2023-02-03 09:40:32 -05:00
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|
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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|
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
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|
<modelVersion>4.0.0</modelVersion>
|
2014-11-08 10:36:27 -05:00
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2023-02-03 09:40:32 -05:00
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<parent>
|
2021-06-15 10:36:05 -04:00
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|
<groupId>ca.uhn.hapi.fhir</groupId>
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|
<artifactId>hapi-fhir</artifactId>
|
GM1 Mergeback (#5203)
* version bump
* Bump to core release 6.0.22 (#5028)
* Bump to core release 6.0.16
* Bump to core version 6.0.20
* Fix errors thrown as a result of VersionSpecificWorkerContextWrapper
* Bump to core 6.0.22
* Resolve 5126 hfj res ver prov might cause migration error on db that automatically indexes the primary key (#5127)
* dropped old index FK_RESVERPROV_RES_PID on RES_PID column before adding IDX_RESVERPROV_RES_PID
* added changelog
* changed to valid version number
* changed to valid version number, need to be ordered by version number...
* 5123 - Use DEFAULT partition for server-based requests if none specified (#5124)
5123 - Use DEFAULT partition for server-based requests if none specified
* consent remove all suppresses next link in bundle (#5119)
* added FIXME with source of issue
* added FIXME with root cause
* added FIXME with root cause
* Providing solution to the issue and removing fixmes.
* Providing changelog
* auto-formatting.
* Adding new test.
* Adding a new test for standard paging
* let's try this and see if it works...?
* fix tests
* cleanup to trigger a new run
* fixing tests
---------
Co-authored-by: Ken Stevens <ken@smilecdr.com>
Co-authored-by: peartree <etienne.poirier@smilecdr.com>
* 5117 MDM Score for No Match Fields Should Not Be Included in Total Score (#5118)
* fix, test, changelog
* fix, test, changelog
---------
Co-authored-by: justindar <justin.dar@smilecdr.com>
* Rename file to force IT mode
* _source search parameter needs to support modifiers (#5095)
_source search parameter needs to support modifiers - added support form :contains, :missing, :above modifiers
* Fix HFQL docs (#5151)
* Expunge operation on codesystem may throw 500 internal error with precondition fail message. (#5156)
* Initial failing test.
* Solution with changelog.
* fixing format.
* Addressing comment from code review.
* fixing failing test.
---------
Co-authored-by: peartree <etienne.poirier@smilecdr.com>
* documentation update (#5154)
Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local>
* Fix hsql jdbc driver deps (#5168)
Avoid non-included classes in jdbc driver dependencies.
* $delete-expunge over 10k resources will now delete all resources (#5144)
* First commit with very rough fix and unit test.
* Refinements to ResourceIdListStep and Batch2DaoSvcImpl. Make LoadIdsStepTest pass. Enhance Batch2DaoSvcImplTest.
* Spotless
* Fix checkstyle errors.
* Fix test failures.
* Minor refactoring. New unit test. Finalize changelist.
* Spotless fix.
* Delete now useless code from unit test.
* Delete more useless code.
* Test pre-commit hook
* More spotless fixes.
* Address most code review feedback.
* Remove use of pageSize parameter and see if this breaks the pipeline.
* Remove use of pageSize parameter and see if this breaks the pipeline.
* Fix the noUrl case by passing an unlimited Pegeable instead. Effectively stop using page size for most databases.
* Deprecate the old method and have it call the new one by default.
* updating documentation (#5170)
Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local>
* _source search parameter modifiers for Subscription matching (#5159)
* _source search parameter modifiers for Subscription matching - test, implementation and changelog
* Removal of meta tags during updates do not trigger subscription (#5181)
* Initial failing test.
* adding solution;
fixing documentation;
* spotless apply
* adding changelog
* modifying current test
---------
Co-authored-by: peartree <etienne.poirier@smilecdr.com>
* Issue 5173 get gateway everything doesnt return all patients (#5174)
* Failing test
* Also set offset and count in base DAO override
* Changelog
* Fix for specific case where count has been set in parameters
* spotless
* Improve checks
---------
Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com>
* Do not 500 and continue IG ingestion when different IGs try to save different ValueSets with colliding FHIR IDs (#5175)
* First commit with failing unit test and small tweaks.
* Swallow resource version exceptions from colliding ValueSet OIDs and log a descriptive error instead. Add more detailed unit testing.
* Tweaks to logic and update the changelog. Reverse all changes to TermReadSvcImpl.
* Revert PackageResourceParsingSvc to release branch baseline.
* Accept code reviewer suggestion to change changelog description.
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
---------
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
* Fix link
* Remove target slf4j version
* dont use new API for a bit (#5191)
* Return DropIdGeneratorTask from the Builder to permit clients to mutate the (#5193)
DropIdGeneratorTask.
* Dqm performance bug update and provider loader fix (#5180)
* update tests, move properties, update operation loader
* update wip
* remove test
* fixing tests, adding config
* update config and provider loader
* fix bundles
* fix cache settings on tests
* version bump and change log
* version bump
* fix formatting
* CVE-2022-45868
* wip cve change
* cve h2 add back in
---------
Co-authored-by: justin.mckelvy <justin.mckelvy@smilecdr.com>
* bulkExportReuse with POST and GET (#5161)
* string manipulation
* Code to ensure bulkExportReuse works with POST and GET requests
* Added formatting changes
* Fixed tests that were not working
* Formatting
* Code clean up
* fixing test failures
* fixing test failures
* Removed arrOfParams to now utilize ObjectMapper
* Removing stack trace and adding an exception
* Fixed test issue
* formatting
* formatting
* Resolving code review comments
* Reduce size of subscription max results (#5194)
* Reduce MAX_SUBSCRIPTION_RESULTS to 10000
* Add changelog
* 5037 goldenresource remains when target resource deleted (#5038)
* draft test and fix
* remove unused fields
* remove unused fields
* remove unused fields
* draft test + solution for possible match case
* combine sql statement + more error checking
* add test case for possible duplicate
* add config for autodeleting grs
* refactoring, adding support for mongo, docs
* refactoring + fixing mongo queries
* add changelogs
* fix both way link removal
* clean up test comments
* rename method
* remove unnecessary bean
* merge master/resolve conflicts
* mvn spotless
* address comment
* changes to avoid version bumping
* spotless
* change error code
---------
Co-authored-by: justindar <justin.dar@smilecdr.com>
* dont use new API for a bit (#5190)
* licenses
* wip
* Fix API usage
* wip
* Version bump
---------
Co-authored-by: dotasek <david.otasek@smilecdr.com>
Co-authored-by: TynerGjs <132295567+TynerGjs@users.noreply.github.com>
Co-authored-by: Steve Corbett <137920358+steve-corbett-smilecdr@users.noreply.github.com>
Co-authored-by: Ken Stevens <khstevens@gmail.com>
Co-authored-by: Ken Stevens <ken@smilecdr.com>
Co-authored-by: peartree <etienne.poirier@smilecdr.com>
Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com>
Co-authored-by: justindar <justin.dar@smilecdr.com>
Co-authored-by: volodymyr-korzh <132366313+volodymyr-korzh@users.noreply.github.com>
Co-authored-by: Nathan Doef <n.doef@protonmail.com>
Co-authored-by: Etienne Poirier <33007955+epeartree@users.noreply.github.com>
Co-authored-by: TipzCM <leif.stawnyczy@gmail.com>
Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local>
Co-authored-by: michaelabuckley <michaelabuckley@gmail.com>
Co-authored-by: Luke deGruchy <luke.degruchy@smilecdr.com>
Co-authored-by: jmarchionatto <60409882+jmarchionatto@users.noreply.github.com>
Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com>
Co-authored-by: Justin McKelvy <60718638+Capt-Mac@users.noreply.github.com>
Co-authored-by: justin.mckelvy <justin.mckelvy@smilecdr.com>
Co-authored-by: LalithE <132382565+LalithE@users.noreply.github.com>
2023-08-15 15:32:10 -04:00
|
|
|
<version>6.9.3-SNAPSHOT</version>
|
2023-04-02 11:50:20 -04:00
|
|
|
|
2021-06-15 10:36:05 -04:00
|
|
|
<relativePath>../pom.xml</relativePath>
|
|
|
|
</parent>
|
2014-11-08 10:36:27 -05:00
|
|
|
|
|
|
|
<artifactId>hapi-deployable-pom</artifactId>
|
|
|
|
<packaging>pom</packaging>
|
2015-07-05 17:14:15 -04:00
|
|
|
|
2014-11-08 10:36:27 -05:00
|
|
|
<name>HAPI FHIR - Deployable Artifact Parent POM</name>
|
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|
2015-07-05 17:14:15 -04:00
|
|
|
<build>
|
|
|
|
<plugins>
|
2023-07-11 20:36:44 -04:00
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|
|
<!-- Anything deployable inherits the parent spotless configuration -->
|
|
|
|
<plugin>
|
|
|
|
<groupId>com.diffplug.spotless</groupId>
|
|
|
|
<artifactId>spotless-maven-plugin</artifactId>
|
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|
<inherited>true</inherited>
|
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</plugin>
|
2017-10-15 11:27:30 -04:00
|
|
|
<plugin>
|
|
|
|
<groupId>org.basepom.maven</groupId>
|
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|
|
<artifactId>duplicate-finder-maven-plugin</artifactId>
|
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<executions>
|
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<execution>
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<id>default</id>
|
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<phase>verify</phase>
|
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<goals>
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|
<goal>check</goal>
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</goals>
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<inherited>true</inherited>
|
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|
</execution>
|
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|
</executions>
|
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<configuration>
|
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|
|
<printEqualFiles>false</printEqualFiles>
|
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|
|
<failBuildInCaseOfDifferentContentConflict>true</failBuildInCaseOfDifferentContentConflict>
|
|
|
|
<failBuildInCaseOfEqualContentConflict>true</failBuildInCaseOfEqualContentConflict>
|
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|
<failBuildInCaseOfConflict>true</failBuildInCaseOfConflict>
|
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|
<checkCompileClasspath>true</checkCompileClasspath>
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<checkRuntimeClasspath>false</checkRuntimeClasspath>
|
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<checkTestClasspath>false</checkTestClasspath>
|
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<skip>false</skip>
|
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|
<quiet>false</quiet>
|
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|
|
<preferLocal>true</preferLocal>
|
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|
<useResultFile>true</useResultFile>
|
|
|
|
<resultFileMinClasspathCount>2</resultFileMinClasspathCount>
|
|
|
|
<resultFile>${project.build.directory}/duplicate-finder-result.xml</resultFile>
|
|
|
|
<ignoredDependencies>
|
|
|
|
<dependency>
|
|
|
|
<groupId>javax.el</groupId>
|
|
|
|
<artifactId>javax.el-api</artifactId>
|
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|
|
</dependency>
|
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|
|
<dependency>
|
|
|
|
<groupId>javax.mail</groupId>
|
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|
|
<artifactId>javax.mail-api</artifactId>
|
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|
|
</dependency>
|
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<dependency>
|
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|
|
<groupId>commons-logging</groupId>
|
|
|
|
<artifactId>commons-logging</artifactId>
|
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|
|
</dependency>
|
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|
|
<dependency>
|
|
|
|
<groupId>org.jscience</groupId>
|
|
|
|
<artifactId>jscience</artifactId>
|
|
|
|
</dependency>
|
2017-10-19 07:40:43 -04:00
|
|
|
<dependency>
|
|
|
|
<groupId>org.springframework</groupId>
|
|
|
|
<artifactId>spring-jcl</artifactId>
|
|
|
|
</dependency>
|
2018-04-30 15:04:35 -04:00
|
|
|
<dependency>
|
|
|
|
<groupId>org.springframework</groupId>
|
|
|
|
<artifactId>spring-jcl</artifactId>
|
|
|
|
</dependency>
|
|
|
|
<dependency>
|
|
|
|
<groupId>com.google.code.findbugs</groupId>
|
|
|
|
<artifactId>annotations</artifactId>
|
|
|
|
</dependency>
|
|
|
|
<dependency>
|
|
|
|
<groupId>org.apache.derby</groupId>
|
|
|
|
<artifactId>derbyclient</artifactId>
|
|
|
|
</dependency>
|
|
|
|
<dependency>
|
|
|
|
<groupId>org.apache.derby</groupId>
|
|
|
|
<artifactId>derbynet</artifactId>
|
|
|
|
</dependency>
|
|
|
|
<dependency>
|
|
|
|
<groupId>org.apache.derby</groupId>
|
|
|
|
<artifactId>derbyclient</artifactId>
|
|
|
|
</dependency>
|
2019-04-01 18:55:55 -04:00
|
|
|
<dependency>
|
|
|
|
<groupId>org.checkerframework</groupId>
|
|
|
|
<artifactId>checker-compat-qual</artifactId>
|
|
|
|
</dependency>
|
2019-09-22 08:58:17 -04:00
|
|
|
<dependency>
|
|
|
|
<groupId>org.apache.poi</groupId>
|
|
|
|
<artifactId>ooxml-schemas</artifactId>
|
|
|
|
</dependency>
|
2020-05-22 15:03:20 -04:00
|
|
|
<dependency>
|
|
|
|
<groupId>net.bytebuddy</groupId>
|
|
|
|
<artifactId>byte-buddy</artifactId>
|
|
|
|
</dependency>
|
2021-01-22 11:24:23 -05:00
|
|
|
<dependency>
|
|
|
|
<groupId>javax.xml.bind</groupId>
|
|
|
|
<artifactId>jaxb-api</artifactId>
|
|
|
|
</dependency>
|
2021-01-17 14:27:26 -05:00
|
|
|
<dependency>
|
|
|
|
<groupId>com.sun.xml.bind</groupId>
|
|
|
|
<artifactId>jaxb-impl</artifactId>
|
|
|
|
</dependency>
|
2017-10-15 11:27:30 -04:00
|
|
|
</ignoredDependencies>
|
2017-11-13 13:50:39 -05:00
|
|
|
<ignoredResourcePatterns>
|
2019-05-09 12:51:13 -04:00
|
|
|
<ignoredResourcePattern>.*\.txt$</ignoredResourcePattern>
|
|
|
|
<ignoredResourcePattern>.*\.html$</ignoredResourcePattern>
|
2019-09-22 08:58:17 -04:00
|
|
|
<ignoredResourcePattern>schemaorg_apache_xmlbeans.*</ignoredResourcePattern>
|
2022-12-20 12:05:15 -05:00
|
|
|
<ignoredResource>classpath.index</ignoredResource>
|
2017-11-02 11:38:43 -04:00
|
|
|
<ignoredResource>javac.bat</ignoredResource>
|
2018-04-30 15:04:35 -04:00
|
|
|
<ignoredResource>about.html</ignoredResource>
|
2018-05-14 17:38:40 -04:00
|
|
|
<ignoredResource>changelog.xml</ignoredResource>
|
2020-03-25 18:02:13 -04:00
|
|
|
<ignoredResource>.*/favicon.ico$</ignoredResource>
|
|
|
|
<ignoredResource>Log4j-charsets.properties</ignoredResource>
|
2017-11-13 13:50:39 -05:00
|
|
|
</ignoredResourcePatterns>
|
2017-10-15 11:27:30 -04:00
|
|
|
</configuration>
|
|
|
|
</plugin>
|
2015-07-05 17:14:15 -04:00
|
|
|
</plugins>
|
|
|
|
</build>
|
|
|
|
|
2014-11-08 10:36:27 -05:00
|
|
|
<reporting>
|
|
|
|
<plugins>
|
|
|
|
<plugin>
|
2019-04-24 21:37:41 -04:00
|
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
|
|
<artifactId>maven-project-info-reports-plugin</artifactId>
|
2015-06-21 22:10:13 -04:00
|
|
|
<configuration>
|
|
|
|
<skip>true</skip>
|
|
|
|
</configuration>
|
2014-11-08 10:36:27 -05:00
|
|
|
</plugin>
|
|
|
|
<plugin>
|
|
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
|
|
<artifactId>maven-javadoc-plugin</artifactId>
|
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|
|
<reportSets>
|
|
|
|
<reportSet>
|
|
|
|
<id>default</id>
|
|
|
|
<reports>
|
|
|
|
<report>javadoc</report>
|
|
|
|
</reports>
|
|
|
|
<configuration>
|
|
|
|
<links>
|
2020-03-17 13:28:59 -04:00
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-base</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-dstu2</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-dstu3</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-r4</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-r5</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-client</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-server</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-jpaserver-base</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-converter</link>
|
|
|
|
<link>https://hapifhir.io/hapi-fhir/apidocs/hapi-fhir-structures-validation</link>
|
2014-11-11 17:14:05 -05:00
|
|
|
<link>https://docs.oracle.com/javaee/7/api/</link>
|
2014-11-08 10:36:27 -05:00
|
|
|
</links>
|
2015-03-24 17:19:34 -04:00
|
|
|
<additionalparam>-Xdoclint:none</additionalparam>
|
2018-07-30 18:33:26 -04:00
|
|
|
<additionalJOption>-Xdoclint:none</additionalJOption>
|
2022-03-26 17:40:12 -04:00
|
|
|
<source>11</source>
|
2014-11-08 10:36:27 -05:00
|
|
|
</configuration>
|
|
|
|
</reportSet>
|
|
|
|
</reportSets>
|
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|
|
</plugin>
|
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|
|
</plugins>
|
|
|
|
</reporting>
|
|
|
|
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|
|
|
<profiles>
|
|
|
|
<profile>
|
|
|
|
<id>DIST</id>
|
|
|
|
<build>
|
|
|
|
<plugins>
|
|
|
|
<plugin>
|
|
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
|
|
<artifactId>maven-javadoc-plugin</artifactId>
|
|
|
|
<inherited>true</inherited>
|
|
|
|
<configuration>
|
|
|
|
<minmemory>128m</minmemory>
|
|
|
|
<maxmemory>1g</maxmemory>
|
|
|
|
<linksource>true</linksource>
|
|
|
|
<verbose>false</verbose>
|
|
|
|
<debug>false</debug>
|
2018-07-30 18:33:26 -04:00
|
|
|
<additionalJOption>-Xdoclint:none</additionalJOption>
|
2022-03-26 17:40:12 -04:00
|
|
|
<source>11</source>
|
2014-11-08 10:36:27 -05:00
|
|
|
</configuration>
|
|
|
|
<executions>
|
|
|
|
<execution>
|
|
|
|
<phase>package</phase>
|
|
|
|
<goals>
|
2019-09-22 15:52:49 -04:00
|
|
|
<goal>jar</goal>
|
2014-11-08 10:36:27 -05:00
|
|
|
</goals>
|
|
|
|
</execution>
|
|
|
|
</executions>
|
|
|
|
</plugin>
|
|
|
|
<plugin>
|
|
|
|
<groupId>org.apache.maven.plugins</groupId>
|
|
|
|
<artifactId>maven-source-plugin</artifactId>
|
|
|
|
<executions>
|
|
|
|
<execution>
|
|
|
|
<phase>package</phase>
|
|
|
|
<goals>
|
|
|
|
<goal>jar-no-fork</goal>
|
|
|
|
</goals>
|
|
|
|
</execution>
|
|
|
|
</executions>
|
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|
|
</plugin>
|
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<plugin>
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<groupId>org.codehaus.mojo</groupId>
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<artifactId>license-maven-plugin</artifactId>
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<executions>
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<execution>
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<id>first</id>
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<goals>
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<goal>update-file-header</goal>
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</goals>
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<phase>process-sources</phase>
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<configuration>
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2023-03-20 10:04:26 -04:00
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<addJavaLicenseAfterPackage>false</addJavaLicenseAfterPackage>
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2014-11-08 10:36:27 -05:00
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<licenseName>apache_v2</licenseName>
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<canUpdateDescription>true</canUpdateDescription>
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<canUpdateCopyright>true</canUpdateCopyright>
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2019-07-05 11:19:51 -04:00
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<trimHeaderLine>true</trimHeaderLine>
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2014-11-08 10:36:27 -05:00
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<roots>
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<root>src/main/java</root>
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</roots>
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</configuration>
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</execution>
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</executions>
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</plugin>
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</plugins>
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</build>
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</profile>
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</profiles>
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</project>
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