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hapi-fhir
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Add test

This commit is contained in:
jamesagnew 2021-11-09 15:02:01 -05:00
parent e29ad5179a
commit 1abd046cc9
4 changed files with 92 additions and 9 deletions
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9
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/data/IResourceHistoryTableDao.java
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@ -8,6 +8,8 @@ import org.springframework.data.jpa.repository.Modifying;
import org.springframework.data.jpa.repository.Query;
import org.springframework.data.repository.query.Param;
import java.util.List;
/*
* #%L
* HAPI FHIR JPA Server
@ -30,6 +32,13 @@ import org.springframework.data.repository.query.Param;
public interface IResourceHistoryTableDao extends JpaRepository<ResourceHistoryTable, Long>, IHapiFhirJpaRepository {
/**
* This is really only intended for unit tests - There can be many versions of resources in
* the real world, use a pageable query for real uses.
*/
@Query("SELECT t FROM ResourceHistoryTable t WHERE t.myResourceId = :resId ORDER BY t.myResourceVersion ASC")
List<ResourceHistoryTable> findAllVersionsForResourceIdInOrder(@Param("resId") Long theId);
@Query("SELECT t FROM ResourceHistoryTable t LEFT OUTER JOIN FETCH t.myProvenance WHERE t.myResourceId = :id AND t.myResourceVersion = :version")
ResourceHistoryTable findForIdAndVersionAndFetchProvenance(@Param("id") long theId, @Param("version") long theVersion);

3
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/expunge/DeleteExpungeDaoTest.java
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@ -17,11 +17,9 @@ import org.hl7.fhir.r4.model.OperationOutcome;
import org.hl7.fhir.r4.model.Organization;
import org.hl7.fhir.r4.model.Patient;
import org.hl7.fhir.r4.model.Reference;
import org.hl7.fhir.r5.model.StructureDefinition;
import org.junit.jupiter.api.AfterEach;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.mockito.stubbing.Answer;
import org.springframework.batch.core.BatchStatus;
import org.springframework.batch.core.JobExecution;
import org.springframework.beans.factory.annotation.Autowired;
@ -32,7 +30,6 @@ import static org.hamcrest.MatcherAssert.assertThat;
import static org.hamcrest.Matchers.containsString;
import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertThrows;
import static org.mockito.ArgumentMatchers.nullable;
import static org.mockito.Mockito.when;
class DeleteExpungeDaoTest extends BaseJpaR4Test {

80
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/ExpungeR4Test.java
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@ -5,9 +5,15 @@ import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.api.model.ExpungeOptions;
import ca.uhn.fhir.jpa.dao.data.ISearchDao;
import ca.uhn.fhir.jpa.dao.data.ISearchResultDao;
import ca.uhn.fhir.jpa.interceptor.CascadingDeleteInterceptor;
import ca.uhn.fhir.jpa.model.entity.NormalizedQuantitySearchLevel;
import ca.uhn.fhir.jpa.model.entity.ResourceHistoryTable;
import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.jpa.model.util.JpaConstants;
import ca.uhn.fhir.jpa.model.util.UcumServiceUtil;
import ca.uhn.fhir.jpa.search.PersistedJpaSearchFirstPageBundleProvider;
import ca.uhn.fhir.jpa.searchparam.SearchParameterMap;
import ca.uhn.fhir.rest.api.Constants;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
import ca.uhn.fhir.rest.param.ReferenceParam;
import ca.uhn.fhir.rest.param.TokenParam;
@ -15,8 +21,9 @@ import ca.uhn.fhir.rest.server.exceptions.PreconditionFailedException;
import ca.uhn.fhir.rest.server.exceptions.ResourceGoneException;
import ca.uhn.fhir.rest.server.exceptions.ResourceNotFoundException;
import ca.uhn.fhir.util.HapiExtensions;
import ca.uhn.fhir.jpa.model.util.UcumServiceUtil;
import org.apache.commons.io.IOUtils;
import org.apache.http.client.methods.CloseableHttpResponse;
import org.apache.http.client.methods.HttpDelete;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.r4.model.BooleanType;
@ -25,9 +32,12 @@ import org.hl7.fhir.r4.model.DateType;
import org.hl7.fhir.r4.model.DecimalType;
import org.hl7.fhir.r4.model.Enumerations;
import org.hl7.fhir.r4.model.IdType;
import org.hl7.fhir.r4.model.MedicationRequest;
import org.hl7.fhir.r4.model.Observation;
import org.hl7.fhir.r4.model.Organization;
import org.hl7.fhir.r4.model.Patient;
import org.hl7.fhir.r4.model.Quantity;
import org.hl7.fhir.r4.model.Reference;
import org.hl7.fhir.r4.model.SearchParameter;
import org.junit.jupiter.api.AfterEach;
import org.junit.jupiter.api.BeforeEach;
@ -36,6 +46,8 @@ import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import java.io.IOException;
import java.nio.charset.StandardCharsets;
import java.util.List;
import static org.awaitility.Awaitility.await;
@ -43,6 +55,8 @@ import static org.hamcrest.MatcherAssert.assertThat;
import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.not;
import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertNotNull;
import static org.junit.jupiter.api.Assertions.assertNull;
import static org.junit.jupiter.api.Assertions.assertTrue;
import static org.junit.jupiter.api.Assertions.fail;
@ -63,8 +77,10 @@ public class ExpungeR4Test extends BaseResourceProviderR4Test {
@AfterEach
public void afterDisableExpunge() {
myDaoConfig.setExpungeEnabled(new DaoConfig().isExpungeEnabled());
myModelConfig.setNormalizedQuantitySearchLevel(NormalizedQuantitySearchLevel.NORMALIZED_QUANTITY_SEARCH_NOT_SUPPORTED);
}
myModelConfig.setNormalizedQuantitySearchLevel(NormalizedQuantitySearchLevel.NORMALIZED_QUANTITY_SEARCH_NOT_SUPPORTED);
ourRestServer.getInterceptorService().unregisterInterceptorsIf(t -> t instanceof CascadingDeleteInterceptor);
}
@BeforeEach
public void beforeEnableExpunge() {
@ -187,6 +203,62 @@ public class ExpungeR4Test extends BaseResourceProviderR4Test {
return dao;
}
@Test
public void testDeleteCascade() throws IOException {
ourRestServer.registerInterceptor(new CascadingDeleteInterceptor(myFhirCtx, myDaoRegistry, myInterceptorRegistry));
// setup
Organization organization = new Organization();
organization.setName("FOO");
IIdType organizationId = myOrganizationDao.create(organization).getId().toUnqualifiedVersionless();
Organization organization2 = new Organization();
organization2.setName("FOO2");
organization2.getPartOf().setReference(organizationId.getValue());
IIdType organizationId2 = myOrganizationDao.create(organization2).getId().toUnqualifiedVersionless();
Patient patient = new Patient();
patient.setManagingOrganization(new Reference(organizationId2));
IIdType patientId = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
// execute
String url = ourServerBase + "/Organization/" + organizationId.getIdPart() + "?" +
Constants.PARAMETER_CASCADE_DELETE + "=" + Constants.CASCADE_DELETE
+ "&" +
JpaConstants.PARAM_DELETE_EXPUNGE + "=true"
;
HttpDelete delete = new HttpDelete(url);
try (CloseableHttpResponse response = ourHttpClient.execute(delete)) {
String responseString = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
ourLog.info("Response:\n{}", responseString);
assertEquals(200, response.getStatusLine().getStatusCode());
}
runInTransaction(() -> {
ResourceTable res;
List<ResourceHistoryTable> versions;
res = myResourceTableDao.findById(patientId.getIdPartAsLong()).orElseThrow(() -> new IllegalStateException());
assertNotNull(res.getDeleted());
versions = myResourceHistoryTableDao.findAllVersionsForResourceIdInOrder(patientId.getIdPartAsLong());
assertEquals(2, versions.size());
assertEquals(1L, versions.get(0).getVersion());
assertNull(versions.get(0).getDeleted());
assertEquals(2L, versions.get(1).getVersion());
assertNotNull(versions.get(1).getDeleted());
res = myResourceTableDao.findById(organizationId.getIdPartAsLong()).orElseThrow(() -> new IllegalStateException());
assertNotNull(res.getDeleted());
versions = myResourceHistoryTableDao.findAllVersionsForResourceIdInOrder(organizationId.getIdPartAsLong());
assertEquals(2, versions.size());
assertEquals(1L, versions.get(0).getVersion());
assertNull(versions.get(0).getDeleted());
assertEquals(2L, versions.get(1).getVersion());
assertNotNull(versions.get(1).getDeleted());
});
}
@Test
public void testExpungeInstanceOldVersionsAndDeleted() {
createStandardPatients();

5
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/stresstest/GiantTransactionPerfTest.java
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@ -340,6 +340,11 @@ public class GiantTransactionPerfTest {
private class MockResourceHistoryTableDao implements IResourceHistoryTableDao {
private int mySaveCount;
@Override
public List<ResourceHistoryTable> findAllVersionsForResourceIdInOrder(Long theId) {
throw new UnsupportedOperationException();
}
@Override
public ResourceHistoryTable findForIdAndVersionAndFetchProvenance(long theId, long theVersion) {
throw new UnsupportedOperationException();