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Impl displayLanguage for $lookup (#2908) 

* Impl displayLanguage for $lookup - first cut

* Added original lookupCode method

* Added original lookupCode method to IFhirResourceDaoCodeSystem

* Added more test cases and changelog
This commit is contained in:
Frank Tao 2021-08-25 14:47:10 -04:00 committed by GitHub
parent d34b0ff093
commit 090a8b0821
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GPG Key ID: 4AEE18F83AFDEB23
30 changed files with 882 additions and 77 deletions
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16
hapi-fhir-base/src/main/java/ca/uhn/fhir/context/support/IValidationSupport.java
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@ -266,12 +266,26 @@ public interface IValidationSupport {
* other method in the support chain, so that they can be passed through the entire chain. Implementations of this interface may always safely ignore this parameter.
* @param theSystem The CodeSystem URL
* @param theCode The code
* @param theDisplayLanguage to filter out the designation by the display language, to return all designation, the this value to null
*/
@Nullable
default LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
default LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return null;
}
/**
* Look up a code using the system and code value
*
* @param theValidationSupportContext The validation support module will be passed in to this method. This is convenient in cases where the operation needs to make calls to
* other method in the support chain, so that they can be passed through the entire chain. Implementations of this interface may always safely ignore this parameter.
* @param theSystem The CodeSystem URL
* @param theCode The code
*/
@Nullable
default LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
return lookupCode(theValidationSupportContext, theSystem, theCode, null);
}
/**
* Returns <code>true</code> if the given valueset can be validated by the given
* validation support module

2
hapi-fhir-docs/src/main/java/ca/uhn/hapi/fhir/docs/ValidatorExamples.java
View File

@ -299,7 +299,7 @@ public class ValidatorExamples {
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
// TODO: implement (or return null if your implementation does not support this function)
return null;
}

4
hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/5_6_0/2905-lookup-display-language.yaml Normal file
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@ -0,0 +1,4 @@
---
type: add
issue: 2905
title: "Added displayLanguage support for CodeSystem $lookup operation to filter out designation by language."

3
hapi-fhir-jpaserver-api/src/main/java/ca/uhn/fhir/jpa/api/dao/IFhirResourceDaoCodeSystem.java
View File

@ -40,6 +40,9 @@ public interface IFhirResourceDaoCodeSystem<T extends IBaseResource, CD, CC> ext
@Nonnull
IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, CD theCoding, RequestDetails theRequestDetails);
@Nonnull
IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, CD theCoding, IPrimitiveType<String> theDisplayLanguage, RequestDetails theRequestDetails);
SubsumesResult subsumes(IPrimitiveType<String> theCodeA, IPrimitiveType<String> theCodeB, IPrimitiveType<String> theSystem, CD theCodingA, CD theCodingB, RequestDetails theRequestDetails);
IValidationSupport.CodeValidationResult validateCode(IIdType theCodeSystemId, IPrimitiveType<String> theCodeSystemUrl, IPrimitiveType<String> theVersion, IPrimitiveType<String> theCode, IPrimitiveType<String> theDisplay, CD theCoding, CC theCodeableConcept, RequestDetails theRequestDetails);

8
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/FhirResourceDaoValueSetDstu2.java
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@ -230,7 +230,13 @@ public class FhirResourceDaoValueSetDstu2 extends BaseHapiFhirResourceDao<ValueS
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, CodingDt theCoding, RequestDetails theRequest) {
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, CodingDt theCoding, RequestDetails theRequest) {
return lookupCode(theCode, theSystem, theCoding, null, theRequest);
}
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, CodingDt theCoding, IPrimitiveType<String> theDisplayLanguage, RequestDetails theRequest) {
boolean haveCoding = theCoding != null && isNotBlank(theCoding.getSystem()) && isNotBlank(theCoding.getCode());
boolean haveCode = theCode != null && theCode.isEmpty() == false;
boolean haveSystem = theSystem != null && theSystem.isEmpty() == false;

16
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoCodeSystemDstu3.java
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@ -87,10 +87,17 @@ public class FhirResourceDaoCodeSystemDstu3 extends BaseHapiFhirResourceDao<Code
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, Coding theCoding, RequestDetails theRequestDetails) {
return lookupCode(theCode, theSystem, theCoding, null, theRequestDetails);
}
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, Coding theCoding, IPrimitiveType<String> theDisplayLanguage, RequestDetails theRequestDetails) {
boolean haveCoding = theCoding != null && isNotBlank(theCoding.getSystem()) && isNotBlank(theCoding.getCode());
boolean haveCode = theCode != null && theCode.isEmpty() == false;
boolean haveSystem = theSystem != null && theSystem.isEmpty() == false;
boolean haveDisplayLanguage = theDisplayLanguage != null && theDisplayLanguage.isEmpty() == false;
if (!haveCoding && !(haveSystem && haveCode)) {
throw new InvalidRequestException("No code, coding, or codeableConcept provided to validate");
}
@ -112,11 +119,16 @@ public class FhirResourceDaoCodeSystemDstu3 extends BaseHapiFhirResourceDao<Code
system = theSystem.getValue();
}
String displayLanguage = null;
if (haveDisplayLanguage) {
displayLanguage = theDisplayLanguage.getValue();
}
ourLog.debug("Looking up {} / {}", system, code);
if (myValidationSupport.isCodeSystemSupported(new ValidationSupportContext(myValidationSupport), system)) {
ourLog.debug("Code system {} is supported", system);
IValidationSupport.LookupCodeResult result = myValidationSupport.lookupCode(new ValidationSupportContext(myValidationSupport), system, code);
IValidationSupport.LookupCodeResult result = myValidationSupport.lookupCode(new ValidationSupportContext(myValidationSupport), system, code, displayLanguage);
if (result != null) {
return result;
}

14
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r4/FhirResourceDaoCodeSystemR4.java
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@ -82,9 +82,16 @@ public class FhirResourceDaoCodeSystemR4 extends BaseHapiFhirResourceDao<CodeSys
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, Coding theCoding, RequestDetails theRequestDetails) {
return lookupCode(theCode, theSystem, theCoding, null, theRequestDetails);
}
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, Coding theCoding, IPrimitiveType<String> theDisplayLanguage, RequestDetails theRequestDetails) {
boolean haveCoding = theCoding != null && isNotBlank(theCoding.getSystem()) && isNotBlank(theCoding.getCode());
boolean haveCode = theCode != null && theCode.isEmpty() == false;
boolean haveSystem = theSystem != null && theSystem.isEmpty() == false;
boolean haveDisplayLanguage = theDisplayLanguage != null && theDisplayLanguage.isEmpty() == false;
if (!haveCoding && !(haveSystem && haveCode)) {
throw new InvalidRequestException("No code, coding, or codeableConcept provided to validate");
@ -107,12 +114,17 @@ public class FhirResourceDaoCodeSystemR4 extends BaseHapiFhirResourceDao<CodeSys
system = theSystem.getValue();
}
String displayLanguage = null;
if (haveDisplayLanguage) {
displayLanguage = theDisplayLanguage.getValue();
}
ourLog.debug("Looking up {} / {}", system, code);
if (myValidationSupport.isCodeSystemSupported(new ValidationSupportContext(myValidationSupport), system)) {
ourLog.debug("Code system {} is supported", system);
IValidationSupport.LookupCodeResult retVal = myValidationSupport.lookupCode(new ValidationSupportContext(myValidationSupport), system, code);
IValidationSupport.LookupCodeResult retVal = myValidationSupport.lookupCode(new ValidationSupportContext(myValidationSupport), system, code, displayLanguage);
if (retVal != null) {
return retVal;
}

17
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r5/FhirResourceDaoCodeSystemR5.java
View File

@ -55,7 +55,6 @@ import java.util.List;
import java.util.Set;
import static ca.uhn.fhir.jpa.dao.FhirResourceDaoValueSetDstu2.toStringOrNull;
import static ca.uhn.fhir.jpa.dao.dstu3.FhirResourceDaoValueSetDstu3.vsValidateCodeOptions;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
public class FhirResourceDaoCodeSystemR5 extends BaseHapiFhirResourceDao<CodeSystem> implements IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept> {
@ -87,10 +86,17 @@ public class FhirResourceDaoCodeSystemR5 extends BaseHapiFhirResourceDao<CodeSys
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, Coding theCoding, RequestDetails theRequestDetails) {
return lookupCode(theCode, theSystem, theCoding, null, theRequestDetails);
}
@Nonnull
@Override
public IValidationSupport.LookupCodeResult lookupCode(IPrimitiveType<String> theCode, IPrimitiveType<String> theSystem, Coding theCoding, IPrimitiveType<String> theDisplayLanguage, RequestDetails theRequestDetails) {
boolean haveCoding = theCoding != null && isNotBlank(theCoding.getSystem()) && isNotBlank(theCoding.getCode());
boolean haveCode = theCode != null && theCode.isEmpty() == false;
boolean haveSystem = theSystem != null && theSystem.isEmpty() == false;
boolean haveDisplayLanguage = theDisplayLanguage != null && theDisplayLanguage.isEmpty() == false;
if (!haveCoding && !(haveSystem && haveCode)) {
throw new InvalidRequestException("No code, coding, or codeableConcept provided to validate");
}
@ -112,12 +118,17 @@ public class FhirResourceDaoCodeSystemR5 extends BaseHapiFhirResourceDao<CodeSys
system = theSystem.getValue();
}
String displayLanguage = null;
if (haveDisplayLanguage) {
displayLanguage = theDisplayLanguage.getValue();
}
ourLog.info("Looking up {} / {}", system, code);
if (myValidationSupport.isCodeSystemSupported(new ValidationSupportContext(myValidationSupport), system)) {
ourLog.info("Code system {} is supported", system);
IValidationSupport.LookupCodeResult retVal = myValidationSupport.lookupCode(new ValidationSupportContext(myValidationSupport), system, code);
IValidationSupport.LookupCodeResult retVal = myValidationSupport.lookupCode(new ValidationSupportContext(myValidationSupport), system, code, displayLanguage);
if (retVal != null) {
return retVal;
}

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/BaseJpaResourceProviderValueSetDstu2.java
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@ -112,7 +112,7 @@ public class BaseJpaResourceProviderValueSetDstu2 extends JpaResourceProviderDst
startRequest(theServletRequest);
try {
IFhirResourceDaoCodeSystem<ValueSet, CodingDt, CodeableConceptDt> dao = (IFhirResourceDaoCodeSystem<ValueSet, CodingDt, CodeableConceptDt>) getDao();
IValidationSupport.LookupCodeResult result = dao.lookupCode(theCode, theSystem, theCoding, theRequestDetails);
IValidationSupport.LookupCodeResult result = dao.lookupCode(theCode, theSystem, theCoding, null, theRequestDetails);
if (result.isFound() == false) {
throw new ResourceNotFoundException("Unable to find code[" + result.getSearchedForCode() + "] in system[" + result.getSearchedForSystem() + "]");
}

7
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/dstu3/BaseJpaResourceProviderCodeSystemDstu3.java
View File

@ -53,7 +53,8 @@ public class BaseJpaResourceProviderCodeSystemDstu3 extends JpaResourceProviderD
@OperationParam(name = "code", min = 0, max = 1) CodeType theCode,
@OperationParam(name = "system", min = 0, max = 1) UriType theSystem,
@OperationParam(name = "coding", min = 0, max = 1) Coding theCoding,
@OperationParam(name="version", min=0, max=1) StringType theVersion,
@OperationParam(name = "version", min=0, max=1) StringType theVersion,
@OperationParam(name = "displayLanguage", min=0, max=1) CodeType theDisplayLanguage,
@OperationParam(name = "property", min = 0, max = OperationParam.MAX_UNLIMITED) List<CodeType> theProperties,
RequestDetails theRequestDetails
) {
@ -63,9 +64,9 @@ public class BaseJpaResourceProviderCodeSystemDstu3 extends JpaResourceProviderD
IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept> dao = (IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept>) getDao();
IValidationSupport.LookupCodeResult result;
if (theVersion != null) {
result = dao.lookupCode(theCode, new UriType(theSystem.getValue() + "|" + theVersion), theCoding, theRequestDetails);
result = dao.lookupCode(theCode, new UriType(theSystem.getValue() + "|" + theVersion), theCoding, theDisplayLanguage, theRequestDetails);
} else {
result = dao.lookupCode(theCode, theSystem, theCoding, theRequestDetails);
result = dao.lookupCode(theCode, theSystem, theCoding, theDisplayLanguage, theRequestDetails);
}
result.throwNotFoundIfAppropriate();
return (Parameters) result.toParameters(theRequestDetails.getFhirContext(), theProperties);

7
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/r4/BaseJpaResourceProviderCodeSystemR4.java
View File

@ -61,7 +61,8 @@ public class BaseJpaResourceProviderCodeSystemR4 extends JpaResourceProviderR4<C
@OperationParam(name="system", min=0, max=1) UriType theSystem,
@OperationParam(name="coding", min=0, max=1) Coding theCoding,
@OperationParam(name="version", min=0, max=1) StringType theVersion,
@OperationParam(name = "property", min = 0, max = OperationParam.MAX_UNLIMITED) List<CodeType> theProperties,
@OperationParam(name="displayLanguage", min=0, max=1) CodeType theDisplayLanguage,
@OperationParam(name="property", min = 0, max = OperationParam.MAX_UNLIMITED) List<CodeType> theProperties,
RequestDetails theRequestDetails
) {
@ -70,9 +71,9 @@ public class BaseJpaResourceProviderCodeSystemR4 extends JpaResourceProviderR4<C
IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept> dao = (IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept>) getDao();
IValidationSupport.LookupCodeResult result;
if (theVersion != null) {
result = dao.lookupCode(theCode, new UriType(theSystem.getValue() + "|" + theVersion), theCoding, theRequestDetails);
result = dao.lookupCode(theCode, new UriType(theSystem.getValue() + "|" + theVersion), theCoding, theDisplayLanguage, theRequestDetails);
} else {
result = dao.lookupCode(theCode, theSystem, theCoding, theRequestDetails);
result = dao.lookupCode(theCode, theSystem, theCoding, theDisplayLanguage, theRequestDetails);
}
result.throwNotFoundIfAppropriate();
return (Parameters) result.toParameters(theRequestDetails.getFhirContext(), theProperties);

5
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/r5/BaseJpaResourceProviderCodeSystemR5.java
View File

@ -60,6 +60,7 @@ public class BaseJpaResourceProviderCodeSystemR5 extends JpaResourceProviderR5<C
@OperationParam(name="system", min=0, max=1) UriType theSystem,
@OperationParam(name="coding", min=0, max=1) Coding theCoding,
@OperationParam(name="version", min=0, max=1) StringType theVersion,
@OperationParam(name="displayLanguage", min=0, max=1) CodeType theDisplayLanguage,
@OperationParam(name = "property", min = 0, max = OperationParam.MAX_UNLIMITED) List<CodeType> theProperties,
RequestDetails theRequestDetails
) {
@ -69,9 +70,9 @@ public class BaseJpaResourceProviderCodeSystemR5 extends JpaResourceProviderR5<C
IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept> dao = (IFhirResourceDaoCodeSystem<CodeSystem, Coding, CodeableConcept>) getDao();
IValidationSupport.LookupCodeResult result;
if (theVersion != null) {
result = dao.lookupCode(theCode, new UriType(theSystem.getValue() + "|" + theVersion), theCoding, theRequestDetails);
result = dao.lookupCode(theCode, new UriType(theSystem.getValue() + "|" + theVersion), theCoding, theDisplayLanguage, theRequestDetails);
} else {
result = dao.lookupCode(theCode, theSystem, theCoding, theRequestDetails);
result = dao.lookupCode(theCode, theSystem, theCoding, theDisplayLanguage, theRequestDetails);
}
result.throwNotFoundIfAppropriate();
return (Parameters) result.toParameters(theRequestDetails.getFhirContext(), theProperties);

25
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/BaseTermReadSvcImpl.java
View File

@ -1989,7 +1989,7 @@ public abstract class BaseTermReadSvcImpl implements ITermReadSvc {
protected abstract ValueSet toCanonicalValueSet(IBaseResource theValueSet);
protected IValidationSupport.LookupCodeResult lookupCode(String theSystem, String theCode) {
protected IValidationSupport.LookupCodeResult lookupCode(String theSystem, String theCode, String theDisplayLanguage) {
TransactionTemplate txTemplate = new TransactionTemplate(myTransactionManager);
return txTemplate.execute(t -> {
Optional<TermConcept> codeOpt = findCode(theSystem, theCode);
@ -2006,12 +2006,15 @@ public abstract class BaseTermReadSvcImpl implements ITermReadSvc {
for (TermConceptDesignation next : code.getDesignations()) {
IValidationSupport.ConceptDesignation designation = new IValidationSupport.ConceptDesignation();
designation.setLanguage(next.getLanguage());
designation.setUseSystem(next.getUseSystem());
designation.setUseCode(next.getUseCode());
designation.setUseDisplay(next.getUseDisplay());
designation.setValue(next.getValue());
result.getDesignations().add(designation);
// filter out the designation based on displayLanguage if any
if (isDisplayLanguageMatch(theDisplayLanguage, next.getLanguage())) {
designation.setLanguage(next.getLanguage());
designation.setUseSystem(next.getUseSystem());
designation.setUseCode(next.getUseCode());
designation.setUseDisplay(next.getUseDisplay());
designation.setValue(next.getValue());
result.getDesignations().add(designation);
}
}
for (TermConceptProperty next : code.getProperties()) {
@ -2034,6 +2037,7 @@ public abstract class BaseTermReadSvcImpl implements ITermReadSvc {
});
}
@Nullable
private ConceptSubsumptionOutcome testForSubsumption(SearchSession theSearchSession, TermConcept theLeft, TermConcept theRight, ConceptSubsumptionOutcome theOutput) {
List<TermConcept> fetch = theSearchSession.search(TermConcept.class)
@ -2481,4 +2485,11 @@ public abstract class BaseTermReadSvcImpl implements ITermReadSvc {
return termConcept;
}
static boolean isDisplayLanguageMatch(String theReqLang, String theStoredLang) {
// NOTE: return the designation when one of then is not specified.
if (theReqLang == null || theStoredLang == null)
return true;
return theReqLang.equalsIgnoreCase(theStoredLang);
}
}

4
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermReadSvcDstu3.java
View File

@ -145,8 +145,8 @@ public class TermReadSvcDstu3 extends BaseTermReadSvcImpl implements IValidation
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
return super.lookupCode(theSystem, theCode);
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return super.lookupCode(theSystem, theCode, theDisplayLanguage);
}
@Override

4
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermReadSvcR4.java
View File

@ -92,8 +92,8 @@ public class TermReadSvcR4 extends BaseTermReadSvcImpl implements ITermReadSvcR4
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
return super.lookupCode(theSystem, theCode);
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return super.lookupCode(theSystem, theCode, theDisplayLanguage);
}
@Override

4
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermReadSvcR5.java
View File

@ -144,8 +144,8 @@ public class TermReadSvcR5 extends BaseTermReadSvcImpl implements IValidationSup
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
return super.lookupCode(theSystem, theCode);
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return super.lookupCode(theSystem, theCode, theDisplayLanguage);
}
}

173
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/dstu3/ResourceProviderR3CodeSystemDesignationTest.java Normal file
View File

@ -0,0 +1,173 @@
package ca.uhn.fhir.jpa.provider.dstu3;
import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertNull;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import org.hl7.fhir.dstu3.model.BooleanType;
import org.hl7.fhir.dstu3.model.CodeSystem;
import org.hl7.fhir.dstu3.model.CodeType;
import org.hl7.fhir.dstu3.model.Parameters;
import org.hl7.fhir.dstu3.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.dstu3.model.StringType;
import org.hl7.fhir.dstu3.model.UriType;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.springframework.transaction.annotation.Transactional;
public class ResourceProviderR3CodeSystemDesignationTest extends BaseResourceProviderDstu3Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(ResourceProviderR3CodeSystemDesignationTest.class);
private static final String CS_ACME_URL = "http://acme.org";
@BeforeEach
@Transactional
public void before02() throws IOException {
CodeSystem cs = loadResourceFromClasspath(CodeSystem.class, "/extensional-case-3-cs-with-designations-lang.xml");
myCodeSystemDao.create(cs, mySrd).getId().toUnqualifiedVersionless();
}
@Test
public void testLookupWithDisplayLanguage() {
Parameters respParam = ourClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.andParameter("displayLanguage",new CodeType("de-AT"))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(2, designationList.size());
// 1. de-AT:Systolic blood pressure 12 hour minimum
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("de-AT", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("de-AT:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 2. Systolic blood pressure 12 hour minimum (no language)
designation = designationList.get(1);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
@Test
public void testLookupWithNonExistLanguage() {
Parameters respParam = ourClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.andParameter("displayLanguage",new CodeType("zh-CN"))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(1, designationList.size());
// 1. Systolic blood pressure 12 hour minimum (no language)
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
@Test
public void testLookupWithoutDisplayLanguage() {
Parameters respParam = ourClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(3, designationList.size());
// 1. fr-FR:Systolic blood pressure 12 hour minimum
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("fr-FR", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("fr-FR:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 2. de-AT:Systolic blood pressure 12 hour minimum
designation = designationList.get(1);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("de-AT", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("de-AT:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 3. Systolic blood pressure 12 hour minimum (no language)
designation = designationList.get(2);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
private List<ParametersParameterComponent> getDesignations(List<ParametersParameterComponent> parameterList) {
List<ParametersParameterComponent> designationList = new ArrayList<>();
for (ParametersParameterComponent parameter : parameterList) {
if ("designation".equals(parameter.getName()))
designationList.add(parameter);
}
return designationList;
}
}

59
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/BaseResourceProviderR4Test.java
View File

@ -1,5 +1,35 @@
package ca.uhn.fhir.jpa.provider.r4;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.List;
import java.util.concurrent.TimeUnit;
import org.apache.http.impl.client.CloseableHttpClient;
import org.apache.http.impl.client.HttpClientBuilder;
import org.apache.http.impl.conn.PoolingHttpClientConnectionManager;
import org.eclipse.jetty.server.Server;
import org.eclipse.jetty.servlet.ServletContextHandler;
import org.eclipse.jetty.servlet.ServletHolder;
import org.hl7.fhir.r4.model.Bundle;
import org.hl7.fhir.r4.model.Bundle.BundleEntryComponent;
import org.hl7.fhir.r4.model.Parameters;
import org.hl7.fhir.r4.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r4.model.Patient;
import org.junit.jupiter.api.AfterAll;
import org.junit.jupiter.api.AfterEach;
import org.junit.jupiter.api.BeforeEach;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.web.context.ContextLoader;
import org.springframework.web.context.WebApplicationContext;
import org.springframework.web.context.support.AnnotationConfigWebApplicationContext;
import org.springframework.web.context.support.GenericWebApplicationContext;
import org.springframework.web.context.support.WebApplicationContextUtils;
import org.springframework.web.cors.CorsConfiguration;
import org.springframework.web.servlet.DispatcherServlet;
import ca.uhn.fhir.context.support.IValidationSupport;
import ca.uhn.fhir.jpa.api.dao.DaoRegistry;
import ca.uhn.fhir.jpa.api.svc.ISearchCoordinatorSvc;
@ -26,35 +56,6 @@ import ca.uhn.fhir.rest.server.interceptor.ResponseHighlighterInterceptor;
import ca.uhn.fhir.rest.server.provider.DeleteExpungeProvider;
import ca.uhn.fhir.rest.server.provider.ReindexProvider;
import ca.uhn.fhir.test.utilities.JettyUtil;
import org.apache.http.impl.client.CloseableHttpClient;
import org.apache.http.impl.client.HttpClientBuilder;
import org.apache.http.impl.conn.PoolingHttpClientConnectionManager;
import org.eclipse.jetty.server.Server;
import org.eclipse.jetty.servlet.ServletContextHandler;
import org.eclipse.jetty.servlet.ServletHolder;
import org.hl7.fhir.r4.model.Bundle;
import org.hl7.fhir.r4.model.Bundle.BundleEntryComponent;
import org.hl7.fhir.r4.model.Parameters;
import org.hl7.fhir.r4.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r4.model.Patient;
import org.junit.jupiter.api.AfterAll;
import org.junit.jupiter.api.AfterEach;
import org.junit.jupiter.api.BeforeEach;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.web.context.ContextLoader;
import org.springframework.web.context.WebApplicationContext;
import org.springframework.web.context.support.AnnotationConfigWebApplicationContext;
import org.springframework.web.context.support.GenericWebApplicationContext;
import org.springframework.web.context.support.WebApplicationContextUtils;
import org.springframework.web.cors.CorsConfiguration;
import org.springframework.web.servlet.DispatcherServlet;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.List;
import java.util.concurrent.TimeUnit;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
public abstract class BaseResourceProviderR4Test extends BaseJpaR4Test {

173
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/ResourceProviderR4CodeSystemDesignationTest.java Normal file
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@ -0,0 +1,173 @@
package ca.uhn.fhir.jpa.provider.r4;
import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertNull;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import org.hl7.fhir.r4.model.BooleanType;
import org.hl7.fhir.r4.model.CodeSystem;
import org.hl7.fhir.r4.model.CodeType;
import org.hl7.fhir.r4.model.Parameters;
import org.hl7.fhir.r4.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r4.model.StringType;
import org.hl7.fhir.r4.model.UriType;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.springframework.transaction.annotation.Transactional;
public class ResourceProviderR4CodeSystemDesignationTest extends BaseResourceProviderR4Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(ResourceProviderR4CodeSystemDesignationTest.class);
private static final String CS_ACME_URL = "http://acme.org";
@BeforeEach
@Transactional
public void before02() throws IOException {
CodeSystem cs = loadResourceFromClasspath(CodeSystem.class, "/extensional-case-3-cs-with-designations-lang.xml");
myCodeSystemDao.create(cs, mySrd).getId().toUnqualifiedVersionless();
}
@Test
public void testLookupWithDisplayLanguage() {
Parameters respParam = myClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.andParameter("displayLanguage",new CodeType("de-AT"))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(2, designationList.size());
// 1. de-AT:Systolic blood pressure 12 hour minimum
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("de-AT", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("de-AT:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 2. Systolic blood pressure 12 hour minimum (no language)
designation = designationList.get(1);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
@Test
public void testLookupWithNonExistLanguage() {
Parameters respParam = myClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.andParameter("displayLanguage",new CodeType("zh-CN"))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(1, designationList.size());
// 1. Systolic blood pressure 12 hour minimum (no language)
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
@Test
public void testLookupWithoutDisplayLanguage() {
Parameters respParam = myClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(3, designationList.size());
// 1. fr-FR:Systolic blood pressure 12 hour minimum
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("fr-FR", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("fr-FR:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 2. de-AT:Systolic blood pressure 12 hour minimum
designation = designationList.get(1);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("de-AT", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("de-AT:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 3. Systolic blood pressure 12 hour minimum (no language)
designation = designationList.get(2);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
private List<ParametersParameterComponent> getDesignations(List<ParametersParameterComponent> parameterList) {
List<ParametersParameterComponent> designationList = new ArrayList<>();
for (ParametersParameterComponent parameter : parameterList) {
if ("designation".equals(parameter.getName()))
designationList.add(parameter);
}
return designationList;
}
}

173
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r5/ResourceProviderR5CodeSystemDesignationTest.java Normal file
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@ -0,0 +1,173 @@
package ca.uhn.fhir.jpa.provider.r5;
import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertNull;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import org.hl7.fhir.r5.model.BooleanType;
import org.hl7.fhir.r5.model.CodeSystem;
import org.hl7.fhir.r5.model.CodeType;
import org.hl7.fhir.r5.model.Parameters;
import org.hl7.fhir.r5.model.Parameters.ParametersParameterComponent;
import org.hl7.fhir.r5.model.StringType;
import org.hl7.fhir.r5.model.UriType;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.springframework.transaction.annotation.Transactional;
public class ResourceProviderR5CodeSystemDesignationTest extends BaseResourceProviderR5Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(ResourceProviderR5CodeSystemDesignationTest.class);
private static final String CS_ACME_URL = "http://acme.org";
@BeforeEach
@Transactional
public void before02() throws IOException {
CodeSystem cs = loadResourceFromClasspath(CodeSystem.class, "/extensional-case-3-cs-with-designations-lang.xml");
myCodeSystemDao.create(cs, mySrd).getId().toUnqualifiedVersionless();
}
@Test
public void testLookupWithDisplayLanguage() {
Parameters respParam = myClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.andParameter("displayLanguage",new CodeType("de-AT"))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(2, designationList.size());
// 1. de-AT:Systolic blood pressure 12 hour minimum
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("de-AT", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("de-AT:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 2. Systolic blood pressure 12 hour minimum (no language)
designation = designationList.get(1);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
@Test
public void testLookupWithNonExistLanguage() {
Parameters respParam = myClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.andParameter("displayLanguage",new CodeType("zh-CN"))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(1, designationList.size());
// 1. Systolic blood pressure 12 hour minimum (no language)
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
@Test
public void testLookupWithoutDisplayLanguage() {
Parameters respParam = myClient
.operation()
.onType(CodeSystem.class)
.named("lookup")
.withParameter(Parameters.class, "code", new CodeType("8494-7"))
.andParameter("system", new UriType(CS_ACME_URL))
.execute();
String resp = myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(respParam);
ourLog.info(resp);
List<ParametersParameterComponent> parameterList = respParam.getParameter();
List<ParametersParameterComponent> designationList = getDesignations(parameterList);
assertEquals("display", respParam.getParameter().get(0).getName());
assertEquals(("Systolic blood pressure 12 hour minimum"), ((StringType) respParam.getParameter().get(0).getValue()).getValue());
assertEquals("abstract", respParam.getParameter().get(1).getName());
assertEquals(false, ((BooleanType) respParam.getParameter().get(1).getValue()).getValue());
//-- designationList
assertEquals(3, designationList.size());
// 1. fr-FR:Systolic blood pressure 12 hour minimum
ParametersParameterComponent designation = designationList.get(0);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("fr-FR", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("fr-FR:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 2. de-AT:Systolic blood pressure 12 hour minimum
designation = designationList.get(1);
assertEquals("language", designation.getPart().get(0).getName());
assertEquals("de-AT", designation.getPart().get(0).getValue().toString());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("de-AT:Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
// 3. Systolic blood pressure 12 hour minimum (no language)
designation = designationList.get(2);
assertEquals("language", designation.getPart().get(0).getName());
assertNull(designation.getPart().get(0).getValue());
assertEquals("value", designation.getPart().get(2).getName());
assertEquals("Systolic blood pressure 12 hour minimum", designation.getPart().get(2).getValue().toString());
}
private List<ParametersParameterComponent> getDesignations(List<ParametersParameterComponent> parameterList) {
List<ParametersParameterComponent> designationList = new ArrayList<>();
for (ParametersParameterComponent parameter : parameterList) {
if ("designation".equals(parameter.getName()))
designationList.add(parameter);
}
return designationList;
}
}

10
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/term/TerminologySvcDeltaR4Test.java
View File

@ -369,7 +369,7 @@ public class TerminologySvcDeltaR4Test extends BaseJpaR4Test {
assertEquals("http://foo", outcome.getUrl());
assertEquals(CodeSystem.CodeSystemContentMode.NOTPRESENT, outcome.getContent());
IValidationSupport.LookupCodeResult lookup = myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "CBC");
IValidationSupport.LookupCodeResult lookup = myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "CBC", null);
assertEquals("Complete Blood Count", lookup.getCodeDisplay());
}
@ -433,7 +433,7 @@ public class TerminologySvcDeltaR4Test extends BaseJpaR4Test {
UploadStatistics outcome = myTermCodeSystemStorageSvc.applyDeltaCodeSystemsAdd("http://foo", delta);
assertEquals(2, outcome.getUpdatedConceptCount());
assertEquals("CODEA0", myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "codea").getCodeDisplay());
assertEquals("CODEA0", myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "codea", null).getCodeDisplay());
// Add codes again with different display
delta = new CustomTerminologySet();
@ -441,12 +441,12 @@ public class TerminologySvcDeltaR4Test extends BaseJpaR4Test {
delta.addRootConcept("codeb", "CODEB1");
outcome = myTermCodeSystemStorageSvc.applyDeltaCodeSystemsAdd("http://foo", delta);
assertEquals(2, outcome.getUpdatedConceptCount());
assertEquals("CODEA1", myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "codea").getCodeDisplay());
assertEquals("CODEA1", myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "codea", null).getCodeDisplay());
// Add codes again with no changes
outcome = myTermCodeSystemStorageSvc.applyDeltaCodeSystemsAdd("http://foo", delta);
assertEquals(2, outcome.getUpdatedConceptCount());
assertEquals("CODEA1", myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "codea").getCodeDisplay());
assertEquals("CODEA1", myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo", "codea", null).getCodeDisplay());
}
@Test
@ -483,7 +483,7 @@ public class TerminologySvcDeltaR4Test extends BaseJpaR4Test {
.setCode("useless_sct_code")
.setValue(new Coding("http://snomed.info", "1234567", "Choked on large meal (finding)"));
IValidationSupport.LookupCodeResult result = myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo/cs", "lunch");
IValidationSupport.LookupCodeResult result = myTermSvc.lookupCode(new ValidationSupportContext(myValidationSupport), "http://foo/cs", "lunch", null);
assertEquals(true, result.isFound());
assertEquals("lunch", result.getSearchedForCode());
assertEquals("http://foo/cs", result.getSearchedForSystem());

204
hapi-fhir-jpaserver-base/src/test/resources/extensional-case-3-cs-with-designations-lang.xml Normal file
View File

@ -0,0 +1,204 @@
<CodeSystem xmlns="http://hl7.org/fhir">
<url value="http://acme.org" />
<concept>
<code value="8450-9" />
<display value="Systolic blood pressure--expiration" />
<designation>
<language value="nl"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="Systolische bloeddruk - expiratie"/>
</designation>
<designation>
<language value="sv"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="Systoliskt blodtryck - utgång"/>
</designation>
</concept>
<concept>
<code value="11378-7" />
<display value="Systolic blood pressure at First encounter" />
<designation>
<language value="nl"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="NL:Systolic blood pressure at First encounter"/>
</designation>
<designation>
<language value="sv"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="SV:Systolic blood pressure at First encounter"/>
</designation>
</concept>
<concept>
<code value="8493-9" />
<display value="Systolic blood pressure 10 hour minimum" />
<designation>
<language value="fr-FR"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="fr-FR:Systolic blood pressure 10 hour minimum"/>
</designation>
<designation>
<language value="de-AT"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="de-AT:Systolic blood pressure 10 hour minimum"/>
</designation>
</concept>
<concept>
<code value="8494-7" />
<display value="Systolic blood pressure 12 hour minimum" />
<designation>
<language value="fr-FR"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="fr-FR:Systolic blood pressure 12 hour minimum"/>
</designation>
<designation>
<language value="de-AT"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="de-AT:Systolic blood pressure 12 hour minimum"/>
</designation>
<designation>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="Systolic blood pressure 12 hour minimum"/>
</designation>
</concept>
<concept>
<code value="8495-4" />
<display value="Systolic blood pressure 24 hour minimum" />
<designation>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="Systolic blood pressure 12 hour minimum"/>
</designation>
<designation>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="de-AT:Systolic blood pressure 12 hour minimum"/>
</designation>
</concept>
<concept>
<code value="8451-7" />
<display value="Systolic blood pressure--inspiration" />
</concept>
<concept>
<code value="8452-5" />
<display value="Systolic blood pressure.inspiration - expiration" />
</concept>
<concept>
<code value="8459-0" />
<display value="Systolic blood pressure--sitting" />
</concept>
<concept>
<code value="8460-8" />
<display value="Systolic blood pressure--standing" />
</concept>
<concept>
<code value="8461-6" />
<display value="Systolic blood pressure--supine" />
</concept>
<concept>
<code value="8479-8" />
<display value="Systolic blood pressure by palpation" />
</concept>
<concept>
<code value="8480-6" />
<display value="Systolic blood pressure" />
</concept>
<concept>
<code value="8481-4" />
<display value="Systolic blood pressure 1 hour maximum" />
</concept>
<concept>
<code value="8482-2" />
<display value="Systolic blood pressure 8 hour maximum" />
</concept>
<concept>
<code value="8483-0" />
<display value="Systolic blood pressure 10 hour maximum" />
</concept>
<concept>
<code value="8484-8" />
<display value="Systolic blood pressure 12 hour maximum" />
</concept>
<concept>
<code value="8485-5" />
<display value="Systolic blood pressure 24 hour maximum" />
</concept>
<concept>
<code value="8486-3" />
<display value="Systolic blood pressure 1 hour mean" />
</concept>
<concept>
<code value="8487-1" />
<display value="Systolic blood pressure 8 hour mean" />
</concept>
<concept>
<code value="8488-9" />
<display value="Systolic blood pressure 10 hour mean" />
</concept>
<concept>
<code value="8489-7" />
<display value="Systolic blood pressure 12 hour mean" />
</concept>
<concept>
<code value="8490-5" />
<display value="Systolic blood pressure 24 hour mean" />
</concept>
<concept>
<code value="8491-3" />
<display value="Systolic blood pressure 1 hour minimum" />
<designation>
<language value="nl"/>
<use>
<system value="http://snomed.info/sct"/>
<code value="900000000000013009"/>
<display value="Synonym"/>
</use>
<value value="Systolische bloeddruk minimaal 1 uur"/>
</designation>
</concept>
<concept>
<code value="8492-1" />
<display value="Systolic blood pressure 8 hour minimum" />
</concept>
</CodeSystem>

4
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/BaseValidationSupportWrapper.java
View File

@ -67,8 +67,8 @@ public class BaseValidationSupportWrapper extends BaseValidationSupport {
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
return myWrap.lookupCode(theValidationSupportContext, theSystem, theCode);
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return myWrap.lookupCode(theValidationSupportContext, theSystem, theCode, theDisplayLanguage);
}
@Override

4
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/CachingValidationSupport.java
View File

@ -111,9 +111,9 @@ public class CachingValidationSupport extends BaseValidationSupportWrapper imple
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
String key = "lookupCode " + theSystem + " " + theCode;
return loadFromCache(myLookupCodeCache, key, t -> super.lookupCode(theValidationSupportContext, theSystem, theCode));
return loadFromCache(myLookupCodeCache, key, t -> super.lookupCode(theValidationSupportContext, theSystem, theCode, theDisplayLanguage));
}
@Override

2
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/CommonCodeSystemsTerminologyService.java
View File

@ -211,7 +211,7 @@ public class CommonCodeSystemsTerminologyService implements IValidationSupport {
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
Map<String, String> map;
switch (theSystem) {

4
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/InMemoryTerminologyServerValidationSupport.java
View File

@ -345,7 +345,7 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return validateCode(theValidationSupportContext, new ConceptValidationOptions(), theSystem, theCode, null, null).asLookupCodeResult(theSystem, theCode);
}
@ -550,7 +550,7 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
if (theWantCode != null) {
if (theValidationSupportContext.getRootValidationSupport().isCodeSystemSupported(theValidationSupportContext, includeOrExcludeConceptSystemUrl)) {
LookupCodeResult lookup = theValidationSupportContext.getRootValidationSupport().lookupCode(theValidationSupportContext, includeOrExcludeConceptSystemUrl, theWantCode);
LookupCodeResult lookup = theValidationSupportContext.getRootValidationSupport().lookupCode(theValidationSupportContext, includeOrExcludeConceptSystemUrl, theWantCode, null);
if (lookup != null && lookup.isFound()) {
CodeSystem.ConceptDefinitionComponent conceptDefinition = new CodeSystem.ConceptDefinitionComponent()
.addConcept()

4
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/ValidationSupportChain.java
View File

@ -296,10 +296,10 @@ public class ValidationSupportChain implements IValidationSupport {
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
for (IValidationSupport next : myChain) {
if (next.isCodeSystemSupported(theValidationSupportContext, theSystem)) {
return next.lookupCode(theValidationSupportContext, theSystem, theCode);
return next.lookupCode(theValidationSupportContext, theSystem, theCode, theDisplayLanguage);
}
}
return null;

7
hapi-fhir-validation/src/test/java/ca/uhn/fhir/rest/server/interceptor/ResponseTerminologyDisplayPopulationInterceptorTest.java
View File

@ -141,9 +141,14 @@ public class ResponseTerminologyDisplayPopulationInterceptorTest {
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode, String theDisplayLanguage) {
return null;
}
@Override
public LookupCodeResult lookupCode(ValidationSupportContext theValidationSupportContext, String theSystem, String theCode) {
return lookupCode(theValidationSupportContext, theSystem, theCode, null);
}
}
}

2
hapi-fhir-validation/src/test/java/org/hl7/fhir/common/hapi/validation/support/CommonCodeSystemsTerminologyServiceTest.java
View File

@ -51,7 +51,7 @@ public class CommonCodeSystemsTerminologyServiceTest {
@Test
public void testUcum_LookupCode_UnknownSystem() {
IValidationSupport.LookupCodeResult outcome = mySvc.lookupCode(newSupport(), "http://foo", "AAAAA");
IValidationSupport.LookupCodeResult outcome = mySvc.lookupCode(newSupport(), "http://foo", "AAAAA", null);
assertNull(outcome);
}

2
hapi-fhir-validation/src/test/java/org/hl7/fhir/r4/validation/FhirInstanceValidatorR4Test.java
View File

@ -254,7 +254,7 @@ public class FhirInstanceValidatorR4Test extends BaseTest {
return retVal;
}
});
when(mockSupport.lookupCode(any(), any(), any())).thenAnswer(t -> {
when(mockSupport.lookupCode(any(), any(), any(), any())).thenAnswer(t -> {
String system = t.getArgument(1, String.class);
String code = t.getArgument(2, String.class);
if (myValidConcepts.contains(system + "___" + code)) {