hapi-fhir/hapi-fhir-jpaserver-uhnfhirtest/derby_maintenance.txt

call SYSCS_UTIL.SYSCS_COMPRESS_TABLE('SA', 'HFJ_SEARCH_RESULT', 1);
CALL SYSCS_UTIL.SYSCS_INPLACE_COMPRESS_TABLE( 'SA', 'HFJ_SEARCH_RESULT', 0, 0, 1 );


dd if=/dev/urandom of=/opt/glassfish/tmp.tmp bs=1M count=500

# Reindex
curl -H "Authorization: Bearer " "http://fhirtest.uhn.ca/baseDstu3/\$mark-all-resources-for-reindexing"


# Delete all errored resources
update hfj_res_ver set forced_id_pid = null where res_id in (select res_id from hfj_resource where sp_index_status = 2);
update hfj_resource set forced_id_pid = null where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_history_tag where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_res_ver where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_forced_id where resource_pid in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_res_link where src_resource_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_res_link where target_resource_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_coords where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_date where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_number where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_quantity where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_string where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_token where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_spidx_uri where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_res_tag where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_search_result where resource_pid in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_res_param_present where res_id in (select res_id from hfj_resource where sp_index_status = 2);
delete from hfj_resource where res_id in (select res_id from hfj_resource where sp_index_status = 2);


# Delete resource by id
delete from hfj_res_link where src_resource_id = 16940 or target_resource_id = 16940;
delete from hfj_spidx_date where res_id = 16940;
delete from hfj_spidx_string where res_id = 16940;
delete from hfj_spidx_token where res_id = 16940;
delete from hfj_spidx_uri where res_id = 16940;
delete from hfj_spidx_quantity where res_id = 16940;
delete from hfj_search_result where resource_pid = 16940;
delete from hfj_res_ver where res_id = 16940;
delete from hfj_res_param_present where res_id = 16940;
update hfj_resource set forced_id_pid = null where res_id = 16940;
delete from hfj_forced_id where resource_pid = 16940;
delete from hfj_resource where res_id = 16940;


# Drop all tables
drop table hfj_history_tag cascade constraints;
drop table hfj_res_ver cascade constraints;
drop table hfj_forced_id cascade constraints;
drop table hfj_res_link cascade constraints;
drop table hfj_res_link cascade constraints;
drop table hfj_spidx_coords cascade constraints;
drop table hfj_spidx_date cascade constraints;
drop table hfj_spidx_number cascade constraints;
drop table hfj_spidx_quantity cascade constraints;
drop table hfj_spidx_string cascade constraints;
drop table hfj_spidx_token cascade constraints;
drop table hfj_spidx_uri cascade constraints;
drop table hfj_res_tag cascade constraints;
drop table hfj_search_result cascade constraints;
drop table hfj_res_param_present cascade constraints;
drop table hfj_resource cascade constraints;
drop table hfj_idx_cmp_string_uniq cascade constraints;
drop table hfj_search cascade constraints;
drop table hfj_search_include cascade constraints;
drop table hfj_search_parm cascade constraints;
drop table hfj_subscription cascade constraints;
drop table hfj_subscription_flag_res cascade constraints;
drop table hfj_tag_def cascade constraints;
drop table trm_codesystem cascade constraints;
drop table trm_codesystem_var cascade constraints;
drop table trm_concept cascade constraints;
drop table trm_concept_pc_link cascade constraints;
drop table trm_concept_property cascade constraints;

# Delete all resources
update hfj_res_ver set forced_id_pid = null where res_id in (select res_id from hfj_resource);
update hfj_resource set forced_id_pid = null where res_id in (select res_id from hfj_resource);
delete from hfj_history_tag where res_id in (select res_id from hfj_resource);
delete from hfj_res_ver where res_id in (select res_id from hfj_resource);
delete from hfj_forced_id where resource_pid in (select res_id from hfj_resource);
delete from hfj_res_link where src_resource_id in (select res_id from hfj_resource);
delete from hfj_res_link where target_resource_id in (select res_id from hfj_resource);
delete from hfj_spidx_coords where res_id in (select res_id from hfj_resource);
delete from hfj_spidx_date where res_id in (select res_id from hfj_resource);
delete from hfj_spidx_number where res_id in (select res_id from hfj_resource);
delete from hfj_spidx_quantity where res_id in (select res_id from hfj_resource);
delete from hfj_spidx_string where res_id in (select res_id from hfj_resource);
delete from hfj_spidx_token where res_id in (select res_id from hfj_resource);
delete from hfj_spidx_uri where res_id in (select res_id from hfj_resource);
delete from hfj_res_tag where res_id in (select res_id from hfj_resource);
delete from hfj_search_result where resource_pid in (select res_id from hfj_resource);
delete from hfj_res_param_present where res_id in (select res_id from hfj_resource);
delete from hfj_idx_cmp_string_uniq where res_id in (select res_id from hfj_resource);
delete from hfj_subscription_stats where res_id in (select res_id from hfj_resource);
delete from hfj_resource where res_id in (select res_id from hfj_resource);

# Correct Version issues
update hfj_resource
set res_ver = res_ver + 1
where res_id in (
   select distinct res.res_id from hfj_resource res
	inner join hfj_res_ver rv on (rv.res_id = res.res_id)
	where ((res.res_ver + 1) = (rv.res_ver))
)