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Merge branch 'schematron-questionnaire-que-7' of https://github.com/hdconradi/hapi-fhir into hdconradi-schematron-questionnaire-que-7

This commit is contained in:
James Agnew 2018-03-05 08:29:57 -05:00
parent e201091e3a f4fa233ad7
commit 1fcfc13dca
4 changed files with 257 additions and 2 deletions
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2
hapi-fhir-validation-resources-dstu3/src/main/resources/org/hl7/fhir/dstu3/model/schema/fhir-invariants.sch
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@ -4503,7 +4503,7 @@
<sch:assert test="not((f:type/@value='group' and not(f:item)) or (f:type/@value='display' and f:item))">que-1: Group items must have nested items, display items cannot have nested items</sch:assert>
</sch:rule>
<sch:rule context="f:Questionnaire/f:item/f:enableWhen">
<sch:assert test="count(f:*[starts-with(local-name(.), 'answer')]|self::f:hasAnswer) = 1">que-7: enableWhen must contain either a 'answer' or a 'hasAnswer' element</sch:assert>
<sch:assert test="count(f:*[starts-with(local-name(.), 'answer')]|f:hasAnswer) = 1">que-7: enableWhen must contain either a 'answer' or a 'hasAnswer' element</sch:assert>
</sch:rule>
<sch:rule context="f:Questionnaire/f:item/f:enableWhen/f:answerAttachment">
<sch:assert test="not(exists(f:data)) or exists(f:contentType)">att-1: It the Attachment has data, it SHALL have a contentType</sch:assert>

2
hapi-fhir-validation-resources-dstu3/src/main/resources/org/hl7/fhir/dstu3/model/schema/questionnaire.sch
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@ -76,7 +76,7 @@
<sch:assert test="not((f:type/@value='group' and not(f:item)) or (f:type/@value='display' and f:item))">que-1: Group items must have nested items, display items cannot have nested items</sch:assert>
</sch:rule>
<sch:rule context="f:Questionnaire/f:item/f:enableWhen">
<sch:assert test="count(f:*[starts-with(local-name(.), 'answer')]|self::f:hasAnswer) = 1">que-7: enableWhen must contain either a 'answer' or a 'hasAnswer' element</sch:assert>
<sch:assert test="count(f:*[starts-with(local-name(.), 'answer')]|f:hasAnswer) = 1">que-7: enableWhen must contain either a 'answer' or a 'hasAnswer' element</sch:assert>
</sch:rule>
<sch:rule context="f:Questionnaire/f:item/f:enableWhen/f:answerAttachment">
<sch:assert test="not(exists(f:data)) or exists(f:contentType)">att-1: It the Attachment has data, it SHALL have a contentType</sch:assert>

126
hapi-fhir-validation/src/test/java/org/hl7/fhir/dstu3/hapi/validation/SchematronValidationDstu3QuestionnaireTest.java Normal file
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@ -0,0 +1,126 @@
package org.hl7.fhir.dstu3.hapi.validation;
import static org.hamcrest.Matchers.containsString;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.assertTrue;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.util.TestUtil;
import ca.uhn.fhir.validation.FhirValidator;
import ca.uhn.fhir.validation.ValidationResult;
import org.hl7.fhir.dstu3.model.Enumerations;
import org.hl7.fhir.dstu3.model.Questionnaire;
import org.hl7.fhir.dstu3.model.Questionnaire.QuestionnaireItemComponent;
import org.hl7.fhir.dstu3.model.Questionnaire.QuestionnaireItemEnableWhenComponent;
import org.hl7.fhir.dstu3.model.Questionnaire.QuestionnaireItemType;
import org.hl7.fhir.dstu3.model.StringType;
import org.junit.AfterClass;
import org.junit.Test;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
public class SchematronValidationDstu3QuestionnaireTest {
private static final Logger ourLog = LoggerFactory.getLogger(SchematronValidationDstu3QuestionnaireTest.class);
private static FhirContext ourCtx = FhirContext.forDstu3();
private static int linkIdCnt = 1;
@Test
public void enableWhenWithAnswer() {
Questionnaire resource = new Questionnaire();
resource.setStatus(Enumerations.PublicationStatus.ACTIVE);
QuestionnaireItemComponent child1 = createItem(QuestionnaireItemType.GROUP);
resource.addItem(child1);
QuestionnaireItemEnableWhenComponent enableWhen = new QuestionnaireItemEnableWhenComponent();
enableWhen.setQuestion("q1");
enableWhen.setAnswer(new StringType("a value"));
child1.addEnableWhen(enableWhen);
QuestionnaireItemComponent child21 = createItem(QuestionnaireItemType.STRING);
child1.addItem(child21);
String inputXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resource);
ourLog.info(inputXml);
ValidationResult result = validateSchematron(resource);
assertTrue(result.isSuccessful());
}
@Test
public void enableWhenWithHasAnswer() {
Questionnaire resource = new Questionnaire();
resource.setStatus(Enumerations.PublicationStatus.ACTIVE);
QuestionnaireItemComponent child1 = createItem(QuestionnaireItemType.GROUP);
resource.addItem(child1);
QuestionnaireItemEnableWhenComponent enableWhen = new QuestionnaireItemEnableWhenComponent();
enableWhen.setQuestion("q1");
enableWhen.setHasAnswer(true);
child1.addEnableWhen(enableWhen);
QuestionnaireItemComponent child21 = createItem(QuestionnaireItemType.STRING);
child1.addItem(child21);
String inputXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resource);
ourLog.info(inputXml);
ValidationResult result = validateSchematron(resource);
assertTrue(result.isSuccessful());
}
@Test
public void enableWhenWithHasAnswerAndAnswer() {
Questionnaire resource = new Questionnaire();
resource.setStatus(Enumerations.PublicationStatus.ACTIVE);
QuestionnaireItemComponent child1 = createItem(QuestionnaireItemType.GROUP);
resource.addItem(child1);
QuestionnaireItemEnableWhenComponent enableWhen = new QuestionnaireItemEnableWhenComponent();
enableWhen.setQuestion("q1");
enableWhen.setAnswer(new StringType("a value"));
enableWhen.setHasAnswer(true);
child1.addEnableWhen(enableWhen);
QuestionnaireItemComponent child21 = createItem(QuestionnaireItemType.STRING);
child1.addItem(child21);
String inputXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resource);
ourLog.info(inputXml);
ValidationResult result = validateSchematron(resource);
assertFalse(result.isSuccessful());
assertEquals(1, result.getMessages().size());
assertThat(result.getMessages().get(0).getMessage(), containsString("que-7"));
}
private QuestionnaireItemComponent createItem(QuestionnaireItemType type) {
QuestionnaireItemComponent item = new QuestionnaireItemComponent();
item.setLinkId("id-" + linkIdCnt++);
item.setType(type);
return item;
}
private ValidationResult validateSchematron(Questionnaire resource) {
FhirValidator val = ourCtx.newValidator();
val.setValidateAgainstStandardSchema(false);
val.setValidateAgainstStandardSchematron(true);
ValidationResult result = val.validateWithResult(resource);
String outcomeXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(result.toOperationOutcome());
ourLog.info(outcomeXml);
return result;
}
@AfterClass
public static void afterClassClearContext() {
TestUtil.clearAllStaticFieldsForUnitTest();
}
}

129
hapi-fhir-validation/src/test/java/org/hl7/fhir/r4/validation/SchematronValidationR4QuestionnaireTest.java Normal file
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@ -0,0 +1,129 @@
package org.hl7.fhir.r4.validation;
import static org.hamcrest.Matchers.containsString;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertThat;
import static org.junit.Assert.assertTrue;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.util.TestUtil;
import ca.uhn.fhir.validation.FhirValidator;
import ca.uhn.fhir.validation.ValidationResult;
import org.hl7.fhir.r4.model.Enumerations;
import org.hl7.fhir.r4.model.Questionnaire;
import org.hl7.fhir.r4.model.Questionnaire.QuestionnaireItemComponent;
import org.hl7.fhir.r4.model.Questionnaire.QuestionnaireItemEnableWhenComponent;
import org.hl7.fhir.r4.model.Questionnaire.QuestionnaireItemType;
import org.hl7.fhir.r4.model.StringType;
import org.junit.AfterClass;
import org.junit.Ignore;
import org.junit.Test;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
@Ignore("Requires a valid schematron file, e.g. bei merging pull request #869")
public class SchematronValidationR4QuestionnaireTest {
private static final Logger ourLog = LoggerFactory.getLogger(SchematronValidationR4QuestionnaireTest.class);
private static FhirContext ourCtx = FhirContext.forR4();
private static int linkIdCnt = 1;
@Test
public void enableWhenWithAnswer() {
Questionnaire resource = new Questionnaire();
resource.setStatus(Enumerations.PublicationStatus.ACTIVE);
QuestionnaireItemComponent child1 = createItem(QuestionnaireItemType.GROUP);
resource.addItem(child1);
QuestionnaireItemEnableWhenComponent enableWhen = new QuestionnaireItemEnableWhenComponent();
enableWhen.setQuestion("q1");
enableWhen.setAnswer(new StringType("a value"));
child1.addEnableWhen(enableWhen);
QuestionnaireItemComponent child21 = createItem(QuestionnaireItemType.STRING);
child1.addItem(child21);
String inputXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resource);
ourLog.info(inputXml);
ValidationResult result = validateSchematron(resource);
assertTrue(result.isSuccessful());
}
@Test
public void enableWhenWithHasAnswer() {
Questionnaire resource = new Questionnaire();
resource.setStatus(Enumerations.PublicationStatus.ACTIVE);
QuestionnaireItemComponent child1 = createItem(QuestionnaireItemType.GROUP);
resource.addItem(child1);
QuestionnaireItemEnableWhenComponent enableWhen = new QuestionnaireItemEnableWhenComponent();
enableWhen.setQuestion("q1");
enableWhen.setHasAnswer(true);
child1.addEnableWhen(enableWhen);
QuestionnaireItemComponent child21 = createItem(QuestionnaireItemType.STRING);
child1.addItem(child21);
String inputXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resource);
ourLog.info(inputXml);
ValidationResult result = validateSchematron(resource);
assertTrue(result.isSuccessful());
}
@Test
public void enableWhenWithHasAnswerAndAnswer() {
Questionnaire resource = new Questionnaire();
resource.setStatus(Enumerations.PublicationStatus.ACTIVE);
QuestionnaireItemComponent child1 = createItem(QuestionnaireItemType.GROUP);
resource.addItem(child1);
QuestionnaireItemEnableWhenComponent enableWhen = new QuestionnaireItemEnableWhenComponent();
enableWhen.setQuestion("q1");
enableWhen.setAnswer(new StringType("a value"));
enableWhen.setHasAnswer(true);
child1.addEnableWhen(enableWhen);
QuestionnaireItemComponent child21 = createItem(QuestionnaireItemType.STRING);
child1.addItem(child21);
String inputXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resource);
ourLog.info(inputXml);
ValidationResult result = validateSchematron(resource);
assertFalse(result.isSuccessful());
assertEquals(1, result.getMessages().size());
assertThat(result.getMessages().get(0).getMessage(), containsString("que-7"));
}
private QuestionnaireItemComponent createItem(QuestionnaireItemType type) {
QuestionnaireItemComponent item = new QuestionnaireItemComponent();
item.setLinkId("id-" + linkIdCnt++);
item.setType(type);
return item;
}
private ValidationResult validateSchematron(Questionnaire resource) {
FhirValidator val = ourCtx.newValidator();
val.setValidateAgainstStandardSchema(false);
val.setValidateAgainstStandardSchematron(true);
ValidationResult result = val.validateWithResult(resource);
String outcomeXml = ourCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(result.toOperationOutcome());
ourLog.info(outcomeXml);
return result;
}
@AfterClass
public static void afterClassClearContext() {
TestUtil.clearAllStaticFieldsForUnitTest();
}
}