update. Users may specify them as URL parameters or within the configuration object.

closes https://github.com/elastic/elasticsearch/issues/48056
2020-02-27 13:43:25 -05:00
David Kyle d8bdf31110 Revert "Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart"
This reverts commit ad3a3b1af9.
2020-02-27 12:38:13 +00:00
Jake Landis b4179a8814
[7.x] Refactor watcher tests (#52799) (#52844)
This PR moves the majority of the Watcher REST tests under
the Watcher x-pack plugin.

Specifically, moves the Watcher tests from:
x-pack/plugin/test
x-pack/qa/smoke-test-watcher
x-pack/qa/smoke-test-watcher-with-security
x-pack/qa/smoke-test-monitoring-with-watcher

to:
x-pack/plugin/watcher/qa/rest (/test and /qa/smoke-test-watcher)
x-pack/plugin/watcher/qa/with-security
x-pack/plugin/watcher/qa/with-monitoring

Additionally, this disables Watcher from the main
x-pack test cluster and consolidates the stop/start logic
for the tests listed.

No changes to the tests (beyond moving them) are included.

3rd party tests and doc tests (which also touch Watcher)
are not included in the changes here.
2020-02-26 15:57:10 -06:00
David Kyle ad3a3b1af9 Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart 2020-02-26 14:31:00 +00:00
Jake Landis 8d311297ca
[7.x] Smarter copying of the rest specs and tests (#52114) (#52798)
* Smarter copying of the rest specs and tests (#52114)

This PR addresses the unnecessary copying of the rest specs and allows
for better semantics for which specs and tests are copied. By default
the rest specs will get copied if the project applies
`elasticsearch.standalone-rest-test` or `esplugin` and the project
has rest tests or you configure the custom extension `restResources`.

This PR also removes the need for dozens of places where the x-pack
specs were copied by supporting copying of the x-pack rest specs too.

The plugin/task introduced here can also copy the rest tests to the
local project through a similar configuration.

The new plugin/task allows a user to minimize the surface area of
which rest specs are copied. Per project can be configured to include
only a subset of the specs (or tests). Configuring a project to only
copy the specs when actually needed should help with build cache hit
rates since we can better define what is actually in use.
However, project level optimizations for build cache hit rates are
not included with this PR.

Also, with this PR you can no longer use the includePackaged flag on
integTest task.

The following items are included in this PR:
* new plugin: `elasticsearch.rest-resources`
* new tasks: CopyRestApiTask and CopyRestTestsTask - performs the copy
* new extension 'restResources'
```
restResources {
  restApi {
    includeCore 'foo' , 'bar' //will include the core specs that start with foo and bar
    includeXpack 'baz' //will include x-pack specs that start with baz
  }
  restTests {
    includeCore 'foo', 'bar' //will include the core tests that start with foo and bar
    includeXpack 'baz' //will include the x-pack tests that start with baz
  }
}

```
2020-02-26 08:13:41 -06:00
David Kyle de3d674bb7 Revert "Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart"
This reverts commit c4d91143ac.
2020-02-24 15:22:49 +00:00
Benjamin Trent afd90647c9
[ML] Adds feature importance to option to inference processor (#52218) (#52666)
This adds machine learning model feature importance calculations to the inference processor.

The new flag in the configuration matches the analytics parameter name: `num_top_feature_importance_values`
Example:
```
"inference": {
   "field_mappings": {},
   "model_id": "my_model",
   "inference_config": {
      "regression": {
         "num_top_feature_importance_values": 3
      }
   }
}
```

This will write to the document as follows:
```
"inference" : {
   "feature_importance" : {
      "FlightTimeMin" : -76.90955548511226,
      "FlightDelayType" : 114.13514762158526,
      "DistanceMiles" : 13.731580450792187
   },
   "predicted_value" : 108.33165831875137,
   "model_id" : "my_model"
}
```

This is done through calculating the [SHAP values](https://arxiv.org/abs/1802.03888).

It requires that models have populated `number_samples` for each tree node. This is not available to models that were created before 7.7.

Additionally, if the inference config is requesting feature_importance, and not all nodes have been upgraded yet, it will not allow the pipeline to be created. This is to safe-guard in a mixed-version environment where only some ingest nodes have been upgraded.

NOTE: the algorithm is a Java port of the one laid out in ml-cpp: https://github.com/elastic/ml-cpp/blob/master/lib/maths/CTreeShapFeatureImportance.cc

usability blocked by: https://github.com/elastic/ml-cpp/pull/991
2020-02-21 18:42:31 -05:00
Jack Conradson c4d91143ac Mute RunDataFrameAnalyticsIT.testOutlierDetectionStopAndRestart
Relates: #52654
2020-02-21 09:32:19 -08:00
Przemysław Witek b84e8db7b5
[7.x] Rename .ml-state index to .ml-state-000001 to support rollover (#52510) (#52595) 2020-02-21 08:55:59 +01:00
Benjamin Trent 2a5c181dda
[ML][Inference] don't return inflated definition when storing trained models (#52573) (#52580)
When `PUT` is called to store a trained model, it is useful to return the newly create model config. But, it is NOT useful to return the inflated definition.

These definitions can be large and returning the inflated definition causes undo work on the server and client side.

Co-authored-by: Elastic Machine <elasticmachine@users.noreply.github.com>
2020-02-20 19:47:29 -05:00
Benjamin Trent 013d5c2d24
[ML] Adds support for a global calendar via `_all` (#50372) (#52578)
This adds `_all` to Calendar searches. This enables users to supply the `_all` string in the `job_ids` array when creating a Calendar. That calendar will now be applied to all jobs (existing and newly created).

Closes #45013

Co-authored-by: Elastic Machine <elasticmachine@users.noreply.github.com>
2020-02-20 17:22:59 -05:00
David Kyle 7bbe5c8464
[Ml] Validate tree feature index is within range (#52514)
This changes the tree validation code to ensure no node in the tree has a
feature index that is beyond the bounds of the feature_names array.
Specifically this handles the situation where the C++ emits a tree containing
a single node and an empty feature_names list. This is valid tree used to
centre the data in the ensemble but the validation code would reject this
as feature_names is empty. This meant a broken workflow as you cannot GET
the model and PUT it back
2020-02-19 14:41:43 +00:00
Przemysław Witek 7cd997df84
[ML] Make ml internal indices hidden (#52423) (#52509) 2020-02-19 14:02:32 +01:00
Dimitris Athanasiou ad56802ac6
[7.x][ML] Refactor ML mappings and templates into JSON resources (#51… (#52353)
ML mappings and index templates have so far been created
programmatically. While this had its merits due to static typing,
there is consensus it would be clear to maintain those in json files.
In addition, we are going to adding ILM policies to these indices
and the component for a plugin to register ILM policies is
`IndexTemplateRegistry`. It expects the templates to be in resource
json files.

For the above reasons this commit refactors ML mappings and index
templates into json resource files that are registered via
`MlIndexTemplateRegistry`.

Backport of #51765
2020-02-14 17:16:06 +02:00
David Roberts 473468d763 [ML] Better error when persistent task assignment disabled (#52014)
Changes the misleading error message when attempting to open
a job while the "cluster.persistent_tasks.allocation.enable"
setting is set to "none" to a clearer message that names the
setting.

Closes #51956
2020-02-11 15:23:21 +00:00
Benjamin Trent 846f87a26e
[ML] allow close/stop for jobs/datafeeds with missing configs (#51888) (#51997)
If the configs are removed (by some horrific means), we should still allow tasks to be cleaned up easily.

Datafeeds and jobs with missing configs are now visible in their respective _stats calls and can be stopped/closed.
2020-02-06 12:10:18 -05:00
Benjamin Trent 1380dd439a
[7.x] [ML][Inference] Fix weighted mode definition (#51648) (#51695)
* [ML][Inference] Fix weighted mode definition (#51648)

Weighted mode inaccurately assumed that the "max value" of the input values would be the maximum class value. This does not make sense. 

Weighted Mode should know how many classes there are. Hence the new parameter `num_classes`. This indicates what the maximum class value to be expected.
2020-01-30 15:33:25 -05:00
Przemysław Witek 683170b007
Increase the number of indexed documents to increase a chance that there are at least 2 training rows. (#51607) (#51615) 2020-01-29 17:17:19 +01:00
Benjamin Trent fc994d9ce1
[ML][Inference] Adds validations for model PUT (#51376) (#51409)
Adds validations making sure that

* `input.field_names` is not empty
* `ensemble.trained_models` is not empty
* `tree.feature_names` is not empty

closes https://github.com/elastic/elasticsearch/issues/51354
2020-01-24 09:29:12 -05:00
David Kyle ca4b90a001
[ML] Calculate results and snapshot retention using latest bucket timestamps (#51061) (#51301)
The retention period is calculated relative to the last bucket result or snapshot
time rather than wall clock
2020-01-22 14:52:33 +00:00
Dimitris Athanasiou 59687a9384
[7.x][ML] Validate classification dependent_variable cardinality is at lea… (#51232) (#51309)
Data frame analytics classification currently only supports 2 classes for the
dependent variable. We were checking that the field's cardinality is not higher
than 2 but we should also check it is not less than that as otherwise the process
fails.

Backport of #51232
2020-01-22 16:51:16 +02:00
Benjamin Trent 2a73e849d6
[ML][Inference] fixing ingest IT tests (#51267) (#51311)
Converts InferenceIngestIT into a `ESRestTestCase`.

closes #51201
2020-01-22 09:50:17 -05:00
Przemysław Witek bfcfcdee33
[7.x] Do not copy mapping from dependent variable to prediction field in regression analysis (#51227) (#51288) 2020-01-22 12:36:24 +01:00
David Roberts 0fa7db9a95 [ML] Make datafeeds work with nanosecond time fields (#51180)
Allows ML datafeeds to work with time fields that have
the "date_nanos" type _and make use of the extra precision_.
(Previously datafeeds only worked with time fields that were
exact multiples of milliseconds.  So datafeeds would work
with "date_nanos" only if the extra precision over "date" was
not used.)

Relates #49889
2020-01-21 09:59:50 +00:00
Tom Veasey 32ec934b15
[7.x][ML] Assert top classes are ordered by score (#51028)
Backport #51003.
2020-01-16 12:23:15 +00:00
Benjamin Trent 72c270946f
[ML][Inference] Adding classification_weights to ensemble models (#50874) (#50994)
* [ML][Inference] Adding classification_weights to ensemble models

classification_weights are a way to allow models to
prefer specific classification results over others
this might be advantageous if classification value
probabilities are a known quantity and can improve
model error rates.
2020-01-14 12:40:25 -05:00
Tom Veasey de5713fa4b
[ML] Disable invalid assertion (#50988)
Backport #50986.
2020-01-14 17:35:00 +00:00
Dimitris Athanasiou 1d8cb3c741
[7.x][ML] Add num_top_feature_importance_values param to regression and classi… (#50914) (#50976)
Adds a new parameter to regression and classification that enables computation
of importance for the top most important features. The computation of the importance
is based on SHAP (SHapley Additive exPlanations) method.

Backport of #50914
2020-01-14 16:46:09 +02:00
Przemysław Witek 9c6ffdc2be
[7.x] Handle nested and aliased fields correctly when copying mapping. (#50918) (#50968) 2020-01-14 14:43:39 +01:00
Benjamin Trent fa116a6d26
[7.x] [ML][Inference] PUT API (#50852) (#50887)
* [ML][Inference] PUT API (#50852)

This adds the `PUT` API for creating trained models that support our format.

This includes

* HLRC change for the API
* API creation
* Validations of model format and call

* fixing backport
2020-01-12 10:59:11 -05:00
Dimitris Athanasiou 422422a2bc
[7.x][ML] Reuse SourceDestValidator for data frame analytics (#50841) (#50850)
This commit removes validation logic of source and dest indices
for data frame analytics and replaces it with using the common
`SourceDestValidator` class which is already used by transforms.
This way the validations and their messages become consistent
while we reduce code.

This means that where these validations fail the error messages
will be slightly different for data frame analytics.

Backport of #50841
2020-01-10 14:24:13 +02:00
Benjamin Trent cc0e64572a
[ML][Inference][HLRC] Add necessary lang ident classes (#50705) (#50794)
This adds the necessary named XContent classes to the HLRC for the lang ident model. This is so the HLRC can call `GET _ml/inference/lang_ident_model_1?include_definition=true` without XContent parsing errors.

The constructors are package private as since this classes are used exclusively within the pre-packaged model (and require the specific weights, etc. to be of any use).
2020-01-09 10:33:38 -05:00
Benjamin Trent 060e0a6277
[ML][Inference] Add support for models shipped as resources (#50680) (#50700)
This adds support for models that are shipped as resources in the ML plugin. The first of which is the `lang_ident` model.
2020-01-07 09:21:59 -05:00
Przemysław Witek 4116452d90
Implement testStopAndRestart for ClassificationIT (#50585) (#50698) 2020-01-07 13:41:37 +01:00
Przemysław Witek 8917c05df8
[7.x] Synchronize processInStream.close() call (#50581) 2020-01-03 10:23:51 +01:00
Przemysław Witek 4ecabe496f
Mute testStopAndRestart test case (#50551) 2020-01-02 15:28:20 +01:00
Christoph Büscher 1599af8428 Fix type conversion problem in Eclipse (#50549)
Eclipse 4.13 shows a type mismatch error in the affected line because it cannot
correctly infer the boolean return type for the method call. Assigning return
value to a local variable resolves this problem.
2020-01-02 14:29:20 +01:00
Przemysław Witek 3e3a93002f
[7.x] Fix accuracy metric (#50310) (#50433) 2019-12-20 15:34:38 +01:00
Przemysław Witek 14d95aae46
[7.x] Make each analysis report desired field mappings to be copied (#50219) (#50428) 2019-12-20 15:10:33 +01:00
Przemysław Witek 5bb668b866
[7.x] Get rid of maxClassesCardinality internal parameter (#50418) (#50423) 2019-12-20 14:24:23 +01:00
Przemysław Witek cc4bc797f9
[7.x] Implement `precision` and `recall` metrics for classification evaluation (#49671) (#50378) 2019-12-19 18:55:05 +01:00
Dimitris Athanasiou 447bac27d2
[7.x][ML] Delete unused data frame analytics state (#50243) (#50280)
This commit adds removal of unused data frame analytics state
from the _delete_expired_data API (and in extend th ML daily
maintenance task). At the moment the potential state docs
include the progress document and state for regression and
classification analyses.

Backport of #50243
2019-12-18 12:30:11 +00:00