Add some more sql syntax tests for Postgres, Oracle, and Sql Server (#5923)

Also:
- fix total parsing in internal MatchUrl service.
- Add more syntax tests for our docker database tests
- Change DaoTestDataBuilder to use a bundle with delete entries for teardown.

hapi-fhir-jpaserver-searchparam/src/main/java/ca/uhn/fhir/jpa/searchparam/MatchUrlService.java

@@ -127,6 +127,10 @@ public class MatchUrlService {
 						&& !paramList.isEmpty()
 						&& !paramList.get(0).isEmpty()) {
 					String totalModeEnumStr = paramList.get(0).get(0);
+					SearchTotalModeEnum searchTotalMode = SearchTotalModeEnum.fromCode(totalModeEnumStr);
+					if (searchTotalMode == null) {
+						// We had an oops here supporting the UPPER CASE enum instead of the FHIR code for _total.
+						// Keep supporting it in case someone is using it.
 						try {
 							paramMap.setSearchTotalMode(SearchTotalModeEnum.valueOf(totalModeEnumStr));
 						} catch (IllegalArgumentException e) {
@@ -134,6 +138,8 @@ public class MatchUrlService {
 									+ Constants.PARAM_SEARCH_TOTAL_MODE + " value: " + totalModeEnumStr);
 						}
 					}
+					paramMap.setSearchTotalMode(searchTotalMode);
+				}
 			} else if (Constants.PARAM_OFFSET.equals(nextParamName)) {
 				if (paramList != null
 						&& paramList.size() > 0

hapi-fhir-jpaserver-test-dstu3/src/test/java/ca/uhn/fhir/jpa/searchparam/MatchUrlServiceTest.java

@@ -6,6 +6,7 @@ import ca.uhn.fhir.i18n.Msg;
 import ca.uhn.fhir.jpa.searchparam.util.Dstu3DistanceHelper;
 import ca.uhn.fhir.jpa.test.BaseJpaTest;
 import ca.uhn.fhir.jpa.test.config.TestDstu3Config;
+import ca.uhn.fhir.rest.api.SearchTotalModeEnum;
 import ca.uhn.fhir.rest.param.QuantityParam;
 import ca.uhn.fhir.rest.param.ReferenceParam;
 import ca.uhn.fhir.rest.server.util.ISearchParamRegistry;
@@ -97,6 +98,26 @@ public class MatchUrlServiceTest extends BaseJpaTest {
 		}
 	}
 
+	@Test
+	void testTotal_fromStandardLowerCase() {
+	    // given
+	    // when
+		var map = myMatchUrlService.translateMatchUrl("Patient?family=smith&_total=none", ourCtx.getResourceDefinition("Patient"));
+
+	    // then
+	    assertEquals(SearchTotalModeEnum.NONE, map.getSearchTotalMode());
+	}
+
+	@Test
+	void testTotal_fromUpperCase() {
+		// given
+		// when
+		var map = myMatchUrlService.translateMatchUrl("Patient?family=smith&_total=none", ourCtx.getResourceDefinition("Patient"));
+
+		// then
+		assertEquals(SearchTotalModeEnum.NONE, map.getSearchTotalMode());
+	}
+
 	@Override
 	protected FhirContext getFhirContext() {
 		return ourCtx;

hapi-fhir-jpaserver-test-r5/src/test/java/ca/uhn/fhir/jpa/dao/r5/database/BaseDatabaseVerificationIT.java

@@ -11,11 +11,9 @@ import ca.uhn.fhir.jpa.migrate.SchemaMigrator;
 import ca.uhn.fhir.jpa.migrate.dao.HapiMigrationDao;
 import ca.uhn.fhir.jpa.migrate.tasks.HapiFhirJpaMigrationTasks;
 import ca.uhn.fhir.jpa.search.DatabaseBackedPagingProvider;
-import ca.uhn.fhir.jpa.searchparam.SearchParameterMap;
 import ca.uhn.fhir.jpa.test.BaseJpaTest;
 import ca.uhn.fhir.jpa.test.config.TestR5Config;
 import ca.uhn.fhir.rest.api.EncodingEnum;
-import ca.uhn.fhir.rest.api.SortSpec;
 import ca.uhn.fhir.rest.api.server.SystemRequestDetails;
 import ca.uhn.fhir.rest.client.api.IGenericClient;
 import ca.uhn.fhir.rest.server.exceptions.ResourceGoneException;
@@ -36,6 +34,7 @@ import org.junit.jupiter.api.Test;
 import org.junit.jupiter.api.extension.ExtendWith;
 import org.junit.jupiter.api.extension.RegisterExtension;
 import org.junit.jupiter.params.ParameterizedTest;
+import org.junit.jupiter.params.provider.CsvSource;
 import org.junit.jupiter.params.provider.ValueSource;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
@@ -57,6 +56,7 @@ import java.util.Set;
 import static ca.uhn.fhir.jpa.model.util.JpaConstants.OPERATION_EVERYTHING;
 import static org.hamcrest.MatcherAssert.assertThat;
 import static org.hamcrest.Matchers.containsInAnyOrder;
+import static org.junit.jupiter.api.Assertions.assertDoesNotThrow;
 import static org.junit.jupiter.api.Assertions.assertEquals;
 import static org.junit.jupiter.api.Assertions.assertThrows;
 
@@ -160,22 +160,23 @@ public abstract class BaseDatabaseVerificationIT extends BaseJpaTest implements
         assertThat(values.toString(), values, containsInAnyOrder(expectedIds.toArray(new String[0])));
     }
 
-	@Test
-	void testChainedSort() {
-	    // given
-
-	    // when
-		SearchParameterMap map = SearchParameterMap
-			.newSynchronous()
-			.setSort(new SortSpec("Practitioner:general-practitioner.family"));
-		myCaptureQueriesListener.clear();
-		myPatientDao.search(map, mySrd);
-
+	@ParameterizedTest
+	@CsvSource(textBlock = """
+			query string,			Patient?name=smith
+			query date,				Observation?date=2021
+			query token,			Patient?active=true
+			sort string, 			Patient?_sort=name
+			sort date, 				Observation?_sort=date
+			sort token, 			Patient?_sort=active
+			sort chained date, 		Observation?_sort=patient.birthdate
+			sort chained string, 	Observation?_sort=patient.name
+			sort chained qualified, Patient?_sort=Practitioner:general-practitioner.family
+			sort chained token, 	Observation?_sort=patient.active
+			""")
+	void testSyntaxForVariousQueries(String theMessage, String theQuery) {
+		assertDoesNotThrow(()->myTestDaoSearch.searchForBundleProvider(theQuery), theMessage);
 	}
 
-
-
-
 	@Configuration
 	public static class TestConfig extends TestR5Config {
 
@@ -238,11 +239,13 @@ public abstract class BaseDatabaseVerificationIT extends BaseJpaTest implements
 		}
 	}
 
+	@SuppressWarnings("unchecked")
 	@Override
 	public IIdType doCreateResource(IBaseResource theResource) {
 		return myDaoRegistry.getResourceDao(myFhirContext.getResourceType(theResource)).create(theResource, new SystemRequestDetails()).getId();
 	}
 
+	@SuppressWarnings("unchecked")
 	@Override
 	public IIdType doUpdateResource(IBaseResource theResource) {
 		return myDaoRegistry.getResourceDao(myFhirContext.getResourceType(theResource)).update(theResource, new SystemRequestDetails()).getId();

hapi-fhir-storage-test-utilities/src/main/java/ca/uhn/fhir/storage/test/DaoTestDataBuilder.java

@@ -25,6 +25,7 @@ import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
 import ca.uhn.fhir.rest.api.server.RequestDetails;
 import ca.uhn.fhir.rest.api.server.SystemRequestDetails;
 import ca.uhn.fhir.test.utilities.ITestDataBuilder;
+import ca.uhn.fhir.util.BundleBuilder;
 import com.google.common.collect.HashMultimap;
 import com.google.common.collect.SetMultimap;
 import org.hl7.fhir.instance.model.api.IBaseResource;
@@ -97,21 +98,26 @@ public class DaoTestDataBuilder implements ITestDataBuilder.WithSupport, ITestDa
 	}
 
 	/**
-	 * Delete anything created
+	 * Delete anything created by this builder since the last cleanup().
 	 */
 	public void cleanup() {
 		ourLog.info("cleanup {}", myIds);
 
-		myIds.keySet().stream()
-			.sorted() // Hack to ensure Patients are deleted before Practitioners.  This may need to be refined.
-			.forEach(nextType->{
-			// todo do this in a bundle for perf.
-			IFhirResourceDao<?> dao = myDaoRegistry.getResourceDao(nextType);
-			myIds.get(nextType).forEach(dao::delete);
-		});
+		var builder = new BundleBuilder(myFhirCtx);
+		myIds.values()
+			.forEach(builder::addTransactionDeleteEntry);
+		var bundle = builder.getBundle();
+
+		ourLog.trace("Deleting in bundle {}", myFhirCtx.newJsonParser().encodeToString(bundle));
+		//noinspection unchecked
+		myDaoRegistry.getSystemDao().transaction(mySrd, bundle);
+
 		myIds.clear();
 	}
 
+	/**
+	 * Tear down and cleanup any Resources created during execution.
+	 */
 	@Override
 	public void afterEach(ExtensionContext context) throws Exception {
 		cleanup();