Fix OSGI tests
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@ -39,6 +39,16 @@ public enum PaxExamOptions {
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.versionAsInProject(),
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"wrap")
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),
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HAPI_FHIR_CLIENT(
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features(
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maven()
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.groupId("ca.uhn.hapi.fhir.karaf")
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.artifactId("hapi-fhir")
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.type("xml")
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.classifier("features")
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.versionAsInProject(),
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"hapi-fhir-client")
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),
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HAPI_FHIR_HL7ORG_DSTU2(
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features(
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maven()
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@ -1,18 +1,12 @@
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package ca.uhn.fhir.tests.integration.karaf.r4;
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package ca.uhn.fhir.tests.integration.karaf.client;
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import java.io.IOException;
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import java.util.List;
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import ca.uhn.fhir.context.FhirContext;
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import org.hl7.fhir.exceptions.FHIRException;
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import org.hl7.fhir.r4.hapi.ctx.DefaultProfileValidationSupport;
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import org.hl7.fhir.r4.hapi.ctx.HapiWorkerContext;
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import org.hl7.fhir.r4.model.Base;
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import org.hl7.fhir.r4.model.BooleanType;
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import org.hl7.fhir.r4.model.Observation;
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import org.hl7.fhir.r4.model.Patient;
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import org.hl7.fhir.r4.model.StringType;
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import org.hl7.fhir.r4.model.StructureDefinition;
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import org.hl7.fhir.r4.utils.FHIRPathEngine;
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import ca.uhn.fhir.rest.api.MethodOutcome;
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import ca.uhn.fhir.rest.api.PreferReturnEnum;
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import ca.uhn.fhir.rest.client.api.IGenericClient;
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import org.hl7.fhir.dstu3.model.Patient;
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import org.junit.Ignore;
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import org.junit.Test;
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import org.junit.runner.RunWith;
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import org.ops4j.pax.exam.Configuration;
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@ -21,12 +15,10 @@ import org.ops4j.pax.exam.junit.PaxExam;
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import org.ops4j.pax.exam.spi.reactors.ExamReactorStrategy;
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import org.ops4j.pax.exam.spi.reactors.PerClass;
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import static ca.uhn.fhir.tests.integration.karaf.PaxExamOptions.HAPI_FHIR_VALIDATION_R4;
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import static ca.uhn.fhir.tests.integration.karaf.PaxExamOptions.HAPI_FHIR_CLIENT;
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import static ca.uhn.fhir.tests.integration.karaf.PaxExamOptions.HAPI_FHIR_DSTU3;
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import static ca.uhn.fhir.tests.integration.karaf.PaxExamOptions.KARAF;
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import static ca.uhn.fhir.tests.integration.karaf.PaxExamOptions.WRAP;
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import static org.junit.Assert.assertEquals;
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import static org.junit.Assert.assertFalse;
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import static org.junit.Assert.assertTrue;
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import static org.ops4j.pax.exam.CoreOptions.mavenBundle;
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import static org.ops4j.pax.exam.CoreOptions.options;
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import static org.ops4j.pax.exam.CoreOptions.when;
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@ -37,17 +29,19 @@ import static org.ops4j.pax.exam.karaf.options.KarafDistributionOption.debugConf
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*/
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@RunWith(PaxExam.class)
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@ExamReactorStrategy(PerClass.class)
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public class FhirInstanceValidatorR4Test {
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@Ignore(value = "Relies on external service being up and running")
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public class FhirClientTest {
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private FhirContext ourCtx = FhirContext.forR4();
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private FHIRPathEngine ourEngine = new FHIRPathEngine(new HapiWorkerContext(ourCtx, new DefaultProfileValidationSupport()));
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private final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirInstanceValidatorR4Test.class);
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private FhirContext fhirContext = FhirContext.forDstu3();
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private IGenericClient client = fhirContext.newRestfulGenericClient("http://fhirtest.uhn.ca/baseDstu3");
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private final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirClientTest.class);
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@Configuration
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public Option[] config() throws IOException {
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return options(
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KARAF.option(),
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HAPI_FHIR_VALIDATION_R4.option(),
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HAPI_FHIR_CLIENT.option(),
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HAPI_FHIR_DSTU3.option(),
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mavenBundle().groupId("org.apache.servicemix.bundles").artifactId("org.apache.servicemix.bundles.hamcrest").versionAsInProject(),
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WRAP.option(),
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when(false)
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@ -57,58 +51,13 @@ public class FhirInstanceValidatorR4Test {
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}
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@Test
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public void testAs() throws Exception {
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Observation obs = new Observation();
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obs.setValue(new StringType("FOO"));
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List<Base> value = ourEngine.evaluate(obs, "Observation.value.as(String)");
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assertEquals(1, value.size());
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assertEquals("FOO", ((StringType)value.get(0)).getValue());
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}
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@Test
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public void testExistsWithNoValue() throws FHIRException {
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public void createPatient() throws Exception {
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Patient patient = new Patient();
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patient.setDeceased(new BooleanType());
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List<Base> eval = ourEngine.evaluate(patient, "Patient.deceased.exists()");
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ourLog.info(eval.toString());
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assertFalse(((BooleanType)eval.get(0)).getValue());
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}
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@Test
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public void testExistsWithValue() throws FHIRException {
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Patient patient = new Patient();
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patient.setDeceased(new BooleanType(false));
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List<Base> eval = ourEngine.evaluate(patient, "Patient.deceased.exists()");
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ourLog.info(eval.toString());
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assertTrue(((BooleanType)eval.get(0)).getValue());
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}
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@Test
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public void testConcatenation() throws FHIRException {
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String exp = "Patient.name.family & '.'";
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Patient p = new Patient();
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p.addName().setFamily("TEST");
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String result = ourEngine.evaluateToString(p, exp);
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assertEquals("TEST.", result);
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}
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@Test
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public void testConcatenationFunction() throws FHIRException {
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String exp = "element.first().path.startsWith(%resource.type) and element.tail().all(path.startsWith(%resource.type&'.'))";
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StructureDefinition sd = new StructureDefinition();
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StructureDefinition.StructureDefinitionDifferentialComponent diff = sd.getDifferential();
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diff.addElement().setPath("Patient.name");
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Patient p = new Patient();
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p.addName().setFamily("TEST");
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List<Base> result = ourEngine.evaluate(null, p, diff, exp);
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ourLog.info(result.toString());
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// assertEquals("TEST.", result);
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patient.setId("PATIENTID");
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patient.getMeta().addProfile("http://BAR");
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patient.addName().addGiven("GIVEN");
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MethodOutcome execute = client.create().resource(patient).prefer(PreferReturnEnum.REPRESENTATION).execute();
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ourLog.info(execute.toString());
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}
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}
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