2018-03-07 11:33:49 -05:00
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Database migration:
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update table TRM_CODESYSTEM_VER drop column RES_VERSION_ID;
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2018-03-11 16:46:59 -04:00
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drop constraint IDX_CSV_RESOURCEPID_AND_VER from table TRM_CODESYSTEM_VER
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2018-03-07 11:33:49 -05:00
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2018-03-10 18:31:27 -05:00
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TODO:
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In answer lists, figure out what to do with externally defined lists
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Comments for Loinc:
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2018-03-11 10:44:11 -04:00
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Overall
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- ValueSet and ConceptMap resources have a spot for copyright and
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contact information. Are there official values for these?
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2018-03-10 18:31:27 -05:00
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Answer Lists
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- Per the notes, there is no way in FHIR currently to map answer lists to
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codes based on context. For this reason, I am ignoring any entries in
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LoincAnswerListLink_Beta_1.csv where the "ApplicableContext" context is
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not empty. Is this correct?
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Parts
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- Only parts with a status of "ACTIVE" are being imported, any others are
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ignored.
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- The PartTypeName (e.g. "ADJUSTMENT") is ignored as there is no corresponding
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property in loinc.xml
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- PartDisplayName is not mapped
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2018-03-11 10:44:11 -04:00
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- Part links are not currently processed (it's not clear to me how to model
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these in FHIR, as CodeSystem.hierarchyMeaning has to be only one of 'is-a'
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or 'part-of' and presumably the 'is-a' relationship is more important.
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Part Mappings
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- I have made LOINC the source and SCT the target for the mappings in the
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ConceptMap resource. Does this seem like the appropriate orientation?
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- A canonical URI should be defined for the LOINC->SCT mapping ConceptMap
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resource. I have hardcoded "http://loinc.org/loinc-to-snomed" for now, but
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we should discuss what is appropriate.
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RSNA Playbook
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- A canonical URI should be defined for the "all RSNA playbook codes" ValueSet.
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I have hardcoded "http://loinc.org/rsna-codes" for now but we should discuss
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what is appropriate.
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- A name for the "RSNA Playbook" ValueSet is needed.
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- Just to confirm, the "all RSNA playbook codes" ValueSet should contain the
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loinc codes (e.g. "17787-3") and not the part codes (e.g. "LP199995-4")?
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- A codesystem URI for radlex RID and RPID codes is needed (currently
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"http://rid" and "http://rpid" are used as placeholders since I'm assuming
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these exist somewhere.
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- For mappings from loinc part codes to RadLex RIDs, are the codes considered
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equivalent (or would they be wider/narrower). They look equivalent to me.
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2018-03-10 18:31:27 -05:00
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2018-03-11 10:44:11 -04:00
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Document Ontology
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2018-03-11 11:02:13 -04:00
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- Per the SOW, "A value set containing terms in the LOINC Document Ontology
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will be created". Just to confirm, entries in this ValueSet are therefore
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LOINC terms (such as "11488-4 / Consultation Note") as opposed to part
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codes?
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2018-03-11 10:44:11 -04:00
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- Need to define a URI for the document ontology ValueSet. Currently I am
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using "http://loinc.org/document-ontology-codes"
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2018-03-07 11:33:49 -05:00
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2018-03-11 16:46:59 -04:00
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Top 2000
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- Need to define a URI for both ValueSets. Currently I am using
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"http://loinc.org/top-2000-lab-results-us" and
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"http://loinc.org/top-2000-lab-results-si"
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