Refactor prefetch generation out of discovery service. Add support for CRMI extensions.
This commit is contained in:
Brenin Rhodes
parent
90201095c4
commit
09eb56e2db
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@ -24,6 +24,11 @@ public class CdsCrConstants {
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public static final String CDS_CR_MODULE_ID = "CR";
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public static final String CDS_CR_MODULE_ID = "CR";
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public static final String CRMI_EFFECTIVE_DATA_REQUIREMENTS =
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"http://hl7.org/fhir/uv/crmi/StructureDefinition/crmi-effectiveDataRequirements";
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public static final String CQF_FHIR_QUERY_PATTERN = "http://hl7.org/fhir/StructureDefinition/cqf-fhirQueryPattern";
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// CDS Hook field names
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// CDS Hook field names
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public static final String CDS_PARAMETER_USER_ID = "userId";
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public static final String CDS_PARAMETER_USER_ID = "userId";
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public static final String CDS_PARAMETER_PATIENT_ID = "patientId";
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public static final String CDS_PARAMETER_PATIENT_ID = "patientId";
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@ -0,0 +1,35 @@
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/*-
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* #%L
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* HAPI FHIR - CDS Hooks
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* %%
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* Copyright (C) 2014 - 2024 Smile CDR, Inc.
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* %%
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* Licensed under the Apache License, Version 2.0 (the "License");
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* you may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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* #L%
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*/
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package ca.uhn.hapi.fhir.cdshooks.svc.cr.discovery;
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import org.opencds.cqf.fhir.api.Repository;
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public abstract class BasePrefetchTemplateBuilder {
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protected final String PATIENT_ID_CONTEXT = "{{context.patientId}}";
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protected final int DEFAULT_MAX_URI_LENGTH = 8000;
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protected int myMaxUriLength;
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protected final Repository myRepository;
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public BasePrefetchTemplateBuilder(Repository theRepository) {
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myRepository = theRepository;
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myMaxUriLength = DEFAULT_MAX_URI_LENGTH;
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}
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}
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@ -23,32 +23,24 @@ import ca.uhn.fhir.context.FhirVersionEnum;
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import ca.uhn.hapi.fhir.cdshooks.api.json.CdsServiceJson;
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import ca.uhn.hapi.fhir.cdshooks.api.json.CdsServiceJson;
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import ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrUtils;
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import ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrUtils;
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import org.hl7.fhir.dstu3.model.Coding;
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import org.hl7.fhir.dstu3.model.Coding;
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import org.hl7.fhir.dstu3.model.DataRequirement;
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import org.hl7.fhir.dstu3.model.Library;
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import org.hl7.fhir.dstu3.model.PlanDefinition;
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import org.hl7.fhir.dstu3.model.PlanDefinition;
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import org.hl7.fhir.dstu3.model.StringType;
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import org.hl7.fhir.dstu3.model.TriggerDefinition;
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import org.hl7.fhir.dstu3.model.ValueSet;
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import org.hl7.fhir.instance.model.api.IBaseResource;
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import org.hl7.fhir.instance.model.api.IBaseResource;
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import org.hl7.fhir.instance.model.api.IIdType;
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import org.hl7.fhir.instance.model.api.IIdType;
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import org.opencds.cqf.fhir.api.Repository;
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import org.opencds.cqf.fhir.api.Repository;
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import org.opencds.cqf.fhir.utility.dstu3.SearchHelper;
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import java.util.ArrayList;
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import java.util.stream.Collectors;
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import java.util.List;
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public class CrDiscoveryServiceDstu3 implements ICrDiscoveryService {
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public class CrDiscoveryServiceDstu3 implements ICrDiscoveryService {
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protected final String PATIENT_ID_CONTEXT = "{{context.patientId}}";
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protected final Repository myRepository;
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protected final int DEFAULT_MAX_URI_LENGTH = 8000;
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protected int myMaxUriLength;
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protected Repository myRepository;
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protected final IIdType myPlanDefinitionId;
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protected final IIdType myPlanDefinitionId;
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protected final PrefetchTemplateBuilderDstu3 myPrefetchTemplateBuilder;
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public CrDiscoveryServiceDstu3(IIdType thePlanDefinitionId, Repository theRepository) {
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public CrDiscoveryServiceDstu3(IIdType thePlanDefinitionId, Repository theRepository) {
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myPlanDefinitionId = thePlanDefinitionId;
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myPlanDefinitionId = thePlanDefinitionId;
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myRepository = theRepository;
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myRepository = theRepository;
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myMaxUriLength = DEFAULT_MAX_URI_LENGTH;
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myPrefetchTemplateBuilder = new PrefetchTemplateBuilderDstu3(myRepository);
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}
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}
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public CdsServiceJson resolveService() {
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public CdsServiceJson resolveService() {
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@ -59,12 +51,36 @@ public class CrDiscoveryServiceDstu3 implements ICrDiscoveryService {
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protected CdsServiceJson resolveService(IBaseResource thePlanDefinition) {
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protected CdsServiceJson resolveService(IBaseResource thePlanDefinition) {
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if (thePlanDefinition instanceof PlanDefinition) {
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if (thePlanDefinition instanceof PlanDefinition) {
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PlanDefinition planDef = (PlanDefinition) thePlanDefinition;
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PlanDefinition planDef = (PlanDefinition) thePlanDefinition;
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return new CrDiscoveryElementDstu3(planDef, getPrefetchUrlList(planDef)).getCdsServiceJson();
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String triggerEvent = getTriggerEvent(planDef);
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if (triggerEvent != null) {
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PrefetchUrlList prefetchUrlList =
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isEca(planDef) ? myPrefetchTemplateBuilder.getPrefetchUrlList(planDef) : new PrefetchUrlList();
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return new CrDiscoveryElementDstu3(planDef, prefetchUrlList).getCdsServiceJson();
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}
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}
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}
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return null;
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return null;
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}
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}
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public boolean isEca(PlanDefinition thePlanDefinition) {
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protected String getTriggerEvent(PlanDefinition thePlanDefinition) {
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if (thePlanDefinition == null
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|| !thePlanDefinition.hasAction()
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|| thePlanDefinition.getAction().stream().noneMatch(a -> a.hasTriggerDefinition())) {
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return null;
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}
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var triggerDefs = thePlanDefinition.getAction().stream()
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.filter(a -> a.hasTriggerDefinition())
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.flatMap(a -> a.getTriggerDefinition().stream())
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.filter(t -> t.getType().equals(TriggerDefinition.TriggerType.NAMEDEVENT))
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.collect(Collectors.toList());
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if (triggerDefs == null || triggerDefs.isEmpty()) {
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return null;
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}
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return triggerDefs.get(0).getEventName();
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}
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protected boolean isEca(PlanDefinition thePlanDefinition) {
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if (thePlanDefinition.hasType() && thePlanDefinition.getType().hasCoding()) {
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if (thePlanDefinition.hasType() && thePlanDefinition.getType().hasCoding()) {
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for (Coding coding : thePlanDefinition.getType().getCoding()) {
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for (Coding coding : thePlanDefinition.getType().getCoding()) {
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if (coding.getCode().equals("eca-rule")) {
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if (coding.getCode().equals("eca-rule")) {
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@ -74,372 +90,4 @@ public class CrDiscoveryServiceDstu3 implements ICrDiscoveryService {
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}
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}
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return false;
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return false;
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}
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}
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public Library resolvePrimaryLibrary(PlanDefinition thePlanDefinition) {
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// Assuming 1 library
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// TODO: enhance to handle multiple libraries - need a way to identify primary
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// library
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Library library = null;
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if (thePlanDefinition.hasLibrary()
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&& thePlanDefinition.getLibraryFirstRep().hasReference()) {
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library = myRepository.read(
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Library.class, thePlanDefinition.getLibraryFirstRep().getReferenceElement());
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}
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return library;
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}
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public List<String> resolveValueCodingCodes(List<Coding> theValueCodings) {
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List<String> result = new ArrayList<>();
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StringBuilder codes = new StringBuilder();
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for (Coding coding : theValueCodings) {
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if (coding.hasCode()) {
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String system = coding.getSystem();
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String code = coding.getCode();
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codes = getCodesStringBuilder(result, codes, system, code);
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}
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}
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result.add(codes.toString());
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return result;
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}
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public List<String> resolveValueSetCodes(StringType theValueSetId) {
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ValueSet valueSet = (ValueSet) SearchHelper.searchRepositoryByCanonical(myRepository, theValueSetId);
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List<String> result = new ArrayList<>();
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StringBuilder codes = new StringBuilder();
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if (valueSet.hasExpansion() && valueSet.getExpansion().hasContains()) {
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for (ValueSet.ValueSetExpansionContainsComponent contains :
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valueSet.getExpansion().getContains()) {
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String system = contains.getSystem();
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String code = contains.getCode();
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codes = getCodesStringBuilder(result, codes, system, code);
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}
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} else if (valueSet.hasCompose() && valueSet.getCompose().hasInclude()) {
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for (ValueSet.ConceptSetComponent concepts : valueSet.getCompose().getInclude()) {
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String system = concepts.getSystem();
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if (concepts.hasConcept()) {
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for (ValueSet.ConceptReferenceComponent concept : concepts.getConcept()) {
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String code = concept.getCode();
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codes = getCodesStringBuilder(result, codes, system, code);
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}
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}
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}
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}
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result.add(codes.toString());
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return result;
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}
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protected StringBuilder getCodesStringBuilder(
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List<String> theList, StringBuilder theCodes, String theSystem, String theCode) {
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String codeToken = theSystem + "|" + theCode;
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int postAppendLength = theCodes.length() + codeToken.length();
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if (theCodes.length() > 0 && postAppendLength < myMaxUriLength) {
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theCodes.append(",");
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} else if (postAppendLength > myMaxUriLength) {
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theList.add(theCodes.toString());
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theCodes = new StringBuilder();
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}
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theCodes.append(codeToken);
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return theCodes;
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}
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public List<String> createRequestUrl(DataRequirement theDataRequirement) {
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if (!isPatientCompartment(theDataRequirement.getType())) return null;
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String patientRelatedResource = theDataRequirement.getType() + "?"
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+ getPatientSearchParam(theDataRequirement.getType())
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+ "=Patient/" + PATIENT_ID_CONTEXT;
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List<String> ret = new ArrayList<>();
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if (theDataRequirement.hasCodeFilter()) {
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for (DataRequirement.DataRequirementCodeFilterComponent codeFilterComponent :
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theDataRequirement.getCodeFilter()) {
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if (!codeFilterComponent.hasPath()) continue;
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String path = mapCodePathToSearchParam(theDataRequirement.getType(), codeFilterComponent.getPath());
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StringType codeFilterComponentString = null;
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if (codeFilterComponent.hasValueSetStringType()) {
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codeFilterComponentString = codeFilterComponent.getValueSetStringType();
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} else if (codeFilterComponent.hasValueSetReference()) {
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codeFilterComponentString = new StringType(
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codeFilterComponent.getValueSetReference().getReference());
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} else if (codeFilterComponent.hasValueCoding()) {
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List<Coding> codeFilterValueCodings = codeFilterComponent.getValueCoding();
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boolean isFirstCodingInFilter = true;
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for (String code : resolveValueCodingCodes(codeFilterValueCodings)) {
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if (isFirstCodingInFilter) {
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ret.add(patientRelatedResource + "&" + path + "=" + code);
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} else {
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ret.add("," + code);
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}
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isFirstCodingInFilter = false;
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}
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}
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if (codeFilterComponentString != null) {
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for (String codes : resolveValueSetCodes(codeFilterComponentString)) {
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ret.add(patientRelatedResource + "&" + path + "=" + codes);
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}
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}
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}
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return ret;
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} else {
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ret.add(patientRelatedResource);
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return ret;
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}
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}
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public PrefetchUrlList getPrefetchUrlList(PlanDefinition thePlanDefinition) {
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PrefetchUrlList prefetchList = new PrefetchUrlList();
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if (thePlanDefinition == null) return null;
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if (!isEca(thePlanDefinition)) return null;
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Library library = resolvePrimaryLibrary(thePlanDefinition);
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// TODO: resolve data requirements
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if (!library.hasDataRequirement()) return null;
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for (DataRequirement dataRequirement : library.getDataRequirement()) {
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List<String> requestUrls = createRequestUrl(dataRequirement);
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if (requestUrls != null) {
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prefetchList.addAll(requestUrls);
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}
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}
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return prefetchList;
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}
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protected String mapCodePathToSearchParam(String theDataType, String thePath) {
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switch (theDataType) {
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case "MedicationAdministration":
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if (thePath.equals("medication")) return "code";
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break;
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case "MedicationDispense":
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if (thePath.equals("medication")) return "code";
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break;
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case "MedicationRequest":
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if (thePath.equals("medication")) return "code";
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break;
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case "MedicationStatement":
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if (thePath.equals("medication")) return "code";
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break;
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case "ProcedureRequest":
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if (thePath.equals("bodySite")) return "body-site";
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break;
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default:
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if (thePath.equals("vaccineCode")) return "vaccine-code";
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break;
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}
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return thePath.replace('.', '-').toLowerCase();
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}
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public static boolean isPatientCompartment(String theDataType) {
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if (theDataType == null) {
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return false;
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}
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switch (theDataType) {
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case "Account":
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case "AdverseEvent":
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case "AllergyIntolerance":
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case "Appointment":
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case "AppointmentResponse":
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case "AuditEvent":
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case "Basic":
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case "BodySite":
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case "CarePlan":
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case "CareTeam":
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case "ChargeItem":
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case "Claim":
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case "ClaimResponse":
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case "ClinicalImpression":
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case "Communication":
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case "CommunicationRequest":
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case "Composition":
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case "Condition":
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case "Consent":
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case "Coverage":
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case "DetectedIssue":
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case "DeviceRequest":
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case "DeviceUseStatement":
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case "DiagnosticReport":
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case "DocumentManifest":
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case "EligibilityRequest":
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case "Encounter":
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case "EnrollmentRequest":
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case "EpisodeOfCare":
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case "ExplanationOfBenefit":
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case "FamilyMemberHistory":
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case "Flag":
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case "Goal":
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case "Group":
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case "ImagingManifest":
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case "ImagingStudy":
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case "Immunization":
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case "ImmunizationRecommendation":
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case "List":
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case "MeasureReport":
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case "Media":
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case "MedicationAdministration":
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case "MedicationDispense":
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case "MedicationRequest":
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case "MedicationStatement":
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case "NutritionOrder":
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case "Observation":
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case "Patient":
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case "Person":
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case "Procedure":
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case "ProcedureRequest":
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case "Provenance":
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case "QuestionnaireResponse":
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case "ReferralRequest":
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case "RelatedPerson":
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case "RequestGroup":
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case "ResearchSubject":
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case "RiskAssessment":
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case "Schedule":
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case "Specimen":
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case "SupplyDelivery":
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case "SupplyRequest":
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case "VisionPrescription":
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return true;
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default:
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|
||||||
return false;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
public String getPatientSearchParam(String theDataType) {
|
|
||||||
switch (theDataType) {
|
|
||||||
case "Account":
|
|
||||||
return "subject";
|
|
||||||
case "AdverseEvent":
|
|
||||||
return "subject";
|
|
||||||
case "AllergyIntolerance":
|
|
||||||
return "patient";
|
|
||||||
case "Appointment":
|
|
||||||
return "actor";
|
|
||||||
case "AppointmentResponse":
|
|
||||||
return "actor";
|
|
||||||
case "AuditEvent":
|
|
||||||
return "patient";
|
|
||||||
case "Basic":
|
|
||||||
return "patient";
|
|
||||||
case "BodySite":
|
|
||||||
return "patient";
|
|
||||||
case "CarePlan":
|
|
||||||
return "patient";
|
|
||||||
case "CareTeam":
|
|
||||||
return "patient";
|
|
||||||
case "ChargeItem":
|
|
||||||
return "subject";
|
|
||||||
case "Claim":
|
|
||||||
return "patient";
|
|
||||||
case "ClaimResponse":
|
|
||||||
return "patient";
|
|
||||||
case "ClinicalImpression":
|
|
||||||
return "subject";
|
|
||||||
case "Communication":
|
|
||||||
return "subject";
|
|
||||||
case "CommunicationRequest":
|
|
||||||
return "subject";
|
|
||||||
case "Composition":
|
|
||||||
return "subject";
|
|
||||||
case "Condition":
|
|
||||||
return "patient";
|
|
||||||
case "Consent":
|
|
||||||
return "patient";
|
|
||||||
case "Coverage":
|
|
||||||
return "patient";
|
|
||||||
case "DetectedIssue":
|
|
||||||
return "patient";
|
|
||||||
case "DeviceRequest":
|
|
||||||
return "subject";
|
|
||||||
case "DeviceUseStatement":
|
|
||||||
return "subject";
|
|
||||||
case "DiagnosticReport":
|
|
||||||
return "subject";
|
|
||||||
case "DocumentManifest":
|
|
||||||
return "subject";
|
|
||||||
case "DocumentReference":
|
|
||||||
return "subject";
|
|
||||||
case "EligibilityRequest":
|
|
||||||
return "patient";
|
|
||||||
case "Encounter":
|
|
||||||
return "patient";
|
|
||||||
case "EnrollmentRequest":
|
|
||||||
return "subject";
|
|
||||||
case "EpisodeOfCare":
|
|
||||||
return "patient";
|
|
||||||
case "ExplanationOfBenefit":
|
|
||||||
return "patient";
|
|
||||||
case "FamilyMemberHistory":
|
|
||||||
return "patient";
|
|
||||||
case "Flag":
|
|
||||||
return "patient";
|
|
||||||
case "Goal":
|
|
||||||
return "patient";
|
|
||||||
case "Group":
|
|
||||||
return "member";
|
|
||||||
case "ImagingManifest":
|
|
||||||
return "patient";
|
|
||||||
case "ImagingStudy":
|
|
||||||
return "patient";
|
|
||||||
case "Immunization":
|
|
||||||
return "patient";
|
|
||||||
case "ImmunizationRecommendation":
|
|
||||||
return "patient";
|
|
||||||
case "List":
|
|
||||||
return "subject";
|
|
||||||
case "MeasureReport":
|
|
||||||
return "patient";
|
|
||||||
case "Media":
|
|
||||||
return "subject";
|
|
||||||
case "MedicationAdministration":
|
|
||||||
return "patient";
|
|
||||||
case "MedicationDispense":
|
|
||||||
return "patient";
|
|
||||||
case "MedicationRequest":
|
|
||||||
return "subject";
|
|
||||||
case "MedicationStatement":
|
|
||||||
return "subject";
|
|
||||||
case "NutritionOrder":
|
|
||||||
return "patient";
|
|
||||||
case "Observation":
|
|
||||||
return "subject";
|
|
||||||
case "Patient":
|
|
||||||
return "_id";
|
|
||||||
case "Person":
|
|
||||||
return "patient";
|
|
||||||
case "Procedure":
|
|
||||||
return "patient";
|
|
||||||
case "ProcedureRequest":
|
|
||||||
return "patient";
|
|
||||||
case "Provenance":
|
|
||||||
return "patient";
|
|
||||||
case "QuestionnaireResponse":
|
|
||||||
return "subject";
|
|
||||||
case "ReferralRequest":
|
|
||||||
return "patient";
|
|
||||||
case "RelatedPerson":
|
|
||||||
return "patient";
|
|
||||||
case "RequestGroup":
|
|
||||||
return "subject";
|
|
||||||
case "ResearchSubject":
|
|
||||||
return "individual";
|
|
||||||
case "RiskAssessment":
|
|
||||||
return "subject";
|
|
||||||
case "Schedule":
|
|
||||||
return "actor";
|
|
||||||
case "Specimen":
|
|
||||||
return "subject";
|
|
||||||
case "SupplyDelivery":
|
|
||||||
return "patient";
|
|
||||||
case "SupplyRequest":
|
|
||||||
return "subject";
|
|
||||||
case "VisionPrescription":
|
|
||||||
return "patient";
|
|
||||||
}
|
|
||||||
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
|
||||||
|
|
@ -24,31 +24,23 @@ import ca.uhn.hapi.fhir.cdshooks.api.json.CdsServiceJson;
|
||||||
import ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrUtils;
|
import ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrUtils;
|
||||||
import org.hl7.fhir.instance.model.api.IBaseResource;
|
import org.hl7.fhir.instance.model.api.IBaseResource;
|
||||||
import org.hl7.fhir.instance.model.api.IIdType;
|
import org.hl7.fhir.instance.model.api.IIdType;
|
||||||
import org.hl7.fhir.r4.model.CanonicalType;
|
|
||||||
import org.hl7.fhir.r4.model.Coding;
|
import org.hl7.fhir.r4.model.Coding;
|
||||||
import org.hl7.fhir.r4.model.DataRequirement;
|
|
||||||
import org.hl7.fhir.r4.model.Library;
|
|
||||||
import org.hl7.fhir.r4.model.PlanDefinition;
|
import org.hl7.fhir.r4.model.PlanDefinition;
|
||||||
import org.hl7.fhir.r4.model.ValueSet;
|
import org.hl7.fhir.r4.model.TriggerDefinition;
|
||||||
import org.opencds.cqf.fhir.api.Repository;
|
import org.opencds.cqf.fhir.api.Repository;
|
||||||
import org.opencds.cqf.fhir.utility.r4.SearchHelper;
|
|
||||||
|
|
||||||
import java.util.ArrayList;
|
import java.util.stream.Collectors;
|
||||||
import java.util.List;
|
|
||||||
|
|
||||||
public class CrDiscoveryServiceR4 implements ICrDiscoveryService {
|
public class CrDiscoveryServiceR4 implements ICrDiscoveryService {
|
||||||
|
|
||||||
protected final String PATIENT_ID_CONTEXT = "{{context.patientId}}";
|
|
||||||
protected final int DEFAULT_MAX_URI_LENGTH = 8000;
|
|
||||||
protected int myMaxUriLength;
|
|
||||||
|
|
||||||
protected final Repository myRepository;
|
protected final Repository myRepository;
|
||||||
protected final IIdType myPlanDefinitionId;
|
protected final IIdType myPlanDefinitionId;
|
||||||
|
protected final PrefetchTemplateBuilderR4 myPrefetchTemplateBuilder;
|
||||||
|
|
||||||
public CrDiscoveryServiceR4(IIdType thePlanDefinitionId, Repository theRepository) {
|
public CrDiscoveryServiceR4(IIdType thePlanDefinitionId, Repository theRepository) {
|
||||||
myPlanDefinitionId = thePlanDefinitionId;
|
myPlanDefinitionId = thePlanDefinitionId;
|
||||||
myRepository = theRepository;
|
myRepository = theRepository;
|
||||||
myMaxUriLength = DEFAULT_MAX_URI_LENGTH;
|
myPrefetchTemplateBuilder = new PrefetchTemplateBuilderR4(myRepository);
|
||||||
}
|
}
|
||||||
|
|
||||||
public CdsServiceJson resolveService() {
|
public CdsServiceJson resolveService() {
|
||||||
|
|
@ -59,12 +51,36 @@ public class CrDiscoveryServiceR4 implements ICrDiscoveryService {
|
||||||
protected CdsServiceJson resolveService(IBaseResource thePlanDefinition) {
|
protected CdsServiceJson resolveService(IBaseResource thePlanDefinition) {
|
||||||
if (thePlanDefinition instanceof PlanDefinition) {
|
if (thePlanDefinition instanceof PlanDefinition) {
|
||||||
PlanDefinition planDef = (PlanDefinition) thePlanDefinition;
|
PlanDefinition planDef = (PlanDefinition) thePlanDefinition;
|
||||||
return new CrDiscoveryElementR4(planDef, getPrefetchUrlList(planDef)).getCdsServiceJson();
|
String triggerEvent = getTriggerEvent(planDef);
|
||||||
|
if (triggerEvent != null) {
|
||||||
|
PrefetchUrlList prefetchUrlList =
|
||||||
|
isEca(planDef) ? myPrefetchTemplateBuilder.getPrefetchUrlList(planDef) : new PrefetchUrlList();
|
||||||
|
return new CrDiscoveryElementR4(planDef, prefetchUrlList).getCdsServiceJson();
|
||||||
|
}
|
||||||
}
|
}
|
||||||
return null;
|
return null;
|
||||||
}
|
}
|
||||||
|
|
||||||
public boolean isEca(PlanDefinition planDefinition) {
|
protected String getTriggerEvent(PlanDefinition thePlanDefinition) {
|
||||||
|
if (thePlanDefinition == null
|
||||||
|
|| !thePlanDefinition.hasAction()
|
||||||
|
|| thePlanDefinition.getAction().stream().noneMatch(a -> a.hasTrigger())) {
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
|
||||||
|
var triggerDefs = thePlanDefinition.getAction().stream()
|
||||||
|
.filter(a -> a.hasTrigger())
|
||||||
|
.flatMap(a -> a.getTrigger().stream())
|
||||||
|
.filter(t -> t.getType().equals(TriggerDefinition.TriggerType.NAMEDEVENT))
|
||||||
|
.collect(Collectors.toList());
|
||||||
|
if (triggerDefs == null || triggerDefs.isEmpty()) {
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
|
||||||
|
return triggerDefs.get(0).getName();
|
||||||
|
}
|
||||||
|
|
||||||
|
protected boolean isEca(PlanDefinition planDefinition) {
|
||||||
if (planDefinition.hasType() && planDefinition.getType().hasCoding()) {
|
if (planDefinition.hasType() && planDefinition.getType().hasCoding()) {
|
||||||
for (Coding coding : planDefinition.getType().getCoding()) {
|
for (Coding coding : planDefinition.getType().getCoding()) {
|
||||||
if (coding.getCode().equals("eca-rule")) {
|
if (coding.getCode().equals("eca-rule")) {
|
||||||
|
|
@ -74,356 +90,4 @@ public class CrDiscoveryServiceR4 implements ICrDiscoveryService {
|
||||||
}
|
}
|
||||||
return false;
|
return false;
|
||||||
}
|
}
|
||||||
|
|
||||||
public Library resolvePrimaryLibrary(PlanDefinition thePlanDefinition) {
|
|
||||||
// The CPGComputablePlanDefinition profile limits the cardinality of library to 1
|
|
||||||
Library library = null;
|
|
||||||
if (thePlanDefinition.hasLibrary() && !thePlanDefinition.getLibrary().isEmpty()) {
|
|
||||||
library = (Library) SearchHelper.searchRepositoryByCanonical(
|
|
||||||
myRepository, thePlanDefinition.getLibrary().get(0));
|
|
||||||
}
|
|
||||||
return library;
|
|
||||||
}
|
|
||||||
|
|
||||||
public List<String> resolveValueCodingCodes(List<Coding> valueCodings) {
|
|
||||||
List<String> result = new ArrayList<>();
|
|
||||||
|
|
||||||
StringBuilder codes = new StringBuilder();
|
|
||||||
for (Coding coding : valueCodings) {
|
|
||||||
if (coding.hasCode()) {
|
|
||||||
String system = coding.getSystem();
|
|
||||||
String code = coding.getCode();
|
|
||||||
|
|
||||||
codes = getCodesStringBuilder(result, codes, system, code);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
result.add(codes.toString());
|
|
||||||
return result;
|
|
||||||
}
|
|
||||||
|
|
||||||
public List<String> resolveValueSetCodes(CanonicalType valueSetId) {
|
|
||||||
ValueSet valueSet = (ValueSet) SearchHelper.searchRepositoryByCanonical(myRepository, valueSetId);
|
|
||||||
List<String> result = new ArrayList<>();
|
|
||||||
StringBuilder codes = new StringBuilder();
|
|
||||||
if (valueSet.hasExpansion() && valueSet.getExpansion().hasContains()) {
|
|
||||||
for (ValueSet.ValueSetExpansionContainsComponent contains :
|
|
||||||
valueSet.getExpansion().getContains()) {
|
|
||||||
String system = contains.getSystem();
|
|
||||||
String code = contains.getCode();
|
|
||||||
|
|
||||||
codes = getCodesStringBuilder(result, codes, system, code);
|
|
||||||
}
|
|
||||||
} else if (valueSet.hasCompose() && valueSet.getCompose().hasInclude()) {
|
|
||||||
for (ValueSet.ConceptSetComponent concepts : valueSet.getCompose().getInclude()) {
|
|
||||||
String system = concepts.getSystem();
|
|
||||||
if (concepts.hasConcept()) {
|
|
||||||
for (ValueSet.ConceptReferenceComponent concept : concepts.getConcept()) {
|
|
||||||
String code = concept.getCode();
|
|
||||||
|
|
||||||
codes = getCodesStringBuilder(result, codes, system, code);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
result.add(codes.toString());
|
|
||||||
return result;
|
|
||||||
}
|
|
||||||
|
|
||||||
protected StringBuilder getCodesStringBuilder(List<String> ret, StringBuilder codes, String system, String code) {
|
|
||||||
String codeToken = system + "|" + code;
|
|
||||||
int postAppendLength = codes.length() + codeToken.length();
|
|
||||||
|
|
||||||
if (codes.length() > 0 && postAppendLength < myMaxUriLength) {
|
|
||||||
codes.append(",");
|
|
||||||
} else if (postAppendLength > myMaxUriLength) {
|
|
||||||
ret.add(codes.toString());
|
|
||||||
codes = new StringBuilder();
|
|
||||||
}
|
|
||||||
codes.append(codeToken);
|
|
||||||
return codes;
|
|
||||||
}
|
|
||||||
|
|
||||||
public List<String> createRequestUrl(DataRequirement theDataRequirement) {
|
|
||||||
if (!isPatientCompartment(theDataRequirement.getType())) return null;
|
|
||||||
String patientRelatedResource = theDataRequirement.getType() + "?"
|
|
||||||
+ getPatientSearchParam(theDataRequirement.getType())
|
|
||||||
+ "=Patient/" + PATIENT_ID_CONTEXT;
|
|
||||||
List<String> ret = new ArrayList<>();
|
|
||||||
if (theDataRequirement.hasCodeFilter()) {
|
|
||||||
for (DataRequirement.DataRequirementCodeFilterComponent codeFilterComponent :
|
|
||||||
theDataRequirement.getCodeFilter()) {
|
|
||||||
if (!codeFilterComponent.hasPath()) continue;
|
|
||||||
String path = mapCodePathToSearchParam(theDataRequirement.getType(), codeFilterComponent.getPath());
|
|
||||||
if (codeFilterComponent.hasValueSetElement()) {
|
|
||||||
for (String codes : resolveValueSetCodes(codeFilterComponent.getValueSetElement())) {
|
|
||||||
ret.add(patientRelatedResource + "&" + path + "=" + codes);
|
|
||||||
}
|
|
||||||
} else if (codeFilterComponent.hasCode()) {
|
|
||||||
List<Coding> codeFilterValueCodings = codeFilterComponent.getCode();
|
|
||||||
boolean isFirstCodingInFilter = true;
|
|
||||||
for (String code : resolveValueCodingCodes(codeFilterValueCodings)) {
|
|
||||||
if (isFirstCodingInFilter) {
|
|
||||||
ret.add(patientRelatedResource + "&" + path + "=" + code);
|
|
||||||
} else {
|
|
||||||
ret.add("," + code);
|
|
||||||
}
|
|
||||||
|
|
||||||
isFirstCodingInFilter = false;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return ret;
|
|
||||||
} else {
|
|
||||||
ret.add(patientRelatedResource);
|
|
||||||
return ret;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
public PrefetchUrlList getPrefetchUrlList(PlanDefinition thePlanDefinition) {
|
|
||||||
PrefetchUrlList prefetchList = new PrefetchUrlList();
|
|
||||||
if (thePlanDefinition == null) return null;
|
|
||||||
if (!isEca(thePlanDefinition)) return null;
|
|
||||||
Library library = resolvePrimaryLibrary(thePlanDefinition);
|
|
||||||
// TODO: resolve data requirements
|
|
||||||
if (library == null || !library.hasDataRequirement()) return null;
|
|
||||||
for (DataRequirement dataRequirement : library.getDataRequirement()) {
|
|
||||||
List<String> requestUrls = createRequestUrl(dataRequirement);
|
|
||||||
if (requestUrls != null) {
|
|
||||||
prefetchList.addAll(requestUrls);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return prefetchList;
|
|
||||||
}
|
|
||||||
|
|
||||||
protected String mapCodePathToSearchParam(String theDataType, String thePath) {
|
|
||||||
switch (theDataType) {
|
|
||||||
case "MedicationAdministration":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
case "MedicationDispense":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
case "MedicationRequest":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
case "MedicationStatement":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
default:
|
|
||||||
if (thePath.equals("vaccineCode")) return "vaccine-code";
|
|
||||||
break;
|
|
||||||
}
|
|
||||||
return thePath.replace('.', '-').toLowerCase();
|
|
||||||
}
|
|
||||||
|
|
||||||
public static boolean isPatientCompartment(String theDataType) {
|
|
||||||
if (theDataType == null) {
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
switch (theDataType) {
|
|
||||||
case "Account":
|
|
||||||
case "AdverseEvent":
|
|
||||||
case "AllergyIntolerance":
|
|
||||||
case "Appointment":
|
|
||||||
case "AppointmentResponse":
|
|
||||||
case "AuditEvent":
|
|
||||||
case "Basic":
|
|
||||||
case "BodyStructure":
|
|
||||||
case "CarePlan":
|
|
||||||
case "CareTeam":
|
|
||||||
case "ChargeItem":
|
|
||||||
case "Claim":
|
|
||||||
case "ClaimResponse":
|
|
||||||
case "ClinicalImpression":
|
|
||||||
case "Communication":
|
|
||||||
case "CommunicationRequest":
|
|
||||||
case "Composition":
|
|
||||||
case "Condition":
|
|
||||||
case "Consent":
|
|
||||||
case "Coverage":
|
|
||||||
case "CoverageEligibilityRequest":
|
|
||||||
case "CoverageEligibilityResponse":
|
|
||||||
case "DetectedIssue":
|
|
||||||
case "DeviceRequest":
|
|
||||||
case "DeviceUseStatement":
|
|
||||||
case "DiagnosticReport":
|
|
||||||
case "DocumentManifest":
|
|
||||||
case "DocumentReference":
|
|
||||||
case "Encounter":
|
|
||||||
case "EnrollmentRequest":
|
|
||||||
case "EpisodeOfCare":
|
|
||||||
case "ExplanationOfBenefit":
|
|
||||||
case "FamilyMemberHistory":
|
|
||||||
case "Flag":
|
|
||||||
case "Goal":
|
|
||||||
case "Group":
|
|
||||||
case "ImagingStudy":
|
|
||||||
case "Immunization":
|
|
||||||
case "ImmunizationEvaluation":
|
|
||||||
case "ImmunizationRecommendation":
|
|
||||||
case "Invoice":
|
|
||||||
case "List":
|
|
||||||
case "MeasureReport":
|
|
||||||
case "Media":
|
|
||||||
case "MedicationAdministration":
|
|
||||||
case "MedicationDispense":
|
|
||||||
case "MedicationRequest":
|
|
||||||
case "MedicationStatement":
|
|
||||||
case "MolecularSequence":
|
|
||||||
case "NutritionOrder":
|
|
||||||
case "Observation":
|
|
||||||
case "Patient":
|
|
||||||
case "Person":
|
|
||||||
case "Procedure":
|
|
||||||
case "Provenance":
|
|
||||||
case "QuestionnaireResponse":
|
|
||||||
case "RelatedPerson":
|
|
||||||
case "RequestGroup":
|
|
||||||
case "ResearchSubject":
|
|
||||||
case "RiskAssessment":
|
|
||||||
case "Schedule":
|
|
||||||
case "ServiceRequest":
|
|
||||||
case "Specimen":
|
|
||||||
case "SupplyDelivery":
|
|
||||||
case "SupplyRequest":
|
|
||||||
case "VisionPrescription":
|
|
||||||
return true;
|
|
||||||
default:
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
public String getPatientSearchParam(String theDataType) {
|
|
||||||
switch (theDataType) {
|
|
||||||
case "Account":
|
|
||||||
return "subject";
|
|
||||||
case "AdverseEvent":
|
|
||||||
return "subject";
|
|
||||||
case "AllergyIntolerance":
|
|
||||||
return "patient";
|
|
||||||
case "Appointment":
|
|
||||||
return "actor";
|
|
||||||
case "AppointmentResponse":
|
|
||||||
return "actor";
|
|
||||||
case "AuditEvent":
|
|
||||||
return "patient";
|
|
||||||
case "Basic":
|
|
||||||
return "patient";
|
|
||||||
case "BodyStructure":
|
|
||||||
return "patient";
|
|
||||||
case "CarePlan":
|
|
||||||
return "patient";
|
|
||||||
case "CareTeam":
|
|
||||||
return "patient";
|
|
||||||
case "ChargeItem":
|
|
||||||
return "subject";
|
|
||||||
case "Claim":
|
|
||||||
return "patient";
|
|
||||||
case "ClaimResponse":
|
|
||||||
return "patient";
|
|
||||||
case "ClinicalImpression":
|
|
||||||
return "subject";
|
|
||||||
case "Communication":
|
|
||||||
return "subject";
|
|
||||||
case "CommunicationRequest":
|
|
||||||
return "subject";
|
|
||||||
case "Composition":
|
|
||||||
return "subject";
|
|
||||||
case "Condition":
|
|
||||||
return "patient";
|
|
||||||
case "Consent":
|
|
||||||
return "patient";
|
|
||||||
case "Coverage":
|
|
||||||
return "policy-holder";
|
|
||||||
case "DetectedIssue":
|
|
||||||
return "patient";
|
|
||||||
case "DeviceRequest":
|
|
||||||
return "subject";
|
|
||||||
case "DeviceUseStatement":
|
|
||||||
return "subject";
|
|
||||||
case "DiagnosticReport":
|
|
||||||
return "subject";
|
|
||||||
case "DocumentManifest":
|
|
||||||
return "subject";
|
|
||||||
case "DocumentReference":
|
|
||||||
return "subject";
|
|
||||||
case "Encounter":
|
|
||||||
return "patient";
|
|
||||||
case "EnrollmentRequest":
|
|
||||||
return "subject";
|
|
||||||
case "EpisodeOfCare":
|
|
||||||
return "patient";
|
|
||||||
case "ExplanationOfBenefit":
|
|
||||||
return "patient";
|
|
||||||
case "FamilyMemberHistory":
|
|
||||||
return "patient";
|
|
||||||
case "Flag":
|
|
||||||
return "patient";
|
|
||||||
case "Goal":
|
|
||||||
return "patient";
|
|
||||||
case "Group":
|
|
||||||
return "member";
|
|
||||||
case "ImagingStudy":
|
|
||||||
return "patient";
|
|
||||||
case "Immunization":
|
|
||||||
return "patient";
|
|
||||||
case "ImmunizationRecommendation":
|
|
||||||
return "patient";
|
|
||||||
case "Invoice":
|
|
||||||
return "subject";
|
|
||||||
case "List":
|
|
||||||
return "subject";
|
|
||||||
case "MeasureReport":
|
|
||||||
return "patient";
|
|
||||||
case "Media":
|
|
||||||
return "subject";
|
|
||||||
case "MedicationAdministration":
|
|
||||||
return "patient";
|
|
||||||
case "MedicationDispense":
|
|
||||||
return "patient";
|
|
||||||
case "MedicationRequest":
|
|
||||||
return "subject";
|
|
||||||
case "MedicationStatement":
|
|
||||||
return "subject";
|
|
||||||
case "MolecularSequence":
|
|
||||||
return "patient";
|
|
||||||
case "NutritionOrder":
|
|
||||||
return "patient";
|
|
||||||
case "Observation":
|
|
||||||
return "subject";
|
|
||||||
case "Patient":
|
|
||||||
return "_id";
|
|
||||||
case "Person":
|
|
||||||
return "patient";
|
|
||||||
case "Procedure":
|
|
||||||
return "patient";
|
|
||||||
case "Provenance":
|
|
||||||
return "patient";
|
|
||||||
case "QuestionnaireResponse":
|
|
||||||
return "subject";
|
|
||||||
case "RelatedPerson":
|
|
||||||
return "patient";
|
|
||||||
case "RequestGroup":
|
|
||||||
return "subject";
|
|
||||||
case "ResearchSubject":
|
|
||||||
return "individual";
|
|
||||||
case "RiskAssessment":
|
|
||||||
return "subject";
|
|
||||||
case "Schedule":
|
|
||||||
return "actor";
|
|
||||||
case "ServiceRequest":
|
|
||||||
return "patient";
|
|
||||||
case "Specimen":
|
|
||||||
return "subject";
|
|
||||||
case "SupplyDelivery":
|
|
||||||
return "patient";
|
|
||||||
case "SupplyRequest":
|
|
||||||
return "subject";
|
|
||||||
case "VisionPrescription":
|
|
||||||
return "patient";
|
|
||||||
}
|
|
||||||
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
|
||||||
|
|
@ -24,31 +24,23 @@ import ca.uhn.hapi.fhir.cdshooks.api.json.CdsServiceJson;
|
||||||
import ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrUtils;
|
import ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrUtils;
|
||||||
import org.hl7.fhir.instance.model.api.IBaseResource;
|
import org.hl7.fhir.instance.model.api.IBaseResource;
|
||||||
import org.hl7.fhir.instance.model.api.IIdType;
|
import org.hl7.fhir.instance.model.api.IIdType;
|
||||||
import org.hl7.fhir.r5.model.CanonicalType;
|
|
||||||
import org.hl7.fhir.r5.model.Coding;
|
import org.hl7.fhir.r5.model.Coding;
|
||||||
import org.hl7.fhir.r5.model.DataRequirement;
|
|
||||||
import org.hl7.fhir.r5.model.Library;
|
|
||||||
import org.hl7.fhir.r5.model.PlanDefinition;
|
import org.hl7.fhir.r5.model.PlanDefinition;
|
||||||
import org.hl7.fhir.r5.model.ValueSet;
|
import org.hl7.fhir.r5.model.TriggerDefinition;
|
||||||
import org.opencds.cqf.fhir.api.Repository;
|
import org.opencds.cqf.fhir.api.Repository;
|
||||||
import org.opencds.cqf.fhir.utility.r5.SearchHelper;
|
|
||||||
|
|
||||||
import java.util.ArrayList;
|
import java.util.stream.Collectors;
|
||||||
import java.util.List;
|
|
||||||
|
|
||||||
public class CrDiscoveryServiceR5 implements ICrDiscoveryService {
|
public class CrDiscoveryServiceR5 implements ICrDiscoveryService {
|
||||||
|
|
||||||
protected final String PATIENT_ID_CONTEXT = "{{context.patientId}}";
|
|
||||||
protected final int DEFAULT_MAX_URI_LENGTH = 8000;
|
|
||||||
protected int myMaxUriLength;
|
|
||||||
|
|
||||||
protected final Repository myRepository;
|
protected final Repository myRepository;
|
||||||
protected final IIdType myPlanDefinitionId;
|
protected final IIdType myPlanDefinitionId;
|
||||||
|
protected final PrefetchTemplateBuilderR5 myPrefetchTemplateBuilder;
|
||||||
|
|
||||||
public CrDiscoveryServiceR5(IIdType thePlanDefinitionId, Repository theRepository) {
|
public CrDiscoveryServiceR5(IIdType thePlanDefinitionId, Repository theRepository) {
|
||||||
myPlanDefinitionId = thePlanDefinitionId;
|
myPlanDefinitionId = thePlanDefinitionId;
|
||||||
myRepository = theRepository;
|
myRepository = theRepository;
|
||||||
myMaxUriLength = DEFAULT_MAX_URI_LENGTH;
|
myPrefetchTemplateBuilder = new PrefetchTemplateBuilderR5(myRepository);
|
||||||
}
|
}
|
||||||
|
|
||||||
public CdsServiceJson resolveService() {
|
public CdsServiceJson resolveService() {
|
||||||
|
|
@ -59,12 +51,36 @@ public class CrDiscoveryServiceR5 implements ICrDiscoveryService {
|
||||||
protected CdsServiceJson resolveService(IBaseResource thePlanDefinition) {
|
protected CdsServiceJson resolveService(IBaseResource thePlanDefinition) {
|
||||||
if (thePlanDefinition instanceof PlanDefinition) {
|
if (thePlanDefinition instanceof PlanDefinition) {
|
||||||
PlanDefinition planDef = (PlanDefinition) thePlanDefinition;
|
PlanDefinition planDef = (PlanDefinition) thePlanDefinition;
|
||||||
return new CrDiscoveryElementR5(planDef, getPrefetchUrlList(planDef)).getCdsServiceJson();
|
String triggerEvent = getTriggerEvent(planDef);
|
||||||
|
if (triggerEvent != null) {
|
||||||
|
PrefetchUrlList prefetchUrlList =
|
||||||
|
isEca(planDef) ? myPrefetchTemplateBuilder.getPrefetchUrlList(planDef) : new PrefetchUrlList();
|
||||||
|
return new CrDiscoveryElementR5(planDef, prefetchUrlList).getCdsServiceJson();
|
||||||
|
}
|
||||||
}
|
}
|
||||||
return null;
|
return null;
|
||||||
}
|
}
|
||||||
|
|
||||||
public boolean isEca(PlanDefinition thePlanDefinition) {
|
protected String getTriggerEvent(PlanDefinition thePlanDefinition) {
|
||||||
|
if (thePlanDefinition == null
|
||||||
|
|| !thePlanDefinition.hasAction()
|
||||||
|
|| thePlanDefinition.getAction().stream().noneMatch(a -> a.hasTrigger())) {
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
|
||||||
|
var triggerDefs = thePlanDefinition.getAction().stream()
|
||||||
|
.filter(a -> a.hasTrigger())
|
||||||
|
.flatMap(a -> a.getTrigger().stream())
|
||||||
|
.filter(t -> t.getType().equals(TriggerDefinition.TriggerType.NAMEDEVENT))
|
||||||
|
.collect(Collectors.toList());
|
||||||
|
if (triggerDefs == null || triggerDefs.isEmpty()) {
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
|
||||||
|
return triggerDefs.get(0).getName();
|
||||||
|
}
|
||||||
|
|
||||||
|
protected boolean isEca(PlanDefinition thePlanDefinition) {
|
||||||
if (thePlanDefinition.hasType() && thePlanDefinition.getType().hasCoding()) {
|
if (thePlanDefinition.hasType() && thePlanDefinition.getType().hasCoding()) {
|
||||||
for (Coding coding : thePlanDefinition.getType().getCoding()) {
|
for (Coding coding : thePlanDefinition.getType().getCoding()) {
|
||||||
if (coding.getCode().equals("eca-rule")) {
|
if (coding.getCode().equals("eca-rule")) {
|
||||||
|
|
@ -74,358 +90,4 @@ public class CrDiscoveryServiceR5 implements ICrDiscoveryService {
|
||||||
}
|
}
|
||||||
return false;
|
return false;
|
||||||
}
|
}
|
||||||
|
|
||||||
public Library resolvePrimaryLibrary(PlanDefinition thePlanDefinition) {
|
|
||||||
// The CPGComputablePlanDefinition profile limits the cardinality of library to 1
|
|
||||||
Library library = null;
|
|
||||||
if (thePlanDefinition.hasLibrary() && !thePlanDefinition.getLibrary().isEmpty()) {
|
|
||||||
library = (Library) SearchHelper.searchRepositoryByCanonical(
|
|
||||||
myRepository, thePlanDefinition.getLibrary().get(0));
|
|
||||||
}
|
|
||||||
return library;
|
|
||||||
}
|
|
||||||
|
|
||||||
public List<String> resolveValueCodingCodes(List<Coding> theValueCodings) {
|
|
||||||
List<String> result = new ArrayList<>();
|
|
||||||
|
|
||||||
StringBuilder codes = new StringBuilder();
|
|
||||||
for (Coding coding : theValueCodings) {
|
|
||||||
if (coding.hasCode()) {
|
|
||||||
String system = coding.getSystem();
|
|
||||||
String code = coding.getCode();
|
|
||||||
|
|
||||||
codes = getCodesStringBuilder(result, codes, system, code);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
result.add(codes.toString());
|
|
||||||
return result;
|
|
||||||
}
|
|
||||||
|
|
||||||
public List<String> resolveValueSetCodes(CanonicalType theValueSetId) {
|
|
||||||
ValueSet valueSet = (ValueSet) SearchHelper.searchRepositoryByCanonical(myRepository, theValueSetId);
|
|
||||||
List<String> result = new ArrayList<>();
|
|
||||||
StringBuilder codes = new StringBuilder();
|
|
||||||
if (valueSet.hasExpansion() && valueSet.getExpansion().hasContains()) {
|
|
||||||
for (ValueSet.ValueSetExpansionContainsComponent contains :
|
|
||||||
valueSet.getExpansion().getContains()) {
|
|
||||||
String system = contains.getSystem();
|
|
||||||
String code = contains.getCode();
|
|
||||||
|
|
||||||
codes = getCodesStringBuilder(result, codes, system, code);
|
|
||||||
}
|
|
||||||
} else if (valueSet.hasCompose() && valueSet.getCompose().hasInclude()) {
|
|
||||||
for (ValueSet.ConceptSetComponent concepts : valueSet.getCompose().getInclude()) {
|
|
||||||
String system = concepts.getSystem();
|
|
||||||
if (concepts.hasConcept()) {
|
|
||||||
for (ValueSet.ConceptReferenceComponent concept : concepts.getConcept()) {
|
|
||||||
String code = concept.getCode();
|
|
||||||
|
|
||||||
codes = getCodesStringBuilder(result, codes, system, code);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
result.add(codes.toString());
|
|
||||||
return result;
|
|
||||||
}
|
|
||||||
|
|
||||||
protected StringBuilder getCodesStringBuilder(
|
|
||||||
List<String> theList, StringBuilder theCodes, String theSystem, String theCode) {
|
|
||||||
String codeToken = theSystem + "|" + theCode;
|
|
||||||
int postAppendLength = theCodes.length() + codeToken.length();
|
|
||||||
|
|
||||||
if (theCodes.length() > 0 && postAppendLength < myMaxUriLength) {
|
|
||||||
theCodes.append(",");
|
|
||||||
} else if (postAppendLength > myMaxUriLength) {
|
|
||||||
theList.add(theCodes.toString());
|
|
||||||
theCodes = new StringBuilder();
|
|
||||||
}
|
|
||||||
theCodes.append(codeToken);
|
|
||||||
return theCodes;
|
|
||||||
}
|
|
||||||
|
|
||||||
public List<String> createRequestUrl(DataRequirement theDataRequirement) {
|
|
||||||
if (!isPatientCompartment(theDataRequirement.getType().toCode())) return null;
|
|
||||||
String patientRelatedResource = theDataRequirement.getType() + "?"
|
|
||||||
+ getPatientSearchParam(theDataRequirement.getType().toCode())
|
|
||||||
+ "=Patient/" + PATIENT_ID_CONTEXT;
|
|
||||||
List<String> ret = new ArrayList<>();
|
|
||||||
if (theDataRequirement.hasCodeFilter()) {
|
|
||||||
for (DataRequirement.DataRequirementCodeFilterComponent codeFilterComponent :
|
|
||||||
theDataRequirement.getCodeFilter()) {
|
|
||||||
if (!codeFilterComponent.hasPath()) continue;
|
|
||||||
String path =
|
|
||||||
mapCodePathToSearchParam(theDataRequirement.getType().toCode(), codeFilterComponent.getPath());
|
|
||||||
if (codeFilterComponent.hasValueSetElement()) {
|
|
||||||
for (String codes : resolveValueSetCodes(codeFilterComponent.getValueSetElement())) {
|
|
||||||
ret.add(patientRelatedResource + "&" + path + "=" + codes);
|
|
||||||
}
|
|
||||||
} else if (codeFilterComponent.hasCode()) {
|
|
||||||
List<Coding> codeFilterValueCodings = codeFilterComponent.getCode();
|
|
||||||
boolean isFirstCodingInFilter = true;
|
|
||||||
for (String code : resolveValueCodingCodes(codeFilterValueCodings)) {
|
|
||||||
if (isFirstCodingInFilter) {
|
|
||||||
ret.add(patientRelatedResource + "&" + path + "=" + code);
|
|
||||||
} else {
|
|
||||||
ret.add("," + code);
|
|
||||||
}
|
|
||||||
|
|
||||||
isFirstCodingInFilter = false;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return ret;
|
|
||||||
} else {
|
|
||||||
ret.add(patientRelatedResource);
|
|
||||||
return ret;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
public PrefetchUrlList getPrefetchUrlList(PlanDefinition thePlanDefinition) {
|
|
||||||
PrefetchUrlList prefetchList = new PrefetchUrlList();
|
|
||||||
if (thePlanDefinition == null) return null;
|
|
||||||
if (!isEca(thePlanDefinition)) return null;
|
|
||||||
Library library = resolvePrimaryLibrary(thePlanDefinition);
|
|
||||||
// TODO: resolve data requirements
|
|
||||||
if (library == null || !library.hasDataRequirement()) return null;
|
|
||||||
for (DataRequirement dataRequirement : library.getDataRequirement()) {
|
|
||||||
List<String> requestUrls = createRequestUrl(dataRequirement);
|
|
||||||
if (requestUrls != null) {
|
|
||||||
prefetchList.addAll(requestUrls);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return prefetchList;
|
|
||||||
}
|
|
||||||
|
|
||||||
protected String mapCodePathToSearchParam(String theDataType, String thePath) {
|
|
||||||
switch (theDataType) {
|
|
||||||
case "MedicationAdministration":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
case "MedicationDispense":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
case "MedicationRequest":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
case "MedicationStatement":
|
|
||||||
if (thePath.equals("medication")) return "code";
|
|
||||||
break;
|
|
||||||
default:
|
|
||||||
if (thePath.equals("vaccineCode")) return "vaccine-code";
|
|
||||||
break;
|
|
||||||
}
|
|
||||||
return thePath.replace('.', '-').toLowerCase();
|
|
||||||
}
|
|
||||||
|
|
||||||
public static boolean isPatientCompartment(String theDataType) {
|
|
||||||
if (theDataType == null) {
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
switch (theDataType) {
|
|
||||||
case "Account":
|
|
||||||
case "AdverseEvent":
|
|
||||||
case "AllergyIntolerance":
|
|
||||||
case "Appointment":
|
|
||||||
case "AppointmentResponse":
|
|
||||||
case "AuditEvent":
|
|
||||||
case "Basic":
|
|
||||||
case "BodyStructure":
|
|
||||||
case "CarePlan":
|
|
||||||
case "CareTeam":
|
|
||||||
case "ChargeItem":
|
|
||||||
case "Claim":
|
|
||||||
case "ClaimResponse":
|
|
||||||
case "ClinicalImpression":
|
|
||||||
case "Communication":
|
|
||||||
case "CommunicationRequest":
|
|
||||||
case "Composition":
|
|
||||||
case "Condition":
|
|
||||||
case "Consent":
|
|
||||||
case "Coverage":
|
|
||||||
case "CoverageEligibilityRequest":
|
|
||||||
case "CoverageEligibilityResponse":
|
|
||||||
case "DetectedIssue":
|
|
||||||
case "DeviceRequest":
|
|
||||||
case "DeviceUseStatement":
|
|
||||||
case "DiagnosticReport":
|
|
||||||
case "DocumentManifest":
|
|
||||||
case "DocumentReference":
|
|
||||||
case "Encounter":
|
|
||||||
case "EnrollmentRequest":
|
|
||||||
case "EpisodeOfCare":
|
|
||||||
case "ExplanationOfBenefit":
|
|
||||||
case "FamilyMemberHistory":
|
|
||||||
case "Flag":
|
|
||||||
case "Goal":
|
|
||||||
case "Group":
|
|
||||||
case "ImagingStudy":
|
|
||||||
case "Immunization":
|
|
||||||
case "ImmunizationEvaluation":
|
|
||||||
case "ImmunizationRecommendation":
|
|
||||||
case "Invoice":
|
|
||||||
case "List":
|
|
||||||
case "MeasureReport":
|
|
||||||
case "Media":
|
|
||||||
case "MedicationAdministration":
|
|
||||||
case "MedicationDispense":
|
|
||||||
case "MedicationRequest":
|
|
||||||
case "MedicationStatement":
|
|
||||||
case "MolecularSequence":
|
|
||||||
case "NutritionOrder":
|
|
||||||
case "Observation":
|
|
||||||
case "Patient":
|
|
||||||
case "Person":
|
|
||||||
case "Procedure":
|
|
||||||
case "Provenance":
|
|
||||||
case "QuestionnaireResponse":
|
|
||||||
case "RelatedPerson":
|
|
||||||
case "RequestGroup":
|
|
||||||
case "ResearchSubject":
|
|
||||||
case "RiskAssessment":
|
|
||||||
case "Schedule":
|
|
||||||
case "ServiceRequest":
|
|
||||||
case "Specimen":
|
|
||||||
case "SupplyDelivery":
|
|
||||||
case "SupplyRequest":
|
|
||||||
case "VisionPrescription":
|
|
||||||
return true;
|
|
||||||
default:
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
public String getPatientSearchParam(String theDataType) {
|
|
||||||
switch (theDataType) {
|
|
||||||
case "Account":
|
|
||||||
return "subject";
|
|
||||||
case "AdverseEvent":
|
|
||||||
return "subject";
|
|
||||||
case "AllergyIntolerance":
|
|
||||||
return "patient";
|
|
||||||
case "Appointment":
|
|
||||||
return "actor";
|
|
||||||
case "AppointmentResponse":
|
|
||||||
return "actor";
|
|
||||||
case "AuditEvent":
|
|
||||||
return "patient";
|
|
||||||
case "Basic":
|
|
||||||
return "patient";
|
|
||||||
case "BodyStructure":
|
|
||||||
return "patient";
|
|
||||||
case "CarePlan":
|
|
||||||
return "patient";
|
|
||||||
case "CareTeam":
|
|
||||||
return "patient";
|
|
||||||
case "ChargeItem":
|
|
||||||
return "subject";
|
|
||||||
case "Claim":
|
|
||||||
return "patient";
|
|
||||||
case "ClaimResponse":
|
|
||||||
return "patient";
|
|
||||||
case "ClinicalImpression":
|
|
||||||
return "subject";
|
|
||||||
case "Communication":
|
|
||||||
return "subject";
|
|
||||||
case "CommunicationRequest":
|
|
||||||
return "subject";
|
|
||||||
case "Composition":
|
|
||||||
return "subject";
|
|
||||||
case "Condition":
|
|
||||||
return "patient";
|
|
||||||
case "Consent":
|
|
||||||
return "patient";
|
|
||||||
case "Coverage":
|
|
||||||
return "policy-holder";
|
|
||||||
case "DetectedIssue":
|
|
||||||
return "patient";
|
|
||||||
case "DeviceRequest":
|
|
||||||
return "subject";
|
|
||||||
case "DeviceUseStatement":
|
|
||||||
return "subject";
|
|
||||||
case "DiagnosticReport":
|
|
||||||
return "subject";
|
|
||||||
case "DocumentManifest":
|
|
||||||
return "subject";
|
|
||||||
case "DocumentReference":
|
|
||||||
return "subject";
|
|
||||||
case "Encounter":
|
|
||||||
return "patient";
|
|
||||||
case "EnrollmentRequest":
|
|
||||||
return "subject";
|
|
||||||
case "EpisodeOfCare":
|
|
||||||
return "patient";
|
|
||||||
case "ExplanationOfBenefit":
|
|
||||||
return "patient";
|
|
||||||
case "FamilyMemberHistory":
|
|
||||||
return "patient";
|
|
||||||
case "Flag":
|
|
||||||
return "patient";
|
|
||||||
case "Goal":
|
|
||||||
return "patient";
|
|
||||||
case "Group":
|
|
||||||
return "member";
|
|
||||||
case "ImagingStudy":
|
|
||||||
return "patient";
|
|
||||||
case "Immunization":
|
|
||||||
return "patient";
|
|
||||||
case "ImmunizationRecommendation":
|
|
||||||
return "patient";
|
|
||||||
case "Invoice":
|
|
||||||
return "subject";
|
|
||||||
case "List":
|
|
||||||
return "subject";
|
|
||||||
case "MeasureReport":
|
|
||||||
return "patient";
|
|
||||||
case "Media":
|
|
||||||
return "subject";
|
|
||||||
case "MedicationAdministration":
|
|
||||||
return "patient";
|
|
||||||
case "MedicationDispense":
|
|
||||||
return "patient";
|
|
||||||
case "MedicationRequest":
|
|
||||||
return "subject";
|
|
||||||
case "MedicationStatement":
|
|
||||||
return "subject";
|
|
||||||
case "MolecularSequence":
|
|
||||||
return "patient";
|
|
||||||
case "NutritionOrder":
|
|
||||||
return "patient";
|
|
||||||
case "Observation":
|
|
||||||
return "subject";
|
|
||||||
case "Patient":
|
|
||||||
return "_id";
|
|
||||||
case "Person":
|
|
||||||
return "patient";
|
|
||||||
case "Procedure":
|
|
||||||
return "patient";
|
|
||||||
case "Provenance":
|
|
||||||
return "patient";
|
|
||||||
case "QuestionnaireResponse":
|
|
||||||
return "subject";
|
|
||||||
case "RelatedPerson":
|
|
||||||
return "patient";
|
|
||||||
case "RequestGroup":
|
|
||||||
return "subject";
|
|
||||||
case "ResearchSubject":
|
|
||||||
return "individual";
|
|
||||||
case "RiskAssessment":
|
|
||||||
return "subject";
|
|
||||||
case "Schedule":
|
|
||||||
return "actor";
|
|
||||||
case "ServiceRequest":
|
|
||||||
return "patient";
|
|
||||||
case "Specimen":
|
|
||||||
return "subject";
|
|
||||||
case "SupplyDelivery":
|
|
||||||
return "patient";
|
|
||||||
case "SupplyRequest":
|
|
||||||
return "subject";
|
|
||||||
case "VisionPrescription":
|
|
||||||
return "patient";
|
|
||||||
}
|
|
||||||
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
}
|
}
|
||||||
|
|
|
||||||
|
|
@ -0,0 +1,434 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - CDS Hooks
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
|
package ca.uhn.hapi.fhir.cdshooks.svc.cr.discovery;
|
||||||
|
|
||||||
|
import org.hl7.fhir.dstu3.model.Coding;
|
||||||
|
import org.hl7.fhir.dstu3.model.DataRequirement;
|
||||||
|
import org.hl7.fhir.dstu3.model.Extension;
|
||||||
|
import org.hl7.fhir.dstu3.model.Library;
|
||||||
|
import org.hl7.fhir.dstu3.model.PlanDefinition;
|
||||||
|
import org.hl7.fhir.dstu3.model.StringType;
|
||||||
|
import org.hl7.fhir.dstu3.model.ValueSet;
|
||||||
|
import org.opencds.cqf.fhir.api.Repository;
|
||||||
|
import org.opencds.cqf.fhir.utility.dstu3.SearchHelper;
|
||||||
|
|
||||||
|
import java.util.ArrayList;
|
||||||
|
import java.util.List;
|
||||||
|
import java.util.stream.Collectors;
|
||||||
|
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CQF_FHIR_QUERY_PATTERN;
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CRMI_EFFECTIVE_DATA_REQUIREMENTS;
|
||||||
|
|
||||||
|
public class PrefetchTemplateBuilderDstu3 extends BasePrefetchTemplateBuilder {
|
||||||
|
|
||||||
|
public PrefetchTemplateBuilderDstu3(Repository theRepository) {
|
||||||
|
super(theRepository);
|
||||||
|
}
|
||||||
|
|
||||||
|
public PrefetchUrlList getPrefetchUrlList(PlanDefinition thePlanDefinition) {
|
||||||
|
PrefetchUrlList prefetchList = new PrefetchUrlList();
|
||||||
|
if (thePlanDefinition == null) return null;
|
||||||
|
Library library = resolvePrimaryLibrary(thePlanDefinition);
|
||||||
|
// TODO: resolve data requirements
|
||||||
|
if (!library.hasDataRequirement()) return null;
|
||||||
|
for (DataRequirement dataRequirement : library.getDataRequirement()) {
|
||||||
|
List<String> requestUrls = createRequestUrl(dataRequirement);
|
||||||
|
if (requestUrls != null) {
|
||||||
|
prefetchList.addAll(requestUrls);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
return prefetchList;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected Library resolvePrimaryLibrary(PlanDefinition thePlanDefinition) {
|
||||||
|
Library library = null;
|
||||||
|
Extension dataReqExt = thePlanDefinition.getExtensionByUrl(CRMI_EFFECTIVE_DATA_REQUIREMENTS);
|
||||||
|
// Use a Module Definition Library with Effective Data Requirements for the Plan Definition if it exists
|
||||||
|
if (dataReqExt != null && dataReqExt.hasValue()) {
|
||||||
|
StringType moduleDefCanonical = (StringType) dataReqExt.getValue();
|
||||||
|
library = (Library) SearchHelper.searchRepositoryByCanonical(myRepository, moduleDefCanonical);
|
||||||
|
}
|
||||||
|
// Otherwise use the primary Library
|
||||||
|
if (library == null && thePlanDefinition.hasLibrary()) {
|
||||||
|
// The CPGComputablePlanDefinition profile limits the cardinality of library to 1
|
||||||
|
StringType canonical =
|
||||||
|
new StringType(thePlanDefinition.getLibrary().get(0).getReference());
|
||||||
|
library = (Library) SearchHelper.searchRepositoryByCanonical(myRepository, canonical);
|
||||||
|
}
|
||||||
|
return library;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> createRequestUrl(DataRequirement theDataRequirement) {
|
||||||
|
List<String> urlList = new ArrayList<>();
|
||||||
|
// if we have a fhirQueryPattern extensions, use them
|
||||||
|
List<Extension> fhirQueryExtList = theDataRequirement.getExtension().stream()
|
||||||
|
.filter(e -> e.getUrl().equals(CQF_FHIR_QUERY_PATTERN) && e.hasValue())
|
||||||
|
.collect(Collectors.toList());
|
||||||
|
if (fhirQueryExtList != null && !fhirQueryExtList.isEmpty()) {
|
||||||
|
for (Extension fhirQueryExt : fhirQueryExtList) {
|
||||||
|
urlList.add(fhirQueryExt.getValueAsPrimitive().getValueAsString());
|
||||||
|
}
|
||||||
|
return urlList;
|
||||||
|
}
|
||||||
|
|
||||||
|
// else build the query
|
||||||
|
if (!isPatientCompartment(theDataRequirement.getType())) return null;
|
||||||
|
String baseQuery = theDataRequirement.getType() + "?"
|
||||||
|
+ getPatientSearchParam(theDataRequirement.getType())
|
||||||
|
+ "=Patient/" + PATIENT_ID_CONTEXT;
|
||||||
|
|
||||||
|
// TODO: Add valueFilter extension resolution
|
||||||
|
|
||||||
|
if (theDataRequirement.hasCodeFilter()) {
|
||||||
|
resolveCodeFilter(theDataRequirement, urlList, baseQuery);
|
||||||
|
} else {
|
||||||
|
urlList.add(baseQuery);
|
||||||
|
}
|
||||||
|
return urlList;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected void resolveCodeFilter(DataRequirement theDataRequirement, List<String> theUrlList, String theBaseQuery) {
|
||||||
|
for (DataRequirement.DataRequirementCodeFilterComponent codeFilterComponent :
|
||||||
|
theDataRequirement.getCodeFilter()) {
|
||||||
|
if (!codeFilterComponent.hasPath()) continue;
|
||||||
|
String path = mapCodePathToSearchParam(theDataRequirement.getType(), codeFilterComponent.getPath());
|
||||||
|
|
||||||
|
StringType codeFilterComponentString = null;
|
||||||
|
if (codeFilterComponent.hasValueSetStringType()) {
|
||||||
|
codeFilterComponentString = codeFilterComponent.getValueSetStringType();
|
||||||
|
} else if (codeFilterComponent.hasValueSetReference()) {
|
||||||
|
codeFilterComponentString = new StringType(
|
||||||
|
codeFilterComponent.getValueSetReference().getReference());
|
||||||
|
} else if (codeFilterComponent.hasValueCoding()) {
|
||||||
|
List<Coding> codeFilterValueCodings = codeFilterComponent.getValueCoding();
|
||||||
|
boolean isFirstCodingInFilter = true;
|
||||||
|
for (String code : resolveValueCodingCodes(codeFilterValueCodings)) {
|
||||||
|
if (isFirstCodingInFilter) {
|
||||||
|
theUrlList.add(theBaseQuery + "&" + path + "=" + code);
|
||||||
|
} else {
|
||||||
|
theUrlList.add("," + code);
|
||||||
|
}
|
||||||
|
|
||||||
|
isFirstCodingInFilter = false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
if (codeFilterComponentString != null) {
|
||||||
|
for (String codes : resolveValueSetCodes(codeFilterComponentString)) {
|
||||||
|
theUrlList.add(theBaseQuery + "&" + path + "=" + codes);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> resolveValueCodingCodes(List<Coding> theValueCodings) {
|
||||||
|
List<String> result = new ArrayList<>();
|
||||||
|
|
||||||
|
StringBuilder codes = new StringBuilder();
|
||||||
|
for (Coding coding : theValueCodings) {
|
||||||
|
if (coding.hasCode()) {
|
||||||
|
String system = coding.getSystem();
|
||||||
|
String code = coding.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
result.add(codes.toString());
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> resolveValueSetCodes(StringType theValueSetId) {
|
||||||
|
ValueSet valueSet = (ValueSet) SearchHelper.searchRepositoryByCanonical(myRepository, theValueSetId);
|
||||||
|
List<String> result = new ArrayList<>();
|
||||||
|
StringBuilder codes = new StringBuilder();
|
||||||
|
if (valueSet.hasExpansion() && valueSet.getExpansion().hasContains()) {
|
||||||
|
for (ValueSet.ValueSetExpansionContainsComponent contains :
|
||||||
|
valueSet.getExpansion().getContains()) {
|
||||||
|
String system = contains.getSystem();
|
||||||
|
String code = contains.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
} else if (valueSet.hasCompose() && valueSet.getCompose().hasInclude()) {
|
||||||
|
for (ValueSet.ConceptSetComponent concepts : valueSet.getCompose().getInclude()) {
|
||||||
|
String system = concepts.getSystem();
|
||||||
|
if (concepts.hasConcept()) {
|
||||||
|
for (ValueSet.ConceptReferenceComponent concept : concepts.getConcept()) {
|
||||||
|
String code = concept.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
result.add(codes.toString());
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected StringBuilder getCodesStringBuilder(
|
||||||
|
List<String> theList, StringBuilder theCodes, String theSystem, String theCode) {
|
||||||
|
String codeToken = theSystem + "|" + theCode;
|
||||||
|
int postAppendLength = theCodes.length() + codeToken.length();
|
||||||
|
|
||||||
|
if (theCodes.length() > 0 && postAppendLength < myMaxUriLength) {
|
||||||
|
theCodes.append(",");
|
||||||
|
} else if (postAppendLength > myMaxUriLength) {
|
||||||
|
theList.add(theCodes.toString());
|
||||||
|
theCodes = new StringBuilder();
|
||||||
|
}
|
||||||
|
theCodes.append(codeToken);
|
||||||
|
return theCodes;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected String mapCodePathToSearchParam(String theDataType, String thePath) {
|
||||||
|
switch (theDataType) {
|
||||||
|
case "MedicationAdministration":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "MedicationDispense":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "MedicationRequest":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "MedicationStatement":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "ProcedureRequest":
|
||||||
|
if (thePath.equals("bodySite")) return "body-site";
|
||||||
|
break;
|
||||||
|
default:
|
||||||
|
if (thePath.equals("vaccineCode")) return "vaccine-code";
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
return thePath.replace('.', '-').toLowerCase();
|
||||||
|
}
|
||||||
|
|
||||||
|
protected static boolean isPatientCompartment(String theDataType) {
|
||||||
|
if (theDataType == null) {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
switch (theDataType) {
|
||||||
|
case "Account":
|
||||||
|
case "AdverseEvent":
|
||||||
|
case "AllergyIntolerance":
|
||||||
|
case "Appointment":
|
||||||
|
case "AppointmentResponse":
|
||||||
|
case "AuditEvent":
|
||||||
|
case "Basic":
|
||||||
|
case "BodySite":
|
||||||
|
case "CarePlan":
|
||||||
|
case "CareTeam":
|
||||||
|
case "ChargeItem":
|
||||||
|
case "Claim":
|
||||||
|
case "ClaimResponse":
|
||||||
|
case "ClinicalImpression":
|
||||||
|
case "Communication":
|
||||||
|
case "CommunicationRequest":
|
||||||
|
case "Composition":
|
||||||
|
case "Condition":
|
||||||
|
case "Consent":
|
||||||
|
case "Coverage":
|
||||||
|
case "DetectedIssue":
|
||||||
|
case "DeviceRequest":
|
||||||
|
case "DeviceUseStatement":
|
||||||
|
case "DiagnosticReport":
|
||||||
|
case "DocumentManifest":
|
||||||
|
case "EligibilityRequest":
|
||||||
|
case "Encounter":
|
||||||
|
case "EnrollmentRequest":
|
||||||
|
case "EpisodeOfCare":
|
||||||
|
case "ExplanationOfBenefit":
|
||||||
|
case "FamilyMemberHistory":
|
||||||
|
case "Flag":
|
||||||
|
case "Goal":
|
||||||
|
case "Group":
|
||||||
|
case "ImagingManifest":
|
||||||
|
case "ImagingStudy":
|
||||||
|
case "Immunization":
|
||||||
|
case "ImmunizationRecommendation":
|
||||||
|
case "List":
|
||||||
|
case "MeasureReport":
|
||||||
|
case "Media":
|
||||||
|
case "MedicationAdministration":
|
||||||
|
case "MedicationDispense":
|
||||||
|
case "MedicationRequest":
|
||||||
|
case "MedicationStatement":
|
||||||
|
case "NutritionOrder":
|
||||||
|
case "Observation":
|
||||||
|
case "Patient":
|
||||||
|
case "Person":
|
||||||
|
case "Procedure":
|
||||||
|
case "ProcedureRequest":
|
||||||
|
case "Provenance":
|
||||||
|
case "QuestionnaireResponse":
|
||||||
|
case "ReferralRequest":
|
||||||
|
case "RelatedPerson":
|
||||||
|
case "RequestGroup":
|
||||||
|
case "ResearchSubject":
|
||||||
|
case "RiskAssessment":
|
||||||
|
case "Schedule":
|
||||||
|
case "Specimen":
|
||||||
|
case "SupplyDelivery":
|
||||||
|
case "SupplyRequest":
|
||||||
|
case "VisionPrescription":
|
||||||
|
return true;
|
||||||
|
default:
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
protected String getPatientSearchParam(String theDataType) {
|
||||||
|
switch (theDataType) {
|
||||||
|
case "Account":
|
||||||
|
return "subject";
|
||||||
|
case "AdverseEvent":
|
||||||
|
return "subject";
|
||||||
|
case "AllergyIntolerance":
|
||||||
|
return "patient";
|
||||||
|
case "Appointment":
|
||||||
|
return "actor";
|
||||||
|
case "AppointmentResponse":
|
||||||
|
return "actor";
|
||||||
|
case "AuditEvent":
|
||||||
|
return "patient";
|
||||||
|
case "Basic":
|
||||||
|
return "patient";
|
||||||
|
case "BodySite":
|
||||||
|
return "patient";
|
||||||
|
case "CarePlan":
|
||||||
|
return "patient";
|
||||||
|
case "CareTeam":
|
||||||
|
return "patient";
|
||||||
|
case "ChargeItem":
|
||||||
|
return "subject";
|
||||||
|
case "Claim":
|
||||||
|
return "patient";
|
||||||
|
case "ClaimResponse":
|
||||||
|
return "patient";
|
||||||
|
case "ClinicalImpression":
|
||||||
|
return "subject";
|
||||||
|
case "Communication":
|
||||||
|
return "subject";
|
||||||
|
case "CommunicationRequest":
|
||||||
|
return "subject";
|
||||||
|
case "Composition":
|
||||||
|
return "subject";
|
||||||
|
case "Condition":
|
||||||
|
return "patient";
|
||||||
|
case "Consent":
|
||||||
|
return "patient";
|
||||||
|
case "Coverage":
|
||||||
|
return "beneficiary";
|
||||||
|
case "DetectedIssue":
|
||||||
|
return "patient";
|
||||||
|
case "DeviceRequest":
|
||||||
|
return "subject";
|
||||||
|
case "DeviceUseStatement":
|
||||||
|
return "subject";
|
||||||
|
case "DiagnosticReport":
|
||||||
|
return "subject";
|
||||||
|
case "DocumentManifest":
|
||||||
|
return "subject";
|
||||||
|
case "DocumentReference":
|
||||||
|
return "subject";
|
||||||
|
case "EligibilityRequest":
|
||||||
|
return "patient";
|
||||||
|
case "Encounter":
|
||||||
|
return "patient";
|
||||||
|
case "EnrollmentRequest":
|
||||||
|
return "subject";
|
||||||
|
case "EpisodeOfCare":
|
||||||
|
return "patient";
|
||||||
|
case "ExplanationOfBenefit":
|
||||||
|
return "patient";
|
||||||
|
case "FamilyMemberHistory":
|
||||||
|
return "patient";
|
||||||
|
case "Flag":
|
||||||
|
return "patient";
|
||||||
|
case "Goal":
|
||||||
|
return "patient";
|
||||||
|
case "Group":
|
||||||
|
return "member";
|
||||||
|
case "ImagingManifest":
|
||||||
|
return "patient";
|
||||||
|
case "ImagingStudy":
|
||||||
|
return "patient";
|
||||||
|
case "Immunization":
|
||||||
|
return "patient";
|
||||||
|
case "ImmunizationRecommendation":
|
||||||
|
return "patient";
|
||||||
|
case "List":
|
||||||
|
return "subject";
|
||||||
|
case "MeasureReport":
|
||||||
|
return "patient";
|
||||||
|
case "Media":
|
||||||
|
return "subject";
|
||||||
|
case "MedicationAdministration":
|
||||||
|
return "patient";
|
||||||
|
case "MedicationDispense":
|
||||||
|
return "patient";
|
||||||
|
case "MedicationRequest":
|
||||||
|
return "subject";
|
||||||
|
case "MedicationStatement":
|
||||||
|
return "subject";
|
||||||
|
case "NutritionOrder":
|
||||||
|
return "patient";
|
||||||
|
case "Observation":
|
||||||
|
return "subject";
|
||||||
|
case "Patient":
|
||||||
|
return "_id";
|
||||||
|
case "Person":
|
||||||
|
return "patient";
|
||||||
|
case "Procedure":
|
||||||
|
return "patient";
|
||||||
|
case "ProcedureRequest":
|
||||||
|
return "patient";
|
||||||
|
case "Provenance":
|
||||||
|
return "patient";
|
||||||
|
case "QuestionnaireResponse":
|
||||||
|
return "subject";
|
||||||
|
case "ReferralRequest":
|
||||||
|
return "patient";
|
||||||
|
case "RelatedPerson":
|
||||||
|
return "patient";
|
||||||
|
case "RequestGroup":
|
||||||
|
return "subject";
|
||||||
|
case "ResearchSubject":
|
||||||
|
return "individual";
|
||||||
|
case "RiskAssessment":
|
||||||
|
return "subject";
|
||||||
|
case "Schedule":
|
||||||
|
return "actor";
|
||||||
|
case "Specimen":
|
||||||
|
return "subject";
|
||||||
|
case "SupplyDelivery":
|
||||||
|
return "patient";
|
||||||
|
case "SupplyRequest":
|
||||||
|
return "subject";
|
||||||
|
case "VisionPrescription":
|
||||||
|
return "patient";
|
||||||
|
}
|
||||||
|
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
@ -0,0 +1,413 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - CDS Hooks
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
|
package ca.uhn.hapi.fhir.cdshooks.svc.cr.discovery;
|
||||||
|
|
||||||
|
import org.hl7.fhir.r4.model.CanonicalType;
|
||||||
|
import org.hl7.fhir.r4.model.Coding;
|
||||||
|
import org.hl7.fhir.r4.model.DataRequirement;
|
||||||
|
import org.hl7.fhir.r4.model.Extension;
|
||||||
|
import org.hl7.fhir.r4.model.Library;
|
||||||
|
import org.hl7.fhir.r4.model.PlanDefinition;
|
||||||
|
import org.hl7.fhir.r4.model.ValueSet;
|
||||||
|
import org.opencds.cqf.fhir.api.Repository;
|
||||||
|
import org.opencds.cqf.fhir.utility.SearchHelper;
|
||||||
|
|
||||||
|
import java.util.ArrayList;
|
||||||
|
import java.util.List;
|
||||||
|
import java.util.stream.Collectors;
|
||||||
|
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CQF_FHIR_QUERY_PATTERN;
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CRMI_EFFECTIVE_DATA_REQUIREMENTS;
|
||||||
|
|
||||||
|
public class PrefetchTemplateBuilderR4 extends BasePrefetchTemplateBuilder {
|
||||||
|
|
||||||
|
public PrefetchTemplateBuilderR4(Repository theRepository) {
|
||||||
|
super(theRepository);
|
||||||
|
}
|
||||||
|
|
||||||
|
public PrefetchUrlList getPrefetchUrlList(PlanDefinition thePlanDefinition) {
|
||||||
|
if (thePlanDefinition == null) return null;
|
||||||
|
PrefetchUrlList prefetchList = new PrefetchUrlList();
|
||||||
|
Library library = resolvePrimaryLibrary(thePlanDefinition);
|
||||||
|
if (library == null || !library.hasDataRequirement()) return null;
|
||||||
|
for (DataRequirement dataRequirement : library.getDataRequirement()) {
|
||||||
|
List<String> requestUrls = createRequestUrl(dataRequirement);
|
||||||
|
if (requestUrls != null) {
|
||||||
|
prefetchList.addAll(requestUrls);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
return prefetchList;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected Library resolvePrimaryLibrary(PlanDefinition thePlanDefinition) {
|
||||||
|
Library library = null;
|
||||||
|
Extension dataReqExt = thePlanDefinition.getExtensionByUrl(CRMI_EFFECTIVE_DATA_REQUIREMENTS);
|
||||||
|
// Use a Module Definition Library with Effective Data Requirements for the Plan Definition if it exists
|
||||||
|
if (dataReqExt != null && dataReqExt.hasValue()) {
|
||||||
|
CanonicalType moduleDefCanonical = (CanonicalType) dataReqExt.getValue();
|
||||||
|
library = (Library) SearchHelper.searchRepositoryByCanonical(myRepository, moduleDefCanonical);
|
||||||
|
}
|
||||||
|
// Otherwise use the primary Library
|
||||||
|
if (library == null && thePlanDefinition.hasLibrary()) {
|
||||||
|
// The CPGComputablePlanDefinition profile limits the cardinality of library to 1
|
||||||
|
library = (Library) SearchHelper.searchRepositoryByCanonical(
|
||||||
|
myRepository, thePlanDefinition.getLibrary().get(0));
|
||||||
|
}
|
||||||
|
return library;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> createRequestUrl(DataRequirement theDataRequirement) {
|
||||||
|
List<String> urlList = new ArrayList<>();
|
||||||
|
// if we have a fhirQueryPattern extensions, use them
|
||||||
|
List<Extension> fhirQueryExtList = theDataRequirement.getExtension().stream()
|
||||||
|
.filter(e -> e.getUrl().equals(CQF_FHIR_QUERY_PATTERN) && e.hasValue())
|
||||||
|
.collect(Collectors.toList());
|
||||||
|
if (fhirQueryExtList != null && !fhirQueryExtList.isEmpty()) {
|
||||||
|
for (Extension fhirQueryExt : fhirQueryExtList) {
|
||||||
|
urlList.add(fhirQueryExt.getValueAsPrimitive().getValueAsString());
|
||||||
|
}
|
||||||
|
return urlList;
|
||||||
|
}
|
||||||
|
|
||||||
|
// else build the query
|
||||||
|
if (!isPatientCompartment(theDataRequirement.getType())) return null;
|
||||||
|
String baseQuery = theDataRequirement.getType() + "?"
|
||||||
|
+ getPatientSearchParam(theDataRequirement.getType())
|
||||||
|
+ "=Patient/" + PATIENT_ID_CONTEXT;
|
||||||
|
|
||||||
|
// TODO: Add valueFilter extension resolution
|
||||||
|
|
||||||
|
if (theDataRequirement.hasCodeFilter()) {
|
||||||
|
resolveCodeFilter(theDataRequirement, urlList, baseQuery);
|
||||||
|
} else {
|
||||||
|
urlList.add(baseQuery);
|
||||||
|
}
|
||||||
|
return urlList;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected void resolveCodeFilter(DataRequirement theDataRequirement, List<String> theUrlList, String theBaseQuery) {
|
||||||
|
for (DataRequirement.DataRequirementCodeFilterComponent codeFilterComponent :
|
||||||
|
theDataRequirement.getCodeFilter()) {
|
||||||
|
if (!codeFilterComponent.hasPath()) continue;
|
||||||
|
String path = mapCodePathToSearchParam(theDataRequirement.getType(), codeFilterComponent.getPath());
|
||||||
|
if (codeFilterComponent.hasValueSetElement()) {
|
||||||
|
for (String codes : resolveValueSetCodes(codeFilterComponent.getValueSetElement())) {
|
||||||
|
theUrlList.add(theBaseQuery + "&" + path + "=" + codes);
|
||||||
|
}
|
||||||
|
} else if (codeFilterComponent.hasCode()) {
|
||||||
|
List<Coding> codeFilterValueCodings = codeFilterComponent.getCode();
|
||||||
|
boolean isFirstCodingInFilter = true;
|
||||||
|
for (String code : resolveValueCodingCodes(codeFilterValueCodings)) {
|
||||||
|
if (isFirstCodingInFilter) {
|
||||||
|
theUrlList.add(theBaseQuery + "&" + path + "=" + code);
|
||||||
|
} else {
|
||||||
|
theUrlList.add("," + code);
|
||||||
|
}
|
||||||
|
|
||||||
|
isFirstCodingInFilter = false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> resolveValueCodingCodes(List<Coding> valueCodings) {
|
||||||
|
List<String> result = new ArrayList<>();
|
||||||
|
|
||||||
|
StringBuilder codes = new StringBuilder();
|
||||||
|
for (Coding coding : valueCodings) {
|
||||||
|
if (coding.hasCode()) {
|
||||||
|
String system = coding.getSystem();
|
||||||
|
String code = coding.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
result.add(codes.toString());
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> resolveValueSetCodes(CanonicalType valueSetId) {
|
||||||
|
ValueSet valueSet = (ValueSet) SearchHelper.searchRepositoryByCanonical(myRepository, valueSetId);
|
||||||
|
List<String> result = new ArrayList<>();
|
||||||
|
StringBuilder codes = new StringBuilder();
|
||||||
|
if (valueSet.hasExpansion() && valueSet.getExpansion().hasContains()) {
|
||||||
|
for (ValueSet.ValueSetExpansionContainsComponent contains :
|
||||||
|
valueSet.getExpansion().getContains()) {
|
||||||
|
String system = contains.getSystem();
|
||||||
|
String code = contains.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
} else if (valueSet.hasCompose() && valueSet.getCompose().hasInclude()) {
|
||||||
|
for (ValueSet.ConceptSetComponent concepts : valueSet.getCompose().getInclude()) {
|
||||||
|
String system = concepts.getSystem();
|
||||||
|
if (concepts.hasConcept()) {
|
||||||
|
for (ValueSet.ConceptReferenceComponent concept : concepts.getConcept()) {
|
||||||
|
String code = concept.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
result.add(codes.toString());
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected StringBuilder getCodesStringBuilder(List<String> ret, StringBuilder codes, String system, String code) {
|
||||||
|
String codeToken = system + "|" + code;
|
||||||
|
int postAppendLength = codes.length() + codeToken.length();
|
||||||
|
|
||||||
|
if (codes.length() > 0 && postAppendLength < myMaxUriLength) {
|
||||||
|
codes.append(",");
|
||||||
|
} else if (postAppendLength > myMaxUriLength) {
|
||||||
|
ret.add(codes.toString());
|
||||||
|
codes = new StringBuilder();
|
||||||
|
}
|
||||||
|
codes.append(codeToken);
|
||||||
|
return codes;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected String mapCodePathToSearchParam(String theDataType, String thePath) {
|
||||||
|
switch (theDataType) {
|
||||||
|
case "MedicationAdministration":
|
||||||
|
case "MedicationDispense":
|
||||||
|
case "MedicationRequest":
|
||||||
|
case "MedicationStatement":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
default:
|
||||||
|
if (thePath.equals("vaccineCode")) return "vaccine-code";
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
return thePath.replace('.', '-').toLowerCase();
|
||||||
|
}
|
||||||
|
|
||||||
|
protected static boolean isPatientCompartment(String theDataType) {
|
||||||
|
if (theDataType == null) {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
switch (theDataType) {
|
||||||
|
case "Account":
|
||||||
|
case "AdverseEvent":
|
||||||
|
case "AllergyIntolerance":
|
||||||
|
case "Appointment":
|
||||||
|
case "AppointmentResponse":
|
||||||
|
case "AuditEvent":
|
||||||
|
case "Basic":
|
||||||
|
case "BodyStructure":
|
||||||
|
case "CarePlan":
|
||||||
|
case "CareTeam":
|
||||||
|
case "ChargeItem":
|
||||||
|
case "Claim":
|
||||||
|
case "ClaimResponse":
|
||||||
|
case "ClinicalImpression":
|
||||||
|
case "Communication":
|
||||||
|
case "CommunicationRequest":
|
||||||
|
case "Composition":
|
||||||
|
case "Condition":
|
||||||
|
case "Consent":
|
||||||
|
case "Coverage":
|
||||||
|
case "CoverageEligibilityRequest":
|
||||||
|
case "CoverageEligibilityResponse":
|
||||||
|
case "DetectedIssue":
|
||||||
|
case "DeviceRequest":
|
||||||
|
case "DeviceUseStatement":
|
||||||
|
case "DiagnosticReport":
|
||||||
|
case "DocumentManifest":
|
||||||
|
case "DocumentReference":
|
||||||
|
case "Encounter":
|
||||||
|
case "EnrollmentRequest":
|
||||||
|
case "EpisodeOfCare":
|
||||||
|
case "ExplanationOfBenefit":
|
||||||
|
case "FamilyMemberHistory":
|
||||||
|
case "Flag":
|
||||||
|
case "Goal":
|
||||||
|
case "Group":
|
||||||
|
case "ImagingStudy":
|
||||||
|
case "Immunization":
|
||||||
|
case "ImmunizationEvaluation":
|
||||||
|
case "ImmunizationRecommendation":
|
||||||
|
case "Invoice":
|
||||||
|
case "List":
|
||||||
|
case "MeasureReport":
|
||||||
|
case "Media":
|
||||||
|
case "MedicationAdministration":
|
||||||
|
case "MedicationDispense":
|
||||||
|
case "MedicationRequest":
|
||||||
|
case "MedicationStatement":
|
||||||
|
case "MolecularSequence":
|
||||||
|
case "NutritionOrder":
|
||||||
|
case "Observation":
|
||||||
|
case "Patient":
|
||||||
|
case "Person":
|
||||||
|
case "Procedure":
|
||||||
|
case "Provenance":
|
||||||
|
case "QuestionnaireResponse":
|
||||||
|
case "RelatedPerson":
|
||||||
|
case "RequestGroup":
|
||||||
|
case "ResearchSubject":
|
||||||
|
case "RiskAssessment":
|
||||||
|
case "Schedule":
|
||||||
|
case "ServiceRequest":
|
||||||
|
case "Specimen":
|
||||||
|
case "SupplyDelivery":
|
||||||
|
case "SupplyRequest":
|
||||||
|
case "VisionPrescription":
|
||||||
|
return true;
|
||||||
|
default:
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
protected String getPatientSearchParam(String theDataType) {
|
||||||
|
switch (theDataType) {
|
||||||
|
case "Account":
|
||||||
|
return "subject";
|
||||||
|
case "AdverseEvent":
|
||||||
|
return "subject";
|
||||||
|
case "AllergyIntolerance":
|
||||||
|
return "patient";
|
||||||
|
case "Appointment":
|
||||||
|
return "actor";
|
||||||
|
case "AppointmentResponse":
|
||||||
|
return "actor";
|
||||||
|
case "AuditEvent":
|
||||||
|
return "patient";
|
||||||
|
case "Basic":
|
||||||
|
return "patient";
|
||||||
|
case "BodyStructure":
|
||||||
|
return "patient";
|
||||||
|
case "CarePlan":
|
||||||
|
return "patient";
|
||||||
|
case "CareTeam":
|
||||||
|
return "patient";
|
||||||
|
case "ChargeItem":
|
||||||
|
return "subject";
|
||||||
|
case "Claim":
|
||||||
|
return "patient";
|
||||||
|
case "ClaimResponse":
|
||||||
|
return "patient";
|
||||||
|
case "ClinicalImpression":
|
||||||
|
return "subject";
|
||||||
|
case "Communication":
|
||||||
|
return "subject";
|
||||||
|
case "CommunicationRequest":
|
||||||
|
return "subject";
|
||||||
|
case "Composition":
|
||||||
|
return "subject";
|
||||||
|
case "Condition":
|
||||||
|
return "patient";
|
||||||
|
case "Consent":
|
||||||
|
return "patient";
|
||||||
|
case "Coverage":
|
||||||
|
return "beneficiary";
|
||||||
|
case "DetectedIssue":
|
||||||
|
return "patient";
|
||||||
|
case "DeviceRequest":
|
||||||
|
return "subject";
|
||||||
|
case "DeviceUseStatement":
|
||||||
|
return "subject";
|
||||||
|
case "DiagnosticReport":
|
||||||
|
return "subject";
|
||||||
|
case "DocumentManifest":
|
||||||
|
return "subject";
|
||||||
|
case "DocumentReference":
|
||||||
|
return "subject";
|
||||||
|
case "Encounter":
|
||||||
|
return "patient";
|
||||||
|
case "EnrollmentRequest":
|
||||||
|
return "subject";
|
||||||
|
case "EpisodeOfCare":
|
||||||
|
return "patient";
|
||||||
|
case "ExplanationOfBenefit":
|
||||||
|
return "patient";
|
||||||
|
case "FamilyMemberHistory":
|
||||||
|
return "patient";
|
||||||
|
case "Flag":
|
||||||
|
return "patient";
|
||||||
|
case "Goal":
|
||||||
|
return "patient";
|
||||||
|
case "Group":
|
||||||
|
return "member";
|
||||||
|
case "ImagingStudy":
|
||||||
|
return "patient";
|
||||||
|
case "Immunization":
|
||||||
|
return "patient";
|
||||||
|
case "ImmunizationRecommendation":
|
||||||
|
return "patient";
|
||||||
|
case "Invoice":
|
||||||
|
return "subject";
|
||||||
|
case "List":
|
||||||
|
return "subject";
|
||||||
|
case "MeasureReport":
|
||||||
|
return "patient";
|
||||||
|
case "Media":
|
||||||
|
return "subject";
|
||||||
|
case "MedicationAdministration":
|
||||||
|
return "patient";
|
||||||
|
case "MedicationDispense":
|
||||||
|
return "patient";
|
||||||
|
case "MedicationRequest":
|
||||||
|
return "subject";
|
||||||
|
case "MedicationStatement":
|
||||||
|
return "subject";
|
||||||
|
case "MolecularSequence":
|
||||||
|
return "patient";
|
||||||
|
case "NutritionOrder":
|
||||||
|
return "patient";
|
||||||
|
case "Observation":
|
||||||
|
return "subject";
|
||||||
|
case "Patient":
|
||||||
|
return "_id";
|
||||||
|
case "Person":
|
||||||
|
return "patient";
|
||||||
|
case "Procedure":
|
||||||
|
return "patient";
|
||||||
|
case "Provenance":
|
||||||
|
return "patient";
|
||||||
|
case "QuestionnaireResponse":
|
||||||
|
return "subject";
|
||||||
|
case "RelatedPerson":
|
||||||
|
return "patient";
|
||||||
|
case "RequestGroup":
|
||||||
|
return "subject";
|
||||||
|
case "ResearchSubject":
|
||||||
|
return "individual";
|
||||||
|
case "RiskAssessment":
|
||||||
|
return "subject";
|
||||||
|
case "Schedule":
|
||||||
|
return "actor";
|
||||||
|
case "ServiceRequest":
|
||||||
|
return "patient";
|
||||||
|
case "Specimen":
|
||||||
|
return "subject";
|
||||||
|
case "SupplyDelivery":
|
||||||
|
return "patient";
|
||||||
|
case "SupplyRequest":
|
||||||
|
return "subject";
|
||||||
|
case "VisionPrescription":
|
||||||
|
return "patient";
|
||||||
|
}
|
||||||
|
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
@ -0,0 +1,421 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - CDS Hooks
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
|
package ca.uhn.hapi.fhir.cdshooks.svc.cr.discovery;
|
||||||
|
|
||||||
|
import org.hl7.fhir.r5.model.CanonicalType;
|
||||||
|
import org.hl7.fhir.r5.model.Coding;
|
||||||
|
import org.hl7.fhir.r5.model.DataRequirement;
|
||||||
|
import org.hl7.fhir.r5.model.Extension;
|
||||||
|
import org.hl7.fhir.r5.model.Library;
|
||||||
|
import org.hl7.fhir.r5.model.PlanDefinition;
|
||||||
|
import org.hl7.fhir.r5.model.ValueSet;
|
||||||
|
import org.opencds.cqf.fhir.api.Repository;
|
||||||
|
import org.opencds.cqf.fhir.utility.SearchHelper;
|
||||||
|
|
||||||
|
import java.util.ArrayList;
|
||||||
|
import java.util.List;
|
||||||
|
import java.util.stream.Collectors;
|
||||||
|
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CQF_FHIR_QUERY_PATTERN;
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CRMI_EFFECTIVE_DATA_REQUIREMENTS;
|
||||||
|
|
||||||
|
public class PrefetchTemplateBuilderR5 extends BasePrefetchTemplateBuilder {
|
||||||
|
|
||||||
|
public PrefetchTemplateBuilderR5(Repository theRepository) {
|
||||||
|
super(theRepository);
|
||||||
|
}
|
||||||
|
|
||||||
|
public PrefetchUrlList getPrefetchUrlList(PlanDefinition thePlanDefinition) {
|
||||||
|
if (thePlanDefinition == null) return null;
|
||||||
|
PrefetchUrlList prefetchList = new PrefetchUrlList();
|
||||||
|
Library library = resolvePrimaryLibrary(thePlanDefinition);
|
||||||
|
if (library == null || !library.hasDataRequirement()) return null;
|
||||||
|
for (DataRequirement dataRequirement : library.getDataRequirement()) {
|
||||||
|
List<String> requestUrls = createRequestUrl(dataRequirement);
|
||||||
|
if (requestUrls != null) {
|
||||||
|
prefetchList.addAll(requestUrls);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
return prefetchList;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected Library resolvePrimaryLibrary(PlanDefinition thePlanDefinition) {
|
||||||
|
Library library = null;
|
||||||
|
Extension dataReqExt = thePlanDefinition.getExtensionByUrl(CRMI_EFFECTIVE_DATA_REQUIREMENTS);
|
||||||
|
// Use a Module Definition Library with Effective Data Requirements for the Plan Definition if it exists
|
||||||
|
if (dataReqExt != null && dataReqExt.hasValue()) {
|
||||||
|
CanonicalType moduleDefCanonical = (CanonicalType) dataReqExt.getValue();
|
||||||
|
library = (Library) SearchHelper.searchRepositoryByCanonical(myRepository, moduleDefCanonical);
|
||||||
|
}
|
||||||
|
// Otherwise use the primary Library
|
||||||
|
if (library == null && thePlanDefinition.hasLibrary()) {
|
||||||
|
// The CPGComputablePlanDefinition profile limits the cardinality of library to 1
|
||||||
|
library = (Library) SearchHelper.searchRepositoryByCanonical(
|
||||||
|
myRepository, thePlanDefinition.getLibrary().get(0));
|
||||||
|
}
|
||||||
|
return library;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> createRequestUrl(DataRequirement theDataRequirement) {
|
||||||
|
List<String> urlList = new ArrayList<>();
|
||||||
|
// if we have a fhirQueryPattern extensions, use them
|
||||||
|
List<Extension> fhirQueryExtList = theDataRequirement.getExtension().stream()
|
||||||
|
.filter(e -> e.getUrl().equals(CQF_FHIR_QUERY_PATTERN) && e.hasValue())
|
||||||
|
.collect(Collectors.toList());
|
||||||
|
if (fhirQueryExtList != null && !fhirQueryExtList.isEmpty()) {
|
||||||
|
for (Extension fhirQueryExt : fhirQueryExtList) {
|
||||||
|
urlList.add(fhirQueryExt.getValueAsPrimitive().getValueAsString());
|
||||||
|
}
|
||||||
|
return urlList;
|
||||||
|
}
|
||||||
|
|
||||||
|
// else build the query
|
||||||
|
if (!isPatientCompartment(theDataRequirement.getType().toCode())) return null;
|
||||||
|
String patientRelatedResource = theDataRequirement.getType() + "?"
|
||||||
|
+ getPatientSearchParam(theDataRequirement.getType().toCode())
|
||||||
|
+ "=Patient/" + PATIENT_ID_CONTEXT;
|
||||||
|
|
||||||
|
// TODO: Add valueFilter extension resolution
|
||||||
|
|
||||||
|
if (theDataRequirement.hasCodeFilter()) {
|
||||||
|
resolveCodeFilter(theDataRequirement, urlList, patientRelatedResource);
|
||||||
|
} else {
|
||||||
|
urlList.add(patientRelatedResource);
|
||||||
|
}
|
||||||
|
return urlList;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected void resolveCodeFilter(DataRequirement theDataRequirement, List<String> theUrlList, String theBaseQuery) {
|
||||||
|
for (DataRequirement.DataRequirementCodeFilterComponent codeFilterComponent :
|
||||||
|
theDataRequirement.getCodeFilter()) {
|
||||||
|
if (!codeFilterComponent.hasPath()) continue;
|
||||||
|
String path =
|
||||||
|
mapCodePathToSearchParam(theDataRequirement.getType().toCode(), codeFilterComponent.getPath());
|
||||||
|
if (codeFilterComponent.hasValueSetElement()) {
|
||||||
|
for (String codes : resolveValueSetCodes(codeFilterComponent.getValueSetElement())) {
|
||||||
|
theUrlList.add(theBaseQuery + "&" + path + "=" + codes);
|
||||||
|
}
|
||||||
|
} else if (codeFilterComponent.hasCode()) {
|
||||||
|
List<Coding> codeFilterValueCodings = codeFilterComponent.getCode();
|
||||||
|
boolean isFirstCodingInFilter = true;
|
||||||
|
for (String code : resolveValueCodingCodes(codeFilterValueCodings)) {
|
||||||
|
if (isFirstCodingInFilter) {
|
||||||
|
theUrlList.add(theBaseQuery + "&" + path + "=" + code);
|
||||||
|
} else {
|
||||||
|
theUrlList.add("," + code);
|
||||||
|
}
|
||||||
|
|
||||||
|
isFirstCodingInFilter = false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> resolveValueCodingCodes(List<Coding> theValueCodings) {
|
||||||
|
List<String> result = new ArrayList<>();
|
||||||
|
|
||||||
|
StringBuilder codes = new StringBuilder();
|
||||||
|
for (Coding coding : theValueCodings) {
|
||||||
|
if (coding.hasCode()) {
|
||||||
|
String system = coding.getSystem();
|
||||||
|
String code = coding.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
result.add(codes.toString());
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected List<String> resolveValueSetCodes(CanonicalType theValueSetId) {
|
||||||
|
ValueSet valueSet = (ValueSet) SearchHelper.searchRepositoryByCanonical(myRepository, theValueSetId);
|
||||||
|
List<String> result = new ArrayList<>();
|
||||||
|
StringBuilder codes = new StringBuilder();
|
||||||
|
if (valueSet.hasExpansion() && valueSet.getExpansion().hasContains()) {
|
||||||
|
for (ValueSet.ValueSetExpansionContainsComponent contains :
|
||||||
|
valueSet.getExpansion().getContains()) {
|
||||||
|
String system = contains.getSystem();
|
||||||
|
String code = contains.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
} else if (valueSet.hasCompose() && valueSet.getCompose().hasInclude()) {
|
||||||
|
for (ValueSet.ConceptSetComponent concepts : valueSet.getCompose().getInclude()) {
|
||||||
|
String system = concepts.getSystem();
|
||||||
|
if (concepts.hasConcept()) {
|
||||||
|
for (ValueSet.ConceptReferenceComponent concept : concepts.getConcept()) {
|
||||||
|
String code = concept.getCode();
|
||||||
|
|
||||||
|
codes = getCodesStringBuilder(result, codes, system, code);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
}
|
||||||
|
result.add(codes.toString());
|
||||||
|
return result;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected StringBuilder getCodesStringBuilder(
|
||||||
|
List<String> theList, StringBuilder theCodes, String theSystem, String theCode) {
|
||||||
|
String codeToken = theSystem + "|" + theCode;
|
||||||
|
int postAppendLength = theCodes.length() + codeToken.length();
|
||||||
|
|
||||||
|
if (theCodes.length() > 0 && postAppendLength < myMaxUriLength) {
|
||||||
|
theCodes.append(",");
|
||||||
|
} else if (postAppendLength > myMaxUriLength) {
|
||||||
|
theList.add(theCodes.toString());
|
||||||
|
theCodes = new StringBuilder();
|
||||||
|
}
|
||||||
|
theCodes.append(codeToken);
|
||||||
|
return theCodes;
|
||||||
|
}
|
||||||
|
|
||||||
|
protected String mapCodePathToSearchParam(String theDataType, String thePath) {
|
||||||
|
switch (theDataType) {
|
||||||
|
case "MedicationAdministration":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "MedicationDispense":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "MedicationRequest":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
case "MedicationStatement":
|
||||||
|
if (thePath.equals("medication")) return "code";
|
||||||
|
break;
|
||||||
|
default:
|
||||||
|
if (thePath.equals("vaccineCode")) return "vaccine-code";
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
return thePath.replace('.', '-').toLowerCase();
|
||||||
|
}
|
||||||
|
|
||||||
|
public static boolean isPatientCompartment(String theDataType) {
|
||||||
|
if (theDataType == null) {
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
switch (theDataType) {
|
||||||
|
case "Account":
|
||||||
|
case "AdverseEvent":
|
||||||
|
case "AllergyIntolerance":
|
||||||
|
case "Appointment":
|
||||||
|
case "AppointmentResponse":
|
||||||
|
case "AuditEvent":
|
||||||
|
case "Basic":
|
||||||
|
case "BodyStructure":
|
||||||
|
case "CarePlan":
|
||||||
|
case "CareTeam":
|
||||||
|
case "ChargeItem":
|
||||||
|
case "Claim":
|
||||||
|
case "ClaimResponse":
|
||||||
|
case "ClinicalImpression":
|
||||||
|
case "Communication":
|
||||||
|
case "CommunicationRequest":
|
||||||
|
case "Composition":
|
||||||
|
case "Condition":
|
||||||
|
case "Consent":
|
||||||
|
case "Coverage":
|
||||||
|
case "CoverageEligibilityRequest":
|
||||||
|
case "CoverageEligibilityResponse":
|
||||||
|
case "DetectedIssue":
|
||||||
|
case "DeviceRequest":
|
||||||
|
case "DeviceUseStatement":
|
||||||
|
case "DiagnosticReport":
|
||||||
|
case "DocumentManifest":
|
||||||
|
case "DocumentReference":
|
||||||
|
case "Encounter":
|
||||||
|
case "EnrollmentRequest":
|
||||||
|
case "EpisodeOfCare":
|
||||||
|
case "ExplanationOfBenefit":
|
||||||
|
case "FamilyMemberHistory":
|
||||||
|
case "Flag":
|
||||||
|
case "Goal":
|
||||||
|
case "Group":
|
||||||
|
case "ImagingStudy":
|
||||||
|
case "Immunization":
|
||||||
|
case "ImmunizationEvaluation":
|
||||||
|
case "ImmunizationRecommendation":
|
||||||
|
case "Invoice":
|
||||||
|
case "List":
|
||||||
|
case "MeasureReport":
|
||||||
|
case "Media":
|
||||||
|
case "MedicationAdministration":
|
||||||
|
case "MedicationDispense":
|
||||||
|
case "MedicationRequest":
|
||||||
|
case "MedicationStatement":
|
||||||
|
case "MolecularSequence":
|
||||||
|
case "NutritionOrder":
|
||||||
|
case "Observation":
|
||||||
|
case "Patient":
|
||||||
|
case "Person":
|
||||||
|
case "Procedure":
|
||||||
|
case "Provenance":
|
||||||
|
case "QuestionnaireResponse":
|
||||||
|
case "RelatedPerson":
|
||||||
|
case "RequestGroup":
|
||||||
|
case "ResearchSubject":
|
||||||
|
case "RiskAssessment":
|
||||||
|
case "Schedule":
|
||||||
|
case "ServiceRequest":
|
||||||
|
case "Specimen":
|
||||||
|
case "SupplyDelivery":
|
||||||
|
case "SupplyRequest":
|
||||||
|
case "VisionPrescription":
|
||||||
|
return true;
|
||||||
|
default:
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
public String getPatientSearchParam(String theDataType) {
|
||||||
|
switch (theDataType) {
|
||||||
|
case "Account":
|
||||||
|
return "subject";
|
||||||
|
case "AdverseEvent":
|
||||||
|
return "subject";
|
||||||
|
case "AllergyIntolerance":
|
||||||
|
return "patient";
|
||||||
|
case "Appointment":
|
||||||
|
return "actor";
|
||||||
|
case "AppointmentResponse":
|
||||||
|
return "actor";
|
||||||
|
case "AuditEvent":
|
||||||
|
return "patient";
|
||||||
|
case "Basic":
|
||||||
|
return "patient";
|
||||||
|
case "BodyStructure":
|
||||||
|
return "patient";
|
||||||
|
case "CarePlan":
|
||||||
|
return "patient";
|
||||||
|
case "CareTeam":
|
||||||
|
return "patient";
|
||||||
|
case "ChargeItem":
|
||||||
|
return "subject";
|
||||||
|
case "Claim":
|
||||||
|
return "patient";
|
||||||
|
case "ClaimResponse":
|
||||||
|
return "patient";
|
||||||
|
case "ClinicalImpression":
|
||||||
|
return "subject";
|
||||||
|
case "Communication":
|
||||||
|
return "subject";
|
||||||
|
case "CommunicationRequest":
|
||||||
|
return "subject";
|
||||||
|
case "Composition":
|
||||||
|
return "subject";
|
||||||
|
case "Condition":
|
||||||
|
return "patient";
|
||||||
|
case "Consent":
|
||||||
|
return "patient";
|
||||||
|
case "Coverage":
|
||||||
|
return "beneficiary";
|
||||||
|
case "DetectedIssue":
|
||||||
|
return "patient";
|
||||||
|
case "DeviceRequest":
|
||||||
|
return "subject";
|
||||||
|
case "DeviceUseStatement":
|
||||||
|
return "subject";
|
||||||
|
case "DiagnosticReport":
|
||||||
|
return "subject";
|
||||||
|
case "DocumentManifest":
|
||||||
|
return "subject";
|
||||||
|
case "DocumentReference":
|
||||||
|
return "subject";
|
||||||
|
case "Encounter":
|
||||||
|
return "patient";
|
||||||
|
case "EnrollmentRequest":
|
||||||
|
return "subject";
|
||||||
|
case "EpisodeOfCare":
|
||||||
|
return "patient";
|
||||||
|
case "ExplanationOfBenefit":
|
||||||
|
return "patient";
|
||||||
|
case "FamilyMemberHistory":
|
||||||
|
return "patient";
|
||||||
|
case "Flag":
|
||||||
|
return "patient";
|
||||||
|
case "Goal":
|
||||||
|
return "patient";
|
||||||
|
case "Group":
|
||||||
|
return "member";
|
||||||
|
case "ImagingStudy":
|
||||||
|
return "patient";
|
||||||
|
case "Immunization":
|
||||||
|
return "patient";
|
||||||
|
case "ImmunizationRecommendation":
|
||||||
|
return "patient";
|
||||||
|
case "Invoice":
|
||||||
|
return "subject";
|
||||||
|
case "List":
|
||||||
|
return "subject";
|
||||||
|
case "MeasureReport":
|
||||||
|
return "patient";
|
||||||
|
case "Media":
|
||||||
|
return "subject";
|
||||||
|
case "MedicationAdministration":
|
||||||
|
return "patient";
|
||||||
|
case "MedicationDispense":
|
||||||
|
return "patient";
|
||||||
|
case "MedicationRequest":
|
||||||
|
return "subject";
|
||||||
|
case "MedicationStatement":
|
||||||
|
return "subject";
|
||||||
|
case "MolecularSequence":
|
||||||
|
return "patient";
|
||||||
|
case "NutritionOrder":
|
||||||
|
return "patient";
|
||||||
|
case "Observation":
|
||||||
|
return "subject";
|
||||||
|
case "Patient":
|
||||||
|
return "_id";
|
||||||
|
case "Person":
|
||||||
|
return "patient";
|
||||||
|
case "Procedure":
|
||||||
|
return "patient";
|
||||||
|
case "Provenance":
|
||||||
|
return "patient";
|
||||||
|
case "QuestionnaireResponse":
|
||||||
|
return "subject";
|
||||||
|
case "RelatedPerson":
|
||||||
|
return "patient";
|
||||||
|
case "RequestGroup":
|
||||||
|
return "subject";
|
||||||
|
case "ResearchSubject":
|
||||||
|
return "individual";
|
||||||
|
case "RiskAssessment":
|
||||||
|
return "subject";
|
||||||
|
case "Schedule":
|
||||||
|
return "actor";
|
||||||
|
case "ServiceRequest":
|
||||||
|
return "patient";
|
||||||
|
case "Specimen":
|
||||||
|
return "subject";
|
||||||
|
case "SupplyDelivery":
|
||||||
|
return "patient";
|
||||||
|
case "SupplyRequest":
|
||||||
|
return "subject";
|
||||||
|
case "VisionPrescription":
|
||||||
|
return "patient";
|
||||||
|
}
|
||||||
|
|
||||||
|
return null;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
@ -40,5 +40,4 @@ public class CrDiscoveryServiceR4Test extends BaseCrTest {
|
||||||
"}";
|
"}";
|
||||||
assertEquals(expected, actual);
|
assertEquals(expected, actual);
|
||||||
}
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
|
||||||
|
|
@ -0,0 +1,50 @@
|
||||||
|
package ca.uhn.hapi.fhir.cdshooks.svc.cr.discovery;
|
||||||
|
|
||||||
|
import ca.uhn.fhir.util.ClasspathUtil;
|
||||||
|
import ca.uhn.hapi.fhir.cdshooks.svc.cr.BaseCrTest;
|
||||||
|
import org.hl7.fhir.r4.model.CanonicalType;
|
||||||
|
import org.hl7.fhir.r4.model.Library;
|
||||||
|
import org.hl7.fhir.r4.model.PlanDefinition;
|
||||||
|
import org.hl7.fhir.r4.model.StringType;
|
||||||
|
import org.junit.jupiter.api.BeforeEach;
|
||||||
|
import org.junit.jupiter.api.Test;
|
||||||
|
import org.junit.jupiter.api.extension.ExtendWith;
|
||||||
|
import org.mockito.InjectMocks;
|
||||||
|
import org.mockito.Mock;
|
||||||
|
import org.mockito.Spy;
|
||||||
|
import org.mockito.junit.jupiter.MockitoExtension;
|
||||||
|
import org.opencds.cqf.fhir.api.Repository;
|
||||||
|
|
||||||
|
import java.util.Arrays;
|
||||||
|
|
||||||
|
import static ca.uhn.hapi.fhir.cdshooks.svc.cr.CdsCrConstants.CRMI_EFFECTIVE_DATA_REQUIREMENTS;
|
||||||
|
import static org.junit.Assert.assertEquals;
|
||||||
|
import static org.junit.Assert.assertNotNull;
|
||||||
|
import static org.mockito.Mockito.doReturn;
|
||||||
|
|
||||||
|
@ExtendWith(MockitoExtension.class)
|
||||||
|
class PrefetchTemplateBuilderR4Test extends BaseCrTest {
|
||||||
|
@Mock
|
||||||
|
Repository myRepository;
|
||||||
|
|
||||||
|
@InjectMocks
|
||||||
|
@Spy
|
||||||
|
PrefetchTemplateBuilderR4 myFixture;
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testR4DiscoveryServiceWithEffectiveDataRequirements() {
|
||||||
|
PlanDefinition planDefinition = new PlanDefinition();
|
||||||
|
planDefinition.addExtension(CRMI_EFFECTIVE_DATA_REQUIREMENTS,
|
||||||
|
new CanonicalType("http://hl7.org/fhir/uv/crmi/Library/moduledefinition-example"));
|
||||||
|
planDefinition.setId("ModuleDefinitionTest");
|
||||||
|
Library library = ClasspathUtil.loadResource(myFhirContext, Library.class, "ModuleDefinitionExample.json");
|
||||||
|
doReturn(library).when(myFixture).resolvePrimaryLibrary(planDefinition);
|
||||||
|
PrefetchUrlList actual = myFixture.getPrefetchUrlList(planDefinition);
|
||||||
|
assertNotNull(actual);
|
||||||
|
PrefetchUrlList expected = new PrefetchUrlList();
|
||||||
|
expected.addAll(Arrays.asList("Patient?_id={{context.patientId}}",
|
||||||
|
"Encounter?status=finished&subject=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292",
|
||||||
|
"Coverage?policy-holder=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591"));
|
||||||
|
assertEquals(expected, actual);
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
@ -0,0 +1,298 @@
|
||||||
|
{
|
||||||
|
"resourceType": "Library",
|
||||||
|
"id": "moduledefinition-example",
|
||||||
|
"meta": {
|
||||||
|
"profile": [
|
||||||
|
"http://hl7.org/fhir/uv/crmi/StructureDefinition/crmi-moduledefinitionlibrary"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"url": "http://hl7.org/fhir/uv/crmi/Library/moduledefinition-example",
|
||||||
|
"identifier": [
|
||||||
|
{
|
||||||
|
"use": "official",
|
||||||
|
"system": "http://example.org/fhir/cqi/ecqm/Library/Identifier",
|
||||||
|
"value": "EXMLogic"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"system": "urn:ietf:rfc:3986",
|
||||||
|
"value": "urn:oid:2.16.840.1.113883.4.642.40.38.28.7"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"version": "1.0.0-snapshot",
|
||||||
|
"name": "EXMLogicModuleDefinition",
|
||||||
|
"title": "Example Logic Library - Module Definition",
|
||||||
|
"status": "active",
|
||||||
|
"experimental": true,
|
||||||
|
"type": {
|
||||||
|
"coding": [
|
||||||
|
{
|
||||||
|
"system": "http://terminology.hl7.org/CodeSystem/library-type",
|
||||||
|
"code": "module-definition"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"date": "2019-09-03",
|
||||||
|
"publisher": "HL7 International / Clinical Decision Support",
|
||||||
|
"contact": [
|
||||||
|
{
|
||||||
|
"telecom": [
|
||||||
|
{
|
||||||
|
"system": "url",
|
||||||
|
"value": "http://www.hl7.org/Special/committees/dss"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"description": "This library is used as an example module definition in the FHIR Quality Measure Implementation Guide",
|
||||||
|
"jurisdiction": [
|
||||||
|
{
|
||||||
|
"coding": [
|
||||||
|
{
|
||||||
|
"system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
|
||||||
|
"code": "001",
|
||||||
|
"display": "World"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"relatedArtifact": [
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "FHIR model information",
|
||||||
|
"resource": "http://fhir.org/guides/cqf/common/Library/FHIR-ModelInfo|4.0.1"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Library FHIRHelpers",
|
||||||
|
"resource": "http://fhir.org/guides/cqf/common/Library/FHIRHelpers|4.0.1"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Code system Diagnosis Role",
|
||||||
|
"resource": "http://terminology.hl7.org/CodeSystem/diagnosis-role"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set Emergency Department Visit",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set Psychiatric/Mental Health Patient",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.299"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set Hospital Settings",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1111.126"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set ONC Administrative Sex",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set Race",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.836"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set Ethnicity",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.837"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "depends-on",
|
||||||
|
"display": "Value set Payer",
|
||||||
|
"resource": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"parameter": [
|
||||||
|
{
|
||||||
|
"name": "Measurement Period",
|
||||||
|
"use": "in",
|
||||||
|
"min": 0,
|
||||||
|
"max": "1",
|
||||||
|
"type": "Period"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Patient",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "1",
|
||||||
|
"type": "Patient"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Inpatient Encounter",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Initial Population",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Measure Population",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Stratifier 1",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Stratifier 2",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Stratifier 3",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "Stratifier 4",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Encounter"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "SDE Ethnicity",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Coding"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "SDE Payer",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Resource"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "SDE Race",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "*",
|
||||||
|
"type": "Coding"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"name": "SDE Sex",
|
||||||
|
"use": "out",
|
||||||
|
"min": 0,
|
||||||
|
"max": "1",
|
||||||
|
"type": "Coding"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"dataRequirement": [
|
||||||
|
{
|
||||||
|
"extension": [
|
||||||
|
{
|
||||||
|
"url": "http://hl7.org/fhir/StructureDefinition/cqf-fhirQueryPattern",
|
||||||
|
"valueString": "Patient?_id={{context.patientId}}"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"type": "Patient",
|
||||||
|
"profile": [
|
||||||
|
"http://hl7.org/fhir/us/qicore/StructureDefinition/qicore-patient"
|
||||||
|
],
|
||||||
|
"mustSupport": [
|
||||||
|
"extension('http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity')"
|
||||||
|
],
|
||||||
|
"_mustSupport": [
|
||||||
|
{
|
||||||
|
"extension": [
|
||||||
|
{
|
||||||
|
"url": "http://hl7.org/fhir/StructureDefinition/rendered-value",
|
||||||
|
"valueString": "ethnicity"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
]
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"extension": [
|
||||||
|
{
|
||||||
|
"url": "http://hl7.org/fhir/StructureDefinition/cqf-fhirQueryPattern",
|
||||||
|
"valueString": "Encounter?status=finished&subject=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"url": "http://hl7.org/fhir/StructureDefinition/cqf-isSelective",
|
||||||
|
"valueBoolean": true
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"extension": [
|
||||||
|
{
|
||||||
|
"url": "path",
|
||||||
|
"valueString": "status"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"url": "comparator",
|
||||||
|
"valueCode": "eq"
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"url": "value",
|
||||||
|
"valueString": "finished"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"url": "http://hl7.org/fhir/StructureDefinition/cqf-valueFilter"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"type": "Encounter",
|
||||||
|
"profile": [
|
||||||
|
"http://hl7.org/fhir/us/qicore/StructureDefinition/qicore-encounter"
|
||||||
|
],
|
||||||
|
"codeFilter": [
|
||||||
|
{
|
||||||
|
"path": "type",
|
||||||
|
"valueSet": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"type": "Condition",
|
||||||
|
"profile": [
|
||||||
|
"http://hl7.org/fhir/StructureDefinition/Condition"
|
||||||
|
],
|
||||||
|
"codeFilter": [
|
||||||
|
{
|
||||||
|
"path": "id"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"extension": [
|
||||||
|
{
|
||||||
|
"url": "http://hl7.org/fhir/StructureDefinition/cqf-fhirQueryPattern",
|
||||||
|
"valueString": "Coverage?policy-holder=Patient/{{context.patientId}}&type:in=http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591"
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"type": "Coverage",
|
||||||
|
"profile": [
|
||||||
|
"http://hl7.org/fhir/us/qicore/StructureDefinition/qicore-coverage"
|
||||||
|
],
|
||||||
|
"codeFilter": [
|
||||||
|
{
|
||||||
|
"path": "type",
|
||||||
|
"valueSet": "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
|
@ -1,3 +1,22 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - Clinical Reasoning
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
package ca.uhn.fhir.cr.r4;
|
package ca.uhn.fhir.cr.r4;
|
||||||
|
|
||||||
import ca.uhn.fhir.rest.api.server.RequestDetails;
|
import ca.uhn.fhir.rest.api.server.RequestDetails;
|
||||||
|
|
|
||||||
|
|
@ -1,3 +1,22 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - Clinical Reasoning
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
package ca.uhn.fhir.cr.r4;
|
package ca.uhn.fhir.cr.r4;
|
||||||
|
|
||||||
import ca.uhn.fhir.rest.api.server.RequestDetails;
|
import ca.uhn.fhir.rest.api.server.RequestDetails;
|
||||||
|
|
|
||||||
|
|
@ -1,3 +1,22 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - Clinical Reasoning
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
package ca.uhn.fhir.cr.r4.measure;
|
package ca.uhn.fhir.cr.r4.measure;
|
||||||
|
|
||||||
import ca.uhn.fhir.cr.r4.ICollectDataServiceFactory;
|
import ca.uhn.fhir.cr.r4.ICollectDataServiceFactory;
|
||||||
|
|
|
||||||
|
|
@ -1,3 +1,22 @@
|
||||||
|
/*-
|
||||||
|
* #%L
|
||||||
|
* HAPI FHIR - Clinical Reasoning
|
||||||
|
* %%
|
||||||
|
* Copyright (C) 2014 - 2024 Smile CDR, Inc.
|
||||||
|
* %%
|
||||||
|
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||||
|
* you may not use this file except in compliance with the License.
|
||||||
|
* You may obtain a copy of the License at
|
||||||
|
*
|
||||||
|
* http://www.apache.org/licenses/LICENSE-2.0
|
||||||
|
*
|
||||||
|
* Unless required by applicable law or agreed to in writing, software
|
||||||
|
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||||
|
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||||
|
* See the License for the specific language governing permissions and
|
||||||
|
* limitations under the License.
|
||||||
|
* #L%
|
||||||
|
*/
|
||||||
package ca.uhn.fhir.cr.r4.measure;
|
package ca.uhn.fhir.cr.r4.measure;
|
||||||
|
|
||||||
import ca.uhn.fhir.cr.r4.IDataRequirementsServiceFactory;
|
import ca.uhn.fhir.cr.r4.IDataRequirementsServiceFactory;
|
||||||
|
|
|
||||||
Loading…
Reference in New Issue