code coverage needs to run only for JACOCO PROFILE (#4230)
* code coverage needs to run only for JACOCO PROFILE * remove ALLMODULES profile since it is default now
This commit is contained in:
VK-SMILECDR
GitHub
parent
1b55f49a60
commit
27ec3bec79
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@ -11,7 +11,7 @@ import java.util.HashMap;
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import java.util.Map;
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/**
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* mvn -P CI,ALLMODULES checkstyle:check
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* mvn -P CI checkstyle:check
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*/
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@StatelessCheck
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public final class HapiErrorCodeCheck extends AbstractCheck {
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@ -41,7 +41,7 @@ Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.19.1:tes
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This typically means that your build is running out of memory. HAPI's unit tests execute by default in multiple threads (the thread count is determined by the number of CPU cores available) so in an environment with lots of cores but not enough RAM, you may run out. If you are getting this error, try executing the build with the following arguments:
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```
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mvn -P ALLMODULES,NOPARALLEL install
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mvn -P NOPARALLEL install
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```
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See [Hacking HAPI FHIR](/docs/contributing/hacking_guide.html) for more information on the build process.
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@ -66,7 +66,7 @@ If the build fails to execute successfully, try the following:
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* If the build fails with memory issues (or mysteriously dies during unit tests), your build environment may be running out of memory. By default, the HAPI build executes unit tests in multiple parallel JVMs in order to save time. This can consume a lot of RAM and sometimes causes issues. Try executing with the following command to disable this behaviour:
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```bash
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mvn -P ALLMODULES,NOPARALLEL install
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mvn -P NOPARALLEL install
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```
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* If you figure something else out, please <b>let us know</b> so that we can add it to this list!
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@ -17,9 +17,41 @@
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<artifactId>hapi-fhir-jacoco</artifactId>
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<packaging>jar</packaging>
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<name>HAPI FHIR - JaCoCo Test Coverage</name>
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<profiles>
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<profile>
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<id>JACOCO</id>
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<activation>
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<activeByDefault>false</activeByDefault>
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</activation>
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<build>
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<plugins>
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<plugin>
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<groupId>org.jacoco</groupId>
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<artifactId>jacoco-maven-plugin</artifactId>
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<executions>
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<execution>
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<id>post-integration-test</id>
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<phase>verify</phase>
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<goals>
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<goal>report-aggregate</goal>
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</goals>
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<configuration>
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<outputDirectory>${project.reporting.outputDirectory}/jacoco-report</outputDirectory>
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</configuration>
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</execution>
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</executions>
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</plugin>
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-checkstyle-plugin</artifactId>
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<configuration>
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<skip>true</skip>
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</configuration>
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</plugin>
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</plugins>
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</build>
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<dependencies>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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@ -121,16 +153,14 @@
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<artifactId>hapi-fhir-jpaserver-test-r5</artifactId>
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<version>${project.version}</version>
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</dependency>
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<!-- TODO KHS temporarily disable these tests because they are blocking ci
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-jpaserver-elastic-test-utilities</artifactId>
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<version>${project.version}</version>
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</dependency>
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-->
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<!-- TODO KHS temporarily disable these tests because they are blocking ci -->
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<!--
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-jpaserver-elastic-test-utilities</artifactId>
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<version>${project.version}</version>
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</dependency>
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-->
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-client-okhttp</artifactId>
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@ -162,35 +192,6 @@
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<version>${project.version}</version>
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</dependency>
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</dependencies>
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<properties>
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</properties>
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<build>
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<plugins>
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<plugin>
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<groupId>org.jacoco</groupId>
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<artifactId>jacoco-maven-plugin</artifactId>
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<executions>
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<execution>
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<id>post-integration-test</id>
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<phase>verify</phase>
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<goals>
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<goal>report-aggregate</goal>
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</goals>
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<configuration>
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<outputDirectory>${project.reporting.outputDirectory}/jacoco-report</outputDirectory>
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</configuration>
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</execution>
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</executions>
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</plugin>
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-checkstyle-plugin</artifactId>
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<configuration>
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<skip>true</skip>
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</configuration>
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</plugin>
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</plugins>
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</build>
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</profile>
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</profiles>
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</project>
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2
lgtm.yml
2
lgtm.yml
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@ -6,5 +6,5 @@ extraction:
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maven:
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version: 3.8.4
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build_command:
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- mvn -P ALLMODULES,LGTM -Dmaven.test.skip install
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- mvn -P LGTM -Dmaven.test.skip install
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137
pom.xml
137
pom.xml
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@ -57,6 +57,68 @@
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</repository>
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</repositories>
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<modules>
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<module>hapi-fhir-checkstyle</module>
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<module>hapi-fhir-bom</module>
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<module>hapi-deployable-pom</module>
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<module>hapi-fhir-base</module>
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<module>hapi-fhir-docs</module>
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<module>hapi-fhir-test-utilities</module>
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<module>hapi-fhir-jpaserver-test-utilities</module>
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<module>hapi-fhir-jpaserver-test-dstu2</module>
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<module>hapi-fhir-jpaserver-test-dstu3</module>
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<module>hapi-fhir-jpaserver-test-r4</module>
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<module>hapi-fhir-jpaserver-test-r4b</module>
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<module>hapi-fhir-jpaserver-test-r5</module>
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<module>hapi-fhir-jpaserver-elastic-test-utilities</module>
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<module>hapi-tinder-plugin</module>
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<module>hapi-tinder-test</module>
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<module>hapi-fhir-client</module>
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<module>hapi-fhir-server</module>
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<module>hapi-fhir-server-mdm</module>
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<module>hapi-fhir-server-openapi</module>
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<module>hapi-fhir-converter</module>
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<module>hapi-fhir-validation</module>
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<module>hapi-fhir-structures-dstu2</module>
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<module>hapi-fhir-structures-hl7org-dstu2</module>
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<module>hapi-fhir-validation-resources-dstu2</module>
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<module>hapi-fhir-structures-dstu2.1</module>
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<module>hapi-fhir-validation-resources-dstu2.1</module>
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<module>hapi-fhir-structures-dstu3</module>
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<module>hapi-fhir-validation-resources-dstu3</module>
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<module>hapi-fhir-structures-r4</module>
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<module>hapi-fhir-validation-resources-r4</module>
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<module>hapi-fhir-structures-r4b</module>
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<module>hapi-fhir-structures-r5</module>
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<module>hapi-fhir-validation-resources-r5</module>
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<module>hapi-fhir-jpa</module>
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<module>hapi-fhir-storage</module>
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<module>hapi-fhir-storage-batch2</module>
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<module>hapi-fhir-storage-batch2-jobs</module>
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<module>hapi-fhir-storage-mdm</module>
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<module>hapi-fhir-storage-test-utilities</module>
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<module>hapi-fhir-jpaserver-cql</module>
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<module>hapi-fhir-jpaserver-model</module>
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<module>hapi-fhir-jpaserver-searchparam</module>
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<module>hapi-fhir-jpaserver-subscription</module>
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<module>hapi-fhir-jaxrsserver-base</module>
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<module>hapi-fhir-batch</module>
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<module>hapi-fhir-jpaserver-base</module>
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<module>hapi-fhir-sql-migrate</module>
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<module>hapi-fhir-jpaserver-mdm</module>
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<module>hapi-fhir-testpage-overlay</module>
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<module>hapi-fhir-jpaserver-uhnfhirtest</module>
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<module>hapi-fhir-client-okhttp</module>
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<module>hapi-fhir-android</module>
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<module>hapi-fhir-cli</module>
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<module>hapi-fhir-dist</module>
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<module>tests/hapi-fhir-base-test-jaxrsserver-kotlin</module>
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<module>tests/hapi-fhir-base-test-mindeps-client</module>
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<module>tests/hapi-fhir-base-test-mindeps-server</module>
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<module>hapi-fhir-spring-boot</module>
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<module>hapi-fhir-jacoco</module>
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</modules>
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<dependencies>
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<dependency>
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<groupId>org.junit.jupiter</groupId>
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@ -873,6 +935,9 @@
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<maven.compiler.testSource>17</maven.compiler.testSource>
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<maven.compiler.testTarget>17</maven.compiler.testTarget>
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<maven.compiler.testRelease>17</maven.compiler.testRelease>
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<!-- Jacoco -->
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<argLine></argLine>
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</properties>
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<dependencyManagement>
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@ -2594,6 +2659,8 @@
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</execution>
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</executions>
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</plugin>
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<!-- FIXME This activates jacoco all the time - need to add profile -->
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<!--
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<plugin>
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<groupId>org.jacoco</groupId>
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<artifactId>jacoco-maven-plugin</artifactId>
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@ -2609,6 +2676,7 @@
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</execution>
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</executions>
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</plugin>
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-->
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</plugins>
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</build>
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@ -2719,77 +2787,8 @@
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</plugins>
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</build>
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</profile>
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<profile>
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<id>ALLMODULES</id>
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<activation>
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<activeByDefault>true</activeByDefault>
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</activation>
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<modules>
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<module>hapi-fhir-checkstyle</module>
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<module>hapi-fhir-bom</module>
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<module>hapi-deployable-pom</module>
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<module>hapi-fhir-base</module>
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<module>hapi-fhir-docs</module>
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<module>hapi-fhir-test-utilities</module>
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<module>hapi-fhir-jpaserver-test-utilities</module>
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<module>hapi-fhir-jpaserver-test-dstu2</module>
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<module>hapi-fhir-jpaserver-test-dstu3</module>
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<module>hapi-fhir-jpaserver-test-r4</module>
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<module>hapi-fhir-jpaserver-test-r4b</module>
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<module>hapi-fhir-jpaserver-test-r5</module>
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<module>hapi-fhir-jpaserver-elastic-test-utilities</module>
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<module>hapi-tinder-plugin</module>
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<module>hapi-tinder-test</module>
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<module>hapi-fhir-client</module>
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<module>hapi-fhir-server</module>
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<module>hapi-fhir-server-mdm</module>
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<module>hapi-fhir-server-openapi</module>
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<module>hapi-fhir-converter</module>
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<module>hapi-fhir-validation</module>
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<module>hapi-fhir-structures-dstu2</module>
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<module>hapi-fhir-structures-hl7org-dstu2</module>
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<module>hapi-fhir-validation-resources-dstu2</module>
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<module>hapi-fhir-structures-dstu2.1</module>
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<module>hapi-fhir-validation-resources-dstu2.1</module>
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<module>hapi-fhir-structures-dstu3</module>
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<module>hapi-fhir-validation-resources-dstu3</module>
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<module>hapi-fhir-structures-r4</module>
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<module>hapi-fhir-validation-resources-r4</module>
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<module>hapi-fhir-structures-r4b</module>
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<module>hapi-fhir-structures-r5</module>
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<module>hapi-fhir-validation-resources-r5</module>
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<module>hapi-fhir-jpa</module>
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<module>hapi-fhir-storage</module>
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<module>hapi-fhir-storage-batch2</module>
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<module>hapi-fhir-storage-batch2-jobs</module>
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<module>hapi-fhir-storage-mdm</module>
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<module>hapi-fhir-storage-test-utilities</module>
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<module>hapi-fhir-jpaserver-cql</module>
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<module>hapi-fhir-jpaserver-model</module>
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<module>hapi-fhir-jpaserver-searchparam</module>
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<module>hapi-fhir-jpaserver-subscription</module>
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<module>hapi-fhir-jaxrsserver-base</module>
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<module>hapi-fhir-batch</module>
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<module>hapi-fhir-jpaserver-base</module>
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<module>hapi-fhir-sql-migrate</module>
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<module>hapi-fhir-jpaserver-mdm</module>
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<module>hapi-fhir-testpage-overlay</module>
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<module>hapi-fhir-jpaserver-uhnfhirtest</module>
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<module>hapi-fhir-client-okhttp</module>
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<module>hapi-fhir-android</module>
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<module>hapi-fhir-cli</module>
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<module>hapi-fhir-dist</module>
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<module>tests/hapi-fhir-base-test-jaxrsserver-kotlin</module>
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<module>tests/hapi-fhir-base-test-mindeps-client</module>
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<module>tests/hapi-fhir-base-test-mindeps-server</module>
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<module>hapi-fhir-spring-boot</module>
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</modules>
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</profile>
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<profile>
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<id>JACOCO</id>
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<modules>
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<module>hapi-fhir-jacoco</module>
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</modules>
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<build>
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<plugins>
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<plugin>
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@ -170,7 +170,7 @@ jobs:
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inputs:
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goals: 'clean install'
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# These are Maven CLI options (and show up in the build logs) - "-nsu"=Don't update snapshots. We can remove this when Maven OSS is more healthy
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options: '-P ALLMODULES,JACOCO,CI,ERRORPRONE -e -B -Dmaven.repo.local=$(MAVEN_CACHE_FOLDER) -Dmaven.wagon.http.pool=false -Dhttp.keepAlive=false -Dstyle.color=always -Djansi.force=true'
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options: '-P JACOCO,CI,ERRORPRONE -e -B -Dmaven.repo.local=$(MAVEN_CACHE_FOLDER) -Dmaven.wagon.http.pool=false -Dhttp.keepAlive=false -Dstyle.color=always -Djansi.force=true'
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# These are JVM options (and don't show up in the build logs)
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mavenOptions: '-Xmx1024m $(MAVEN_OPTS) -Dorg.slf4j.simpleLogger.showDateTime=true -Dorg.slf4j.simpleLogger.dateTimeFormat=HH:mm:ss,SSS -Duser.timezone=America/Toronto'
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jdkVersionOption: 1.11
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@ -88,5 +88,5 @@ steps:
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inputs:
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mavenPomFile: '$(System.DefaultWorkingDirectory)/pom.xml'
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goals: deploy
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options: '--settings $(System.DefaultWorkingDirectory)/settings.xml -P DIST,ALLMODULES -DskipTests'
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options: '--settings $(System.DefaultWorkingDirectory)/settings.xml -P DIST -DskipTests'
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publishJUnitResults: false
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@ -27,7 +27,7 @@ jobs:
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inputs:
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goals: 'install'
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# These are Maven CLI options (and show up in the build logs) - "-nsu"=Don't update snapshots. We can remove this when Maven OSS is more healthy
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options: '-P ALLMODULES,CI,FASTINSTALL -e -B -Dmaven.repo.local=$(MAVEN_CACHE_FOLDER) -Dmaven.javadoc.skip=true -Dmaven.wagon.http.pool=false -Dhttp.keepAlive=false -Dstyle.color=always -Djansi.force=true'
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options: '-P CI,FASTINSTALL -e -B -Dmaven.repo.local=$(MAVEN_CACHE_FOLDER) -Dmaven.javadoc.skip=true -Dmaven.wagon.http.pool=false -Dhttp.keepAlive=false -Dstyle.color=always -Djansi.force=true'
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# These are JVM options (and don't show up in the build logs)
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mavenOptions: '-Xmx1024m $(MAVEN_OPTS) -Dorg.slf4j.simpleLogger.showDateTime=true -Dorg.slf4j.simpleLogger.dateTimeFormat=HH:mm:ss,SSS -Duser.timezone=America/Toronto'
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jdkVersionOption: 1.11
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@ -60,7 +60,7 @@ jobs:
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mavenPomFile: '$(System.DefaultWorkingDirectory)/pom.xml'
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goals: 'clean test jacoco:report -pl ${{ p.module }}'
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# These are Maven CLI options (and show up in the build logs) - "-nsu"=Don't update snapshots. We can remove this when Maven OSS is more healthy
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options: '-P ALLMODULES,JACOCO,CI -e -B -Dmaven.repo.local=$(MAVEN_CACHE_FOLDER) -Dmaven.wagon.http.pool=false -Dhttp.keepAlive=false -Dstyle.color=always -Djansi.force=true'
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options: '-P JACOCO,CI -e -B -Dmaven.repo.local=$(MAVEN_CACHE_FOLDER) -Dmaven.wagon.http.pool=false -Dhttp.keepAlive=false -Dstyle.color=always -Djansi.force=true'
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# These are JVM options (and don't show up in the build logs)
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mavenOptions: '-Xmx1024m $(MAVEN_OPTS) -Dorg.slf4j.simpleLogger.showDateTime=true -Dorg.slf4j.simpleLogger.dateTimeFormat=HH:mm:ss,SSS -Duser.timezone=America/Toronto'
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jdkVersionOption: 1.11
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@ -124,7 +124,7 @@ jobs:
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mavenPomFile: '$(System.DefaultWorkingDirectory)/pom.xml'
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goals: 'jacoco:report-aggregate'
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# These are Maven CLI options (and show up in the build logs) - "-nsu"=Don't update snapshots. We can remove this when Maven OSS is more healthy
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options: '-P ALLMODULES,JACOCO'
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options: '-P JACOCO'
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# These are JVM options (and don't show up in the build logs)
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mavenOptions: '-Xmx1024m $(MAVEN_OPTS) -Dorg.slf4j.simpleLogger.showDateTime=true -Dorg.slf4j.simpleLogger.dateTimeFormat=HH:mm:ss,SSS -Duser.timezone=America/Toronto'
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jdkVersionOption: 1.11
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