2018-04-30 15:04:35 -04:00
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
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<modelVersion>4.0.0</modelVersion>
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<parent>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-deployable-pom</artifactId>
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2021-06-30 15:37:19 -04:00
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<version>5.5.0-PRE6-SNAPSHOT</version>
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2018-04-30 15:04:35 -04:00
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<relativePath>../../hapi-deployable-pom/pom.xml</relativePath>
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</parent>
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<artifactId>hapi-fhir-cli-api</artifactId>
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<packaging>jar</packaging>
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<name>HAPI FHIR - Command Line Client - API</name>
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<dependencies>
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<!-- This dependency includes the core HAPI-FHIR classes -->
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-base</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-jpaserver-base</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-cli-jpaserver</artifactId>
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<version>${project.version}</version>
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<type>jar</type>
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<classifier>classes</classifier>
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</dependency>
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2018-05-10 11:53:32 -04:00
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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2018-09-07 15:30:35 -04:00
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<artifactId>hapi-fhir-jpaserver-migrate</artifactId>
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<version>${project.version}</version>
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</dependency>
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2019-06-13 16:15:29 -04:00
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-test-utilities</artifactId>
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<version>${project.version}</version>
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<scope>test</scope>
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</dependency>
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2018-04-30 15:04:35 -04:00
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<dependency>
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<groupId>org.apache.commons</groupId>
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<artifactId>commons-compress</artifactId>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-structures-dstu2</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-structures-dstu3</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-structures-hl7org-dstu2</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-validation-resources-dstu2</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-validation-resources-dstu3</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>ch.qos.logback</groupId>
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<artifactId>logback-classic</artifactId>
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</dependency>
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<dependency>
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<groupId>javax.servlet</groupId>
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<artifactId>javax.servlet-api</artifactId>
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</dependency>
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<dependency>
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<groupId>commons-cli</groupId>
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<artifactId>commons-cli</artifactId>
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</dependency>
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2018-09-07 19:14:43 -04:00
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<dependency>
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<groupId>org.apache.derby</groupId>
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<artifactId>derby</artifactId>
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</dependency>
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2019-08-02 16:00:43 -04:00
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<dependency>
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<groupId>com.h2database</groupId>
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<artifactId>h2</artifactId>
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<scope>test</scope>
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</dependency>
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2018-09-07 19:14:43 -04:00
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<dependency>
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<groupId>org.mariadb.jdbc</groupId>
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<artifactId>mariadb-java-client</artifactId>
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</dependency>
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<dependency>
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<groupId>mysql</groupId>
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<artifactId>mysql-connector-java</artifactId>
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</dependency>
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<dependency>
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<groupId>org.postgresql</groupId>
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<artifactId>postgresql</artifactId>
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</dependency>
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<dependency>
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<groupId>com.microsoft.sqlserver</groupId>
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<artifactId>mssql-jdbc</artifactId>
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</dependency>
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2018-04-30 15:04:35 -04:00
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-core</artifactId>
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<exclusions>
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<exclusion>
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<artifactId>commons-logging</artifactId>
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<groupId>commons-logging</groupId>
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</exclusion>
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</exclusions>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-webmvc</artifactId>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-context</artifactId>
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<exclusions>
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<exclusion>
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<artifactId>xml-apis</artifactId>
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<groupId>xml-apis</groupId>
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</exclusion>
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</exclusions>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-beans</artifactId>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-tx</artifactId>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-context-support</artifactId>
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</dependency>
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<dependency>
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<groupId>org.springframework</groupId>
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<artifactId>spring-web</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-servlets</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-servlet</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-server</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-util</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty</groupId>
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<artifactId>jetty-webapp</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty.websocket</groupId>
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<artifactId>websocket-api</artifactId>
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</dependency>
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<dependency>
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<groupId>org.eclipse.jetty.websocket</groupId>
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<artifactId>websocket-client</artifactId>
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</dependency>
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<dependency>
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<groupId>org.slf4j</groupId>
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<artifactId>jcl-over-slf4j</artifactId>
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</dependency>
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<dependency>
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<groupId>org.thymeleaf</groupId>
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<artifactId>thymeleaf</artifactId>
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</dependency>
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<dependency>
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<groupId>org.thymeleaf</groupId>
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2018-11-15 05:35:50 -05:00
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<artifactId>thymeleaf-spring5</artifactId>
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2018-04-30 15:04:35 -04:00
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</dependency>
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2018-05-30 08:54:16 -04:00
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<!-- Dependencies for Schematron -->
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2018-04-30 15:04:35 -04:00
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<dependency>
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2018-05-14 17:38:40 -04:00
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<groupId>com.helger</groupId>
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<artifactId>ph-schematron</artifactId>
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2018-04-30 15:04:35 -04:00
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<exclusions>
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<exclusion>
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2018-05-30 08:54:16 -04:00
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<groupId>org.glassfish.jaxb</groupId>
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<artifactId>jaxb-runtime</artifactId>
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</exclusion>
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<exclusion>
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<groupId>org.glassfish.jaxb</groupId>
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<artifactId>jaxb-core</artifactId>
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</exclusion>
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<exclusion>
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<groupId>com.sun.istack</groupId>
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<artifactId>istack-commons-runtime</artifactId>
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2018-04-30 15:04:35 -04:00
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</exclusion>
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</exclusions>
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</dependency>
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<dependency>
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2018-05-14 17:38:40 -04:00
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<groupId>com.helger</groupId>
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<artifactId>ph-commons</artifactId>
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2018-04-30 15:04:35 -04:00
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</dependency>
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<dependency>
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<groupId>javax.xml.bind</groupId>
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<artifactId>jaxb-api</artifactId>
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</dependency>
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2018-12-22 20:13:03 -05:00
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<dependency>
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<groupId>org.glassfish.jaxb</groupId>
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<artifactId>jaxb-runtime</artifactId>
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2018-04-30 15:04:35 -04:00
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</dependency>
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2018-05-14 17:38:40 -04:00
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2018-04-30 15:04:35 -04:00
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<dependency>
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<groupId>org.fusesource.jansi</groupId>
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<artifactId>jansi</artifactId>
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</dependency>
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2019-10-06 17:55:10 -04:00
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<dependency>
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<groupId>org.flywaydb</groupId>
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<artifactId>flyway-core</artifactId>
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</dependency>
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2019-10-27 08:29:52 -04:00
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2019-10-22 17:10:58 -04:00
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<!-- Test Deps -->
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<dependency>
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<groupId>org.awaitility</groupId>
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<artifactId>awaitility</artifactId>
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<scope>test</scope>
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</dependency>
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Replacing Hibernate Search 5 with Hibernate Search 6 (#2190)
* Beginning work on converting to hibernate search 6
* replace all out of date properties
* replace all POM references to old versions
* remove the shaded ES jars as HS6 supports 7.9
* Convert "Bridges" to RoutingBinder and RoutingBridge
* Modernize all indexing annotations
* Begin refactoring of search queries (wip)
* Fix spatial API changes, work on BaseTermReadSvcImpl
* Most of the way through the various filter property conversions
* Finished i think with BaseTermReadSvcImpl
* Compiling, but definitely broken
* Start test compilation failures
* All tests compiling (i think)
* remove suggest keywords operation
* Fix bootstrap errors, still have to deal with transient fields
* Rollback CR
* More refactoring, got IDs baked back into docs
* Fix coord util, fix a few more fields which require projection
* merge fixes
* begin refactor of valuesetexpansion tests
* fix another test
* Update tests
* remove todos, add TestContainers
* Fix descendant in
* Add testcontainers, fix another test
* fix more tests, replace embedded es
* Rip out embedded elastic, replace with TestContainer
* merge conflicts for new analyzers
* Bump to CR2 for hibernate search 6. Add forgotten CLI dep. Add backwards compatible codecs
* Remove dead deps, update testcontainer
* Remove java-hamcrest
* Pull asserts up, refactor tests to pass in RP tests
* Update V2 check
* Remove suggest keyword tests
* Split line for testing
* Fix perhaps one of the dumbest programming mistakes in my career so far
* Refactor tests which no longer rely on a strict known order
* Fix up test config, disable log test temporarily
* Remove log4j from being transitively pulled in. re-enable test
* Update log4j exclusions with new bridge. Update test to check for core class
* Move dependency to root pom in dep management section
* Update changelog, add changelog for HS6 with ES requirements. Remove dead comment
* update testst, remove todos
* Add hibernate props provider method, add elastic regexp query
* Add todo for high level client builder
* Modify ElasticsearchRestClientFactory to support HTTPS hosts
* Remove protocol extraction from rest url
* do we even need to index this...?
* remove purge of non-indexed resources
* Add longer timeout to testcontainers
* Add task to add docker CLI to azure pipeline via task, for testcontainers
* WIP remove this
* Dont update version
* Add test for duplicate termconcepts
* Use real hibernate ORM methods
* merge issues
* Add partitionsettigns bean to match master
* Trying to debug testcontainers on azure...
* Trying to debug testcontainers on azure...
* Run even on previous failure
* Fix testcontainer port binds
* Add full text logs attaching, and test reporting
* I love yaml
* Remove comment
* Refactor delta remove to not do a once-over traversal and flatten all children pre-delete. Resolves transaction commit boundary issue
* Modify TX beheaviour
* wip
* Rework to use config and mocked beans for partition-aware lastN
* rework to not use beans and just inject vars i need for test, keps test envs cleaner
* update azure pipeline to only copy test results
* Remove erroneous publish
* Always get test logs
* Make it so indexing works,
* Add todos
* revert deleteByPid
* Work on test fixes
* Test fixes
* Test fixes
* Another test fix
* Test fix
* Work on tests
* Test fixes
* All tests passing locally
* Fix test failure
* FIx build error
* Rename usages of HibernateDialectProvider -> HibernatePropertiesProvider
* Update ngram of token filters
* Tidying
* subvert the purpose of hibernate elastic props builder to inject template
* dead space
* Rename changed class
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
2021-01-05 17:56:59 -05:00
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<dependency>
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<groupId>org.rauschig</groupId>
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<artifactId>jarchivelib</artifactId>
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<scope>test</scope>
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</dependency>
|
2019-10-22 17:10:58 -04:00
|
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|
|
Replacing Hibernate Search 5 with Hibernate Search 6 (#2190)
* Beginning work on converting to hibernate search 6
* replace all out of date properties
* replace all POM references to old versions
* remove the shaded ES jars as HS6 supports 7.9
* Convert "Bridges" to RoutingBinder and RoutingBridge
* Modernize all indexing annotations
* Begin refactoring of search queries (wip)
* Fix spatial API changes, work on BaseTermReadSvcImpl
* Most of the way through the various filter property conversions
* Finished i think with BaseTermReadSvcImpl
* Compiling, but definitely broken
* Start test compilation failures
* All tests compiling (i think)
* remove suggest keywords operation
* Fix bootstrap errors, still have to deal with transient fields
* Rollback CR
* More refactoring, got IDs baked back into docs
* Fix coord util, fix a few more fields which require projection
* merge fixes
* begin refactor of valuesetexpansion tests
* fix another test
* Update tests
* remove todos, add TestContainers
* Fix descendant in
* Add testcontainers, fix another test
* fix more tests, replace embedded es
* Rip out embedded elastic, replace with TestContainer
* merge conflicts for new analyzers
* Bump to CR2 for hibernate search 6. Add forgotten CLI dep. Add backwards compatible codecs
* Remove dead deps, update testcontainer
* Remove java-hamcrest
* Pull asserts up, refactor tests to pass in RP tests
* Update V2 check
* Remove suggest keyword tests
* Split line for testing
* Fix perhaps one of the dumbest programming mistakes in my career so far
* Refactor tests which no longer rely on a strict known order
* Fix up test config, disable log test temporarily
* Remove log4j from being transitively pulled in. re-enable test
* Update log4j exclusions with new bridge. Update test to check for core class
* Move dependency to root pom in dep management section
* Update changelog, add changelog for HS6 with ES requirements. Remove dead comment
* update testst, remove todos
* Add hibernate props provider method, add elastic regexp query
* Add todo for high level client builder
* Modify ElasticsearchRestClientFactory to support HTTPS hosts
* Remove protocol extraction from rest url
* do we even need to index this...?
* remove purge of non-indexed resources
* Add longer timeout to testcontainers
* Add task to add docker CLI to azure pipeline via task, for testcontainers
* WIP remove this
* Dont update version
* Add test for duplicate termconcepts
* Use real hibernate ORM methods
* merge issues
* Add partitionsettigns bean to match master
* Trying to debug testcontainers on azure...
* Trying to debug testcontainers on azure...
* Run even on previous failure
* Fix testcontainer port binds
* Add full text logs attaching, and test reporting
* I love yaml
* Remove comment
* Refactor delta remove to not do a once-over traversal and flatten all children pre-delete. Resolves transaction commit boundary issue
* Modify TX beheaviour
* wip
* Rework to use config and mocked beans for partition-aware lastN
* rework to not use beans and just inject vars i need for test, keps test envs cleaner
* update azure pipeline to only copy test results
* Remove erroneous publish
* Always get test logs
* Make it so indexing works,
* Add todos
* revert deleteByPid
* Work on test fixes
* Test fixes
* Test fixes
* Another test fix
* Test fix
* Work on tests
* Test fixes
* All tests passing locally
* Fix test failure
* FIx build error
* Rename usages of HibernateDialectProvider -> HibernatePropertiesProvider
* Update ngram of token filters
* Tidying
* subvert the purpose of hibernate elastic props builder to inject template
* dead space
* Rename changed class
Co-authored-by: jamesagnew <jamesagnew@gmail.com>
2021-01-05 17:56:59 -05:00
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</dependencies>
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2018-04-30 15:04:35 -04:00
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<build>
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<plugins>
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</plugins>
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</build>
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</project>
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