Merge pull request #624 from CarthageKing/feature-make-bundle-fullurl-override-configurable

Feature make bundle fullurl override configurable
This commit is contained in:
James Agnew 2017-04-17 17:46:45 -04:00 committed by GitHub
commit 282e02801a
11 changed files with 460 additions and 12 deletions

View File

@ -41,6 +41,7 @@ public class ParserOptions {
private boolean myStripVersionsFromReferences = true; private boolean myStripVersionsFromReferences = true;
private Set<String> myDontStripVersionsFromReferencesAtPaths = Collections.emptySet(); private Set<String> myDontStripVersionsFromReferencesAtPaths = Collections.emptySet();
private boolean myOverrideResourceIdWithBundleEntryFullUrl = true;
/** /**
* If supplied value(s), any resource references at the specified paths will have their * If supplied value(s), any resource references at the specified paths will have their
@ -144,4 +145,33 @@ public class ParserOptions {
return myDontStripVersionsFromReferencesAtPaths; return myDontStripVersionsFromReferencesAtPaths;
} }
/**
* If set to <code>true</code> (which is the default), the Bundle.entry.fullUrl will override the Bundle.entry.resource's
* resource id if the fullUrl is defined. This behavior happens when parsing the source data into a Bundle object. Set this
* to <code>false</code> if this is not the desired behavior (e.g. the client code wishes to perform additional
* validation checks between the fullUrl and the resource id).
*
* @return Returns the parser instance's configuration setting for overriding resource ids with Bundle.entry.fullUrl when
* parsing the source data into a Bundle object. Default is <code>true</code>.
*/
public boolean isOverrideResourceIdWithBundleEntryFullUrl() {
return myOverrideResourceIdWithBundleEntryFullUrl;
}
/**
* If set to <code>true</code> (which is the default), the Bundle.entry.fullUrl will override the Bundle.entry.resource's
* resource id if the fullUrl is defined. This behavior happens when parsing the source data into a Bundle object. Set this
* to <code>false</code> if this is not the desired behavior (e.g. the client code wishes to perform additional
* validation checks between the fullUrl and the resource id).
*
* @param theOverrideResourceIdWithBundleEntryFullUrl
* Set this to <code>false</code> to prevent the parser from overriding resource ids with the
* Bundle.entry.fullUrl
*
* @return Returns a reference to <code>this</code> parser so that method calls can be chained together
*/
public ParserOptions setOverrideResourceIdWithBundleEntryFullUrl(boolean theOverrideResourceIdWithBundleEntryFullUrl) {
myOverrideResourceIdWithBundleEntryFullUrl = theOverrideResourceIdWithBundleEntryFullUrl;
return this;
}
} }

View File

@ -97,6 +97,7 @@ public abstract class BaseParser implements IParser {
private List<Class<? extends IBaseResource>> myPreferTypes; private List<Class<? extends IBaseResource>> myPreferTypes;
private String myServerBaseUrl; private String myServerBaseUrl;
private Boolean myStripVersionsFromReferences; private Boolean myStripVersionsFromReferences;
private Boolean myOverrideResourceIdWithBundleEntryFullUrl;
private boolean mySummaryMode; private boolean mySummaryMode;
private boolean mySuppressNarratives; private boolean mySuppressNarratives;
private Set<String> myDontStripVersionsFromReferencesAtPaths; private Set<String> myDontStripVersionsFromReferencesAtPaths;
@ -347,6 +348,15 @@ public abstract class BaseParser implements IParser {
return true; return true;
} }
private boolean isOverrideResourceIdWithBundleEntryFullUrl() {
Boolean overrideResourceIdWithBundleEntryFullUrl = myOverrideResourceIdWithBundleEntryFullUrl;
if (overrideResourceIdWithBundleEntryFullUrl != null) {
return overrideResourceIdWithBundleEntryFullUrl;
}
return myContext.getParserOptions().isOverrideResourceIdWithBundleEntryFullUrl();
}
protected abstract void doEncodeBundleToWriter(Bundle theBundle, Writer theWriter) throws IOException, DataFormatException; protected abstract void doEncodeBundleToWriter(Bundle theBundle, Writer theWriter) throws IOException, DataFormatException;
protected abstract void doEncodeResourceToWriter(IBaseResource theResource, Writer theWriter) throws IOException, DataFormatException; protected abstract void doEncodeResourceToWriter(IBaseResource theResource, Writer theWriter) throws IOException, DataFormatException;
@ -597,6 +607,11 @@ public abstract class BaseParser implements IParser {
return myStripVersionsFromReferences; return myStripVersionsFromReferences;
} }
@Override
public Boolean getOverrideResourceIdWithBundleEntryFullUrl() {
return myOverrideResourceIdWithBundleEntryFullUrl;
}
@Override @Override
public boolean isSummaryMode() { public boolean isSummaryMode() {
return mySummaryMode; return mySummaryMode;
@ -658,6 +673,7 @@ public abstract class BaseParser implements IParser {
if (fullUrlChild == null) { if (fullUrlChild == null) {
continue; // TODO: remove this once the data model in tinder plugin catches up to 1.2 continue; // TODO: remove this once the data model in tinder plugin catches up to 1.2
} }
if (isOverrideResourceIdWithBundleEntryFullUrl()) {
List<IBase> fullUrl = fullUrlChild.getAccessor().getValues(nextEntry); List<IBase> fullUrl = fullUrlChild.getAccessor().getValues(nextEntry);
if (fullUrl != null && !fullUrl.isEmpty()) { if (fullUrl != null && !fullUrl.isEmpty()) {
IPrimitiveType<?> value = (IPrimitiveType<?>) fullUrl.get(0); IPrimitiveType<?> value = (IPrimitiveType<?>) fullUrl.get(0);
@ -673,7 +689,7 @@ public abstract class BaseParser implements IParser {
} }
} }
} }
}
} }
} }
@ -877,6 +893,12 @@ public abstract class BaseParser implements IParser {
return this; return this;
} }
@Override
public IParser setOverrideResourceIdWithBundleEntryFullUrl(Boolean theOverrideResourceIdWithBundleEntryFullUrl) {
myOverrideResourceIdWithBundleEntryFullUrl = theOverrideResourceIdWithBundleEntryFullUrl;
return this;
}
@Override @Override
public IParser setDontStripVersionsFromReferencesAtPaths(String... thePaths) { public IParser setDontStripVersionsFromReferencesAtPaths(String... thePaths) {
if (thePaths == null) { if (thePaths == null) {

View File

@ -129,6 +129,19 @@ public interface IParser {
*/ */
Boolean getStripVersionsFromReferences(); Boolean getStripVersionsFromReferences();
/**
* If set to <code>true</code> (which is the default), the Bundle.entry.fullUrl will override the Bundle.entry.resource's
* resource id if the fullUrl is defined. This behavior happens when parsing the source data into a Bundle object. Set this
* to <code>false</code> if this is not the desired behavior (e.g. the client code wishes to perform additional
* validation checks between the fullUrl and the resource id).
*
* @return Returns the parser instance's configuration setting for overriding resource ids with Bundle.entry.fullUrl when
* parsing the source data into a Bundle object. This method will return <code>null</code> if no value is set, in
* which case the value from the {@link ParserOptions} will be used (default is <code>true</code>)
* @see ParserOptions
*/
Boolean getOverrideResourceIdWithBundleEntryFullUrl();
/** /**
* Is the parser in "summary mode"? See {@link #setSummaryMode(boolean)} for information * Is the parser in "summary mode"? See {@link #setSummaryMode(boolean)} for information
* *
@ -362,6 +375,22 @@ public interface IParser {
*/ */
IParser setStripVersionsFromReferences(Boolean theStripVersionsFromReferences); IParser setStripVersionsFromReferences(Boolean theStripVersionsFromReferences);
/**
* If set to <code>true</code> (which is the default), the Bundle.entry.fullUrl will override the Bundle.entry.resource's
* resource id if the fullUrl is defined. This behavior happens when parsing the source data into a Bundle object. Set this
* to <code>false</code> if this is not the desired behavior (e.g. the client code wishes to perform additional
* validation checks between the fullUrl and the resource id).
*
* @param theOverrideResourceIdWithBundleEntryFullUrl
* Set this to <code>false</code> to prevent the parser from overriding resource ids with the
* Bundle.entry.fullUrl (or <code>null</code> to apply the default setting from the {@link ParserOptions})
*
* @see ParserOptions
*
* @return Returns a reference to <code>this</code> parser so that method calls can be chained together
*/
IParser setOverrideResourceIdWithBundleEntryFullUrl(Boolean theOverrideResourceIdWithBundleEntryFullUrl);
/** /**
* If set to <code>true</code> (default is <code>false</code>) only elements marked by the FHIR specification as * If set to <code>true</code> (default is <code>false</code>) only elements marked by the FHIR specification as
* being "summary elements" will be included. * being "summary elements" will be included.

View File

@ -6,6 +6,7 @@ import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.not; import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertSame; import static org.junit.Assert.assertSame;
@ -36,6 +37,7 @@ import org.hl7.fhir.dstu2016may.model.Enumeration;
import org.hl7.fhir.dstu2016may.model.Enumerations.AdministrativeGender; import org.hl7.fhir.dstu2016may.model.Enumerations.AdministrativeGender;
import org.hl7.fhir.dstu2016may.model.Identifier.IdentifierUse; import org.hl7.fhir.dstu2016may.model.Identifier.IdentifierUse;
import org.hl7.fhir.dstu2016may.model.Observation.ObservationStatus; import org.hl7.fhir.dstu2016may.model.Observation.ObservationStatus;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.utilities.xhtml.XhtmlNode; import org.hl7.fhir.utilities.xhtml.XhtmlNode;
import org.junit.*; import org.junit.*;
import org.mockito.ArgumentCaptor; import org.mockito.ArgumentCaptor;
@ -62,7 +64,46 @@ public class JsonParserDstu2_1Test {
ourCtx.setNarrativeGenerator(null); ourCtx.setNarrativeGenerator(null);
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
Bundle bundle = (Bundle) ourCtx.newJsonParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2_1();
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
Bundle bundle = (Bundle) ourCtx.newJsonParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2_1();
}
}
/** /**
* #480 * #480

View File

@ -8,6 +8,7 @@ import static org.hamcrest.Matchers.startsWith;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertArrayEquals; import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertSame; import static org.junit.Assert.assertSame;
@ -96,6 +97,7 @@ import org.hl7.fhir.dstu2016may.model.StringType;
import org.hl7.fhir.dstu2016may.model.UriType; import org.hl7.fhir.dstu2016may.model.UriType;
import org.hl7.fhir.dstu2016may.model.ValueSet; import org.hl7.fhir.dstu2016may.model.ValueSet;
import org.hl7.fhir.instance.model.api.IBaseResource; import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.After; import org.junit.After;
import org.junit.AfterClass; import org.junit.AfterClass;
import org.junit.BeforeClass; import org.junit.BeforeClass;
@ -129,6 +131,47 @@ public class XmlParserDstu2_1Test {
ourCtx.setNarrativeGenerator(null); ourCtx.setNarrativeGenerator(null);
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
Bundle bundle = (Bundle) ourCtx.newXmlParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = null;
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
Bundle bundle = (Bundle) ourCtx.newXmlParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = null;
}
}
/** /**
* See #414 * See #414
*/ */

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@ -5,6 +5,7 @@ import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.not; import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertSame; import static org.junit.Assert.assertSame;
@ -22,6 +23,7 @@ import java.util.*;
import org.apache.commons.io.IOUtils; import org.apache.commons.io.IOUtils;
import org.hamcrest.Matchers; import org.hamcrest.Matchers;
import org.hl7.fhir.instance.model.api.IBaseResource; import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.AfterClass; import org.junit.AfterClass;
import org.junit.Assert; import org.junit.Assert;
import org.junit.Test; import org.junit.Test;
@ -70,6 +72,47 @@ public class JsonParserDstu2Test {
private static FhirContext ourCtx = FhirContext.forDstu2(); private static FhirContext ourCtx = FhirContext.forDstu2();
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(JsonParserDstu2Test.class); private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(JsonParserDstu2Test.class);
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
ca.uhn.fhir.model.dstu2.resource.Bundle bundle = (ca.uhn.fhir.model.dstu2.resource.Bundle) ourCtx.newJsonParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2();
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
ca.uhn.fhir.model.dstu2.resource.Bundle bundle = (ca.uhn.fhir.model.dstu2.resource.Bundle) ourCtx.newJsonParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2();
}
}
/** /**
* See #544 * See #544
*/ */

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@ -12,6 +12,7 @@ import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertSame; import static org.junit.Assert.assertSame;
import static org.junit.Assert.assertThat; import static org.junit.Assert.assertThat;
import static org.junit.Assert.assertTrue; import static org.junit.Assert.assertTrue;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.fail; import static org.junit.Assert.fail;
import static org.mockito.Matchers.any; import static org.mockito.Matchers.any;
import static org.mockito.Mockito.mock; import static org.mockito.Mockito.mock;
@ -30,6 +31,7 @@ import org.hamcrest.collection.IsEmptyCollection;
import org.hamcrest.core.StringContains; import org.hamcrest.core.StringContains;
import org.hamcrest.text.StringContainsInOrder; import org.hamcrest.text.StringContainsInOrder;
import org.hl7.fhir.instance.model.api.IBaseResource; import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.AfterClass; import org.junit.AfterClass;
import org.junit.Before; import org.junit.Before;
import org.junit.BeforeClass; import org.junit.BeforeClass;
@ -68,6 +70,47 @@ public class XmlParserDstu2Test {
} }
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
ca.uhn.fhir.model.dstu2.resource.Bundle bundle = (ca.uhn.fhir.model.dstu2.resource.Bundle) ourCtx.newXmlParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = null;
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
ca.uhn.fhir.model.dstu2.resource.Bundle bundle = (ca.uhn.fhir.model.dstu2.resource.Bundle) ourCtx.newXmlParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = null;
}
}
/** /**
* See #414 * See #414
*/ */

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@ -7,6 +7,7 @@ import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.not; import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertSame; import static org.junit.Assert.assertSame;
@ -45,6 +46,7 @@ import org.hl7.fhir.dstu3.model.CapabilityStatement.UnknownContentCode;
import org.hl7.fhir.dstu3.model.Enumerations.AdministrativeGender; import org.hl7.fhir.dstu3.model.Enumerations.AdministrativeGender;
import org.hl7.fhir.dstu3.model.Identifier.IdentifierUse; import org.hl7.fhir.dstu3.model.Identifier.IdentifierUse;
import org.hl7.fhir.dstu3.model.Observation.ObservationStatus; import org.hl7.fhir.dstu3.model.Observation.ObservationStatus;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.utilities.xhtml.XhtmlNode; import org.hl7.fhir.utilities.xhtml.XhtmlNode;
import org.junit.After; import org.junit.After;
import org.junit.AfterClass; import org.junit.AfterClass;
@ -80,6 +82,47 @@ public class JsonParserDstu3Test {
ourCtx.setNarrativeGenerator(null); ourCtx.setNarrativeGenerator(null);
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
Bundle bundle = (Bundle) ourCtx.newJsonParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu3();
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
Bundle bundle = (Bundle) ourCtx.newJsonParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu3();
}
}
/** /**
* See #544 * See #544
*/ */

View File

@ -8,6 +8,7 @@ import static org.hamcrest.Matchers.startsWith;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertArrayEquals; import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertSame; import static org.junit.Assert.assertSame;
@ -50,6 +51,7 @@ import org.hl7.fhir.dstu3.model.Identifier.IdentifierUse;
import org.hl7.fhir.dstu3.model.Observation.ObservationRelationshipType; import org.hl7.fhir.dstu3.model.Observation.ObservationRelationshipType;
import org.hl7.fhir.dstu3.model.Observation.ObservationStatus; import org.hl7.fhir.dstu3.model.Observation.ObservationStatus;
import org.hl7.fhir.instance.model.api.IBaseResource; import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.*; import org.junit.*;
import org.mockito.ArgumentCaptor; import org.mockito.ArgumentCaptor;
@ -78,6 +80,47 @@ public class XmlParserDstu3Test {
ourCtx.setNarrativeGenerator(null); ourCtx.setNarrativeGenerator(null);
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
Bundle bundle = (Bundle) ourCtx.newXmlParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = null;
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
Bundle bundle = (Bundle) ourCtx.newXmlParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = null;
}
}
/** /**
* See #551 * See #551
*/ */

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@ -5,6 +5,7 @@ import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertArrayEquals; import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotEquals; import static org.junit.Assert.assertNotEquals;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
@ -56,6 +57,7 @@ import org.hl7.fhir.instance.model.ValueSet;
import org.hl7.fhir.instance.model.ValueSet.ConceptDefinitionComponent; import org.hl7.fhir.instance.model.ValueSet.ConceptDefinitionComponent;
import org.hl7.fhir.instance.model.ValueSet.ValueSetCodeSystemComponent; import org.hl7.fhir.instance.model.ValueSet.ValueSetCodeSystemComponent;
import org.hl7.fhir.instance.model.api.IBaseResource; import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.instance.model.api.INarrative; import org.hl7.fhir.instance.model.api.INarrative;
import org.hl7.fhir.instance.model.api.IPrimitiveType; import org.hl7.fhir.instance.model.api.IPrimitiveType;
import org.hl7.fhir.utilities.xhtml.XhtmlNode; import org.hl7.fhir.utilities.xhtml.XhtmlNode;
@ -89,6 +91,67 @@ public class JsonParserHl7OrgDstu2Test {
TestUtil.clearAllStaticFieldsForUnitTest(); TestUtil.clearAllStaticFieldsForUnitTest();
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlEnabled() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
Bundle bundle = (Bundle) ourCtx.newJsonParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertEquals("http://lalaland.org", o1Id.getBaseUrl());
assertEquals("patient", o1Id.getResourceType());
assertEquals("pat1", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2Hl7Org();
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
Bundle bundle = (Bundle) ourCtx.newJsonParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2Hl7Org();
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
try {
String tmp = "{\"resourceType\":\"Bundle\",\"entry\":[{\"fullUrl\":\"http://lalaland.org/patient/pat1\",\"resource\":{\"resourceType\":\"Patient\",\"id\":\"patxuzos\"}}]}";
Bundle bundle = (Bundle) ourCtx.newJsonParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
} finally {
// ensure we cleanup ourCtx so other tests continue to work
ourCtx = FhirContext.forDstu2Hl7Org();
}
}
@Test @Test
public void testEncodeUndeclaredExtensionWithEnumerationContent() { public void testEncodeUndeclaredExtensionWithEnumerationContent() {
IParser parser = ourCtx.newJsonParser(); IParser parser = ourCtx.newJsonParser();

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@ -5,6 +5,7 @@ import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.stringContainsInOrder; import static org.hamcrest.Matchers.stringContainsInOrder;
import static org.junit.Assert.assertArrayEquals; import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals; import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull; import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertNull; import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertThat; import static org.junit.Assert.assertThat;
@ -60,6 +61,7 @@ import org.hl7.fhir.instance.model.SimpleQuantity;
import org.hl7.fhir.instance.model.Specimen; import org.hl7.fhir.instance.model.Specimen;
import org.hl7.fhir.instance.model.StringType; import org.hl7.fhir.instance.model.StringType;
import org.hl7.fhir.instance.model.api.IBaseResource; import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.instance.model.api.INarrative; import org.hl7.fhir.instance.model.api.INarrative;
import org.hl7.fhir.instance.model.api.IPrimitiveType; import org.hl7.fhir.instance.model.api.IPrimitiveType;
import org.junit.After; import org.junit.After;
@ -98,6 +100,52 @@ public class XmlParserHl7OrgDstu2Test {
return htmlNoNs.replace("<div>", "<div xmlns=\\\"http://www.w3.org/1999/xhtml\\\">"); return htmlNoNs.replace("<div>", "<div xmlns=\\\"http://www.w3.org/1999/xhtml\\\">");
} }
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlEnabled() {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
Bundle bundle = (Bundle) ourCtx.newXmlParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertEquals("http://lalaland.org", o1Id.getBaseUrl());
assertEquals("patient", o1Id.getResourceType());
assertEquals("pat1", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnFhirContext() {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
ourCtx.getParserOptions().setOverrideResourceIdWithBundleEntryFullUrl(false);
Bundle bundle = (Bundle) ourCtx.newXmlParser().parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
}
@Test
public void testOverrideResourceIdWithBundleEntryFullUrlDisabled_ConfiguredOnParser() {
String tmp = "<Bundle xmlns=\"http://hl7.org/fhir\"><entry><fullUrl value=\"http://lalaland.org/patient/pat1\"/><resource><Patient xmlns=\"http://hl7.org/fhir\"><id value=\"patxuzos\"/></Patient></resource></entry></Bundle>";
Bundle bundle = (Bundle) ourCtx.newXmlParser().setOverrideResourceIdWithBundleEntryFullUrl(false).parseResource(tmp);
assertEquals(1, bundle.getEntry().size());
{
Patient o1 = (Patient) bundle.getEntry().get(0).getResource();
IIdType o1Id = o1.getIdElement();
assertFalse(o1Id.hasBaseUrl());
assertEquals("Patient", o1Id.getResourceType());
assertEquals("patxuzos", o1Id.getIdPart());
assertFalse(o1Id.hasVersionIdPart());
}
}
@Test @Test
public void testComposition() { public void testComposition() {