honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity

Upgrade subscriptions to use interceptors across the board

This commit is contained in:
James Agnew 2017-08-14 15:19:41 -04:00
parent de5c01c00d
commit 1c88fd154d
54 changed files with 879 additions and 1064 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

20
hapi-fhir-base/src/main/java/ca/uhn/fhir/context/FhirContext.java
View File

@ -1,5 +1,6 @@
package ca.uhn.fhir.context;
import java.io.IOException;
import java.lang.reflect.Method;
/*
@ -324,7 +325,7 @@ public class FhirContext {
Map<Class<? extends IBase>, BaseRuntimeElementDefinition<?>> existing = new HashMap<>();
ModelScanner.scanVersionPropertyFile(null, nameToType, theVersion, existing);
Map<FhirVersionEnum, Map<String, Class<? extends IBaseResource>>> newVersionToNameToResourceType = new HashMap<FhirVersionEnum, Map<String, Class<? extends IBaseResource>>>();
Map<FhirVersionEnum, Map<String, Class<? extends IBaseResource>>> newVersionToNameToResourceType = new HashMap<>();
newVersionToNameToResourceType.putAll(myVersionToNameToResourceType);
newVersionToNameToResourceType.put(theVersion, nameToType);
myVersionToNameToResourceType = newVersionToNameToResourceType;
@ -913,16 +914,25 @@ public class FhirContext {
Set<String> resourceNames= new HashSet<>();
if (myNameToResourceDefinition.isEmpty()) {
Properties props = new Properties();
try {
props.load(myVersion.getFhirVersionPropertiesFile());
} catch (IOException theE) {
throw new ConfigurationException("Failed to load version properties file");
}
Enumeration<?> propNames = props.propertyNames();
while (propNames.hasMoreElements()){
String next = (String) propNames.nextElement();
if (next.startsWith("resource.")) {
resourceNames.add(next.substring("resource.".length()).trim());
}
}
}
for (RuntimeResourceDefinition next : myNameToResourceDefinition.values()) {
resourceNames.add(next.getName());
}
// Properties versionProperties = new Properties();
// versionProperties.load(myVersion.getFhirVersionPropertiesFile());
//
return Collections.unmodifiableSet(resourceNames);
}
}

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/BaseDstu2Config.java
View File

@ -28,7 +28,7 @@ import org.springframework.transaction.annotation.EnableTransactionManagement;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.jpa.dao.*;
import ca.uhn.fhir.jpa.interceptor.RestHookSubscriptionDstu2Interceptor;
import ca.uhn.fhir.jpa.subscription.dstu2.RestHookSubscriptionDstu2Interceptor;
import ca.uhn.fhir.jpa.term.HapiTerminologySvcDstu2;
import ca.uhn.fhir.jpa.term.IHapiTerminologySvc;
import ca.uhn.fhir.model.dstu2.composite.MetaDt;

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/WebsocketDstu2Config.java
View File

@ -31,7 +31,7 @@ import org.springframework.web.socket.config.annotation.WebSocketConfigurer;
import org.springframework.web.socket.config.annotation.WebSocketHandlerRegistry;
import org.springframework.web.socket.handler.PerConnectionWebSocketHandler;
import ca.uhn.fhir.jpa.subscription.SubscriptionWebsocketHandlerDstu2;
import ca.uhn.fhir.jpa.subscription.dstu2.SubscriptionWebsocketHandlerDstu2;
@Configuration
@EnableWebSocket()

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/WebsocketDstu2DispatcherConfig.java
View File

@ -28,7 +28,7 @@ import org.springframework.context.annotation.Configuration;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSubscription;
import ca.uhn.fhir.jpa.subscription.SubscriptionWebsocketHandlerDstu2;
import ca.uhn.fhir.jpa.subscription.dstu2.SubscriptionWebsocketHandlerDstu2;
import ca.uhn.fhir.model.dstu2.resource.Subscription;
@Configuration

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/dstu3/BaseDstu3Config.java
View File

@ -40,7 +40,7 @@ import ca.uhn.fhir.jpa.dao.IFulltextSearchSvc;
import ca.uhn.fhir.jpa.dao.ISearchParamRegistry;
import ca.uhn.fhir.jpa.dao.dstu3.SearchParamExtractorDstu3;
import ca.uhn.fhir.jpa.dao.dstu3.SearchParamRegistryDstu3;
import ca.uhn.fhir.jpa.interceptor.RestHookSubscriptionDstu3Interceptor;
import ca.uhn.fhir.jpa.subscription.dstu3.RestHookSubscriptionDstu3Interceptor;
import ca.uhn.fhir.jpa.provider.dstu3.TerminologyUploaderProviderDstu3;
import ca.uhn.fhir.jpa.term.HapiTerminologySvcDstu3;
import ca.uhn.fhir.jpa.term.IHapiTerminologyLoaderSvc;

5
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/dstu3/WebsocketDstu3Config.java
View File

@ -23,7 +23,6 @@ package ca.uhn.fhir.jpa.config.dstu3;
import org.springframework.beans.factory.annotation.Autowire;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import org.springframework.context.annotation.Lazy;
import org.springframework.scheduling.TaskScheduler;
import org.springframework.scheduling.concurrent.ThreadPoolTaskScheduler;
import org.springframework.stereotype.Controller;
@ -33,8 +32,8 @@ import org.springframework.web.socket.config.annotation.WebSocketConfigurer;
import org.springframework.web.socket.config.annotation.WebSocketHandlerRegistry;
import org.springframework.web.socket.handler.PerConnectionWebSocketHandler;
import ca.uhn.fhir.jpa.interceptor.WebSocketSubscriptionDstu3Interceptor;
import ca.uhn.fhir.jpa.subscription.SubscriptionWebsocketHandlerDstu3;
import ca.uhn.fhir.jpa.subscription.dstu3.WebSocketSubscriptionDstu3Interceptor;
import ca.uhn.fhir.jpa.subscription.dstu3.SubscriptionWebsocketHandlerDstu3;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;
@Configuration

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/dstu3/WebsocketDstu3DispatcherConfig.java
View File

@ -29,7 +29,7 @@ import org.springframework.context.annotation.Configuration;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSubscription;
import ca.uhn.fhir.jpa.subscription.SubscriptionWebsocketHandlerDstu3;
import ca.uhn.fhir.jpa.subscription.dstu3.SubscriptionWebsocketHandlerDstu3;
@Configuration
public class WebsocketDstu3DispatcherConfig {

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/r4/BaseR4Config.java
View File

@ -34,7 +34,7 @@ import ca.uhn.fhir.jpa.config.BaseConfig;
import ca.uhn.fhir.jpa.dao.*;
import ca.uhn.fhir.jpa.dao.r4.SearchParamExtractorR4;
import ca.uhn.fhir.jpa.dao.r4.SearchParamRegistryR4;
import ca.uhn.fhir.jpa.interceptor.r4.RestHookSubscriptionR4Interceptor;
import ca.uhn.fhir.jpa.subscription.r4.RestHookSubscriptionR4Interceptor;
import ca.uhn.fhir.jpa.provider.r4.TerminologyUploaderProviderR4;
import ca.uhn.fhir.jpa.term.*;
import ca.uhn.fhir.jpa.term.HapiTerminologySvcR4;

2
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/config/r4/WebsocketR4Config.java
View File

@ -30,7 +30,7 @@ import org.springframework.web.socket.WebSocketHandler;
import org.springframework.web.socket.config.annotation.*;
import org.springframework.web.socket.handler.PerConnectionWebSocketHandler;
import ca.uhn.fhir.jpa.interceptor.r4.WebSocketSubscriptionR4Interceptor;
import ca.uhn.fhir.jpa.subscription.r4.WebSocketSubscriptionR4Interceptor;
import ca.uhn.fhir.jpa.subscription.r4.SubscriptionWebsocketHandlerR4;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;

272
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/BaseHapiFhirResourceDao.java
View File

@ -20,26 +20,15 @@ package ca.uhn.fhir.jpa.dao;
* #L%
*/
import static org.apache.commons.lang3.StringUtils.isNotBlank;
import java.util.*;
import javax.annotation.PostConstruct;
import javax.persistence.NoResultException;
import javax.persistence.TypedQuery;
import org.apache.commons.lang3.Validate;
import org.hl7.fhir.instance.model.api.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Required;
import org.springframework.transaction.PlatformTransactionManager;
import org.springframework.transaction.annotation.Propagation;
import org.springframework.transaction.annotation.Transactional;
import ca.uhn.fhir.context.*;
import ca.uhn.fhir.jpa.dao.data.*;
import ca.uhn.fhir.context.ConfigurationException;
import ca.uhn.fhir.context.FhirVersionEnum;
import ca.uhn.fhir.context.RuntimeResourceDefinition;
import ca.uhn.fhir.context.RuntimeSearchParam;
import ca.uhn.fhir.jpa.dao.data.IResourceHistoryTableDao;
import ca.uhn.fhir.jpa.dao.data.IResourceLinkDao;
import ca.uhn.fhir.jpa.dao.data.IResourceTableDao;
import ca.uhn.fhir.jpa.dao.data.ISearchResultDao;
import ca.uhn.fhir.jpa.entity.*;
import ca.uhn.fhir.jpa.interceptor.IJpaServerInterceptor;
import ca.uhn.fhir.jpa.search.DatabaseBackedPagingProvider;
import ca.uhn.fhir.jpa.util.DeleteConflict;
import ca.uhn.fhir.jpa.util.StopWatch;
@ -47,7 +36,10 @@ import ca.uhn.fhir.jpa.util.jsonpatch.JsonPatchUtils;
import ca.uhn.fhir.jpa.util.xmlpatch.XmlPatchUtils;
import ca.uhn.fhir.model.api.*;
import ca.uhn.fhir.model.primitive.IdDt;
import ca.uhn.fhir.rest.api.*;
import ca.uhn.fhir.rest.api.PatchTypeEnum;
import ca.uhn.fhir.rest.api.QualifiedParamList;
import ca.uhn.fhir.rest.api.RestOperationTypeEnum;
import ca.uhn.fhir.rest.api.RestSearchParameterTypeEnum;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.param.ParameterUtil;
@ -56,35 +48,49 @@ import ca.uhn.fhir.rest.server.exceptions.*;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.rest.server.method.MethodUtil;
import ca.uhn.fhir.rest.server.method.SearchMethodBinding;
import ca.uhn.fhir.util.*;
import ca.uhn.fhir.util.FhirTerser;
import ca.uhn.fhir.util.ObjectUtil;
import ca.uhn.fhir.util.OperationOutcomeUtil;
import ca.uhn.fhir.util.ResourceReferenceInfo;
import org.apache.commons.lang3.Validate;
import org.hl7.fhir.instance.model.api.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Required;
import org.springframework.transaction.PlatformTransactionManager;
import org.springframework.transaction.annotation.Propagation;
import org.springframework.transaction.annotation.Transactional;
import javax.annotation.PostConstruct;
import javax.persistence.NoResultException;
import javax.persistence.TypedQuery;
import java.util.*;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
@Transactional(propagation = Propagation.REQUIRED)
public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends BaseHapiFhirDao<T> implements IFhirResourceDao<T> {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(BaseHapiFhirResourceDao.class);
@Autowired
private DaoConfig myDaoConfig;
@Autowired
protected PlatformTransactionManager myPlatformTransactionManager;
@Autowired
protected IResourceTableDao myResourceTableDao;
@Autowired(required = false)
protected IFulltextSearchSvc mySearchDao;
@Autowired()
protected ISearchResultDao mySearchResultDao;
@Autowired
private DaoConfig myDaoConfig;
@Autowired
private IResourceHistoryTableDao myResourceHistoryTableDao;
@Autowired
private IResourceLinkDao myResourceLinkDao;
private String myResourceName;
@Autowired
protected IResourceTableDao myResourceTableDao;
private Class<T> myResourceType;
@Autowired(required = false)
protected IFulltextSearchSvc mySearchDao;
@Autowired()
protected ISearchResultDao mySearchResultDao;
private String mySecondaryPrimaryKeyParamName;
@Override
public void addTag(IIdType theId, TagTypeEnum theTagType, String theScheme, String theTerm, String theLabel) {
StopWatch w = new StopWatch();
@ -94,10 +100,10 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
}
//@formatter:off
for (BaseTag next : new ArrayList<BaseTag>(entity.getTags())) {
if (ObjectUtil.equals(next.getTag().getTagType(), theTagType) &&
ObjectUtil.equals(next.getTag().getSystem(), theScheme) &&
ObjectUtil.equals(next.getTag().getCode(), theTerm)) {
for (BaseTag next : new ArrayList<>(entity.getTags())) {
if (ObjectUtil.equals(next.getTag().getTagType(), theTagType) &&
ObjectUtil.equals(next.getTag().getSystem(), theScheme) &&
ObjectUtil.equals(next.getTag().getCode(), theTerm)) {
return;
}
}
@ -113,10 +119,10 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
myEntityManager.merge(entity);
}
}
ourLog.info("Processed addTag {}/{} on {} in {}ms", new Object[] { theScheme, theTerm, theId, w.getMillisAndRestart() });
ourLog.info("Processed addTag {}/{} on {} in {}ms", new Object[]{theScheme, theTerm, theId, w.getMillisAndRestart()});
}
@Override
public DaoMethodOutcome create(final T theResource) {
return create(theResource, null, true, null);
@ -182,9 +188,9 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
T resourceToDelete = toResource(myResourceType, entity, false);
validateOkToDelete(theDeleteConflicts, entity);
preDelete(resourceToDelete, entity);
// Notify interceptors
if (theRequestDetails != null) {
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getContext(), theId.getResourceType(), theId);
@ -199,11 +205,6 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (theRequestDetails != null) {
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getContext(), theId.getResourceType(), theId);
theRequestDetails.getRequestOperationCallback().resourceDeleted(resourceToDelete);
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IJpaServerInterceptor) {
((IJpaServerInterceptor) next).resourceDeleted(requestDetails, entity);
}
}
}
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IServerOperationInterceptor) {
@ -238,7 +239,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
/**
* This method gets called by {@link #deleteByUrl(String, List, RequestDetails)} as well as by
* transaction processors
* transaction processors
*/
@Override
public DeleteMethodOutcome deleteByUrl(String theUrl, List<DeleteConflict> deleteConflicts, RequestDetails theRequestDetails) {
@ -264,7 +265,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, idToDelete.getResourceType(), idToDelete);
notifyInterceptors(RestOperationTypeEnum.DELETE, requestDetails);
}
// Perform delete
Date updateTime = new Date();
updateEntity(null, entity, updateTime, updateTime);
@ -274,11 +275,6 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (theRequestDetails != null) {
theRequestDetails.getRequestOperationCallback().resourceDeleted(resourceToDelete);
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, idToDelete.getResourceType(), idToDelete);
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IJpaServerInterceptor) {
((IJpaServerInterceptor) next).resourceDeleted(requestDetails, entity);
}
}
}
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IServerOperationInterceptor) {
@ -302,14 +298,14 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
OperationOutcomeUtil.addIssue(getContext(), oo, severity, message, null, code);
}
ourLog.info("Processed delete on {} (matched {} resource(s)) in {}ms", new Object[] { theUrl, deletedResources.size(), w.getMillis() });
ourLog.info("Processed delete on {} (matched {} resource(s)) in {}ms", new Object[]{theUrl, deletedResources.size(), w.getMillis()});
DeleteMethodOutcome retVal = new DeleteMethodOutcome();
retVal.setDeletedEntities(deletedResources);
retVal.setOperationOutcome(oo);
return retVal;
}
@Override
public DeleteMethodOutcome deleteByUrl(String theUrl, RequestDetails theRequestDetails) {
List<DeleteConflict> deleteConflicts = new ArrayList<DeleteConflict>();
@ -317,7 +313,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
DeleteMethodOutcome outcome = deleteByUrl(theUrl, deleteConflicts, theRequestDetails);
validateDeleteConflictsEmptyOrThrowException(deleteConflicts);
return outcome;
}
@ -351,7 +347,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (isNotBlank(theResource.getIdElement().getIdPart())) {
if (isValidPid(theResource.getIdElement())) {
throw new UnprocessableEntityException(
"This server cannot create an entity with a user-specified numeric ID - Client should not specify an ID when creating a new resource, or should include at least one letter in the ID to force a client-defined ID");
"This server cannot create an entity with a user-specified numeric ID - Client should not specify an ID when creating a new resource, or should include at least one letter in the ID to force a client-defined ID");
}
createForcedIdIfNeeded(entity, theResource.getIdElement());
@ -385,16 +381,11 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (!thePerformIndexing) {
incrementId(theResource, entity, theResource.getIdElement());
}
// Notify JPA interceptors
if (theRequestDetails != null) {
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getContext(), theResource);
theRequestDetails.getRequestOperationCallback().resourceCreated(theResource);
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IJpaServerInterceptor) {
((IJpaServerInterceptor) next).resourceCreated(requestDetails, entity);
}
}
}
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IServerOperationInterceptor) {
@ -418,12 +409,12 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
List<TagDefinition> tags = toTagList(theMetaAdd);
for (TagDefinition nextDef : tags) {
boolean hasTag = false;
for (BaseTag next : new ArrayList<BaseTag>(entity.getTags())) {
if (ObjectUtil.equals(next.getTag().getTagType(), nextDef.getTagType()) &&
ObjectUtil.equals(next.getTag().getSystem(), nextDef.getSystem()) &&
ObjectUtil.equals(next.getTag().getCode(), nextDef.getCode())) {
for (BaseTag next : new ArrayList<>(entity.getTags())) {
if (ObjectUtil.equals(next.getTag().getTagType(), nextDef.getTagType()) &&
ObjectUtil.equals(next.getTag().getSystem(), nextDef.getSystem()) &&
ObjectUtil.equals(next.getTag().getCode(), nextDef.getCode())) {
hasTag = true;
break;
}
@ -431,7 +422,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (!hasTag) {
entity.setHasTags(true);
TagDefinition def = getTagOrNull(nextDef.getTagType(), nextDef.getSystem(), nextDef.getCode(), nextDef.getDisplay());
if (def != null) {
BaseTag newEntity = entity.addTag(def);
@ -443,7 +434,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
}
validateMetaCount(entity.getTags().size());
myEntityManager.merge(entity);
}
@ -453,9 +444,9 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
//@formatter:off
for (TagDefinition nextDef : tags) {
for (BaseTag next : new ArrayList<BaseTag>(entity.getTags())) {
if (ObjectUtil.equals(next.getTag().getTagType(), nextDef.getTagType()) &&
ObjectUtil.equals(next.getTag().getSystem(), nextDef.getSystem()) &&
ObjectUtil.equals(next.getTag().getCode(), nextDef.getCode())) {
if (ObjectUtil.equals(next.getTag().getTagType(), nextDef.getTagType()) &&
ObjectUtil.equals(next.getTag().getSystem(), nextDef.getSystem()) &&
ObjectUtil.equals(next.getTag().getCode(), nextDef.getCode())) {
myEntityManager.remove(next);
entity.getTags().remove(next);
}
@ -482,8 +473,6 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
return tags;
}
protected abstract List<Object> getIncludeValues(FhirTerser theTerser, Include theInclude, IBaseResource theResource, RuntimeResourceDefinition theResourceDef);
public String getResourceName() {
return myResourceName;
}
@ -493,6 +482,12 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
return myResourceType;
}
@SuppressWarnings("unchecked")
@Required
public void setResourceType(Class<? extends IBaseResource> theTableType) {
myResourceType = (Class<T>) theTableType;
}
@Override
public TagList getTags(IIdType theResourceId, RequestDetails theRequestDetails) {
// Notify interceptors
@ -535,17 +530,16 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
}
private void incrementId(T theResource, ResourceTable theSavedEntity, IIdType theResourceId) {
IIdType idType = theResourceId;
String newVersion;
long newVersionLong;
if (idType == null || idType.getVersionIdPart() == null) {
if (theResourceId == null || theResourceId.getVersionIdPart() == null) {
newVersion = "1";
newVersionLong = 1;
} else {
newVersionLong = idType.getVersionIdPartAsLong() + 1;
newVersionLong = theResourceId.getVersionIdPartAsLong() + 1;
newVersion = Long.toString(newVersionLong);
}
IIdType newId = theResourceId.withVersion(newVersion);
theResource.getIdElement().setValue(newId.getValue());
theSavedEntity.setVersion(newVersionLong);
@ -568,7 +562,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getResourceName(), theResourceId);
notifyInterceptors(RestOperationTypeEnum.META_ADD, requestDetails);
}
StopWatch w = new StopWatch();
BaseHasResource entity = readEntity(theResourceId);
if (entity == null) {
@ -586,14 +580,13 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
doMetaAdd(theMetaAdd, history);
}
ourLog.info("Processed metaAddOperation on {} in {}ms", new Object[] { theResourceId, w.getMillisAndRestart() });
ourLog.info("Processed metaAddOperation on {} in {}ms", new Object[]{theResourceId, w.getMillisAndRestart()});
@SuppressWarnings("unchecked")
MT retVal = (MT) metaGetOperation(theMetaAdd.getClass(), theResourceId, theRequestDetails);
return retVal;
}
@Override
public <MT extends IBaseMetaType> MT metaDeleteOperation(IIdType theResourceId, MT theMetaDel, RequestDetails theRequestDetails) {
// Notify interceptors
@ -601,7 +594,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getResourceName(), theResourceId);
notifyInterceptors(RestOperationTypeEnum.META_DELETE, requestDetails);
}
StopWatch w = new StopWatch();
BaseHasResource entity = readEntity(theResourceId);
if (entity == null) {
@ -621,7 +614,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
myEntityManager.flush();
ourLog.info("Processed metaDeleteOperation on {} in {}ms", new Object[] { theResourceId.getValue(), w.getMillisAndRestart() });
ourLog.info("Processed metaDeleteOperation on {} in {}ms", new Object[]{theResourceId.getValue(), w.getMillisAndRestart()});
@SuppressWarnings("unchecked")
MT retVal = (MT) metaGetOperation(theMetaDel.getClass(), theResourceId, theRequestDetails);
@ -635,7 +628,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getResourceName(), theId);
notifyInterceptors(RestOperationTypeEnum.META, requestDetails);
}
Set<TagDefinition> tagDefs = new HashSet<TagDefinition>();
BaseHasResource entity = readEntity(theId);
for (BaseTag next : entity.getTags()) {
@ -656,7 +649,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getResourceName(), null);
notifyInterceptors(RestOperationTypeEnum.META, requestDetails);
}
String sql = "SELECT d FROM TagDefinition d WHERE d.myId IN (SELECT DISTINCT t.myTagId FROM ResourceTag t WHERE t.myResourceType = :res_type)";
TypedQuery<TagDefinition> q = myEntityManager.createQuery(sql, TagDefinition.class);
q.setParameter("res_type", myResourceName);
@ -675,9 +668,9 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
throw new ResourceVersionConflictException("Version " + theId.getVersionIdPart() + " is not the most recent version of this resource, unable to apply patch");
}
}
validateResourceType(entityToUpdate);
IBaseResource resourceToUpdate = toResource(entityToUpdate, false);
IBaseResource destination;
if (thePatchType == PatchTypeEnum.JSON_PATCH) {
@ -685,7 +678,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
} else {
destination = XmlPatchUtils.apply(getContext(), resourceToUpdate, thePatchBody);
}
@SuppressWarnings("unchecked")
T destinationCasted = (T) destination;
return update(destinationCasted, null, true, theRequestDetails);
@ -710,7 +703,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
/**
* Subclasses may override to provide behaviour. Invoked within a delete
* transaction with the resource that is about to be deleted.
* transaction with the resource that is about to be deleted.
*/
protected void preDelete(T theResourceToDelete, ResourceTable theEntityToDelete) {
// nothing by default
@ -718,9 +711,8 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
/**
* May be overridden by subclasses to validate resources prior to storage
*
* @param theResource
* The resource that is about to be stored
*
* @param theResource The resource that is about to be stored
*/
protected void preProcessResourceForStorage(T theResource) {
String type = getContext().getResourceDefinition(theResource).getName();
@ -825,7 +817,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (entity == null) {
if (theId.hasVersionIdPart()) {
TypedQuery<ResourceHistoryTable> q = myEntityManager
.createQuery("SELECT t from ResourceHistoryTable t WHERE t.myResourceId = :RID AND t.myResourceType = :RTYP AND t.myResourceVersion = :RVER", ResourceHistoryTable.class);
.createQuery("SELECT t from ResourceHistoryTable t WHERE t.myResourceId = :RID AND t.myResourceType = :RTYP AND t.myResourceVersion = :RVER", ResourceHistoryTable.class);
q.setParameter("RID", pid);
q.setParameter("RTYP", myResourceName);
q.setParameter("RVER", theId.getVersionIdPartAsLong());
@ -859,7 +851,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ourLog.debug("Indexing resource {} - PID {}", theResource.getIdElement().getValue(), theEntity.getId());
updateEntity(theResource, theEntity, null, true, false, theEntity.getUpdatedDate(), true, false);
}
@Override
public void removeTag(IIdType theId, TagTypeEnum theTagType, String theScheme, String theTerm) {
removeTag(theId, theTagType, theScheme, theTerm, null);
@ -872,7 +864,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getResourceName(), theId);
notifyInterceptors(RestOperationTypeEnum.DELETE_TAGS, requestDetails);
}
StopWatch w = new StopWatch();
BaseHasResource entity = readEntity(theId);
if (entity == null) {
@ -881,9 +873,9 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
//@formatter:off
for (BaseTag next : new ArrayList<BaseTag>(entity.getTags())) {
if (ObjectUtil.equals(next.getTag().getTagType(), theTagType) &&
ObjectUtil.equals(next.getTag().getSystem(), theScheme) &&
ObjectUtil.equals(next.getTag().getCode(), theTerm)) {
if (ObjectUtil.equals(next.getTag().getTagType(), theTagType) &&
ObjectUtil.equals(next.getTag().getSystem(), theScheme) &&
ObjectUtil.equals(next.getTag().getCode(), theTerm)) {
myEntityManager.remove(next);
entity.getTags().remove(next);
}
@ -896,25 +888,25 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
myEntityManager.merge(entity);
ourLog.info("Processed remove tag {}/{} on {} in {}ms", new Object[] { theScheme, theTerm, theId.getValue(), w.getMillisAndRestart() });
ourLog.info("Processed remove tag {}/{} on {} in {}ms", new Object[]{theScheme, theTerm, theId.getValue(), w.getMillisAndRestart()});
}
@Transactional(propagation=Propagation.SUPPORTS)
@Transactional(propagation = Propagation.SUPPORTS)
@Override
public IBundleProvider search(final SearchParameterMap theParams) {
return search(theParams, null);
}
@Transactional(propagation=Propagation.SUPPORTS)
@Transactional(propagation = Propagation.SUPPORTS)
@Override
public IBundleProvider search(final SearchParameterMap theParams, RequestDetails theRequestDetails) {
// Notify interceptors
if (theRequestDetails != null) {
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, getContext(), getResourceName(), null);
notifyInterceptors(RestOperationTypeEnum.SEARCH_TYPE, requestDetails);
if (theRequestDetails.isSubRequest()) {
Integer max = myDaoConfig.getMaximumSearchResultCountInTransaction();
Integer max = myDaoConfig.getMaximumSearchResultCountInTransaction();
if (max != null) {
Validate.inclusiveBetween(1, Integer.MAX_VALUE, max.intValue(), "Maximum search result count in transaction ust be a positive integer");
theParams.setLoadSynchronousUpTo(myDaoConfig.getMaximumSearchResultCountInTransaction());
@ -925,7 +917,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
theParams.setLoadSynchronous(true);
}
}
return mySearchCoordinatorSvc.registerSearch(this, theParams, getResourceName());
}
@ -936,22 +928,16 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
builder.setType(getResourceType(), getResourceName());
// FIXME: fail if too many results
HashSet<Long> retVal = new HashSet<Long>();
String uuid = UUID.randomUUID().toString();
Iterator<Long> iter = builder.createQuery(theParams, uuid);
while (iter.hasNext()) {
retVal.add(iter.next());
}
return retVal;
}
@SuppressWarnings("unchecked")
@Required
public void setResourceType(Class<? extends IBaseResource> theTableType) {
myResourceType = (Class<T>) theTableType;
return retVal;
}
/**
@ -970,15 +956,15 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
}
for (TagDefinition next : tagDefinitions) {
switch (next.getTagType()) {
case PROFILE:
retVal.addProfile(next.getCode());
break;
case SECURITY_LABEL:
retVal.addSecurity().setSystem(next.getSystem()).setCode(next.getCode()).setDisplay(next.getDisplay());
break;
case TAG:
retVal.addTag().setSystem(next.getSystem()).setCode(next.getCode()).setDisplay(next.getDisplay());
break;
case PROFILE:
retVal.addProfile(next.getCode());
break;
case SECURITY_LABEL:
retVal.addSecurity().setSystem(next.getSystem()).setCode(next.getCode()).setDisplay(next.getDisplay());
break;
case TAG:
retVal.addTag().setSystem(next.getSystem()).setCode(next.getCode()).setDisplay(next.getDisplay());
break;
}
}
return retVal;
@ -1028,15 +1014,15 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
return retVal;
}
@Transactional(propagation=Propagation.SUPPORTS)
@Transactional(propagation = Propagation.SUPPORTS)
@Override
public void translateRawParameters(Map<String, List<String>> theSource, SearchParameterMap theTarget) {
if (theSource == null || theSource.isEmpty()) {
return;
}
Map<String, RuntimeSearchParam> searchParams = mySerarchParamRegistry.getActiveSearchParams(getResourceName());
Set<String> paramNames = theSource.keySet();
for (String nextParamName : paramNames) {
QualifierDetails qualifiedParamName = SearchMethodBinding.extractQualifiersFromParameterName(nextParamName);
@ -1058,7 +1044,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
theTarget.add(qualifiedParamName.getParamName(), parsedParam);
}
}
}
}
@ -1109,7 +1095,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
} catch (ResourceNotFoundException e) {
if (resourceId.isIdPartValidLong()) {
throw new InvalidRequestException(
getContext().getLocalizer().getMessage(BaseHapiFhirResourceDao.class, "failedToCreateWithClientAssignedNumericId", theResource.getIdElement().getIdPart()));
getContext().getLocalizer().getMessage(BaseHapiFhirResourceDao.class, "failedToCreateWithClientAssignedNumericId", theResource.getIdElement().getIdPart()));
}
return doCreate(theResource, null, thePerformIndexing, new Date(), theRequestDetails);
}
@ -1121,7 +1107,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (resourceId.hasResourceType() && !resourceId.getResourceType().equals(getResourceName())) {
throw new UnprocessableEntityException(
"Invalid resource ID[" + entity.getIdDt().toUnqualifiedVersionless() + "] of type[" + entity.getResourceType() + "] - Does not match expected [" + getResourceName() + "]");
"Invalid resource ID[" + entity.getIdDt().toUnqualifiedVersionless() + "] of type[" + entity.getResourceType() + "] - Does not match expected [" + getResourceName() + "]");
}
// Notify interceptors
@ -1132,7 +1118,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
}
IBaseResource oldResource = toResource(entity, false);
// Perform update
ResourceTable savedEntity = updateEntity(theResource, entity, null, thePerformIndexing, thePerformIndexing, new Date(), theForceUpdateVersion, thePerformIndexing);
@ -1152,11 +1138,6 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
if (theRequestDetails != null) {
theRequestDetails.getRequestOperationCallback().resourceUpdated(theResource);
theRequestDetails.getRequestOperationCallback().resourceUpdated(oldResource, theResource);
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IJpaServerInterceptor) {
((IJpaServerInterceptor) next).resourceUpdated(requestDetails, entity);
}
}
}
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IServerOperationInterceptor) {
@ -1164,21 +1145,21 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
((IServerOperationInterceptor) next).resourceUpdated(theRequestDetails, oldResource, theResource);
}
}
DaoMethodOutcome outcome = toMethodOutcome(savedEntity, theResource).setCreated(false);
if (!thePerformIndexing) {
outcome.setId(theResource.getIdElement());
}
String msg = getContext().getLocalizer().getMessage(BaseHapiFhirResourceDao.class, "successfulCreate", outcome.getId(), w.getMillisAndRestart());
outcome.setOperationOutcome(createInfoOperationOutcome(msg));
ourLog.info(msg);
return outcome;
}
@Override
public DaoMethodOutcome update(T theResource, String theMatchUrl, boolean thePerformIndexing, RequestDetails theRequestDetails) {
return update(theResource, theMatchUrl, thePerformIndexing, false, theRequestDetails);
@ -1191,18 +1172,19 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
/**
* Get the resource definition from the criteria which specifies the resource type
*
* @param criteria
* @return
*/
@Override
public RuntimeResourceDefinition validateCriteriaAndReturnResourceDefinition(String criteria) {
String resourceName;
if(criteria == null || criteria.trim().isEmpty()){
if (criteria == null || criteria.trim().isEmpty()) {
throw new IllegalArgumentException("Criteria cannot be empty");
}
if(criteria.contains("?")){
if (criteria.contains("?")) {
resourceName = criteria.substring(0, criteria.indexOf("?"));
}else{
} else {
resourceName = criteria;
}
@ -1220,7 +1202,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
}
}
}
protected void validateOkToDelete(List<DeleteConflict> theDeleteConflicts, ResourceTable theEntity) {
TypedQuery<ResourceLink> query = myEntityManager.createQuery("SELECT l FROM ResourceLink l WHERE l.myTargetResourcePid = :target_pid", ResourceLink.class);
query.setParameter("target_pid", theEntity.getId());
@ -1235,7 +1217,7 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
myResourceLinkDao.delete(resultList);
return;
}
ResourceLink link = resultList.get(0);
IdDt targetId = theEntity.getIdDt();
IdDt sourceId = link.getSourceResource().getIdDt();

18
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/FhirResourceDaoDstu2.java
View File

@ -56,24 +56,6 @@ public class FhirResourceDaoDstu2<T extends IResource> extends BaseHapiFhirResou
@Qualifier("myInstanceValidatorDstu2")
private IValidatorModule myInstanceValidator;
@Override
protected List<Object> getIncludeValues(FhirTerser theTerser, Include theInclude, IBaseResource theResource, RuntimeResourceDefinition theResourceDef) {
List<Object> values;
if ("*".equals(theInclude.getValue())) {
values = new ArrayList<Object>();
values.addAll(theTerser.getAllPopulatedChildElementsOfType(theResource, BaseResourceReferenceDt.class));
} else if (theInclude.getValue().startsWith(theResourceDef.getName() + ":")) {
values = new ArrayList<Object>();
String paramName = theInclude.getValue().substring(theInclude.getValue().indexOf(':') + 1);
RuntimeSearchParam sp = getSearchParamByName(theResourceDef, paramName);
for (String nextPath : sp.getPathsSplit()) {
values.addAll(theTerser.getValues(theResource, nextPath));
}
} else {
values = Collections.emptyList();
}
return values;
}
@Override
protected IBaseOperationOutcome createOperationOutcome(String theSeverity, String theMessage, String theCode) {

10
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/data/ISubscriptionTableDao.java
View File

@ -33,19 +33,19 @@ import ca.uhn.fhir.jpa.entity.SubscriptionTable;
public interface ISubscriptionTableDao extends JpaRepository<SubscriptionTable, Long> {
@Query("SELECT t FROM SubscriptionTable t WHERE t.myResId = :pid")
public SubscriptionTable findOneByResourcePid(@Param("pid") Long theId);
SubscriptionTable findOneByResourcePid(@Param("pid") Long theId);
@Modifying
@Query("DELETE FROM SubscriptionTable t WHERE t.myId = :id ")
public void deleteAllForSubscription(@Param("id") Long theSubscriptionId);
void deleteAllForSubscription(@Param("id") Long theSubscriptionId);
@Modifying
@Query("UPDATE SubscriptionTable t SET t.myLastClientPoll = :last_client_poll")
public int updateLastClientPoll(@Param("last_client_poll") Date theLastClientPoll);
int updateLastClientPoll(@Param("last_client_poll") Date theLastClientPoll);
@Query("SELECT t FROM SubscriptionTable t WHERE t.myLastClientPoll < :cutoff OR (t.myLastClientPoll IS NULL AND t.myCreated < :cutoff)")
public Collection<SubscriptionTable> findInactiveBeforeCutoff(@Param("cutoff") Date theCutoff);
Collection<SubscriptionTable> findInactiveBeforeCutoff(@Param("cutoff") Date theCutoff);
@Query("SELECT t.myId FROM SubscriptionTable t WHERE t.myStatus = :status AND t.myNextCheck <= :next_check")
public Collection<Long> findSubscriptionsWhichNeedToBeChecked(@Param("status") String theStatus, @Param("next_check") Date theNextCheck);
Collection<Long> findSubscriptionsWhichNeedToBeChecked(@Param("status") String theStatus, @Param("next_check") Date theNextCheck);
}

18
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoDstu3.java
View File

@ -70,24 +70,6 @@ public class FhirResourceDaoDstu3<T extends IAnyResource> extends BaseHapiFhirRe
return oo;
}
@Override
protected List<Object> getIncludeValues(FhirTerser theTerser, Include theInclude, IBaseResource theResource, RuntimeResourceDefinition theResourceDef) {
List<Object> values;
if ("*".equals(theInclude.getValue())) {
values = new ArrayList<Object>();
values.addAll(theTerser.getAllPopulatedChildElementsOfType(theResource, BaseResourceReferenceDt.class));
} else if (theInclude.getValue().startsWith(theResourceDef.getName() + ":")) {
values = new ArrayList<Object>();
String paramName = theInclude.getValue().substring(theInclude.getValue().indexOf(':') + 1);
RuntimeSearchParam sp = getSearchParamByName(theResourceDef, paramName);
for (String nextPath : sp.getPathsSplit()) {
values.addAll(theTerser.getValues(theResource, nextPath));
}
} else {
values = Collections.emptyList();
}
return values;
}
@Override
public MethodOutcome validate(T theResource, IIdType theId, String theRawResource, EncodingEnum theEncoding, ValidationModeEnum theMode, String theProfile, RequestDetails theRequestDetails) {

18
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r4/FhirResourceDaoR4.java
View File

@ -70,24 +70,6 @@ public class FhirResourceDaoR4<T extends IAnyResource> extends BaseHapiFhirResou
return oo;
}
@Override
protected List<Object> getIncludeValues(FhirTerser theTerser, Include theInclude, IBaseResource theResource, RuntimeResourceDefinition theResourceDef) {
List<Object> values;
if ("*".equals(theInclude.getValue())) {
values = new ArrayList<Object>();
values.addAll(theTerser.getAllPopulatedChildElementsOfType(theResource, BaseResourceReferenceDt.class));
} else if (theInclude.getValue().startsWith(theResourceDef.getName() + ":")) {
values = new ArrayList<Object>();
String paramName = theInclude.getValue().substring(theInclude.getValue().indexOf(':') + 1);
RuntimeSearchParam sp = getSearchParamByName(theResourceDef, paramName);
for (String nextPath : sp.getPathsSplit()) {
values.addAll(theTerser.getValues(theResource, nextPath));
}
} else {
values = Collections.emptyList();
}
return values;
}
@Override
public MethodOutcome validate(T theResource, IIdType theId, String theRawResource, EncodingEnum theEncoding, ValidationModeEnum theMode, String theProfile, RequestDetails theRequestDetails) {

45
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/entity/SubscriptionFlaggedResource.java
View File

@ -20,64 +20,53 @@ package ca.uhn.fhir.jpa.entity;
* #L%
*/
import javax.persistence.Column;
import javax.persistence.Entity;
import javax.persistence.ForeignKey;
import javax.persistence.GeneratedValue;
import javax.persistence.GenerationType;
import javax.persistence.Id;
import javax.persistence.JoinColumn;
import javax.persistence.ManyToOne;
import javax.persistence.SequenceGenerator;
import javax.persistence.Table;
import javax.persistence.*;
@Entity
@Table(name = "HFJ_SUBSCRIPTION_FLAG_RES")
public class SubscriptionFlaggedResource {
@Id
@GeneratedValue(strategy = GenerationType.AUTO, generator="SEQ_SUBSCRIPTION_FLAG_ID")
@GeneratedValue(strategy = GenerationType.AUTO, generator = "SEQ_SUBSCRIPTION_FLAG_ID")
@SequenceGenerator(name = "SEQ_SUBSCRIPTION_FLAG_ID", sequenceName = "SEQ_SUBSCRIPTION_FLAG_ID")
@Column(name = "PID", insertable = false, updatable = false)
private Long myId;
@ManyToOne()
@JoinColumn(name="RES_ID", nullable=false, foreignKey=@ForeignKey(name="FK_SUBSFLAGRES_RES"))
@JoinColumn(name = "RES_ID", nullable = false, foreignKey = @ForeignKey(name = "FK_SUBSFLAGRES_RES"))
private ResourceTable myResource;
//@formatter:off
@ManyToOne()
@JoinColumn(name="SUBSCRIPTION_ID",
foreignKey=@ForeignKey(name="FK_SUBSFLAG_SUBS")
@JoinColumn(name = "SUBSCRIPTION_ID",
foreignKey = @ForeignKey(name = "FK_SUBSFLAG_SUBS")
)
private SubscriptionTable mySubscription;
//@formatter:om
@Column(name="RES_VERSION", nullable=false)
@Column(name = "RES_VERSION", nullable = false)
private Long myVersion;
public ResourceTable getResource() {
return myResource;
}
public SubscriptionTable getSubscription() {
return mySubscription;
}
public Long getVersion() {
return myVersion;
}
public void setResource(ResourceTable theResource) {
myResource = theResource;
}
public SubscriptionTable getSubscription() {
return mySubscription;
}
public void setSubscription(SubscriptionTable theSubscription) {
mySubscription = theSubscription;
}
public Long getVersion() {
return myVersion;
}
public void setVersion(Long theVersion) {
myVersion = theVersion;
}
}

9
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/entity/SubscriptionTable.java
View File

@ -87,13 +87,18 @@ public class SubscriptionTable {
@Column(name = "SUBSCRIPTION_STATUS", nullable = false, length = 20)
private String myStatus;
//@formatter:off
@OneToOne()
@JoinColumn(name = "RES_ID", insertable = true, updatable = false, referencedColumnName = "RES_ID",
foreignKey = @ForeignKey(name = "FK_SUBSCRIPTION_RESOURCE_ID")
)
private ResourceTable mySubscriptionResource;
//@formatter:on
/**
* Constructor
*/
public SubscriptionTable(){
super();
}
public long getCheckInterval() {
return myCheckInterval;

89
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/BaseRestHookSubscriptionInterceptor.java
View File

@ -1,89 +0,0 @@
package ca.uhn.fhir.jpa.interceptor;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import ca.uhn.fhir.context.RuntimeResourceDefinition;
import ca.uhn.fhir.jpa.dao.*;
import ca.uhn.fhir.jpa.provider.ServletSubRequestDetails;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
public abstract class BaseRestHookSubscriptionInterceptor extends ServerOperationInterceptorAdapter {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(BaseRestHookSubscriptionInterceptor.class);
protected static final Integer MAX_SUBSCRIPTION_RESULTS = 10000;
protected abstract IFhirResourceDao<?> getSubscriptionDao();
protected void checkSubscriptionCriterias(String theCriteria) {
try {
IBundleProvider results = executeSubscriptionCriteria(theCriteria, null);
} catch (Exception e) {
ourLog.warn("Invalid criteria when creating subscription", e);
throw new InvalidRequestException("Invalid criteria: " + e.getMessage());
}
}
private IBundleProvider executeSubscriptionCriteria(String theCriteria, IIdType idType) {
String criteria = theCriteria;
/*
* Run the subscriptions query and look for matches, add the id as part of the criteria
* to avoid getting matches of previous resources rather than the recent resource
*/
if (idType != null) {
criteria += "&_id=" + idType.getResourceType() + "/" + idType.getIdPart();
}
IBundleProvider results = getBundleProvider(criteria, true);
return results;
}
/**
* Search based on a query criteria
*
* @param theCheckOnly Is this just a test that the search works
*/
protected IBundleProvider getBundleProvider(String theCriteria, boolean theCheckOnly) {
RuntimeResourceDefinition responseResourceDef = getSubscriptionDao().validateCriteriaAndReturnResourceDefinition(theCriteria);
SearchParameterMap responseCriteriaUrl = BaseHapiFhirDao.translateMatchUrl(getSubscriptionDao(), getSubscriptionDao().getContext(), theCriteria, responseResourceDef);
RequestDetails req = new ServletSubRequestDetails();
req.setSubRequest(true);
IFhirResourceDao<? extends IBaseResource> responseDao = getSubscriptionDao().getDao(responseResourceDef.getImplementingClass());
if (theCheckOnly) {
responseCriteriaUrl.setLoadSynchronousUpTo(1);
} else {
responseCriteriaUrl.setLoadSynchronousUpTo(MAX_SUBSCRIPTION_RESULTS);
}
IBundleProvider responseResults = responseDao.search(responseCriteriaUrl, req);
return responseResults;
}
}

88
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/IJpaServerInterceptor.java
View File

@ -1,88 +0,0 @@
package ca.uhn.fhir.jpa.interceptor;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.rest.server.exceptions.BaseServerResponseException;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
/*
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
/**
* Server interceptor for JPA DAOs which adds methods that will be called at certain points
* in the operation lifecycle for JPA operations.
*
* @deprecated Use {@link IServerOperationInterceptor instead}. Deprecated since HAPI FHIR 2.3
*/
@Deprecated
public interface IJpaServerInterceptor extends IServerInterceptor {
/**
* This method is invoked by the JPA DAOs when a resource has been newly created in the database.
* It will be invoked within the current transaction scope.
* <p>
* This method is called within the server database transaction, after the
* entity has been persisted and flushed to the database. It may not be a good
* candidate for security decisions depending on how your database is set up.
* Any exceptions thrown by this method will result in the transaction being
* rolled back. Thrown exceptions should be of a type which
* subclasses {@link BaseServerResponseException}.
* </p>
*
* @param theDetails The request details
* @param theResourceTable The actual created entity
*/
void resourceCreated(ActionRequestDetails theDetails, ResourceTable theResourceTable);
/**
* This method is invoked by the JPA DAOs when a resource has been updated in the database.
* It will be invoked within the current transaction scope.
* <p>
* This method is called within the server database transaction, after the
* entity has been persisted and flushed to the database. It may not be a good
* candidate for security decisions depending on how your database is set up.
* Any exceptions thrown by this method will result in the transaction being
* rolled back. Thrown exceptions should be of a type which
* subclasses {@link BaseServerResponseException}.
* </p>
*
* @param theDetails The request details
* @param theResourceTable The actual updated entity
*/
void resourceUpdated(ActionRequestDetails theDetails, ResourceTable theResourceTable);
/**
* This method is invoked by the JPA DAOs when a resource has been updated in the database.
* It will be invoked within the current transaction scope.
* <p>
* This method is called within the server database transaction, after the
* entity has been persisted and flushed to the database. It may not be a good
* candidate for security decisions depending on how your database is set up.
* Any exceptions thrown by this method will result in the transaction being
* rolled back. Thrown exceptions should be of a type which
* subclasses {@link BaseServerResponseException}.
* </p>
*
* @param theDetails The request details
* @param theResourceTable The actual updated entity
*/
void resourceDeleted(ActionRequestDetails theDetails, ResourceTable theResourceTable);
}

43
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/JpaServerInterceptorAdapter.java
View File

@ -1,43 +0,0 @@
package ca.uhn.fhir.jpa.interceptor;
/*
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.rest.server.interceptor.InterceptorAdapter;
public class JpaServerInterceptorAdapter extends InterceptorAdapter implements IJpaServerInterceptor {
@Override
public void resourceCreated(ActionRequestDetails theDetails, ResourceTable theResourceTable) {
// nothing
}
@Override
public void resourceUpdated(ActionRequestDetails theDetails, ResourceTable theResourceTable) {
// nothing
}
@Override
public void resourceDeleted(ActionRequestDetails theDetails, ResourceTable theResourceTable) {
// nothing
}
}

93
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/WebSocketSubscriptionDstu2Interceptor.java
View File

@ -1,93 +0,0 @@
package ca.uhn.fhir.jpa.interceptor;
import javax.annotation.PostConstruct;
import javax.servlet.http.HttpServletRequest;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSubscription;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.model.dstu2.resource.Subscription;
import ca.uhn.fhir.rest.api.RequestTypeEnum;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.InterceptorAdapter;
public class WebSocketSubscriptionDstu2Interceptor extends InterceptorAdapter implements IJpaServerInterceptor {
private static final Logger logger = LoggerFactory.getLogger(WebSocketSubscriptionDstu2Interceptor.class);
@Autowired
@Qualifier("mySubscriptionDaoDstu2")
private IFhirResourceDao<Subscription> reference;
private IFhirResourceDaoSubscription<Subscription> casted;
@PostConstruct
public void postConstruct(){
casted = (IFhirResourceDaoSubscription) reference;
}
@Override
public void resourceCreated(ActionRequestDetails theDetails, ResourceTable theResourceTable) {
}
@Override
public void resourceUpdated(ActionRequestDetails theDetails, ResourceTable theResourceTable) {
}
@Override
public void resourceDeleted(ActionRequestDetails theDetails, ResourceTable theResourceTable) {
}
/**
* Checks for websocket subscriptions
* @param theRequestDetails
* A bean containing details about the request that is about to be processed, including details such as the
* resource type and logical ID (if any) and other FHIR-specific aspects of the request which have been
* pulled out of the {@link HttpServletRequest servlet request}.
* @param theResponseObject
* The actual object which is being streamed to the client as a response
* @return
*/
@Override
public boolean outgoingResponse(RequestDetails theRequestDetails, IBaseResource theResponseObject) {
if (theRequestDetails.getResourceName() == null ||
theRequestDetails.getResourceName().isEmpty() ||
theRequestDetails.getResourceName().equals("Subscription")) {
return super.outgoingResponse(theRequestDetails, theResponseObject);
}
if (theRequestDetails.getRequestType().equals(RequestTypeEnum.POST) || theRequestDetails.getRequestType().equals(RequestTypeEnum.PUT)) {
logger.info("Found POST or PUT for a non-subscription resource");
casted.pollForNewUndeliveredResources(theRequestDetails.getResourceName());
}
return super.outgoingResponse(theRequestDetails, theResponseObject);
}
}

107
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/WebSocketSubscriptionDstu3Interceptor.java
View File

@ -1,107 +0,0 @@
package ca.uhn.fhir.jpa.interceptor;
import javax.annotation.PostConstruct;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.hl7.fhir.dstu3.model.Subscription;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSubscription;
import ca.uhn.fhir.rest.api.RequestTypeEnum;
import ca.uhn.fhir.rest.api.RestOperationTypeEnum;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.AuthenticationException;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
public class WebSocketSubscriptionDstu3Interceptor extends ServerOperationInterceptorAdapter {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(WebSocketSubscriptionDstu3Interceptor.class);
private IFhirResourceDaoSubscription<Subscription> mySubscriptionDaoCasted;
@Autowired
@Qualifier("mySubscriptionDaoDstu3")
private IFhirResourceDao<Subscription> mySubscriptionDao;
@Override
public boolean incomingRequestPostProcessed(RequestDetails theRequestDetails, HttpServletRequest theRequest, HttpServletResponse theResponse) throws AuthenticationException {
if (theRequestDetails.getRestOperationType().equals(RestOperationTypeEnum.DELETE)) {
mySubscriptionDaoCasted.pollForNewUndeliveredResources(theRequestDetails.getResourceName());
}
return super.incomingRequestPostProcessed(theRequestDetails, theRequest, theResponse);
}
/**
* Checks for websocket subscriptions
*
* @param theRequestDetails
* A bean containing details about the request that is about to be processed, including details such as the
* resource type and logical ID (if any) and other FHIR-specific aspects of the request which have been
* pulled out of the {@link HttpServletRequest servlet request}.
* @param theResponseObject
* The actual object which is being streamed to the client as a response
* @return
*/
@Override
public boolean outgoingResponse(RequestDetails theRequestDetails, IBaseResource theResponseObject) {
if (theRequestDetails.getResourceName() == null ||
theRequestDetails.getResourceName().isEmpty() ||
theRequestDetails.getResourceName().equals("Subscription")) {
return super.outgoingResponse(theRequestDetails, theResponseObject);
}
if (theRequestDetails.getRequestType().equals(RequestTypeEnum.POST) || theRequestDetails.getRequestType().equals(RequestTypeEnum.PUT)) {
ourLog.info("Found POST or PUT for a non-subscription resource");
mySubscriptionDaoCasted.pollForNewUndeliveredResources(theRequestDetails.getResourceName());
}
return super.outgoingResponse(theRequestDetails, theResponseObject);
}
@SuppressWarnings({ "rawtypes", "unchecked" })
@PostConstruct
public void postConstruct() {
mySubscriptionDaoCasted = (IFhirResourceDaoSubscription) mySubscriptionDao;
}
@Override
public void resourceCreated(RequestDetails theRequest, IBaseResource theResource) {
// nothing
}
@Override
public void resourceDeleted(RequestDetails theRequest, IBaseResource theResource) {
// nothing
}
@Override
public void resourceUpdated(RequestDetails theRequest, IBaseResource theOldResource, IBaseResource theNewResource) {
// nothing
}
}

107
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/r4/WebSocketSubscriptionR4Interceptor.java
View File

@ -1,107 +0,0 @@
package ca.uhn.fhir.jpa.interceptor.r4;
import javax.annotation.PostConstruct;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.hl7.fhir.r4.model.Subscription;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSubscription;
import ca.uhn.fhir.rest.api.RequestTypeEnum;
import ca.uhn.fhir.rest.api.RestOperationTypeEnum;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.AuthenticationException;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
public class WebSocketSubscriptionR4Interceptor extends ServerOperationInterceptorAdapter {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(WebSocketSubscriptionR4Interceptor.class);
private IFhirResourceDaoSubscription<Subscription> mySubscriptionDaoCasted;
@Autowired
@Qualifier("mySubscriptionDaoR4")
private IFhirResourceDao<Subscription> mySubscriptionDao;
@Override
public boolean incomingRequestPostProcessed(RequestDetails theRequestDetails, HttpServletRequest theRequest, HttpServletResponse theResponse) throws AuthenticationException {
if (theRequestDetails.getRestOperationType().equals(RestOperationTypeEnum.DELETE)) {
mySubscriptionDaoCasted.pollForNewUndeliveredResources(theRequestDetails.getResourceName());
}
return super.incomingRequestPostProcessed(theRequestDetails, theRequest, theResponse);
}
/**
* Checks for websocket subscriptions
*
* @param theRequestDetails
* A bean containing details about the request that is about to be processed, including details such as the
* resource type and logical ID (if any) and other FHIR-specific aspects of the request which have been
* pulled out of the {@link HttpServletRequest servlet request}.
* @param theResponseObject
* The actual object which is being streamed to the client as a response
* @return
*/
@Override
public boolean outgoingResponse(RequestDetails theRequestDetails, IBaseResource theResponseObject) {
if (theRequestDetails.getResourceName() == null ||
theRequestDetails.getResourceName().isEmpty() ||
theRequestDetails.getResourceName().equals("Subscription")) {
return super.outgoingResponse(theRequestDetails, theResponseObject);
}
if (theRequestDetails.getRequestType().equals(RequestTypeEnum.POST) || theRequestDetails.getRequestType().equals(RequestTypeEnum.PUT)) {
ourLog.info("Found POST or PUT for a non-subscription resource");
mySubscriptionDaoCasted.pollForNewUndeliveredResources(theRequestDetails.getResourceName());
}
return super.outgoingResponse(theRequestDetails, theResponseObject);
}
@SuppressWarnings({ "rawtypes", "unchecked" })
@PostConstruct
public void postConstruct() {
mySubscriptionDaoCasted = (IFhirResourceDaoSubscription) mySubscriptionDao;
}
@Override
public void resourceCreated(RequestDetails theRequest, IBaseResource theResource) {
// nothing
}
@Override
public void resourceDeleted(RequestDetails theRequest, IBaseResource theResource) {
// nothing
}
@Override
public void resourceUpdated(RequestDetails theRequest, IBaseResource theOldResource, IBaseResource theNewResource) {
// nothing
}
}

41
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/BaseSubscriptionInterceptor.java
View File

@ -18,6 +18,8 @@ import org.springframework.messaging.SubscribableChannel;
import org.springframework.messaging.support.ExecutorSubscribableChannel;
import org.springframework.messaging.support.GenericMessage;
import org.springframework.scheduling.annotation.Scheduled;
import org.springframework.transaction.support.TransactionSynchronizationAdapter;
import org.springframework.transaction.support.TransactionSynchronizationManager;
import javax.annotation.PostConstruct;
import javax.annotation.PreDestroy;
@ -40,9 +42,12 @@ public abstract class BaseSubscriptionInterceptor extends ServerOperationInterce
private MessageHandler mySubscriptionCheckingSubscriber;
private ConcurrentHashMap<String, IBaseResource> myIdToSubscription = new ConcurrentHashMap<>();
private Logger ourLog = LoggerFactory.getLogger(BaseSubscriptionInterceptor.class);
private SubscriptionDeliveringRestHookSubscriber mySubscriptionDeliverySubscriber;
private BlockingQueue<Runnable> myExecutorQueue;
public ConcurrentHashMap<String, IBaseResource> getIdToSubscription() {
return myIdToSubscription;
}
public abstract Subscription.SubscriptionChannelType getChannelType();
public SubscribableChannel getProcessingChannel() {
@ -90,7 +95,7 @@ public abstract class BaseSubscriptionInterceptor extends ServerOperationInterce
}
}
public BlockingQueue<Runnable> getExecutorQueue() {
public BlockingQueue<Runnable> getExecutorQueueForUnitTests() {
return myExecutorQueue;
}
@ -122,31 +127,33 @@ public abstract class BaseSubscriptionInterceptor extends ServerOperationInterce
if (mySubscriptionActivatingSubscriber == null) {
mySubscriptionActivatingSubscriber = new SubscriptionActivatingSubscriber(getSubscriptionDao(), myIdToSubscription, getChannelType(), myProcessingChannel);
}
myProcessingChannel.subscribe(mySubscriptionActivatingSubscriber);
getProcessingChannel().subscribe(mySubscriptionActivatingSubscriber);
}
if (mySubscriptionCheckingSubscriber == null) {
mySubscriptionCheckingSubscriber = new SubscriptionCheckingSubscriber(getSubscriptionDao(), myIdToSubscription, getChannelType(), myProcessingChannel);
}
myProcessingChannel.subscribe(mySubscriptionCheckingSubscriber);
getProcessingChannel().subscribe(mySubscriptionCheckingSubscriber);
if (mySubscriptionDeliverySubscriber == null) {
mySubscriptionDeliverySubscriber = new SubscriptionDeliveringRestHookSubscriber(getSubscriptionDao(), myIdToSubscription, getChannelType(), myProcessingChannel);
}
myProcessingChannel.subscribe(mySubscriptionDeliverySubscriber);
registerDeliverySubscriber();
}
protected abstract void registerDeliverySubscriber();
@SuppressWarnings("unused")
@PreDestroy
public void preDestroy() {
if (myAutoActivateSubscriptions) {
myProcessingChannel.unsubscribe(mySubscriptionActivatingSubscriber);
getProcessingChannel().unsubscribe(mySubscriptionActivatingSubscriber);
}
myProcessingChannel.unsubscribe(mySubscriptionCheckingSubscriber);
myProcessingChannel.unsubscribe(mySubscriptionDeliverySubscriber);
getProcessingChannel().unsubscribe(mySubscriptionCheckingSubscriber);
unregisterDeliverySubscriber();
}
protected abstract void unregisterDeliverySubscriber();
@Override
public void resourceCreated(RequestDetails theRequest, IBaseResource theResource) {
ResourceModifiedMessage msg = new ResourceModifiedMessage();
@ -173,7 +180,15 @@ public abstract class BaseSubscriptionInterceptor extends ServerOperationInterce
submitResourceModified(msg);
}
private void submitResourceModified(ResourceModifiedMessage theMsg) {
myProcessingChannel.send(new GenericMessage<>(theMsg));
private void submitResourceModified(final ResourceModifiedMessage theMsg) {
/*
* We only actually submit this item work working after the
*/
TransactionSynchronizationManager.registerSynchronization(new TransactionSynchronizationAdapter() {
@Override
public void afterCommit() {
getProcessingChannel().send(new GenericMessage<>(theMsg));
}
});
}
}

19
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/BaseSubscriptionRestHookInterceptor.java Normal file
View File

@ -0,0 +1,19 @@
package ca.uhn.fhir.jpa.subscription;
public abstract class BaseSubscriptionRestHookInterceptor extends BaseSubscriptionInterceptor {
private SubscriptionDeliveringRestHookSubscriber mySubscriptionDeliverySubscriber;
@Override
protected void registerDeliverySubscriber() {
if (mySubscriptionDeliverySubscriber == null) {
mySubscriptionDeliverySubscriber = new SubscriptionDeliveringRestHookSubscriber(getSubscriptionDao(), getIdToSubscription(), getChannelType(), getProcessingChannel());
}
getProcessingChannel().subscribe(mySubscriptionDeliverySubscriber);
}
@Override
protected void unregisterDeliverySubscriber() {
getProcessingChannel().unsubscribe(mySubscriptionDeliverySubscriber);
}
}

37
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/BaseSubscriptionWebsocketInterceptor.java Normal file
View File

@ -0,0 +1,37 @@
package ca.uhn.fhir.jpa.subscription;
import ca.uhn.fhir.jpa.dao.data.IResourceTableDao;
import ca.uhn.fhir.jpa.dao.data.ISubscriptionFlaggedResourceDataDao;
import ca.uhn.fhir.jpa.dao.data.ISubscriptionTableDao;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.transaction.PlatformTransactionManager;
public abstract class BaseSubscriptionWebsocketInterceptor extends BaseSubscriptionInterceptor {
private SubscriptionDeliveringWebsocketSubscriber mySubscriptionDeliverySubscriber;
@Autowired
private ISubscriptionFlaggedResourceDataDao mySubscriptionFlaggedResourceDataDao;
@Autowired
private ISubscriptionTableDao mySubscriptionTableDao;
@Autowired
private PlatformTransactionManager myTxManager;
@Autowired
private IResourceTableDao myResourceTableDao;
@Override
protected void registerDeliverySubscriber() {
if (mySubscriptionDeliverySubscriber == null) {
mySubscriptionDeliverySubscriber = new SubscriptionDeliveringWebsocketSubscriber(getSubscriptionDao(), getIdToSubscription(), getChannelType(), getProcessingChannel(), myTxManager, mySubscriptionFlaggedResourceDataDao, mySubscriptionTableDao, myResourceTableDao);
}
getProcessingChannel().subscribe(mySubscriptionDeliverySubscriber);
}
@Override
protected void unregisterDeliverySubscriber() {
getProcessingChannel().unsubscribe(mySubscriptionDeliverySubscriber);
}
}

15
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionActivatingSubscriber.java
View File

@ -9,7 +9,6 @@ import org.hl7.fhir.r4.model.Subscription;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.messaging.Message;
import org.springframework.messaging.MessageHandler;
import org.springframework.messaging.MessagingException;
import org.springframework.messaging.SubscribableChannel;
@ -41,12 +40,16 @@ public class SubscriptionActivatingSubscriber extends BaseSubscriptionSubscriber
IPrimitiveType<?> status = ctx.newTerser().getSingleValueOrNull(subscription, SUBSCRIPTION_STATUS, IPrimitiveType.class);
String statusString = status.getValueAsString();
String oldStatus = Subscription.SubscriptionStatus.REQUESTED.toCode();
if (oldStatus.equals(statusString)) {
String newStatus = Subscription.SubscriptionStatus.ACTIVE.toCode();
status.setValueAsString(newStatus);
ourLog.info("Activating subscription {} from status {} to {}", subscription.getIdElement().toUnqualifiedVersionless().getValue(), oldStatus, newStatus);
String requestedStatus = Subscription.SubscriptionStatus.REQUESTED.toCode();
String activeStatus = Subscription.SubscriptionStatus.ACTIVE.toCode();
if (requestedStatus.equals(statusString)) {
status.setValueAsString(activeStatus);
ourLog.info("Activating subscription {} from status {} to {}", subscription.getIdElement().toUnqualified().getValue(), requestedStatus, activeStatus);
getSubscriptionDao().update(subscription);
getIdToSubscription().put(subscription.getIdElement().getIdPart(), subscription);
} else if (activeStatus.equals(statusString)) {
ourLog.info("Newly created active subscription {}", subscription.getIdElement().toUnqualified().getValue());
getIdToSubscription().put(subscription.getIdElement().getIdPart(), subscription);
}
}

11
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionCheckingSubscriber.java
View File

@ -77,12 +77,6 @@ public class SubscriptionCheckingSubscriber extends BaseSubscriptionSubscriber {
criteria += "&_id=" + resourceType + "/" + resourceId;
criteria = massageCriteria(criteria);
try {
Thread.sleep(500);
} catch (InterruptedException theE) {
theE.printStackTrace();
}
IBundleProvider results = performSearch(criteria);
if (results.size() == 0) {
continue;
@ -90,11 +84,10 @@ public class SubscriptionCheckingSubscriber extends BaseSubscriptionSubscriber {
// should just be one resource as it was filtered by the id
for (IBaseResource nextBase : results.getResources(0, results.size())) {
IBaseResource next = (IBaseResource) nextBase;
ourLog.info("Found match: queueing rest-hook notification for resource: {}", next.getIdElement());
ourLog.info("Found match: queueing rest-hook notification for resource: {}", nextBase.getIdElement());
ResourceDeliveryMessage deliveryMsg = new ResourceDeliveryMessage();
deliveryMsg.setPayoad(next);
deliveryMsg.setPayoad(nextBase);
deliveryMsg.setSubscription(nextSubscription);
deliveryMsg.setOperationType(msg.getOperationType());
deliveryMsg.setPayloadId(msg.getId());

142
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionDeliveringWebsocketSubscriber.java Normal file
View File

@ -0,0 +1,142 @@
package ca.uhn.fhir.jpa.subscription;
import ca.uhn.fhir.jpa.dao.IDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.data.IResourceTableDao;
import ca.uhn.fhir.jpa.dao.data.ISubscriptionFlaggedResourceDataDao;
import ca.uhn.fhir.jpa.dao.data.ISubscriptionTableDao;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.entity.SubscriptionFlaggedResource;
import ca.uhn.fhir.jpa.entity.SubscriptionTable;
import ca.uhn.fhir.model.api.IResource;
import ca.uhn.fhir.rest.api.EncodingEnum;
import ca.uhn.fhir.rest.api.RestOperationTypeEnum;
import ca.uhn.fhir.rest.client.api.IGenericClient;
import ca.uhn.fhir.rest.client.api.ServerValidationModeEnum;
import ca.uhn.fhir.rest.gclient.IClientExecutable;
import org.apache.commons.lang3.ObjectUtils;
import org.hl7.fhir.instance.model.api.IAnyResource;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IPrimitiveType;
import org.hl7.fhir.r4.model.Subscription;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.messaging.Message;
import org.springframework.messaging.MessagingException;
import org.springframework.messaging.SubscribableChannel;
import org.springframework.transaction.PlatformTransactionManager;
import org.springframework.transaction.TransactionStatus;
import org.springframework.transaction.support.TransactionCallbackWithoutResult;
import org.springframework.transaction.support.TransactionTemplate;
import java.util.concurrent.ConcurrentHashMap;
public class SubscriptionDeliveringWebsocketSubscriber extends BaseSubscriptionSubscriber {
private final PlatformTransactionManager myTxManager;
private final ISubscriptionFlaggedResourceDataDao mySubscriptionFlaggedResourceDao;
private final ISubscriptionTableDao mySubscriptionTableDao;
private final IResourceTableDao myResourceTableDao;
private Logger ourLog = LoggerFactory.getLogger(SubscriptionDeliveringWebsocketSubscriber.class);
public SubscriptionDeliveringWebsocketSubscriber(IFhirResourceDao theSubscriptionDao, ConcurrentHashMap<String, IBaseResource> theIdToSubscription, Subscription.SubscriptionChannelType theChannelType, SubscribableChannel theProcessingChannel, PlatformTransactionManager theTxManager, ISubscriptionFlaggedResourceDataDao theSubscriptionFlaggedResourceDataDao, ISubscriptionTableDao theSubscriptionTableDao, IResourceTableDao theResourceTableDao) {
super(theSubscriptionDao, theIdToSubscription, theChannelType, theProcessingChannel);
myTxManager = theTxManager;
mySubscriptionFlaggedResourceDao = theSubscriptionFlaggedResourceDataDao;
mySubscriptionTableDao = theSubscriptionTableDao;
myResourceTableDao = theResourceTableDao;
}
@Override
public void handleMessage(final Message<?> theMessage) throws MessagingException {
if (!(theMessage.getPayload() instanceof ResourceDeliveryMessage)) {
return;
}
final ResourceDeliveryMessage msg = (ResourceDeliveryMessage) theMessage.getPayload();
if (!subscriptionTypeApplies(getContext(), msg.getSubscription())) {
return;
}
TransactionTemplate txTemplate = new TransactionTemplate(myTxManager);
txTemplate.setPropagationBehavior(TransactionTemplate.PROPAGATION_REQUIRED);
txTemplate.execute(new TransactionCallbackWithoutResult() {
@Override
protected void doInTransactionWithoutResult(TransactionStatus status) {
IBaseResource payload = msg.getPayoad();
Long payloadPid = extractResourcePid(payload);
ResourceTable payloadTable = myResourceTableDao.findOne(payloadPid);
IBaseResource subscription = msg.getSubscription();
Long subscriptionPid = extractResourcePid(subscription);
SubscriptionTable subscriptionTable = mySubscriptionTableDao.findOneByResourcePid(subscriptionPid);
ourLog.info("Adding new resource {} for subscription: {}", payload.getIdElement().toUnqualified().getValue(), subscription.getIdElement().toUnqualifiedVersionless().getValue());
SubscriptionFlaggedResource candidate = new SubscriptionFlaggedResource();
candidate.setResource(payloadTable);
candidate.setSubscription(subscriptionTable);
candidate.setVersion(payload.getIdElement().getVersionIdPartAsLong());
mySubscriptionFlaggedResourceDao.save(candidate);
}
});
RestOperationTypeEnum operationType = msg.getOperationType();
IBaseResource subscription = msg.getSubscription();
// Grab the endpoint from the subscription
IPrimitiveType<?> endpoint = getContext().newTerser().getSingleValueOrNull(subscription, BaseSubscriptionInterceptor.SUBSCRIPTION_ENDPOINT, IPrimitiveType.class);
String endpointUrl = endpoint.getValueAsString();
// Grab the payload type (encoding mimetype ) from the subscription
IPrimitiveType<?> payload = getContext().newTerser().getSingleValueOrNull(subscription, BaseSubscriptionInterceptor.SUBSCRIPTION_PAYLOAD, IPrimitiveType.class);
String payloadString = payload.getValueAsString();
if (payloadString.contains(";")) {
payloadString = payloadString.substring(0, payloadString.indexOf(';'));
}
payloadString = payloadString.trim();
EncodingEnum payloadType = EncodingEnum.forContentType(payloadString);
payloadType = ObjectUtils.defaultIfNull(payloadType, EncodingEnum.XML);
getContext().getRestfulClientFactory().setServerValidationMode(ServerValidationModeEnum.NEVER);
IGenericClient client = getContext().newRestfulGenericClient(endpointUrl);
IBaseResource payloadResource = msg.getPayoad();
IClientExecutable<?, ?> operation;
switch (operationType) {
case CREATE:
operation = client.create().resource(payloadResource);
break;
case UPDATE:
operation = client.update().resource(payloadResource);
break;
case DELETE:
operation = client.delete().resourceById(msg.getPayloadId());
break;
default:
ourLog.warn("Ignoring delivery message of type: {}", msg.getOperationType());
return;
}
operation.encoded(payloadType);
ourLog.info("Delivering {} rest-hook payload {} for {}", operationType, payloadResource.getIdElement().toUnqualified().getValue(), subscription.getIdElement().toUnqualifiedVersionless().getValue());
operation.execute();
}
private Long extractResourcePid(IBaseResource thePayoad) {
Long pid;
if (thePayoad instanceof IResource) {
pid = IDao.RESOURCE_PID.get((IResource) thePayoad);
} else {
pid = IDao.RESOURCE_PID.get((IAnyResource) thePayoad);
}
return pid;
}
}

6
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/RestHookSubscriptionDstu2Interceptor.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu2/RestHookSubscriptionDstu2Interceptor.java
View File

@ -1,4 +1,4 @@
package ca.uhn.fhir.jpa.interceptor;
package ca.uhn.fhir.jpa.subscription.dstu2;
/*-
* #%L
@ -21,12 +21,12 @@ package ca.uhn.fhir.jpa.interceptor;
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionInterceptor;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionRestHookInterceptor;
import ca.uhn.fhir.model.dstu2.resource.Subscription;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
public class RestHookSubscriptionDstu2Interceptor extends BaseSubscriptionInterceptor {
public class RestHookSubscriptionDstu2Interceptor extends BaseSubscriptionRestHookInterceptor {
@Autowired
@Qualifier("mySubscriptionDaoDstu2")
private IFhirResourceDao<Subscription> mySubscriptionDao;

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionWebsocketHandlerDstu2.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu2/SubscriptionWebsocketHandlerDstu2.java
View File

@ -1,4 +1,4 @@
package ca.uhn.fhir.jpa.subscription;
package ca.uhn.fhir.jpa.subscription.dstu2;
/*
* #%L
@ -27,6 +27,7 @@ import java.util.concurrent.ScheduledFuture;
import javax.annotation.PostConstruct;
import javax.annotation.PreDestroy;
import ca.uhn.fhir.jpa.subscription.ISubscriptionWebsocketHandler;
import org.apache.http.NameValuePair;
import org.apache.http.client.utils.URLEncodedUtils;
import org.hl7.fhir.instance.model.api.IBaseResource;

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionWebsocketReturnResourceHandlerDstu2.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu2/SubscriptionWebsocketReturnResourceHandlerDstu2.java
View File

@ -1,5 +1,5 @@
package ca.uhn.fhir.jpa.subscription;
package ca.uhn.fhir.jpa.subscription.dstu2;
import java.io.IOException;
import java.util.List;
@ -8,6 +8,7 @@ import java.util.concurrent.ScheduledFuture;
import javax.annotation.PostConstruct;
import javax.annotation.PreDestroy;
import ca.uhn.fhir.jpa.subscription.ISubscriptionWebsocketHandler;
import org.apache.http.NameValuePair;
import org.apache.http.client.utils.URLEncodedUtils;
import org.hl7.fhir.instance.model.api.IBaseResource;

45
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu2/WebSocketSubscriptionDstu2Interceptor.java Normal file
View File

@ -0,0 +1,45 @@
package ca.uhn.fhir.jpa.subscription.dstu2;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionWebsocketInterceptor;
import ca.uhn.fhir.model.dstu2.resource.Subscription;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
public class WebSocketSubscriptionDstu2Interceptor extends BaseSubscriptionWebsocketInterceptor {
@Autowired
@Qualifier("mySubscriptionDaoDstu2")
private IFhirResourceDao<Subscription> mySubscriptionDao;
@Override
public org.hl7.fhir.r4.model.Subscription.SubscriptionChannelType getChannelType() {
return org.hl7.fhir.r4.model.Subscription.SubscriptionChannelType.WEBSOCKET;
}
@Override
protected IFhirResourceDao<?> getSubscriptionDao() {
return mySubscriptionDao;
}
}

16
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/RestHookSubscriptionDstu3Interceptor.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu3/RestHookSubscriptionDstu3Interceptor.java
View File

@ -1,5 +1,4 @@
package ca.uhn.fhir.jpa.interceptor;
package ca.uhn.fhir.jpa.subscription.dstu3;
/*-
* #%L
@ -22,22 +21,21 @@ package ca.uhn.fhir.jpa.interceptor;
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionInterceptor;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionRestHookInterceptor;
import org.hl7.fhir.dstu3.model.Subscription;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
public class RestHookSubscriptionDstu3Interceptor extends BaseSubscriptionInterceptor
{
public class RestHookSubscriptionDstu3Interceptor extends BaseSubscriptionRestHookInterceptor {
@Autowired
@Qualifier("mySubscriptionDaoDstu3")
private IFhirResourceDao<Subscription> mySubscriptionDao;
@Override
protected IFhirResourceDao<?> getSubscriptionDao() {
return mySubscriptionDao;
}
@Autowired
@Qualifier("mySubscriptionDaoDstu3")
private IFhirResourceDao<Subscription> mySubscriptionDao;
public void setSubscriptionDao(IFhirResourceDao<Subscription> theSubscriptionDao) {
mySubscriptionDao = theSubscriptionDao;
}

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionWebsocketHandlerDstu3.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu3/SubscriptionWebsocketHandlerDstu3.java
View File

@ -1,4 +1,4 @@
package ca.uhn.fhir.jpa.subscription;
package ca.uhn.fhir.jpa.subscription.dstu3;
/*
* #%L
@ -27,6 +27,7 @@ import java.util.concurrent.ScheduledFuture;
import javax.annotation.PostConstruct;
import javax.annotation.PreDestroy;
import ca.uhn.fhir.jpa.subscription.ISubscriptionWebsocketHandler;
import org.apache.http.NameValuePair;
import org.apache.http.client.utils.URLEncodedUtils;
import org.hl7.fhir.dstu3.model.IdType;

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/SubscriptionWebsocketReturnResourceHandlerDstu3.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu3/SubscriptionWebsocketReturnResourceHandlerDstu3.java
View File

@ -1,5 +1,5 @@
package ca.uhn.fhir.jpa.subscription;
package ca.uhn.fhir.jpa.subscription.dstu3;
import java.io.IOException;
import java.util.List;
@ -8,6 +8,7 @@ import java.util.concurrent.ScheduledFuture;
import javax.annotation.PostConstruct;
import javax.annotation.PreDestroy;
import ca.uhn.fhir.jpa.subscription.ISubscriptionWebsocketHandler;
import org.apache.http.NameValuePair;
import org.apache.http.client.utils.URLEncodedUtils;
import org.hl7.fhir.dstu3.model.IdType;

57
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/dstu3/WebSocketSubscriptionDstu3Interceptor.java Normal file
View File

@ -0,0 +1,57 @@
package ca.uhn.fhir.jpa.subscription.dstu3;
import javax.annotation.PostConstruct;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionWebsocketInterceptor;
import org.hl7.fhir.dstu3.model.Subscription;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSubscription;
import ca.uhn.fhir.rest.api.RequestTypeEnum;
import ca.uhn.fhir.rest.api.RestOperationTypeEnum;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.AuthenticationException;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
public class WebSocketSubscriptionDstu3Interceptor extends BaseSubscriptionWebsocketInterceptor {
@Autowired
@Qualifier("mySubscriptionDaoDstu3")
private IFhirResourceDao<org.hl7.fhir.dstu3.model.Subscription> mySubscriptionDao;
@Override
public org.hl7.fhir.r4.model.Subscription.SubscriptionChannelType getChannelType() {
return org.hl7.fhir.r4.model.Subscription.SubscriptionChannelType.WEBSOCKET;
}
@Override
protected IFhirResourceDao<?> getSubscriptionDao() {
return mySubscriptionDao;
}
}

6
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/interceptor/r4/RestHookSubscriptionR4Interceptor.java → hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/r4/RestHookSubscriptionR4Interceptor.java
View File

@ -1,4 +1,4 @@
package ca.uhn.fhir.jpa.interceptor.r4;
package ca.uhn.fhir.jpa.subscription.r4;
/*-
* #%L
@ -21,11 +21,11 @@ package ca.uhn.fhir.jpa.interceptor.r4;
*/
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionInterceptor;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionRestHookInterceptor;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
public class RestHookSubscriptionR4Interceptor extends BaseSubscriptionInterceptor {
public class RestHookSubscriptionR4Interceptor extends BaseSubscriptionRestHookInterceptor {
@Autowired
@Qualifier("mySubscriptionDaoR4")
private IFhirResourceDao<org.hl7.fhir.r4.model.Subscription> mySubscriptionDao;

44
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/r4/WebSocketSubscriptionR4Interceptor.java Normal file
View File

@ -0,0 +1,44 @@
package ca.uhn.fhir.jpa.subscription.r4;
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.subscription.BaseSubscriptionWebsocketInterceptor;
import org.hl7.fhir.r4.model.Subscription;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
/*-
* #%L
* HAPI FHIR JPA Server
* %%
* Copyright (C) 2014 - 2017 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
public class WebSocketSubscriptionR4Interceptor extends BaseSubscriptionWebsocketInterceptor {
@Autowired
@Qualifier("mySubscriptionDaoR4")
private IFhirResourceDao<org.hl7.fhir.r4.model.Subscription> mySubscriptionDao;
@Override
public Subscription.SubscriptionChannelType getChannelType() {
return Subscription.SubscriptionChannelType.WEBSOCKET;
}
@Override
protected IFhirResourceDao<?> getSubscriptionDao() {
return mySubscriptionDao;
}
}

107
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu2/FhirResourceDaoDstu2InterceptorTest.java
View File

@ -1,19 +1,16 @@
package ca.uhn.fhir.jpa.dao.dstu2;
import static org.hamcrest.Matchers.containsString;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNotEquals;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertThat;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.doAnswer;
import static org.mockito.Mockito.mock;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.verifyNoMoreInteractions;
import org.hl7.fhir.dstu3.model.Bundle.BundleType;
import org.hl7.fhir.dstu3.model.Bundle.HTTPVerb;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.DeleteMethodOutcome;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.dstu2.valueset.BundleTypeEnum;
import ca.uhn.fhir.model.dstu2.valueset.HTTPVerbEnum;
import ca.uhn.fhir.model.primitive.IdDt;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
import ca.uhn.fhir.util.TestUtil;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.After;
@ -24,26 +21,15 @@ import org.mockito.ArgumentCaptor;
import org.mockito.invocation.InvocationOnMock;
import org.mockito.stubbing.Answer;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.DaoMethodOutcome;
import ca.uhn.fhir.jpa.dao.DeleteMethodOutcome;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.interceptor.IJpaServerInterceptor;
import ca.uhn.fhir.jpa.interceptor.JpaServerInterceptorAdapter;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.dstu2.valueset.BundleTypeEnum;
import ca.uhn.fhir.model.dstu2.valueset.HTTPVerbEnum;
import ca.uhn.fhir.model.primitive.IdDt;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.rest.server.servlet.ServletRequestDetails;
import ca.uhn.fhir.util.TestUtil;
import static org.hamcrest.Matchers.containsString;
import static org.junit.Assert.*;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.*;
public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirResourceDaoDstu2InterceptorTest.class);
private IJpaServerInterceptor myJpaInterceptor;
private JpaServerInterceptorAdapter myJpaInterceptorAdapter = new JpaServerInterceptorAdapter();
private IServerOperationInterceptor myJpaInterceptor;
private ServerOperationInterceptorAdapter myJpaInterceptorAdapter = new ServerOperationInterceptorAdapter();
@After
public void after() {
@ -54,7 +40,7 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
@Before
public void before() {
myJpaInterceptor = mock(IJpaServerInterceptor.class);
myJpaInterceptor = mock(IServerOperationInterceptor.class);
myDaoConfig.getInterceptors().add(myJpaInterceptor);
myDaoConfig.getInterceptors().add(myJpaInterceptorAdapter);
}
@ -66,17 +52,17 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
p.addName().addFamily("PATIENT");
Long id = myPatientDao.create(p, mySrd).getId().getIdPartAsLong();
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPart());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(0)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
/*
@ -87,8 +73,8 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
Long id2 = myPatientDao.create(p, "Patient?family=PATIENT", mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(0)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
@ -102,14 +88,14 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
myPatientDao.delete(new IdDt("Patient", id), mySrd);
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceDeleted(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPart());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
}
@ -132,14 +118,14 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
Long id2 = myPatientDao.update(p, mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPart());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
/*
* Now do a conditional update
@ -151,11 +137,11 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
id2 = myPatientDao.update(p, "Patient?family=PATIENT1", mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(2)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
assertEquals(id, tableCapt.getAllValues().get(2).getId());
assertEquals(id, tableCapt.getAllValues().get(2).getIdElement().getIdPartAsLong());
/*
* Now do a conditional update where none will match (so this is actually a create)
@ -166,11 +152,11 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
id2 = myPatientDao.update(p, "Patient?family=ZZZ", mySrd).getId().getIdPartAsLong();
assertNotEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(2)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(2)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
assertEquals(id2, tableCapt.getAllValues().get(3).getId());
assertEquals(id2, tableCapt.getAllValues().get(3).getIdElement().getIdPartAsLong());
}
@ -347,6 +333,7 @@ public class FhirResourceDaoDstu2InterceptorTest extends BaseJpaDstu2Test {
.setUrl("Patient?name=PATIENT")
.setMethod(HTTPVerbEnum.DELETE);
Bundle resp = mySystemDao.transaction(mySrd, xactBundle);
assertNotNull(resp);
verify(myRequestOperationCallback, times(2)).resourceDeleted(any(IBaseResource.class));
verify(myRequestOperationCallback, times(2)).resourceCreated(any(IBaseResource.class));

105
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoDstu3InterceptorTest.java
View File

@ -1,35 +1,36 @@
package ca.uhn.fhir.jpa.dao.dstu3;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.DeleteMethodOutcome;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
import ca.uhn.fhir.util.TestUtil;
import org.hl7.fhir.dstu3.model.Bundle;
import org.hl7.fhir.dstu3.model.Bundle.BundleType;
import org.hl7.fhir.dstu3.model.Bundle.HTTPVerb;
import org.hl7.fhir.dstu3.model.IdType;
import org.hl7.fhir.dstu3.model.Patient;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.After;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentCaptor;
import org.mockito.Mockito;
import org.mockito.invocation.InvocationOnMock;
import org.mockito.stubbing.Answer;
import static org.hamcrest.Matchers.containsString;
import static org.junit.Assert.*;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.*;
import org.hl7.fhir.dstu3.model.*;
import org.hl7.fhir.dstu3.model.Bundle.BundleType;
import org.hl7.fhir.dstu3.model.Bundle.HTTPVerb;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.*;
import org.mockito.ArgumentCaptor;
import org.mockito.Mockito;
import org.mockito.invocation.InvocationOnMock;
import org.mockito.stubbing.Answer;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.DeleteMethodOutcome;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.interceptor.IJpaServerInterceptor;
import ca.uhn.fhir.jpa.interceptor.JpaServerInterceptorAdapter;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.util.TestUtil;
public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirResourceDaoDstu3InterceptorTest.class);
private IJpaServerInterceptor myJpaInterceptor;
private JpaServerInterceptorAdapter myJpaInterceptorAdapter = new JpaServerInterceptorAdapter();
private IServerOperationInterceptor myJpaInterceptor;
private ServerOperationInterceptorAdapter myJpaInterceptorAdapter = new ServerOperationInterceptorAdapter();
private IServerOperationInterceptor myServerOperationInterceptor;
@After
@ -41,7 +42,7 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
@Before
public void before() {
myJpaInterceptor = mock(IJpaServerInterceptor.class);
myJpaInterceptor = mock(IServerOperationInterceptor.class);
myServerOperationInterceptor = mock(IServerOperationInterceptor.class, new Answer<Object>() {
@Override
@ -64,17 +65,17 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
p.addName().setFamily("PATIENT");
Long id = myPatientDao.create(p, mySrd).getId().getIdPartAsLong();
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPartAsLong());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(0)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
/*
@ -85,8 +86,8 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
Long id2 = myPatientDao.create(p, "Patient?family=PATIENT", mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(0)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
@ -107,14 +108,14 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
myPatientDao.delete(new IdType("Patient", id), mySrd);
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceDeleted(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPartAsLong());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
}
@ -130,14 +131,14 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
Long id2 = myPatientDao.update(p, mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPartAsLong());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
/*
* Now do a conditional update
@ -149,11 +150,11 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
id2 = myPatientDao.update(p, "Patient?family=PATIENT1", mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(2)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
assertEquals(id, tableCapt.getAllValues().get(2).getId());
assertEquals(id, tableCapt.getAllValues().get(2).getIdElement().getIdPartAsLong());
/*
* Now do a conditional update where none will match (so this is actually a create)
@ -164,11 +165,11 @@ public class FhirResourceDaoDstu3InterceptorTest extends BaseJpaDstu3Test {
id2 = myPatientDao.update(p, "Patient?family=ZZZ", mySrd).getId().getIdPartAsLong();
assertNotEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(2)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(2)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
assertEquals(id2, tableCapt.getAllValues().get(3).getId());
assertEquals(id2, tableCapt.getAllValues().get(3).getIdElement().getIdPartAsLong());
}

105
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/r4/FhirResourceDaoR4InterceptorTest.java
View File

@ -1,35 +1,36 @@
package ca.uhn.fhir.jpa.dao.r4;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.DeleteMethodOutcome;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.rest.server.interceptor.ServerOperationInterceptorAdapter;
import ca.uhn.fhir.util.TestUtil;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.r4.model.Bundle;
import org.hl7.fhir.r4.model.Bundle.BundleType;
import org.hl7.fhir.r4.model.Bundle.HTTPVerb;
import org.hl7.fhir.r4.model.IdType;
import org.hl7.fhir.r4.model.Patient;
import org.junit.After;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.Test;
import org.mockito.ArgumentCaptor;
import org.mockito.Mockito;
import org.mockito.invocation.InvocationOnMock;
import org.mockito.stubbing.Answer;
import static org.hamcrest.Matchers.containsString;
import static org.junit.Assert.*;
import static org.mockito.Matchers.any;
import static org.mockito.Mockito.*;
import org.hl7.fhir.r4.model.*;
import org.hl7.fhir.r4.model.Bundle.BundleType;
import org.hl7.fhir.r4.model.Bundle.HTTPVerb;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.*;
import org.mockito.ArgumentCaptor;
import org.mockito.Mockito;
import org.mockito.invocation.InvocationOnMock;
import org.mockito.stubbing.Answer;
import ca.uhn.fhir.jpa.dao.DaoConfig;
import ca.uhn.fhir.jpa.dao.DeleteMethodOutcome;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.jpa.interceptor.IJpaServerInterceptor;
import ca.uhn.fhir.jpa.interceptor.JpaServerInterceptorAdapter;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
import ca.uhn.fhir.rest.server.interceptor.IServerOperationInterceptor;
import ca.uhn.fhir.util.TestUtil;
public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirResourceDaoR4InterceptorTest.class);
private IJpaServerInterceptor myJpaInterceptor;
private JpaServerInterceptorAdapter myJpaInterceptorAdapter = new JpaServerInterceptorAdapter();
private IServerOperationInterceptor myJpaInterceptor;
private ServerOperationInterceptorAdapter myJpaInterceptorAdapter = new ServerOperationInterceptorAdapter();
private IServerOperationInterceptor myServerOperationInterceptor;
@After
@ -41,7 +42,7 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
@Before
public void before() {
myJpaInterceptor = mock(IJpaServerInterceptor.class);
myJpaInterceptor = mock(IServerOperationInterceptor.class);
myServerOperationInterceptor = mock(IServerOperationInterceptor.class, new Answer<Object>() {
@Override
@ -64,17 +65,17 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
p.addName().setFamily("PATIENT");
Long id = myPatientDao.create(p, mySrd).getId().getIdPartAsLong();
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPart());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(0)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
/*
@ -85,8 +86,8 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
Long id2 = myPatientDao.create(p, "Patient?family=PATIENT", mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(0)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
@ -107,14 +108,14 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
myPatientDao.delete(new IdType("Patient", id), mySrd);
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceDeleted(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPart());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
}
@ -130,14 +131,14 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
Long id2 = myPatientDao.update(p, mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
ArgumentCaptor<ActionRequestDetails> detailsCapt;
ArgumentCaptor<ResourceTable> tableCapt;
ArgumentCaptor<RequestDetails> detailsCapt;
ArgumentCaptor<IBaseResource> tableCapt;
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
assertNotNull(tableCapt.getValue().getId());
assertEquals(id, tableCapt.getValue().getId());
assertNotNull(tableCapt.getValue().getIdElement().getIdPart());
assertEquals(id, tableCapt.getValue().getIdElement().getIdPartAsLong());
/*
* Now do a conditional update
@ -149,11 +150,11 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
id2 = myPatientDao.update(p, "Patient?family=PATIENT1", mySrd).getId().getIdPartAsLong();
assertEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(1)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(2)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
assertEquals(id, tableCapt.getAllValues().get(2).getId());
assertEquals(id, tableCapt.getAllValues().get(2).getIdElement().getIdPartAsLong());
/*
* Now do a conditional update where none will match (so this is actually a create)
@ -164,11 +165,11 @@ public class FhirResourceDaoR4InterceptorTest extends BaseJpaR4Test {
id2 = myPatientDao.update(p, "Patient?family=ZZZ", mySrd).getId().getIdPartAsLong();
assertNotEquals(id, id2);
detailsCapt = ArgumentCaptor.forClass(ActionRequestDetails.class);
tableCapt = ArgumentCaptor.forClass(ResourceTable.class);
detailsCapt = ArgumentCaptor.forClass(RequestDetails.class);
tableCapt = ArgumentCaptor.forClass(IBaseResource.class);
verify(myJpaInterceptor, times(2)).resourceUpdated(detailsCapt.capture(), tableCapt.capture());
verify(myJpaInterceptor, times(2)).resourceCreated(detailsCapt.capture(), tableCapt.capture());
assertEquals(id2, tableCapt.getAllValues().get(3).getId());
assertEquals(id2, tableCapt.getAllValues().get(3).getIdElement().getIdPartAsLong());
}

2
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/BaseResourceProviderDstu2Test.java
View File

@ -22,7 +22,7 @@ import org.springframework.web.servlet.DispatcherServlet;
import ca.uhn.fhir.jpa.config.WebsocketDstu2Config;
import ca.uhn.fhir.jpa.config.WebsocketDstu2DispatcherConfig;
import ca.uhn.fhir.jpa.dao.dstu2.BaseJpaDstu2Test;
import ca.uhn.fhir.jpa.interceptor.RestHookSubscriptionDstu2Interceptor;
import ca.uhn.fhir.jpa.subscription.dstu2.RestHookSubscriptionDstu2Interceptor;
import ca.uhn.fhir.jpa.search.DatabaseBackedPagingProvider;
import ca.uhn.fhir.jpa.testutil.RandomServerPortProvider;
import ca.uhn.fhir.model.dstu2.resource.Bundle;

2
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/dstu3/BaseResourceProviderDstu3Test.java
View File

@ -26,7 +26,7 @@ import ca.uhn.fhir.jpa.config.dstu3.WebsocketDstu3DispatcherConfig;
import ca.uhn.fhir.jpa.dao.data.ISearchDao;
import ca.uhn.fhir.jpa.dao.dstu3.BaseJpaDstu3Test;
import ca.uhn.fhir.jpa.dao.dstu3.SearchParamRegistryDstu3;
import ca.uhn.fhir.jpa.interceptor.RestHookSubscriptionDstu3Interceptor;
import ca.uhn.fhir.jpa.subscription.dstu3.RestHookSubscriptionDstu3Interceptor;
import ca.uhn.fhir.jpa.search.DatabaseBackedPagingProvider;
import ca.uhn.fhir.jpa.search.ISearchCoordinatorSvc;
import ca.uhn.fhir.jpa.validation.JpaValidationSupportChainDstu3;

2
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/r4/BaseResourceProviderR4Test.java
View File

@ -26,7 +26,7 @@ import ca.uhn.fhir.jpa.config.r4.WebsocketR4DispatcherConfig;
import ca.uhn.fhir.jpa.dao.data.ISearchDao;
import ca.uhn.fhir.jpa.dao.r4.BaseJpaR4Test;
import ca.uhn.fhir.jpa.dao.r4.SearchParamRegistryR4;
import ca.uhn.fhir.jpa.interceptor.r4.RestHookSubscriptionR4Interceptor;
import ca.uhn.fhir.jpa.subscription.r4.RestHookSubscriptionR4Interceptor;
import ca.uhn.fhir.jpa.search.DatabaseBackedPagingProvider;
import ca.uhn.fhir.jpa.search.ISearchCoordinatorSvc;
import ca.uhn.fhir.jpa.validation.JpaValidationSupportChainR4;

7
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/RestHookTestDstu2Test.java
View File

@ -50,6 +50,7 @@ public class RestHookTestDstu2Test extends BaseResourceProviderDstu2Test {
@After
public void afterUnregisterRestHookListener() {
ourLog.info("** AFTER **");
for (IIdType next : mySubscriptionIds) {
ourClient.delete().resourceById(next).execute();
}
@ -279,11 +280,11 @@ public class RestHookTestDstu2Test extends BaseResourceProviderDstu2Test {
}
private void waitForQueueToDrain() throws InterruptedException {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueue().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueue().size() > 0) {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size() > 0) {
Thread.sleep(250);
}
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueue().size());
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
}
@BeforeClass

8
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/RestHookTestDstu3Test.java
View File

@ -21,8 +21,6 @@ import org.hl7.fhir.dstu3.model.*;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.*;
import org.springframework.messaging.support.ChannelInterceptor;
import org.springframework.messaging.support.ExecutorSubscribableChannel;
import javax.servlet.http.HttpServletRequest;
import java.util.ArrayList;
@ -153,11 +151,11 @@ public class RestHookTestDstu3Test extends BaseResourceProviderDstu3Test {
}
private void waitForQueueToDrain() throws InterruptedException {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueue().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueue().size() > 0) {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size() > 0) {
Thread.sleep(250);
}
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueue().size());
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
}
@Test

39
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test.java
View File

@ -53,6 +53,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
@After
public void afterUnregisterRestHookListener() {
ourLog.info("** AFTER **");
myDaoConfig.setAllowMultipleDelete(true);
ourLog.info("Deleting all subscriptions");
ourClient.delete().resourceConditionalByUrl("Subscription?status=active").execute();
@ -73,10 +74,20 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
ourUpdatedObservations.clear();
}
private Subscription createSubscription(String criteria, String payload, String endpoint) {
private void waitForQueueToDrain() throws InterruptedException {
Thread.sleep(1000);
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size() > 0) {
Thread.sleep(250);
}
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
}
private Subscription createSubscription(String criteria, String payload, String endpoint) throws InterruptedException {
Subscription subscription = new Subscription();
subscription.setReason("Monitor new neonatal function (note, age will be determined by the monitor)");
subscription.setStatus(SubscriptionStatusEnum.ACTIVE);
subscription.setStatus(SubscriptionStatusEnum.REQUESTED);
subscription.setCriteria(criteria);
Channel channel = new Channel();
@ -88,10 +99,11 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
MethodOutcome methodOutcome = ourClient.create().resource(subscription).execute();
subscription.setId(methodOutcome.getId().getIdPart());
waitForQueueToDrain();
return subscription;
}
private Observation sendObservation(String code, String system) {
private Observation sendObservation(String code, String system) throws InterruptedException {
Observation observation = new Observation();
CodeableConceptDt codeableConcept = new CodeableConceptDt();
observation.setCode(codeableConcept);
@ -106,6 +118,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
String observationId = methodOutcome.getId().getIdPart();
observation.setId(observationId);
waitForQueueToDrain();
return observation;
}
@ -123,7 +136,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
Observation observation1 = sendObservation(code, "SNOMED-CT");
// Should see 1 subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(1, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -137,7 +150,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
Observation observation2 = sendObservation(code, "SNOMED-CT");
// Should see two subscription notifications
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(3, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -146,7 +159,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
Observation observationTemp3 = sendObservation(code, "SNOMED-CT");
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -159,7 +172,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
ourClient.update().resource(observation3).withId(observation3.getIdElement()).execute();
// Should see no subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -173,7 +186,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
ourClient.update().resource(observation3a).withId(observation3a.getIdElement()).execute();
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(1, ourUpdatedObservations.size());
@ -196,7 +209,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
Observation observation1 = sendObservation(code, "SNOMED-CT");
// Should see 1 subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(1, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -210,7 +223,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
Observation observation2 = sendObservation(code, "SNOMED-CT");
// Should see two subscription notifications
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(3, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -219,7 +232,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
Observation observationTemp3 = sendObservation(code, "SNOMED-CT");
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -232,7 +245,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
ourClient.update().resource(observation3).withId(observation3.getIdElement()).execute();
// Should see no subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -246,7 +259,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu2Test extends B
ourClient.update().resource(observation3a).withId(observation3a.getIdElement()).execute();
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(1, ourUpdatedObservations.size());

24
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test.java
View File

@ -64,7 +64,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
ourUpdatedObservations.clear();
}
private Subscription createSubscription(String criteria, String payload, String endpoint) {
private Subscription createSubscription(String criteria, String payload, String endpoint) throws InterruptedException {
Subscription subscription = new Subscription();
subscription.setReason("Monitor new neonatal function (note, age will be determined by the monitor)");
subscription.setStatus(Subscription.SubscriptionStatus.ACTIVE);
@ -79,10 +79,19 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
MethodOutcome methodOutcome = ourClient.create().resource(subscription).execute();
subscription.setId(methodOutcome.getId().getIdPart());
waitForQueueToDrain();
return subscription;
}
private Observation sendObservation(String code, String system) {
private void waitForQueueToDrain() throws InterruptedException {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size() > 0) {
Thread.sleep(250);
}
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
}
private Observation sendObservation(String code, String system) throws InterruptedException {
Observation observation = new Observation();
CodeableConcept codeableConcept = new CodeableConcept();
observation.setCode(codeableConcept);
@ -97,6 +106,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
String observationId = methodOutcome.getId().getIdPart();
observation.setId(observationId);
waitForQueueToDrain();
return observation;
}
@ -187,7 +197,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
Observation observation1 = sendObservation(code, "SNOMED-CT");
// Should see 1 subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(1, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -201,7 +211,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
Observation observation2 = sendObservation(code, "SNOMED-CT");
// Should see two subscription notifications
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(3, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -210,7 +220,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
Observation observationTemp3 = sendObservation(code, "SNOMED-CT");
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -223,7 +233,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
ourClient.update().resource(observation3).withId(observation3.getIdElement()).execute();
// Should see no subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -237,7 +247,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigDstu3Test extends B
ourClient.update().resource(observation3a).withId(observation3a.getIdElement()).execute();
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(1, ourUpdatedObservations.size());

6
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/r4/RestHookTestR4Test.java
View File

@ -316,11 +316,11 @@ public class RestHookTestR4Test extends BaseResourceProviderR4Test {
}
private void waitForQueueToDrain() throws InterruptedException {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueue().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueue().size() > 0) {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size() > 0) {
Thread.sleep(250);
}
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueue().size());
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
}
@BeforeClass

33
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/r4/RestHookTestWithInterceptorRegisteredToDaoConfigR4Test.java
View File

@ -64,7 +64,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
ourUpdatedObservations.clear();
}
private Subscription createSubscription(String criteria, String payload, String endpoint) {
private Subscription createSubscription(String criteria, String payload, String endpoint) throws InterruptedException {
Subscription subscription = new Subscription();
subscription.setReason("Monitor new neonatal function (note, age will be determined by the monitor)");
subscription.setStatus(Subscription.SubscriptionStatus.ACTIVE);
@ -79,10 +79,19 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
MethodOutcome methodOutcome = ourClient.create().resource(subscription).execute();
subscription.setId(methodOutcome.getId().getIdPart());
waitForQueueToDrain();
return subscription;
}
private Observation sendObservation(String code, String system) {
private void waitForQueueToDrain() throws InterruptedException {
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
while (ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size() > 0) {
Thread.sleep(250);
}
ourLog.info("QUEUE HAS {} ITEMS", ourRestHookSubscriptionInterceptor.getExecutorQueueForUnitTests().size());
}
private Observation sendObservation(String code, String system) throws InterruptedException {
Observation observation = new Observation();
CodeableConcept codeableConcept = new CodeableConcept();
observation.setCode(codeableConcept);
@ -97,6 +106,8 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
String observationId = methodOutcome.getId().getIdPart();
observation.setId(observationId);
waitForQueueToDrain();
return observation;
}
@ -117,7 +128,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
Thread.sleep(500);
assertEquals(1, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
Subscription subscriptionTemp = ourClient.read(Subscription.class, subscription2.getId());
Assert.assertNotNull(subscriptionTemp);
@ -131,7 +142,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
Thread.sleep(500);
assertEquals(3, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
ourClient.delete().resourceById(new IdDt("Subscription", subscription2.getId())).execute();
Observation observationTemp3 = sendObservation(code, "SNOMED-CT");
@ -187,10 +198,10 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
Observation observation1 = sendObservation(code, "SNOMED-CT");
// Should see 1 subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(1, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
Subscription subscriptionTemp = ourClient.read(Subscription.class, subscription2.getId());
Assert.assertNotNull(subscriptionTemp);
@ -201,16 +212,16 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
Observation observation2 = sendObservation(code, "SNOMED-CT");
// Should see two subscription notifications
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(3, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
ourClient.delete().resourceById(new IdDt("Subscription", subscription2.getId())).execute();
Observation observationTemp3 = sendObservation(code, "SNOMED-CT");
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -223,7 +234,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
ourClient.update().resource(observation3).withId(observation3.getIdElement()).execute();
// Should see no subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(0, ourUpdatedObservations.size());
@ -237,7 +248,7 @@ public class RestHookTestWithInterceptorRegisteredToDaoConfigR4Test extends Base
ourClient.update().resource(observation3a).withId(observation3a.getIdElement()).execute();
// Should see only one subscription notification
Thread.sleep(500);
waitForQueueToDrain();
assertEquals(4, ourCreatedObservations.size());
assertEquals(1, ourUpdatedObservations.size());

2
hapi-fhir-server/src/main/java/ca/uhn/fhir/rest/server/RestfulServer.java
View File

@ -1326,7 +1326,7 @@ public class RestfulServer extends HttpServlet implements IRestfulServer<Servlet
}
}
if (!newPlainProviders.isEmpty()) {
ourLog.info("Added {} plain provider(s). Total {}", newPlainProviders.size());
ourLog.info("Added {} plain provider(s). Total {}", newPlainProviders.size(), myPlainProviders.size());
for (Object provider : newPlainProviders) {
assertProviderIsValid(provider);
findResourceMethods(provider);

81
hapi-fhir-structures-r4/src/test/java/ca/uhn/fhir/rest/server/GraphQLR4ProviderTest.java
View File

@ -24,7 +24,10 @@ import org.hl7.fhir.r4.hapi.rest.server.GraphQLProvider;
import org.hl7.fhir.r4.model.*;
import org.hl7.fhir.r4.utils.GraphQLEngine;
import org.hl7.fhir.utilities.graphql.Argument;
import org.junit.*;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.BeforeClass;
import org.junit.Test;
import java.nio.charset.StandardCharsets;
import java.util.ArrayList;
@ -106,7 +109,6 @@ public class GraphQLR4ProviderTest {
}
@Test
@Ignore
public void testGraphSystemInstance() throws Exception {
String query = "{Patient(id:123){id,name{given,family}}}";
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/$graphql?query=" + UrlUtil.escape(query));
@ -117,12 +119,14 @@ public class GraphQLR4ProviderTest {
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals("{\n" +
" \"name\":[{\n" +
" \"family\":\"FAMILY\",\n" +
" \"given\":[\"GIVEN1\",\"GIVEN2\"]\n" +
" },{\n" +
" \"given\":[\"GivenOnly1\",\"GivenOnly2\"]\n" +
" }]\n" +
" \"Patient\":{\n" +
" \"name\":[{\n" +
" \"given\":[\"GIVEN1\",\"GIVEN2\"],\n" +
" \"family\":\"FAMILY\"\n" +
" },{\n" +
" \"given\":[\"GivenOnly1\",\"GivenOnly2\"]\n" +
" }]\n" +
" }\n" +
"}", responseContent);
assertThat(status.getFirstHeader(Constants.HEADER_CONTENT_TYPE).getValue(), startsWith("application/json"));
@ -133,7 +137,6 @@ public class GraphQLR4ProviderTest {
}
@Test
@Ignore
public void testGraphSystemList() throws Exception {
String query = "{PatientList(name:\"pet\"){name{family,given}}}";
HttpGet httpGet = new HttpGet("http://localhost:" + ourPort + "/$graphql?query=" + UrlUtil.escape(query));
@ -144,11 +147,17 @@ public class GraphQLR4ProviderTest {
assertEquals(200, status.getStatusLine().getStatusCode());
assertEquals("{\n" +
" \"name\":[{\n" +
" \"family\":\"FAMILY\",\n" +
" \"given\":[\"GIVEN1\",\"GIVEN2\"]\n" +
" \"PatientList\":[{\n" +
" \"name\":[{\n" +
" \"family\":\"pet\",\n" +
" \"given\":[\"GIVEN1\",\"GIVEN2\"]\n" +
" },{\n" +
" \"given\":[\"GivenOnly1\",\"GivenOnly2\"]\n" +
" }]\n" +
" },{\n" +
" \"given\":[\"GivenOnly1\",\"GivenOnly2\"]\n" +
" \"name\":[{\n" +
" \"given\":[\"GivenOnlyB1\",\"GivenOnlyB2\"]\n" +
" }]\n" +
" }]\n" +
"}", responseContent);
assertThat(status.getFirstHeader(Constants.HEADER_CONTENT_TYPE).getValue(), startsWith("application/json"));
@ -209,24 +218,22 @@ public class GraphQLR4ProviderTest {
private static class MyStorageServices implements GraphQLEngine.IGraphQLStorageServices {
@Override
public ReferenceResolution lookup(Object appInfo, Resource context, Reference reference) throws FHIRException {
ourLog.info("lookup from {} to {}", context.getIdElement().getValue(), reference.getReference());
public ReferenceResolution lookup(Object theAppInfo, Resource theContext, Reference theReference) throws FHIRException {
ourLog.info("lookup from {} to {}", theContext.getIdElement().getValue(), theReference.getReference());
return null;
}
@Override
public Resource lookup(Object appInfo, String type, String id) throws FHIRException {
ourLog.info("lookup {}/{}", type, id);
public Resource lookup(Object theAppInfo, String theType, String theId) throws FHIRException {
ourLog.info("lookup {}/{}", theType, theId);
if (type.equals("Patient") && id.equals("123")) {
if (theType.equals("Patient") && theId.equals("123")) {
Patient p = new Patient();
p
.addName()
p.addName()
.setFamily("FAMILY")
.addGiven("GIVEN1")
.addGiven("GIVEN2");
p
.addName()
p.addName()
.addGiven("GivenOnly1")
.addGiven("GivenOnly2");
return p;
@ -236,13 +243,35 @@ public class GraphQLR4ProviderTest {
}
@Override
public void listResources(Object appInfo, String type, List<Argument> searchParams, List<Resource> matches) throws FHIRException {
ourLog.info("listResources of {} - {}", type, searchParams);
public void listResources(Object theAppInfo, String theType, List<Argument> theSearchParams, List<Resource> theMatches) throws FHIRException {
ourLog.info("listResources of {} - {}", theType, theSearchParams);
if (theSearchParams.size() == 1) {
String name = theSearchParams.get(0).getName();
if ("name".equals(name)) {
Patient p = new Patient();
p.addName()
.setFamily(theSearchParams.get(0).getValues().get(0).toString())
.addGiven("GIVEN1")
.addGiven("GIVEN2");
p.addName()
.addGiven("GivenOnly1")
.addGiven("GivenOnly2");
theMatches.add(p);
p = new Patient();
p.addName()
.addGiven("GivenOnlyB1")
.addGiven("GivenOnlyB2");
theMatches.add(p);
}
}
}
@Override
public Bundle search(Object appInfo, String type, List<Argument> searchParams) throws FHIRException {
ourLog.info("search on {} - {}", type, searchParams);
public Bundle search(Object theAppInfo, String theType, List<Argument> theSearchParams) throws FHIRException {
ourLog.info("search on {} - {}", theType, theSearchParams);
return null;
}
}

6
pom.xml
View File

@ -384,7 +384,7 @@
<hibernate_version>5.2.10.Final</hibernate_version>
<hibernate_validator_version>5.4.1.Final</hibernate_validator_version>
<!-- Update lucene version when you update hibernate-search version -->
<hibernate_search_version>5.7.0.Final</hibernate_search_version>
<hibernate_search_version>5.7.1.Final</hibernate_search_version>
<lucene_version>5.5.4</lucene_version>
<maven_assembly_plugin_version>2.5.3</maven_assembly_plugin_version>
<maven_license_plugin_version>1.8</maven_license_plugin_version>
@ -451,7 +451,7 @@
<dependency>
<groupId>com.squareup.okhttp3</groupId>
<artifactId>okhttp</artifactId>
<version>3.4.1</version>
<version>3.8.1</version>
</dependency>
<dependency>
<groupId>commons-cli</groupId>
@ -877,7 +877,7 @@
<dependency>
<groupId>org.springframework.data</groupId>
<artifactId>spring-data-jpa</artifactId>
<version>1.10.4.RELEASE</version>
<version>1.11.6.RELEASE</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>

7
src/changes/changes.xml
View File

@ -19,8 +19,11 @@
<li>Apache HttpCore (FHIR Client): 4.4.5 -&gt; 4.4.6</li>
<li>Phloc Commons (Schematron Validator): 4.4.6 -&gt; 4.4.11</li>
<li>Hibernate (JPA): 5.2.9 -&gt; 5.2.10</li>
<li>Spring (JPA): 4.3.7.RELEASE -&gt; 4.3.10.RELEASE</li>
<li>Thymeleaf (Testpage Overlay): 3.0.2.RELEASE -&gt; 3.0.7.RELEASE</li>
<li>Hibernate Search (JPA): 5.7.0 -&gt; 5.7.1</li>
<li>Spring (JPA): 4.3.7 -&gt; 4.3.10</li>
<li>Spring Data JPA (JPA): 1.10.4 -&gt; 1.11.6</li>
<li>Thymeleaf (Testpage Overlay): 3.0.2 -&gt; 3.0.7</li>
<li>OkHttp (Android): 3.4.1 -&gt; 3.8.1</li>
</ul>
]]>
</action>