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hapi-fhir
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updating all convertor calls to not failfast

This commit is contained in:
markiantorno 2021-08-20 14:11:20 -04:00
parent 770b773761
commit 3cfc41f840
16 changed files with 73 additions and 57 deletions
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3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/FhirResourceDaoSearchParameterDstu2.java
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@ -26,6 +26,7 @@ import ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoSearchParameterR4;
import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.jpa.searchparam.extractor.ISearchParamExtractor;
import ca.uhn.fhir.model.dstu2.resource.SearchParameter;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_10_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_10_40;
import org.springframework.beans.factory.annotation.Autowired;
@ -70,7 +71,7 @@ public class FhirResourceDaoSearchParameterDstu2 extends BaseHapiFhirResourceDao
String encoded = getContext().newJsonParser().encodeResourceToString(theResource);
org.hl7.fhir.dstu2.model.SearchParameter hl7Org = myDstu2Hl7OrgContext.newJsonParser().parseResource(org.hl7.fhir.dstu2.model.SearchParameter.class, encoded);
org.hl7.fhir.r4.model.SearchParameter convertedSp = (org.hl7.fhir.r4.model.SearchParameter) VersionConvertorFactory_10_40.convertResource(hl7Org);
org.hl7.fhir.r4.model.SearchParameter convertedSp = (org.hl7.fhir.r4.model.SearchParameter) VersionConvertorFactory_10_40.convertResource(hl7Org, new BaseAdvisor_10_40(false));
if (isBlank(convertedSp.getExpression()) && isNotBlank(hl7Org.getXpath())) {
convertedSp.setExpression(hl7Org.getXpath());
}

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoConceptMapDstu3.java
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@ -30,6 +30,7 @@ import ca.uhn.fhir.jpa.term.api.ITermConceptMappingSvc;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.api.server.storage.TransactionDetails;
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.dstu3.model.ConceptMap;
import org.hl7.fhir.exceptions.FHIRException;
@ -61,7 +62,7 @@ public class FhirResourceDaoConceptMapDstu3 extends BaseHapiFhirResourceDao<Conc
if (retVal.getDeleted() == null) {
try {
ConceptMap conceptMap = (ConceptMap) theResource;
org.hl7.fhir.r4.model.ConceptMap converted = (org.hl7.fhir.r4.model.ConceptMap) VersionConvertorFactory_30_40.convertResource(conceptMap);
org.hl7.fhir.r4.model.ConceptMap converted = (org.hl7.fhir.r4.model.ConceptMap) VersionConvertorFactory_30_40.convertResource(conceptMap, new BaseAdvisor_30_40(false));
myTermConceptMappingSvc.storeTermConceptMapAndChildren(retVal, converted);
} catch (FHIRException fe) {
throw new InternalErrorException(fe);

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoSearchParameterDstu3.java
View File

@ -5,6 +5,7 @@ import ca.uhn.fhir.jpa.dao.BaseHapiFhirResourceDao;
import ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoSearchParameterR4;
import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.jpa.searchparam.extractor.ISearchParamExtractor;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.dstu3.model.SearchParameter;
import org.springframework.beans.factory.annotation.Autowired;
@ -64,7 +65,7 @@ public class FhirResourceDaoSearchParameterDstu3 extends BaseHapiFhirResourceDao
super.validateResourceForStorage(theResource, theEntityToSave);
FhirResourceDaoSearchParameterR4.validateSearchParam(
(org.hl7.fhir.r4.model.SearchParameter) VersionConvertorFactory_30_40.convertResource(theResource),
(org.hl7.fhir.r4.model.SearchParameter) VersionConvertorFactory_30_40.convertResource(theResource, new BaseAdvisor_30_40(false)),
getContext(), getConfig(), mySearchParamRegistry, mySearchParamExtractor);
}

9
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoValueSetDstu3.java
View File

@ -30,6 +30,7 @@ import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.api.server.storage.TransactionDetails;
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.dstu3.model.CodeableConcept;
import org.hl7.fhir.dstu3.model.Coding;
@ -53,15 +54,15 @@ public class FhirResourceDaoValueSetDstu3 extends BaseHapiFhirResourceDao<ValueS
@Override
public org.hl7.fhir.dstu3.model.ValueSet expand(org.hl7.fhir.dstu3.model.ValueSet theSource, ValueSetExpansionOptions theOptions) {
org.hl7.fhir.r4.model.ValueSet canonicalInput = (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_30_40.convertResource(theSource);
org.hl7.fhir.r4.model.ValueSet canonicalInput = (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_30_40.convertResource(theSource, new BaseAdvisor_30_40(false));
org.hl7.fhir.r4.model.ValueSet canonicalOutput = myTerminologySvc.expandValueSet(theOptions, canonicalInput);
return (ValueSet) VersionConvertorFactory_30_40.convertResource(canonicalOutput);
return (ValueSet) VersionConvertorFactory_30_40.convertResource(canonicalOutput, new BaseAdvisor_30_40(false));
}
@Override
public org.hl7.fhir.dstu3.model.ValueSet expandByIdentifier(String theUri, ValueSetExpansionOptions theOptions) {
org.hl7.fhir.r4.model.ValueSet canonicalOutput = myTerminologySvc.expandValueSet(theOptions, theUri);
return (ValueSet) VersionConvertorFactory_30_40.convertResource(canonicalOutput);
return (ValueSet) VersionConvertorFactory_30_40.convertResource(canonicalOutput, new BaseAdvisor_30_40(false));
}
@Override
@ -85,7 +86,7 @@ public class FhirResourceDaoValueSetDstu3 extends BaseHapiFhirResourceDao<ValueS
if (retVal.getDeleted() == null) {
try {
ValueSet valueSet = (ValueSet) theResource;
org.hl7.fhir.r4.model.ValueSet converted = (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_30_40.convertResource(valueSet);
org.hl7.fhir.r4.model.ValueSet converted = (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_30_40.convertResource(valueSet, new BaseAdvisor_30_40(false));
myTerminologySvc.storeTermValueSet(retVal, converted);
} catch (FHIRException fe) {
throw new InternalErrorException(fe);

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r5/FhirResourceDaoConceptMapR5.java
View File

@ -29,6 +29,7 @@ import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.jpa.term.api.ITermConceptMappingSvc;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.api.server.storage.TransactionDetails;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.r5.model.ConceptMap;
@ -58,7 +59,7 @@ public class FhirResourceDaoConceptMapR5 extends BaseHapiFhirResourceDao<Concept
if (retVal.getDeleted() == null) {
ConceptMap conceptMap = (ConceptMap) theResource;
myTermConceptMappingSvc.storeTermConceptMapAndChildren(retVal,
(org.hl7.fhir.r4.model.ConceptMap) VersionConvertorFactory_40_50.convertResource(conceptMap));
(org.hl7.fhir.r4.model.ConceptMap) VersionConvertorFactory_40_50.convertResource(conceptMap, new BaseAdvisor_40_50(false)));
} else {
myTermConceptMappingSvc.deleteConceptMapAndChildren(retVal);
}

3
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r5/FhirResourceDaoSearchParameterR5.java
View File

@ -5,6 +5,7 @@ import ca.uhn.fhir.jpa.dao.BaseHapiFhirResourceDao;
import ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoSearchParameterR4;
import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.jpa.searchparam.extractor.ISearchParamExtractor;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.r5.model.SearchParameter;
import org.springframework.beans.factory.annotation.Autowired;
@ -64,7 +65,7 @@ public class FhirResourceDaoSearchParameterR5 extends BaseHapiFhirResourceDao<Se
super.validateResourceForStorage(theResource, theEntityToSave);
FhirResourceDaoSearchParameterR4.validateSearchParam(
(org.hl7.fhir.r4.model.SearchParameter) VersionConvertorFactory_40_50.convertResource(theResource),
(org.hl7.fhir.r4.model.SearchParameter) VersionConvertorFactory_40_50.convertResource(theResource, new BaseAdvisor_40_50(false)),
getContext(), getConfig(), mySearchParamRegistry, mySearchParamExtractor);
}

9
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r5/FhirResourceDaoValueSetR5.java
View File

@ -28,6 +28,7 @@ import ca.uhn.fhir.jpa.model.cross.IBasePersistedResource;
import ca.uhn.fhir.jpa.model.entity.ResourceTable;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.api.server.storage.TransactionDetails;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
@ -52,14 +53,14 @@ public class FhirResourceDaoValueSetR5 extends BaseHapiFhirResourceDao<ValueSet>
@Override
public ValueSet expandByIdentifier(String theUri, ValueSetExpansionOptions theOptions) {
org.hl7.fhir.r4.model.ValueSet canonicalOutput = myTerminologySvc.expandValueSet(theOptions, theUri);
return (ValueSet) VersionConvertorFactory_40_50.convertResource(canonicalOutput);
return (ValueSet) VersionConvertorFactory_40_50.convertResource(canonicalOutput, new BaseAdvisor_40_50(false));
}
@Override
public ValueSet expand(ValueSet theSource, ValueSetExpansionOptions theOptions) {
org.hl7.fhir.r4.model.ValueSet canonicalInput = (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_40_50.convertResource(theSource);
org.hl7.fhir.r4.model.ValueSet canonicalInput = (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_40_50.convertResource(theSource, new BaseAdvisor_40_50(false));
org.hl7.fhir.r4.model.ValueSet canonicalOutput = myTerminologySvc.expandValueSet(theOptions, canonicalInput);
return (ValueSet) VersionConvertorFactory_40_50.convertResource(canonicalOutput);
return (ValueSet) VersionConvertorFactory_40_50.convertResource(canonicalOutput, new BaseAdvisor_40_50(false));
}
@Override
@ -82,7 +83,7 @@ public class FhirResourceDaoValueSetR5 extends BaseHapiFhirResourceDao<ValueSet>
if (getConfig().isPreExpandValueSets() && !retVal.isUnchangedInCurrentOperation()) {
if (retVal.getDeleted() == null) {
ValueSet valueSet = (ValueSet) theResource;
myTerminologySvc.storeTermValueSet(retVal, (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_40_50.convertResource(valueSet));
myTerminologySvc.storeTermValueSet(retVal, (org.hl7.fhir.r4.model.ValueSet) VersionConvertorFactory_40_50.convertResource(valueSet, new BaseAdvisor_40_50(false)));
} else {
myTerminologySvc.deleteValueSetAndChildren(retVal);
}

6
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/TerminologyUploaderProvider.java
View File

@ -40,6 +40,8 @@ import ca.uhn.fhir.util.ValidateUtil;
import com.google.common.base.Charsets;
import com.google.common.collect.ArrayListMultimap;
import com.google.common.collect.Multimap;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.instance.model.api.IBaseParameters;
@ -307,10 +309,10 @@ public class TerminologyUploaderProvider extends BaseJpaProvider {
CodeSystem nextCodeSystem;
switch (getContext().getVersion().getVersion()) {
case DSTU3:
nextCodeSystem = (CodeSystem) VersionConvertorFactory_30_40.convertResource((org.hl7.fhir.dstu3.model.CodeSystem) theCodeSystem);
nextCodeSystem = (CodeSystem) VersionConvertorFactory_30_40.convertResource((org.hl7.fhir.dstu3.model.CodeSystem) theCodeSystem, new BaseAdvisor_30_40(false));
break;
case R5:
nextCodeSystem = (CodeSystem) VersionConvertorFactory_40_50.convertResource((org.hl7.fhir.r5.model.CodeSystem) theCodeSystem);
nextCodeSystem = (CodeSystem) VersionConvertorFactory_40_50.convertResource((org.hl7.fhir.r5.model.CodeSystem) theCodeSystem, new BaseAdvisor_40_50(false));
break;
default:
nextCodeSystem = (CodeSystem) theCodeSystem;

25
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/dstu3/BaseJpaResourceProviderConceptMapDstu3.java
View File

@ -31,6 +31,7 @@ import ca.uhn.fhir.rest.annotation.OperationParam;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.dstu3.model.BooleanType;
import org.hl7.fhir.dstu3.model.CodeType;
@ -100,44 +101,44 @@ public class BaseJpaResourceProviderConceptMapDstu3 extends JpaResourceProviderD
try {
if (haveUrl) {
translationRequest.setUrl((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theUrl));
translationRequest.setUrl((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theUrl, new BaseAdvisor_30_40(false)));
}
if (haveConceptMapVersion) {
translationRequest.setConceptMapVersion((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_30_40.convertType(theConceptMapVersion));
translationRequest.setConceptMapVersion((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_30_40.convertType(theConceptMapVersion, new BaseAdvisor_30_40(false)));
}
// Convert from DSTU3 to R4
if (haveSourceCode) {
translationRequest.getCodeableConcept().addCoding().setCodeElement((org.hl7.fhir.r4.model.CodeType) VersionConvertorFactory_30_40.convertType(theSourceCode));
translationRequest.getCodeableConcept().addCoding().setCodeElement((org.hl7.fhir.r4.model.CodeType) VersionConvertorFactory_30_40.convertType(theSourceCode, new BaseAdvisor_30_40(false)));
if (haveSourceCodeSystem) {
translationRequest.getCodeableConcept().getCodingFirstRep().setSystemElement((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theSourceCodeSystem));
translationRequest.getCodeableConcept().getCodingFirstRep().setSystemElement((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theSourceCodeSystem, new BaseAdvisor_30_40(false)));
}
if (haveSourceCodeSystemVersion) {
translationRequest.getCodeableConcept().getCodingFirstRep().setVersionElement((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_30_40.convertType(theSourceCodeSystemVersion));
translationRequest.getCodeableConcept().getCodingFirstRep().setVersionElement((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_30_40.convertType(theSourceCodeSystemVersion, new BaseAdvisor_30_40(false)));
}
} else if (haveSourceCoding) {
translationRequest.getCodeableConcept().addCoding((org.hl7.fhir.r4.model.Coding) VersionConvertorFactory_30_40.convertType(theSourceCoding));
translationRequest.getCodeableConcept().addCoding((org.hl7.fhir.r4.model.Coding) VersionConvertorFactory_30_40.convertType(theSourceCoding, new BaseAdvisor_30_40(false)));
} else {
translationRequest.setCodeableConcept((org.hl7.fhir.r4.model.CodeableConcept) VersionConvertorFactory_30_40.convertType(theSourceCodeableConcept));
translationRequest.setCodeableConcept((org.hl7.fhir.r4.model.CodeableConcept) VersionConvertorFactory_30_40.convertType(theSourceCodeableConcept, new BaseAdvisor_30_40(false)));
}
if (haveSourceValueSet) {
translationRequest.setSource((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theSourceValueSet));
translationRequest.setSource((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theSourceValueSet, new BaseAdvisor_30_40(false)));
}
if (haveTargetValueSet) {
translationRequest.setTarget((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theTargetValueSet));
translationRequest.setTarget((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theTargetValueSet, new BaseAdvisor_30_40(false)));
}
if (haveTargetCodeSystem) {
translationRequest.setTargetSystem((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theTargetCodeSystem));
translationRequest.setTargetSystem((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_30_40.convertType(theTargetCodeSystem, new BaseAdvisor_30_40(false)));
}
if (haveReverse) {
translationRequest.setReverse((org.hl7.fhir.r4.model.BooleanType) VersionConvertorFactory_30_40.convertType(theReverse));
translationRequest.setReverse((org.hl7.fhir.r4.model.BooleanType) VersionConvertorFactory_30_40.convertType(theReverse, new BaseAdvisor_30_40(false)));
}
if (haveId) {
@ -153,7 +154,7 @@ public class BaseJpaResourceProviderConceptMapDstu3 extends JpaResourceProviderD
TranslateConceptResults result = dao.translate(translationRequest, theRequestDetails);
// Convert from R4 to DSTU3
return (Parameters) VersionConvertorFactory_30_40.convertResource(TermConceptMappingSvcImpl.toParameters(result));
return (Parameters) VersionConvertorFactory_30_40.convertResource(TermConceptMappingSvcImpl.toParameters(result), new BaseAdvisor_30_40(false));
} catch (FHIRException fe) {
throw new InternalErrorException(fe);
} finally {

25
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/provider/r5/BaseJpaResourceProviderConceptMapR5.java
View File

@ -30,6 +30,7 @@ import ca.uhn.fhir.rest.annotation.Operation;
import ca.uhn.fhir.rest.annotation.OperationParam;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.r5.model.BooleanType;
import org.hl7.fhir.r5.model.CodeType;
@ -97,44 +98,44 @@ public class BaseJpaResourceProviderConceptMapR5 extends JpaResourceProviderR5<C
TranslationRequest translationRequest = new TranslationRequest();
if (haveUrl) {
translationRequest.setUrl((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theUrl));
translationRequest.setUrl((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theUrl, new BaseAdvisor_40_50(false)));
}
if (haveConceptMapVersion) {
translationRequest.setConceptMapVersion((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_40_50.convertType(theConceptMapVersion));
translationRequest.setConceptMapVersion((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_40_50.convertType(theConceptMapVersion, new BaseAdvisor_40_50(false)));
}
if (haveSourceCode) {
translationRequest.getCodeableConcept().addCoding().setCodeElement((org.hl7.fhir.r4.model.CodeType) VersionConvertorFactory_40_50.convertType(theSourceCode));
translationRequest.getCodeableConcept().addCoding().setCodeElement((org.hl7.fhir.r4.model.CodeType) VersionConvertorFactory_40_50.convertType(theSourceCode, new BaseAdvisor_40_50(false)));
if (haveSourceCodeSystem) {
translationRequest.getCodeableConcept().getCodingFirstRep().setSystemElement((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theSourceCodeSystem));
translationRequest.getCodeableConcept().getCodingFirstRep().setSystemElement((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theSourceCodeSystem, new BaseAdvisor_40_50(false)));
}
if (haveSourceCodeSystemVersion) {
translationRequest.getCodeableConcept().getCodingFirstRep()
.setVersionElement((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_40_50.convertType(theSourceCodeSystemVersion));
.setVersionElement((org.hl7.fhir.r4.model.StringType) VersionConvertorFactory_40_50.convertType(theSourceCodeSystemVersion, new BaseAdvisor_40_50(false)));
}
} else if (haveSourceCoding) {
translationRequest.getCodeableConcept().addCoding((org.hl7.fhir.r4.model.Coding) VersionConvertorFactory_40_50.convertType(theSourceCoding));
translationRequest.getCodeableConcept().addCoding((org.hl7.fhir.r4.model.Coding) VersionConvertorFactory_40_50.convertType(theSourceCoding, new BaseAdvisor_40_50(false)));
} else {
translationRequest.setCodeableConcept((org.hl7.fhir.r4.model.CodeableConcept) VersionConvertorFactory_40_50.convertType(theSourceCodeableConcept));
translationRequest.setCodeableConcept((org.hl7.fhir.r4.model.CodeableConcept) VersionConvertorFactory_40_50.convertType(theSourceCodeableConcept, new BaseAdvisor_40_50(false)));
}
if (haveSourceValueSet) {
translationRequest.setSource((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theSourceValueSet));
translationRequest.setSource((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theSourceValueSet, new BaseAdvisor_40_50(false)));
}
if (haveTargetValueSet) {
translationRequest.setTarget((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theTargetValueSet));
translationRequest.setTarget((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theTargetValueSet, new BaseAdvisor_40_50(false)));
}
if (haveTargetCodeSystem) {
translationRequest.setTargetSystem((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theTargetCodeSystem));
translationRequest.setTargetSystem((org.hl7.fhir.r4.model.UriType) VersionConvertorFactory_40_50.convertType(theTargetCodeSystem, new BaseAdvisor_40_50(false)));
}
if (haveReverse) {
translationRequest.setReverse((org.hl7.fhir.r4.model.BooleanType) VersionConvertorFactory_40_50.convertType(theReverse));
translationRequest.setReverse((org.hl7.fhir.r4.model.BooleanType) VersionConvertorFactory_40_50.convertType(theReverse, new BaseAdvisor_40_50(false)));
}
if (haveId) {
@ -146,7 +147,7 @@ public class BaseJpaResourceProviderConceptMapR5 extends JpaResourceProviderR5<C
IFhirResourceDaoConceptMap<ConceptMap> dao = (IFhirResourceDaoConceptMap<ConceptMap>) getDao();
TranslateConceptResults result = dao.translate(translationRequest, theRequestDetails);
org.hl7.fhir.r4.model.Parameters parameters = TermConceptMappingSvcImpl.toParameters(result);
return (Parameters) VersionConvertorFactory_40_50.convertResource(parameters);
return (Parameters) VersionConvertorFactory_40_50.convertResource(parameters, new BaseAdvisor_40_50(false));
} finally {
endRequest(theServletRequest);
}

7
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermVersionAdapterSvcDstu3.java
View File

@ -25,6 +25,7 @@ import ca.uhn.fhir.jpa.term.api.ITermVersionAdapterSvc;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
import ca.uhn.fhir.util.UrlUtil;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.dstu3.model.CodeSystem;
import org.hl7.fhir.dstu3.model.ConceptMap;
@ -72,7 +73,7 @@ public class TermVersionAdapterSvcDstu3 extends BaseTermVersionAdapterSvcImpl im
public IIdType createOrUpdateCodeSystem(org.hl7.fhir.r4.model.CodeSystem theCodeSystemResource, RequestDetails theRequestDetails) {
CodeSystem resourceToStore;
try {
resourceToStore = (CodeSystem) VersionConvertorFactory_30_40.convertResource(theCodeSystemResource);
resourceToStore = (CodeSystem) VersionConvertorFactory_30_40.convertResource(theCodeSystemResource, new BaseAdvisor_30_40(false));
} catch (FHIRException e) {
throw new InternalErrorException(e);
}
@ -89,7 +90,7 @@ public class TermVersionAdapterSvcDstu3 extends BaseTermVersionAdapterSvcImpl im
public void createOrUpdateConceptMap(org.hl7.fhir.r4.model.ConceptMap theConceptMap) {
ConceptMap resourceToStore;
try {
resourceToStore = (ConceptMap) VersionConvertorFactory_30_40.convertResource(theConceptMap);
resourceToStore = (ConceptMap) VersionConvertorFactory_30_40.convertResource(theConceptMap, new BaseAdvisor_30_40(false));
} catch (FHIRException e) {
throw new InternalErrorException(e);
}
@ -105,7 +106,7 @@ public class TermVersionAdapterSvcDstu3 extends BaseTermVersionAdapterSvcImpl im
public void createOrUpdateValueSet(org.hl7.fhir.r4.model.ValueSet theValueSet) {
ValueSet valueSetDstu3;
try {
valueSetDstu3 = (ValueSet) VersionConvertorFactory_30_40.convertResource(theValueSet);
valueSetDstu3 = (ValueSet) VersionConvertorFactory_30_40.convertResource(theValueSet, new BaseAdvisor_30_40(false));
} catch (FHIRException e) {
throw new InternalErrorException(e);
}

7
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/term/TermVersionAdapterSvcR5.java
View File

@ -24,6 +24,7 @@ import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
import ca.uhn.fhir.jpa.term.api.ITermVersionAdapterSvc;
import ca.uhn.fhir.rest.api.server.RequestDetails;
import ca.uhn.fhir.util.UrlUtil;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.r5.model.CodeSystem;
@ -64,7 +65,7 @@ public class TermVersionAdapterSvcR5 extends BaseTermVersionAdapterSvcImpl imple
public IIdType createOrUpdateCodeSystem(org.hl7.fhir.r4.model.CodeSystem theCodeSystemResource, RequestDetails theRequestDetails) {
validateCodeSystemForStorage(theCodeSystemResource);
CodeSystem codeSystemR4 = (CodeSystem) VersionConvertorFactory_40_50.convertResource(theCodeSystemResource);
CodeSystem codeSystemR4 = (CodeSystem) VersionConvertorFactory_40_50.convertResource(theCodeSystemResource, new BaseAdvisor_40_50(false));
if (isBlank(theCodeSystemResource.getIdElement().getIdPart())) {
String matchUrl = "CodeSystem?url=" + UrlUtil.escapeUrlParam(theCodeSystemResource.getUrl());
return myCodeSystemResourceDao.update(codeSystemR4, matchUrl, theRequestDetails).getId();
@ -76,7 +77,7 @@ public class TermVersionAdapterSvcR5 extends BaseTermVersionAdapterSvcImpl imple
@Override
public void createOrUpdateConceptMap(org.hl7.fhir.r4.model.ConceptMap theConceptMap) {
ConceptMap conceptMapR4 = (ConceptMap) VersionConvertorFactory_40_50.convertResource(theConceptMap);
ConceptMap conceptMapR4 = (ConceptMap) VersionConvertorFactory_40_50.convertResource(theConceptMap, new BaseAdvisor_40_50(false));
if (isBlank(theConceptMap.getIdElement().getIdPart())) {
String matchUrl = "ConceptMap?url=" + UrlUtil.escapeUrlParam(theConceptMap.getUrl());
@ -89,7 +90,7 @@ public class TermVersionAdapterSvcR5 extends BaseTermVersionAdapterSvcImpl imple
@Override
public void createOrUpdateValueSet(org.hl7.fhir.r4.model.ValueSet theValueSet) {
ValueSet valueSetR4 = (ValueSet) VersionConvertorFactory_40_50.convertResource(theValueSet);
ValueSet valueSetR4 = (ValueSet) VersionConvertorFactory_40_50.convertResource(theValueSet, new BaseAdvisor_40_50(false));
if (isBlank(theValueSet.getIdElement().getIdPart())) {
String matchUrl = "ValueSet?url=" + UrlUtil.escapeUrlParam(theValueSet.getUrl());

3
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu3/BaseJpaDstu3Test.java
View File

@ -57,6 +57,7 @@ import ca.uhn.fhir.util.UrlUtil;
import org.apache.commons.io.IOUtils;
import org.hibernate.search.mapper.orm.Search;
import org.hibernate.search.mapper.orm.session.SearchSession;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.dstu3.model.AllergyIntolerance;
import org.hl7.fhir.dstu3.model.Appointment;
@ -462,7 +463,7 @@ public abstract class BaseJpaDstu3Test extends BaseJpaTest {
*/
public static ConceptMap createConceptMap() {
try {
return (ConceptMap) VersionConvertorFactory_30_40.convertResource(BaseJpaR4Test.createConceptMap());
return (ConceptMap) VersionConvertorFactory_30_40.convertResource(BaseJpaR4Test.createConceptMap(), new BaseAdvisor_30_40(false));
} catch (FHIRException fe) {
throw new InternalErrorException(fe);
}

3
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/CommonCodeSystemsTerminologyService.java
View File

@ -16,6 +16,7 @@ import org.fhir.ucum.UcumEssenceService;
import org.fhir.ucum.UcumException;
import org.hl7.fhir.common.hapi.validation.validator.VersionSpecificWorkerContextWrapper;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_40;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_30_40;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
import org.hl7.fhir.dstu2.model.ValueSet;
@ -388,7 +389,7 @@ public class CommonCodeSystemsTerminologyService implements IValidationSupport {
normalized = retVal;
break;
case R5:
normalized = VersionConvertorFactory_40_50.convertResource(retVal);
normalized = VersionConvertorFactory_40_50.convertResource(retVal, new BaseAdvisor_40_50(false));
break;
}

19
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/support/InMemoryTerminologyServerValidationSupport.java
View File

@ -9,6 +9,7 @@ import ca.uhn.fhir.context.support.ValueSetExpansionOptions;
import ca.uhn.fhir.parser.IParser;
import ca.uhn.fhir.util.FhirVersionIndependentConcept;
import org.apache.commons.lang3.Validate;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_10_50;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_30_50;
import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
import org.hl7.fhir.convertors.factory.VersionConvertorFactory_10_50;
@ -67,15 +68,15 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
IBaseResource expansion;
switch (myCtx.getVersion().getVersion()) {
case DSTU2_HL7ORG: {
expansion = VersionConvertorFactory_10_50.convertResource(expansionR5);
expansion = VersionConvertorFactory_10_50.convertResource(expansionR5, new BaseAdvisor_10_50(false));
break;
}
case DSTU3: {
expansion = VersionConvertorFactory_30_50.convertResource(expansionR5);
expansion = VersionConvertorFactory_30_50.convertResource(expansionR5, new BaseAdvisor_30_50(false));
break;
}
case R4: {
expansion = VersionConvertorFactory_40_50.convertResource(expansionR5);
expansion = VersionConvertorFactory_40_50.convertResource(expansionR5, new BaseAdvisor_40_50(false));
break;
}
case R5: {
@ -358,10 +359,10 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
};
Function<String, org.hl7.fhir.r5.model.ValueSet> valueSetLoader = t -> {
org.hl7.fhir.dstu2.model.ValueSet valueSet = (org.hl7.fhir.dstu2.model.ValueSet) theValidationSupportContext.getRootValidationSupport().fetchValueSet(t);
return (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(valueSet);
return (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(valueSet, new BaseAdvisor_10_50(false));
};
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(theInput);
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(theInput, new BaseAdvisor_10_50(false));
org.hl7.fhir.r5.model.ValueSet output = expandValueSetR5(theValidationSupportContext, input, codeSystemLoader, valueSetLoader, theWantSystemUrlAndVersion, theWantCode);
return (output);
}
@ -384,11 +385,11 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
Function<String, org.hl7.fhir.r5.model.ValueSet> valueSetLoader = t -> {
ca.uhn.fhir.model.dstu2.resource.ValueSet valueSet = (ca.uhn.fhir.model.dstu2.resource.ValueSet) theValidationSupportContext.getRootValidationSupport().fetchValueSet(t);
org.hl7.fhir.dstu2.model.ValueSet valueSetRi = parserRi.parseResource(org.hl7.fhir.dstu2.model.ValueSet.class, parserHapi.encodeResourceToString(valueSet));
return (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(valueSetRi);
return (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(valueSetRi, new BaseAdvisor_10_50(false));
};
org.hl7.fhir.dstu2.model.ValueSet valueSetRi = parserRi.parseResource(org.hl7.fhir.dstu2.model.ValueSet.class, parserHapi.encodeResourceToString(theInput));
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(valueSetRi);
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_10_50.convertResource(valueSetRi, new BaseAdvisor_10_50(false));
org.hl7.fhir.r5.model.ValueSet output = expandValueSetR5(theValidationSupportContext, input, codeSystemLoader, valueSetLoader, theWantSystemUrlAndVersion, theWantCode);
return (output);
}
@ -448,7 +449,7 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
return (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_30_50.convertResource(valueSet, new BaseAdvisor_30_50(false));
};
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_30_50.convertResource(theInput);
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_30_50.convertResource(theInput, new BaseAdvisor_30_50(false));
org.hl7.fhir.r5.model.ValueSet output = expandValueSetR5(theValidationSupportContext, input, codeSystemLoader, valueSetLoader, theWantSystemUrlAndVersion, theWantCode);
return (output);
}
@ -464,7 +465,7 @@ public class InMemoryTerminologyServerValidationSupport implements IValidationSu
return (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_40_50.convertResource(valueSet, new BaseAdvisor_40_50(false));
};
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_40_50.convertResource(theInput);
org.hl7.fhir.r5.model.ValueSet input = (org.hl7.fhir.r5.model.ValueSet) VersionConvertorFactory_40_50.convertResource(theInput, new BaseAdvisor_40_50(false));
org.hl7.fhir.r5.model.ValueSet output = expandValueSetR5(theValidationSupportContext, input, codeSystemLoader, valueSetLoader, theWantSystemUrlAndVersion, theWantCode);
return (output);
}

2
hapi-fhir-validation/src/main/java/org/hl7/fhir/common/hapi/validation/validator/VersionSpecificWorkerContextWrapper.java
View File

@ -707,7 +707,7 @@ public class VersionSpecificWorkerContextWrapper extends I18nBase implements IWo
@Override
public IBaseResource fromCanonical(Resource theCanonical) {
return VersionConvertorFactory_10_50.convertResource(theCanonical);
return VersionConvertorFactory_10_50.convertResource(theCanonical, new BaseAdvisor_10_50(false));
}
};
break;