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hapi-fhir
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Merge branch 'dstu2_custom_structs'

This commit is contained in:
James Agnew 2017-12-12 21:47:05 -05:00
parent 4a0b9b50f9 64e120cef8
commit 3e8fc0c89c
14 changed files with 1369 additions and 159 deletions
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56
hapi-fhir-base/src/main/java/ca/uhn/fhir/util/FhirTerser.java
View File

@ -22,6 +22,7 @@ import static org.apache.commons.lang3.StringUtils.defaultString;
* #L%
*/
import java.util.*;
import java.util.function.Predicate;
import org.apache.commons.lang3.Validate;
import org.hl7.fhir.instance.model.api.*;
@ -212,10 +213,43 @@ public class FhirTerser {
@SuppressWarnings("unchecked")
private <T> List<T> getValues(BaseRuntimeElementCompositeDefinition<?> theCurrentDef, Object theCurrentObj, List<String> theSubList, Class<T> theWantedClass) {
String name = theSubList.get(0);
List<T> retVal = new ArrayList<>();
if (name.startsWith("extension('")) {
String extensionUrl = name.substring("extension('".length());
int endIndex = extensionUrl.indexOf('\'');
if (endIndex != -1) {
extensionUrl = extensionUrl.substring(0, endIndex);
}
List<ExtensionDt> extensions= Collections.emptyList();
if (theCurrentObj instanceof ISupportsUndeclaredExtensions) {
extensions = ((ISupportsUndeclaredExtensions) theCurrentObj).getUndeclaredExtensionsByUrl(extensionUrl);
} else if (theCurrentObj instanceof IBaseExtension) {
extensions = ((IBaseExtension)theCurrentObj).getExtension();
}
for (ExtensionDt next : extensions) {
if (theWantedClass.isAssignableFrom(next.getClass())) {
retVal.add((T) next);
}
}
if (theSubList.size() > 1) {
List<T> values = retVal;
retVal = new ArrayList<>();
for (T nextElement : values) {
BaseRuntimeElementCompositeDefinition<?> nextChildDef = (BaseRuntimeElementCompositeDefinition<?>) myContext.getElementDefinition((Class<? extends IBase>) nextElement.getClass());
List<T> foundValues = getValues(nextChildDef, nextElement, theSubList.subList(1, theSubList.size()), theWantedClass);
retVal.addAll(foundValues);
}
}
return retVal;
}
BaseRuntimeChildDefinition nextDef = theCurrentDef.getChildByNameOrThrowDataFormatException(name);
List<? extends IBase> values = nextDef.getAccessor().getValues(theCurrentObj);
List<T> retVal = new ArrayList<T>();
if (theSubList.size() == 1) {
if (nextDef instanceof RuntimeChildChoiceDefinition) {
@ -268,7 +302,25 @@ public class FhirTerser {
}
private List<String> parsePath(BaseRuntimeElementCompositeDefinition<?> theElementDef, String thePath) {
List<String> parts = Arrays.asList(thePath.split("\\."));
List<String> parts = new ArrayList<>();
int currentStart = 0;
boolean inSingleQuote = false;
for (int i = 0; i < thePath.length(); i++) {
switch (thePath.charAt(i)) {
case '\'':
inSingleQuote = !inSingleQuote;
break;
case '.':
if (!inSingleQuote) {
parts.add(thePath.substring(currentStart, i));
currentStart = i + 1;
}
break;
}
}
parts.add(thePath.substring(currentStart));
if (theElementDef instanceof RuntimeResourceDefinition) {
if (parts.size() > 0 && parts.get(0).equals(theElementDef.getName())) {

26
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/BaseHapiFhirResourceDao.java
View File

@ -56,8 +56,12 @@ import org.hl7.fhir.instance.model.api.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Required;
import org.springframework.transaction.PlatformTransactionManager;
import org.springframework.transaction.TransactionDefinition;
import org.springframework.transaction.TransactionStatus;
import org.springframework.transaction.annotation.Propagation;
import org.springframework.transaction.annotation.Transactional;
import org.springframework.transaction.support.TransactionCallback;
import org.springframework.transaction.support.TransactionTemplate;
import javax.annotation.PostConstruct;
import javax.persistence.NoResultException;
@ -89,6 +93,8 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
private Class<T> myResourceType;
private String mySecondaryPrimaryKeyParamName;
@Autowired
private ISearchParamRegistry mySearchParamRegistry;
@Override
public void addTag(IIdType theId, TagTypeEnum theTagType, String theScheme, String theTerm, String theLabel) {
@ -558,6 +564,26 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
return false;
}
protected void markResourcesMatchingExpressionAsNeedingReindexing(String theExpression) {
if (isNotBlank(theExpression)) {
final String resourceType = theExpression.substring(0, theExpression.indexOf('.'));
ourLog.info("Marking all resources of type {} for reindexing due to updated search parameter with path: {}", resourceType, theExpression);
TransactionTemplate txTemplate = new TransactionTemplate(myPlatformTransactionManager);
txTemplate.setPropagationBehavior(TransactionDefinition.PROPAGATION_REQUIRED);
int updatedCount = txTemplate.execute(new TransactionCallback<Integer>() {
@Override
public Integer doInTransaction(TransactionStatus theStatus) {
return myResourceTableDao.markResourcesOfTypeAsRequiringReindexing(resourceType);
}
});
ourLog.info("Marked {} resources for reindexing", updatedCount);
}
mySearchParamRegistry.forceRefresh();
}
@Override
public <MT extends IBaseMetaType> MT metaAddOperation(IIdType theResourceId, MT theMetaAdd, RequestDetails theRequestDetails) {
// Notify interceptors

14
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/BaseSearchParamExtractor.java
View File

@ -27,6 +27,8 @@ import java.util.List;
import java.util.regex.Pattern;
import org.apache.commons.lang3.ObjectUtils;
import org.hl7.fhir.instance.model.api.IBaseDatatype;
import org.hl7.fhir.instance.model.api.IBaseExtension;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.springframework.beans.factory.annotation.Autowired;
@ -80,7 +82,17 @@ public abstract class BaseSearchParamExtractor implements ISearchParamExtractor
for (String nextPath : nextPathsSplit) {
String nextPathTrimmed = nextPath.trim();
try {
values.addAll(t.getValues(theResource, nextPathTrimmed));
List<Object> allValues = t.getValues(theResource, nextPathTrimmed);
for (Object next : allValues) {
if (next instanceof IBaseExtension) {
IBaseDatatype value = ((IBaseExtension) next).getValue();
if (value != null) {
values.add(value);
}
} else {
values.add(next);
}
}
} catch (Exception e) {
RuntimeResourceDefinition def = myContext.getResourceDefinition(theResource);
ourLog.warn("Failed to index values from path[{}] in resource type[{}]: {}", new Object[] { nextPathTrimmed, def.getName(), e.toString(), e } );

56
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/FhirResourceDaoSearchParameterDstu2.java
View File

@ -20,19 +20,34 @@ package ca.uhn.fhir.jpa.dao;
* #L%
*/
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoSearchParameterR4;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.model.dstu2.composite.MetaDt;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.dstu2.resource.SearchParameter;
import ca.uhn.fhir.model.dstu2.valueset.ResourceTypeEnum;
import ca.uhn.fhir.model.dstu2.valueset.SearchParamTypeEnum;
import ca.uhn.fhir.model.primitive.BoundCodeDt;
import ca.uhn.fhir.model.primitive.CodeDt;
import org.apache.commons.lang3.time.DateUtils;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.scheduling.annotation.Scheduled;
import ca.uhn.fhir.model.dstu2.composite.MetaDt;
import ca.uhn.fhir.model.dstu2.resource.Bundle;
import ca.uhn.fhir.model.dstu2.resource.SearchParameter;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collections;
import java.util.List;
public class FhirResourceDaoSearchParameterDstu2 extends FhirResourceDaoDstu2<SearchParameter> implements IFhirResourceDaoSearchParameter<SearchParameter> {
@Autowired
private IFhirSystemDao<Bundle, MetaDt> mySystemDao;
protected void markAffectedResources(SearchParameter theResource) {
markResourcesMatchingExpressionAsNeedingReindexing(theResource != null ? theResource.getXpath() : null);
}
/**
* This method is called once per minute to perform any required re-indexing. During most passes this will
* just check and find that there are no resources requiring re-indexing. In that case the method just returns
@ -58,4 +73,39 @@ public class FhirResourceDaoSearchParameterDstu2 extends FhirResourceDaoDstu2<Se
}
@Override
protected void postPersist(ResourceTable theEntity, SearchParameter theResource) {
super.postPersist(theEntity, theResource);
markAffectedResources(theResource);
}
@Override
protected void postUpdate(ResourceTable theEntity, SearchParameter theResource) {
super.postUpdate(theEntity, theResource);
markAffectedResources(theResource);
}
@Override
protected void preDelete(SearchParameter theResourceToDelete, ResourceTable theEntityToDelete) {
super.preDelete(theResourceToDelete, theEntityToDelete);
markAffectedResources(theResourceToDelete);
}
@Override
protected void validateResourceForStorage(SearchParameter theResource, ResourceTable theEntityToSave) {
super.validateResourceForStorage(theResource, theEntityToSave);
Enum<?> status = theResource.getStatusElement().getValueAsEnum();
List<BoundCodeDt<ResourceTypeEnum>> base = Collections.emptyList();
if (theResource.getBase() != null) {
base = Arrays.asList(theResource.getBaseElement());
}
String expression = theResource.getXpath();
FhirContext context = getContext();
SearchParamTypeEnum type = theResource.getTypeElement().getValueAsEnum();
FhirResourceDaoSearchParameterR4.validateSearchParam(type, status, base, expression, context);
}
}

9
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/SearchParamExtractorDstu2.java
View File

@ -227,6 +227,15 @@ public class SearchParamExtractorDstu2 extends BaseSearchParamExtractor implemen
ResourceIndexedSearchParamNumber nextEntity = new ResourceIndexedSearchParamNumber(resourceName, new BigDecimal(nextValue.getValue()));
nextEntity.setResource(theEntity);
retVal.add(nextEntity);
} else if (nextObject instanceof DecimalDt) {
DecimalDt nextValue = (DecimalDt) nextObject;
if (nextValue.getValue() == null) {
continue;
}
ResourceIndexedSearchParamNumber nextEntity = new ResourceIndexedSearchParamNumber(resourceName, nextValue.getValue());
nextEntity.setResource(theEntity);
retVal.add(nextEntity);
} else {
if (!multiType) {
throw new ConfigurationException("Search param " + resourceName + " is of unexpected datatype: " + nextObject.getClass());

227
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/SearchParamRegistryDstu2.java
View File

@ -20,9 +20,234 @@ package ca.uhn.fhir.jpa.dao;
* #L%
*/
import ca.uhn.fhir.context.RuntimeSearchParam;
import ca.uhn.fhir.jpa.dao.dstu3.SearchParamRegistryDstu3;
import ca.uhn.fhir.jpa.search.JpaRuntimeSearchParam;
import ca.uhn.fhir.jpa.util.JpaConstants;
import ca.uhn.fhir.jpa.util.StopWatch;
import ca.uhn.fhir.model.api.ExtensionDt;
import ca.uhn.fhir.model.dstu2.resource.SearchParameter;
import ca.uhn.fhir.model.primitive.CodeDt;
import ca.uhn.fhir.rest.api.RestSearchParameterTypeEnum;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
import org.apache.commons.lang3.time.DateUtils;
import org.hl7.fhir.instance.model.api.IBaseResource;
import org.hl7.fhir.instance.model.api.IIdType;
import org.hl7.fhir.instance.model.api.IPrimitiveType;
import org.springframework.beans.factory.annotation.Autowired;
import java.util.*;
import static org.apache.commons.lang3.StringUtils.isBlank;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
public class SearchParamRegistryDstu2 extends BaseSearchParamRegistry {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(SearchParamRegistryDstu3.class);
public static final int MAX_MANAGED_PARAM_COUNT = 10000;
private volatile Map<String, Map<String, RuntimeSearchParam>> myActiveSearchParams;
@Autowired
private DaoConfig myDaoConfig;
private volatile long myLastRefresh;
@Autowired
private IFhirResourceDao<SearchParameter> mySpDao;
@Override
public void forceRefresh() {
synchronized (this) {
myLastRefresh = 0;
}
}
@Override
public Map<String, Map<String, RuntimeSearchParam>> getActiveSearchParams() {
refreshCacheIfNecessary();
return myActiveSearchParams;
}
@Override
public Map<String, RuntimeSearchParam> getActiveSearchParams(String theResourceName) {
refreshCacheIfNecessary();
return myActiveSearchParams.get(theResourceName);
}
private Map<String, RuntimeSearchParam> getSearchParamMap(Map<String, Map<String, RuntimeSearchParam>> searchParams, String theResourceName) {
Map<String, RuntimeSearchParam> retVal = searchParams.get(theResourceName);
if (retVal == null) {
retVal = new HashMap<>();
searchParams.put(theResourceName, retVal);
}
return retVal;
}
protected void refreshCacheIfNecessary() {
// nothing yet
long refreshInterval = 60 * DateUtils.MILLIS_PER_MINUTE;
if (System.currentTimeMillis() - refreshInterval > myLastRefresh) {
synchronized (this) {
if (System.currentTimeMillis() - refreshInterval > myLastRefresh) {
StopWatch sw = new StopWatch();
Map<String, Map<String, RuntimeSearchParam>> searchParams = new HashMap<>();
for (Map.Entry<String, Map<String, RuntimeSearchParam>> nextBuiltInEntry : getBuiltInSearchParams().entrySet()) {
for (RuntimeSearchParam nextParam : nextBuiltInEntry.getValue().values()) {
String nextResourceName = nextBuiltInEntry.getKey();
getSearchParamMap(searchParams, nextResourceName).put(nextParam.getName(), nextParam);
}
}
SearchParameterMap params = new SearchParameterMap();
params.setLoadSynchronousUpTo(MAX_MANAGED_PARAM_COUNT);
IBundleProvider allSearchParamsBp = mySpDao.search(params);
int size = allSearchParamsBp.size();
// Just in case..
if (size > MAX_MANAGED_PARAM_COUNT) {
ourLog.warn("Unable to support >" + MAX_MANAGED_PARAM_COUNT + " search params!");
size = MAX_MANAGED_PARAM_COUNT;
}
List<IBaseResource> allSearchParams = allSearchParamsBp.getResources(0, size);
for (IBaseResource nextResource : allSearchParams) {
SearchParameter nextSp = (SearchParameter) nextResource;
JpaRuntimeSearchParam runtimeSp = toRuntimeSp(nextSp);
if (runtimeSp == null) {
continue;
}
CodeDt nextBaseName = nextSp.getBaseElement();
String resourceType = nextBaseName.getValue();
if (isBlank(resourceType)) {
continue;
}
Map<String, RuntimeSearchParam> searchParamMap = getSearchParamMap(searchParams, resourceType);
String name = runtimeSp.getName();
if (myDaoConfig.isDefaultSearchParamsCanBeOverridden() || !searchParamMap.containsKey(name)) {
searchParamMap.put(name, runtimeSp);
}
}
Map<String, Map<String, RuntimeSearchParam>> activeSearchParams = new HashMap<>();
for (Map.Entry<String, Map<String, RuntimeSearchParam>> nextEntry : searchParams.entrySet()) {
for (RuntimeSearchParam nextSp : nextEntry.getValue().values()) {
String nextName = nextSp.getName();
if (nextSp.getStatus() != RuntimeSearchParam.RuntimeSearchParamStatusEnum.ACTIVE) {
nextSp = null;
}
if (!activeSearchParams.containsKey(nextEntry.getKey())) {
activeSearchParams.put(nextEntry.getKey(), new HashMap<String, RuntimeSearchParam>());
}
if (activeSearchParams.containsKey(nextEntry.getKey())) {
ourLog.debug("Replacing existing/built in search param {}:{} with new one", nextEntry.getKey(), nextName);
}
if (nextSp != null) {
activeSearchParams.get(nextEntry.getKey()).put(nextName, nextSp);
} else {
activeSearchParams.get(nextEntry.getKey()).remove(nextName);
}
}
}
myActiveSearchParams = activeSearchParams;
super.populateActiveSearchParams(activeSearchParams);
myLastRefresh = System.currentTimeMillis();
ourLog.info("Refreshed search parameter cache in {}ms", sw.getMillis());
}
}
}
}
private JpaRuntimeSearchParam toRuntimeSp(SearchParameter theNextSp) {
String name = theNextSp.getCode();
String description = theNextSp.getDescription();
String path = theNextSp.getXpath();
RestSearchParameterTypeEnum paramType = null;
RuntimeSearchParam.RuntimeSearchParamStatusEnum status = null;
switch (theNextSp.getTypeElement().getValueAsEnum()) {
case COMPOSITE:
paramType = RestSearchParameterTypeEnum.COMPOSITE;
break;
case DATE_DATETIME:
paramType = RestSearchParameterTypeEnum.DATE;
break;
case NUMBER:
paramType = RestSearchParameterTypeEnum.NUMBER;
break;
case QUANTITY:
paramType = RestSearchParameterTypeEnum.QUANTITY;
break;
case REFERENCE:
paramType = RestSearchParameterTypeEnum.REFERENCE;
break;
case STRING:
paramType = RestSearchParameterTypeEnum.STRING;
break;
case TOKEN:
paramType = RestSearchParameterTypeEnum.TOKEN;
break;
case URI:
paramType = RestSearchParameterTypeEnum.URI;
break;
}
if (theNextSp.getStatus() != null) {
switch (theNextSp.getStatusElement().getValueAsEnum()) {
case ACTIVE:
status = RuntimeSearchParam.RuntimeSearchParamStatusEnum.ACTIVE;
break;
case DRAFT:
status = RuntimeSearchParam.RuntimeSearchParamStatusEnum.DRAFT;
break;
case RETIRED:
status = RuntimeSearchParam.RuntimeSearchParamStatusEnum.RETIRED;
break;
}
}
Set<String> providesMembershipInCompartments = Collections.emptySet();
Set<String> targets = toStrings(theNextSp.getTarget());
if (isBlank(name) || isBlank(path) || paramType == null) {
if (paramType != RestSearchParameterTypeEnum.COMPOSITE) {
return null;
}
}
IIdType id = theNextSp.getIdElement();
String uri = "";
boolean unique = false;
List<ExtensionDt> uniqueExts = theNextSp.getUndeclaredExtensionsByUrl(JpaConstants.EXT_SP_UNIQUE);
if (uniqueExts.size() > 0) {
IPrimitiveType<?> uniqueExtsValuePrimitive = uniqueExts.get(0).getValueAsPrimitive();
if (uniqueExtsValuePrimitive != null) {
if ("true".equalsIgnoreCase(uniqueExtsValuePrimitive.getValueAsString())) {
unique = true;
}
}
}
List<JpaRuntimeSearchParam.Component> components = Collections.emptyList();
Collection<? extends IPrimitiveType<String>> base = Arrays.asList(theNextSp.getBaseElement());
JpaRuntimeSearchParam retVal = new JpaRuntimeSearchParam(id, uri, name, description, path, paramType, providesMembershipInCompartments, targets, status, unique, components, base);
return retVal;
}
private Set<String> toStrings(List<? extends CodeDt> theTarget) {
HashSet<String> retVal = new HashSet<String>();
for (CodeDt next : theTarget) {
if (isNotBlank(next.getValue())) {
retVal.add(next.getValue());
}
}
return retVal;
}
}

89
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoSearchParameterDstu3.java
View File

@ -1,27 +1,23 @@
package ca.uhn.fhir.jpa.dao.dstu3;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.jpa.dao.BaseSearchParamExtractor;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSearchParameter;
import ca.uhn.fhir.jpa.dao.IFhirSystemDao;
import ca.uhn.fhir.jpa.dao.ISearchParamRegistry;
import ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoSearchParameterR4;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.parser.DataFormatException;
import ca.uhn.fhir.rest.server.exceptions.UnprocessableEntityException;
import ca.uhn.fhir.util.ElementUtil;
import org.apache.commons.lang3.time.DateUtils;
import org.hl7.fhir.dstu3.model.Bundle;
import org.hl7.fhir.dstu3.model.Enumerations;
import org.hl7.fhir.dstu3.model.Meta;
import org.hl7.fhir.dstu3.model.SearchParameter;
import org.hl7.fhir.dstu3.model.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.scheduling.annotation.Scheduled;
import org.springframework.transaction.TransactionDefinition;
import org.springframework.transaction.TransactionStatus;
import org.springframework.transaction.support.TransactionCallback;
import org.springframework.transaction.support.TransactionTemplate;
import java.util.List;
import static org.apache.commons.lang3.StringUtils.isBlank;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
/*
* #%L
@ -54,26 +50,7 @@ public class FhirResourceDaoSearchParameterDstu3 extends FhirResourceDaoDstu3<Se
private IFhirSystemDao<Bundle, Meta> mySystemDao;
protected void markAffectedResources(SearchParameter theResource) {
if (theResource != null) {
String expression = theResource.getExpression();
if (isNotBlank(expression)) {
final String resourceType = expression.substring(0, expression.indexOf('.'));
ourLog.info("Marking all resources of type {} for reindexing due to updated search parameter with path: {}", resourceType, expression);
TransactionTemplate txTemplate = new TransactionTemplate(myPlatformTransactionManager);
txTemplate.setPropagationBehavior(TransactionDefinition.PROPAGATION_REQUIRED);
int updatedCount = txTemplate.execute(new TransactionCallback<Integer>() {
@Override
public Integer doInTransaction(TransactionStatus theStatus) {
return myResourceTableDao.markResourcesOfTypeAsRequiringReindexing(resourceType);
}
});
ourLog.info("Marked {} resources for reindexing", updatedCount);
}
}
mySearchParamRegistry.forceRefresh();
markResourcesMatchingExpressionAsNeedingReindexing(theResource != null ? theResource.getExpression() : null);
}
/**
@ -123,57 +100,13 @@ public class FhirResourceDaoSearchParameterDstu3 extends FhirResourceDaoDstu3<Se
protected void validateResourceForStorage(SearchParameter theResource, ResourceTable theEntityToSave) {
super.validateResourceForStorage(theResource, theEntityToSave);
if (theResource.getStatus() == null) {
throw new UnprocessableEntityException("SearchParameter.status is missing or invalid: " + theResource.getStatusElement().getValueAsString());
}
if (ElementUtil.isEmpty(theResource.getBase())) {
throw new UnprocessableEntityException("SearchParameter.base is missing");
}
Enum<?> status = theResource.getStatus();
List<CodeType> base = theResource.getBase();
String expression = theResource.getExpression();
if (theResource.getType() == Enumerations.SearchParamType.COMPOSITE && isBlank(expression)) {
// this is ok
} else if (isBlank(expression)) {
throw new UnprocessableEntityException("SearchParameter.expression is missing");
} else {
expression = expression.trim();
theResource.setExpression(expression);
String[] expressionSplit = BaseSearchParamExtractor.SPLIT.split(expression);
String allResourceName = null;
for (String nextPath : expressionSplit) {
nextPath = nextPath.trim();
int dotIdx = nextPath.indexOf('.');
if (dotIdx == -1) {
throw new UnprocessableEntityException("Invalid SearchParameter.expression value \"" + nextPath + "\". Must start with a resource name");
}
String resourceName = nextPath.substring(0, dotIdx);
try {
getContext().getResourceDefinition(resourceName);
} catch (DataFormatException e) {
throw new UnprocessableEntityException("Invalid SearchParameter.expression value \"" + nextPath + "\": " + e.getMessage());
}
if (allResourceName == null) {
allResourceName = resourceName;
} else {
if (!allResourceName.equals(resourceName)) {
throw new UnprocessableEntityException("Invalid SearchParameter.expression value \"" + nextPath + "\". All paths in a single SearchParameter must match the same resource type");
}
}
}
} // if have expression
FhirContext context = getContext();
Enumerations.SearchParamType type = theResource.getType();
FhirResourceDaoSearchParameterR4.validateSearchParam(type, status, base, expression, context);
}
}

91
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/r4/FhirResourceDaoSearchParameterR4.java
View File

@ -1,7 +1,22 @@
package ca.uhn.fhir.jpa.dao.r4;
import ca.uhn.fhir.context.FhirContext;
import ca.uhn.fhir.jpa.dao.BaseSearchParamExtractor;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSearchParameter;
import ca.uhn.fhir.jpa.dao.IFhirSystemDao;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.parser.DataFormatException;
import ca.uhn.fhir.rest.server.exceptions.UnprocessableEntityException;
import ca.uhn.fhir.util.ElementUtil;
import org.apache.commons.lang3.time.DateUtils;
import org.hl7.fhir.instance.model.api.IPrimitiveType;
import org.hl7.fhir.r4.model.*;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.scheduling.annotation.Scheduled;
import java.util.List;
import static org.apache.commons.lang3.StringUtils.isBlank;
import static org.apache.commons.lang3.StringUtils.isNotBlank;
/*
* #%L
@ -23,59 +38,16 @@ import static org.apache.commons.lang3.StringUtils.isNotBlank;
* #L%
*/
import org.apache.commons.lang3.time.DateUtils;
import org.hl7.fhir.r4.model.Bundle;
import org.hl7.fhir.r4.model.Enumerations;
import org.hl7.fhir.r4.model.Meta;
import org.hl7.fhir.r4.model.SearchParameter;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.scheduling.annotation.Scheduled;
import org.springframework.transaction.TransactionDefinition;
import org.springframework.transaction.TransactionStatus;
import org.springframework.transaction.annotation.Propagation;
import org.springframework.transaction.support.TransactionCallback;
import org.springframework.transaction.support.TransactionTemplate;
import ca.uhn.fhir.jpa.dao.BaseSearchParamExtractor;
import ca.uhn.fhir.jpa.dao.IFhirResourceDaoSearchParameter;
import ca.uhn.fhir.jpa.dao.IFhirSystemDao;
import ca.uhn.fhir.jpa.dao.ISearchParamRegistry;
import ca.uhn.fhir.jpa.entity.ResourceTable;
import ca.uhn.fhir.parser.DataFormatException;
import ca.uhn.fhir.rest.server.exceptions.UnprocessableEntityException;
import ca.uhn.fhir.util.ElementUtil;
public class FhirResourceDaoSearchParameterR4 extends FhirResourceDaoR4<SearchParameter> implements IFhirResourceDaoSearchParameter<SearchParameter> {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirResourceDaoSearchParameterR4.class);
@Autowired
private ISearchParamRegistry mySearchParamRegistry;
@Autowired
private IFhirSystemDao<Bundle, Meta> mySystemDao;
protected void markAffectedResources(SearchParameter theResource) {
if (theResource != null) {
String expression = theResource.getExpression();
if (isNotBlank(expression)) {
final String resourceType = expression.substring(0, expression.indexOf('.'));
ourLog.info("Marking all resources of type {} for reindexing due to updated search parameter with path: {}", resourceType, expression);
TransactionTemplate txTemplate = new TransactionTemplate(myPlatformTransactionManager);
txTemplate.setPropagationBehavior(TransactionDefinition.PROPAGATION_REQUIRED);
int updatedCount = txTemplate.execute(new TransactionCallback<Integer>() {
@Override
public Integer doInTransaction(TransactionStatus theStatus) {
return myResourceTableDao.markResourcesOfTypeAsRequiringReindexing(resourceType);
}
});
ourLog.info("Marked {} resources for reindexing", updatedCount);
}
}
mySearchParamRegistry.forceRefresh();
markResourcesMatchingExpressionAsNeedingReindexing(theResource != null ? theResource.getExpression() : null);
}
/**
@ -125,29 +97,37 @@ public class FhirResourceDaoSearchParameterR4 extends FhirResourceDaoR4<SearchPa
protected void validateResourceForStorage(SearchParameter theResource, ResourceTable theEntityToSave) {
super.validateResourceForStorage(theResource, theEntityToSave);
if (theResource.getStatus() == null) {
throw new UnprocessableEntityException("SearchParameter.status is missing or invalid: " + theResource.getStatusElement().getValueAsString());
Enum<?> status = theResource.getStatus();
List<CodeType> base = theResource.getBase();
String expression = theResource.getExpression();
FhirContext context = getContext();
Enum<?> type = theResource.getType();
FhirResourceDaoSearchParameterR4.validateSearchParam(type, status, base, expression, context);
}
if (ElementUtil.isEmpty(theResource.getBase())) {
public static void validateSearchParam(Enum<?> theType, Enum<?> theStatus, List<? extends IPrimitiveType> theBase, String theExpression, FhirContext theContext) {
if (theStatus == null) {
throw new UnprocessableEntityException("SearchParameter.status is missing or invalid");
}
if (ElementUtil.isEmpty(theBase)) {
throw new UnprocessableEntityException("SearchParameter.base is missing");
}
String expression = theResource.getExpression();
if (theResource.getType() == Enumerations.SearchParamType.COMPOSITE && isBlank(expression)) {
if (theType != null && theType.name().equals(Enumerations.SearchParamType.COMPOSITE.name()) && isBlank(theExpression)) {
// this is ok
} else if (isBlank(expression)) {
} else if (isBlank(theExpression)) {
throw new UnprocessableEntityException("SearchParameter.expression is missing");
} else {
expression = expression.trim();
theResource.setExpression(expression);
theExpression = theExpression.trim();
String[] expressionSplit = BaseSearchParamExtractor.SPLIT.split(expression);
String[] expressionSplit = BaseSearchParamExtractor.SPLIT.split(theExpression);
String allResourceName = null;
for (String nextPath : expressionSplit) {
nextPath = nextPath.trim();
@ -159,7 +139,7 @@ public class FhirResourceDaoSearchParameterR4 extends FhirResourceDaoR4<SearchPa
String resourceName = nextPath.substring(0, dotIdx);
try {
getContext().getResourceDefinition(resourceName);
theContext.getResourceDefinition(resourceName);
} catch (DataFormatException e) {
throw new UnprocessableEntityException("Invalid SearchParameter.expression value \"" + nextPath + "\": " + e.getMessage());
}
@ -175,7 +155,6 @@ public class FhirResourceDaoSearchParameterR4 extends FhirResourceDaoR4<SearchPa
}
} // if have expression
}
}

15
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/subscription/email/SubscriptionDeliveringEmailSubscriber.java
View File

@ -54,16 +54,13 @@ public class SubscriptionDeliveringEmailSubscriber extends BaseSubscriptionDeliv
List<String> destinationAddresses = new ArrayList<>();
String[] destinationAddressStrings = StringUtils.split(endpointUrl, ",");
for (String next : destinationAddressStrings) {
next = trim(defaultString(next));
if (next.startsWith("mailto:")) {
next = next.substring("mailto:".length());
}
next = processEmailAddressUri(next);
if (isNotBlank(next)) {
destinationAddresses.add(next);
}
}
String from = defaultString(subscription.getEmailDetails().getFrom(), mySubscriptionEmailInterceptor.getDefaultFromAddress());
String from = processEmailAddressUri(defaultString(subscription.getEmailDetails().getFrom(), mySubscriptionEmailInterceptor.getDefaultFromAddress()));
String subjectTemplate = defaultString(subscription.getEmailDetails().getSubjectTemplate(), provideDefaultSubjectTemplate());
EmailDetails details = new EmailDetails();
@ -77,6 +74,14 @@ public class SubscriptionDeliveringEmailSubscriber extends BaseSubscriptionDeliv
emailSender.send(details);
}
private String processEmailAddressUri(String next) {
next = trim(defaultString(next));
if (next.startsWith("mailto:")) {
next = next.substring("mailto:".length());
}
return next;
}
private String provideDefaultSubjectTemplate() {
return "HAPI FHIR Subscriptions";

5
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu2/BaseJpaDstu2Test.java
View File

@ -45,12 +45,17 @@ import static org.mockito.Mockito.mock;
@RunWith(SpringJUnit4ClassRunner.class)
@ContextConfiguration(classes = {TestDstu2Config.class})
public abstract class BaseJpaDstu2Test extends BaseJpaTest {
@Autowired
protected ISearchParamRegistry mySearchParamRegsitry;
@Autowired
protected ApplicationContext myAppCtx;
@Autowired
@Qualifier("myAppointmentDaoDstu2")
protected IFhirResourceDao<Appointment> myAppointmentDao;
@Autowired
@Qualifier("mySearchParameterDaoDstu2")
protected IFhirResourceDao<SearchParameter> mySearchParameterDao;
@Autowired
@Qualifier("myBundleDaoDstu2")
protected IFhirResourceDao<Bundle> myBundleDao;
@Autowired

867
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu2/FhirResourceDaoDstu2SearchCustomSearchParamTest.java Normal file
View File

@ -0,0 +1,867 @@
package ca.uhn.fhir.jpa.dao.dstu2;
import ca.uhn.fhir.jpa.dao.SearchParameterMap;
import ca.uhn.fhir.jpa.dao.dstu3.BaseJpaDstu3Test;
import ca.uhn.fhir.model.api.ExtensionDt;
import ca.uhn.fhir.model.api.Include;
import ca.uhn.fhir.model.dstu2.composite.CodeableConceptDt;
import ca.uhn.fhir.model.dstu2.composite.CodingDt;
import ca.uhn.fhir.model.dstu2.composite.ResourceReferenceDt;
import ca.uhn.fhir.model.dstu2.resource.Appointment;
import ca.uhn.fhir.model.dstu2.resource.Patient;
import ca.uhn.fhir.model.dstu2.resource.Practitioner;
import ca.uhn.fhir.model.dstu2.resource.SearchParameter;
import ca.uhn.fhir.model.dstu2.valueset.*;
import ca.uhn.fhir.model.primitive.*;
import ca.uhn.fhir.rest.api.server.IBundleProvider;
import ca.uhn.fhir.rest.param.*;
import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
import ca.uhn.fhir.rest.server.exceptions.UnprocessableEntityException;
import ca.uhn.fhir.util.TestUtil;
import org.hl7.fhir.instance.model.api.IIdType;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.Test;
import java.util.List;
import static org.hamcrest.Matchers.*;
import static org.junit.Assert.*;
public class FhirResourceDaoDstu2SearchCustomSearchParamTest extends BaseJpaDstu2Test {
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(FhirResourceDaoDstu2SearchCustomSearchParamTest.class);
@Before
public void beforeDisableResultReuse() {
myDaoConfig.setReuseCachedSearchResultsForMillis(null);
}
@Test
public void testCreateInvalidParamInvalidResourceName() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("PatientFoo.gender");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
try {
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("Invalid SearchParameter.expression value \"PatientFoo.gender\": Unknown resource name \"PatientFoo\" (this name is not known in FHIR version \"DSTU2\")", e.getMessage());
}
}
@Test
public void testCreateInvalidNoBase() {
SearchParameter fooSp = new SearchParameter();
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("Patient.gender");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
try {
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("SearchParameter.base is missing", e.getMessage());
}
}
@Test
public void testCreateInvalidParamMismatchedResourceName() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("Patient.gender or Observation.code");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
try {
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("Invalid SearchParameter.expression value \"Observation.code\". All paths in a single SearchParameter must match the same resource type", e.getMessage());
}
}
@Test
public void testCreateInvalidParamNoPath() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
try {
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("SearchParameter.expression is missing", e.getMessage());
}
}
@Test
public void testCreateInvalidParamNoResourceName() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("gender");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
try {
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("Invalid SearchParameter.expression value \"gender\". Must start with a resource name", e.getMessage());
}
}
@Test
public void testCreateInvalidParamParamNullStatus() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("Patient.gender");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus((ConformanceResourceStatusEnum) null);
try {
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("SearchParameter.status is missing or invalid", e.getMessage());
}
}
@Test
public void testExtensionWithNoValueIndexesWithoutFailure() {
SearchParameter eyeColourSp = new SearchParameter();
eyeColourSp.setBase(ResourceTypeEnum.PATIENT);
eyeColourSp.setCode("eyecolour");
eyeColourSp.setType(SearchParamTypeEnum.TOKEN);
eyeColourSp.setXpath("Patient.extension('http://acme.org/eyecolour')");
eyeColourSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
eyeColourSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(eyeColourSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient p1 = new Patient();
p1.setActive(true);
p1.addUndeclaredExtension(false, "http://acme.org/eyecolour").addUndeclaredExtension(false, "http://foo").setValue(new StringDt("VAL"));
IIdType p1id = myPatientDao.create(p1).getId().toUnqualifiedVersionless();
}
@Test
public void testSearchForExtensionToken() {
SearchParameter eyeColourSp = new SearchParameter();
eyeColourSp.setBase(ResourceTypeEnum.PATIENT);
eyeColourSp.setCode("eyecolour");
eyeColourSp.setType(SearchParamTypeEnum.TOKEN);
eyeColourSp.setXpath("Patient.extension('http://acme.org/eyecolour')");
eyeColourSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
eyeColourSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(eyeColourSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient p1 = new Patient();
p1.setActive(true);
p1.addUndeclaredExtension(false, "http://acme.org/eyecolour").setValue(new CodeDt("blue"));
IIdType p1id = myPatientDao.create(p1).getId().toUnqualifiedVersionless();
Patient p2 = new Patient();
p2.setActive(true);
p2.addUndeclaredExtension(false, "http://acme.org/eyecolour").setValue(new CodeDt("green"));
IIdType p2id = myPatientDao.create(p2).getId().toUnqualifiedVersionless();
// Try with custom gender SP
SearchParameterMap map = new SearchParameterMap();
map.add("eyecolour", new TokenParam(null, "blue"));
IBundleProvider results = myPatientDao.search(map);
List<String> foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p1id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepCoding() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.TOKEN);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
siblingSp.addTarget(ResourceTypeEnum.ORGANIZATION);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new CodingDt().setSystem("foo").setCode("bar"));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new TokenParam("foo", "bar"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepCodeableConcept() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.TOKEN);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
siblingSp.addTarget(ResourceTypeEnum.ORGANIZATION);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new CodeableConceptDt().addCoding(new CodingDt().setSystem("foo").setCode("bar")));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new TokenParam("foo", "bar"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepReferenceWrongType() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.REFERENCE);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
siblingSp.addTarget(ResourceTypeEnum.OBSERVATION);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Appointment apt = new Appointment();
apt.setStatus(AppointmentStatusEnum.ARRIVED);
IIdType aptId = myAppointmentDao.create(apt).getId().toUnqualifiedVersionless();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new ResourceReferenceDt(aptId.getValue()));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new ReferenceParam(aptId.getValue()));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, empty());
}
@Test
public void testSearchForExtensionTwoDeepReferenceWithoutType() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.REFERENCE);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Appointment apt = new Appointment();
apt.setStatus(AppointmentStatusEnum.ARRIVED);
IIdType aptId = myAppointmentDao.create(apt).getId().toUnqualifiedVersionless();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new ResourceReferenceDt(aptId.getValue()));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new ReferenceParam(aptId.getValue()));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepReference() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.REFERENCE);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
siblingSp.addTarget(ResourceTypeEnum.APPOINTMENT);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Appointment apt = new Appointment();
apt.setStatus(AppointmentStatusEnum.ARRIVED);
IIdType aptId = myAppointmentDao.create(apt).getId().toUnqualifiedVersionless();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false, "http://acme.org/foo");
extParent
.addUndeclaredExtension(false, "http://acme.org/bar")
.setValue(new ResourceReferenceDt(aptId.getValue()));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new ReferenceParam(aptId.getValue()));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepDate() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.DATE_DATETIME);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Appointment apt = new Appointment();
apt.setStatus(AppointmentStatusEnum.ARRIVED);
IIdType aptId = myAppointmentDao.create(apt).getId().toUnqualifiedVersionless();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new DateDt("2012-01-02"));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new DateParam("2012-01-02"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepNumber() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.NUMBER);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new IntegerDt(5));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new NumberParam("5"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepDecimal() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.NUMBER);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new DecimalDt("2.1"));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new NumberParam("2.1"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionTwoDeepString() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("foobar");
siblingSp.setType(SearchParamTypeEnum.STRING);
siblingSp.setXpath("Patient.extension('http://acme.org/foo').extension('http://acme.org/bar')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient patient = new Patient();
patient.addName().addFamily("P2");
ExtensionDt extParent = patient
.addUndeclaredExtension(false,
"http://acme.org/foo");
extParent
.addUndeclaredExtension(false,
"http://acme.org/bar")
.setValue(new StringDt("HELLOHELLO"));
IIdType p2id = myPatientDao.create(patient).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.add("foobar", new StringParam("hello"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
}
@Test
public void testSearchForExtensionReferenceWithNonMatchingTarget() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("sibling");
siblingSp.setType(SearchParamTypeEnum.REFERENCE);
siblingSp.setXpath("Patient.extension('http://acme.org/sibling')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
siblingSp.addTarget(ResourceTypeEnum.ORGANIZATION);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient p1 = new Patient();
p1.addName().addFamily("P1");
IIdType p1id = myPatientDao.create(p1).getId().toUnqualifiedVersionless();
Patient p2 = new Patient();
p2.addName().addFamily("P2");
p2.addUndeclaredExtension(false, "http://acme.org/sibling").setValue(new ResourceReferenceDt(p1id));
IIdType p2id = myPatientDao.create(p2).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
// Search by ref
map = new SearchParameterMap();
map.add("sibling", new ReferenceParam(p1id.getValue()));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, empty());
// Search by chain
map = new SearchParameterMap();
map.add("sibling", new ReferenceParam("name", "P1"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, empty());
}
@Test
public void testSearchForExtensionReferenceWithoutTarget() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("sibling");
siblingSp.setType(SearchParamTypeEnum.REFERENCE);
siblingSp.setXpath("Patient.extension('http://acme.org/sibling')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient p1 = new Patient();
p1.addName().addFamily("P1");
IIdType p1id = myPatientDao.create(p1).getId().toUnqualifiedVersionless();
Patient p2 = new Patient();
p2.addName().addFamily("P2");
p2.addUndeclaredExtension(false, "http://acme.org/sibling").setValue(new ResourceReferenceDt(p1id));
IIdType p2id = myPatientDao.create(p2).getId().toUnqualifiedVersionless();
Appointment app = new Appointment();
app.addParticipant().getActor().setReference(p2id.getValue());
IIdType appid = myAppointmentDao.create(app).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
// Search by ref
map = new SearchParameterMap();
map.add("sibling", new ReferenceParam(p1id.getValue()));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
// Search by chain
map = new SearchParameterMap();
map.add("sibling", new ReferenceParam("name", "P1"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
// Search by two level chain
map = new SearchParameterMap();
map.add("patient", new ReferenceParam("sibling.name", "P1"));
results = myAppointmentDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, containsInAnyOrder(appid.getValue()));
}
@Test
public void testSearchForExtensionReferenceWithTarget() {
SearchParameter siblingSp = new SearchParameter();
siblingSp.setBase(ResourceTypeEnum.PATIENT);
siblingSp.setCode("sibling");
siblingSp.setType(SearchParamTypeEnum.REFERENCE);
siblingSp.setXpath("Patient.extension('http://acme.org/sibling')");
siblingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
siblingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
siblingSp.addTarget(ResourceTypeEnum.PATIENT);
mySearchParameterDao.create(siblingSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient p1 = new Patient();
p1.addName().addFamily("P1");
IIdType p1id = myPatientDao.create(p1).getId().toUnqualifiedVersionless();
Patient p2 = new Patient();
p2.addName().addFamily("P2");
p2.addUndeclaredExtension(false, "http://acme.org/sibling").setValue(new ResourceReferenceDt(p1id));
IIdType p2id = myPatientDao.create(p2).getId().toUnqualifiedVersionless();
Appointment app = new Appointment();
app.addParticipant().getActor().setReference(p2id.getValue());
IIdType appid = myAppointmentDao.create(app).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
// Search by ref
map = new SearchParameterMap();
map.add("sibling", new ReferenceParam(p1id.getValue()));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
// Search by chain
map = new SearchParameterMap();
map.add("sibling", new ReferenceParam("name", "P1"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(p2id.getValue()));
// Search by two level chain
map = new SearchParameterMap();
map.add("patient", new ReferenceParam("sibling.name", "P1"));
results = myAppointmentDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, containsInAnyOrder(appid.getValue()));
}
@Test
public void testIncludeExtensionReferenceAsRecurse() {
SearchParameter attendingSp = new SearchParameter();
attendingSp.setBase(ResourceTypeEnum.PATIENT);
attendingSp.setCode("attending");
attendingSp.setType(SearchParamTypeEnum.REFERENCE);
attendingSp.setXpath("Patient.extension('http://acme.org/attending')");
attendingSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
attendingSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
attendingSp.addTarget(ResourceTypeEnum.PRACTITIONER);
IIdType spId = mySearchParameterDao.create(attendingSp, mySrd).getId().toUnqualifiedVersionless();
mySearchParamRegsitry.forceRefresh();
Practitioner p1 = new Practitioner();
p1.getName().addFamily("P1");
IIdType p1id = myPractitionerDao.create(p1).getId().toUnqualifiedVersionless();
Patient p2 = new Patient();
p2.addName().addFamily("P2");
p2.addUndeclaredExtension(false, "http://acme.org/attending").setValue(new ResourceReferenceDt(p1id));
IIdType p2id = myPatientDao.create(p2).getId().toUnqualifiedVersionless();
Appointment app = new Appointment();
app.addParticipant().getActor().setReference(p2id.getValue());
IIdType appId = myAppointmentDao.create(app).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
map = new SearchParameterMap();
map.addInclude(new Include("Appointment:patient", true));
map.addInclude(new Include("Patient:attending", true));
results = myAppointmentDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(appId.getValue(), p2id.getValue(), p1id.getValue()));
}
@Test
public void testSearchWithCustomParam() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("Patient.gender");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
IIdType spId = mySearchParameterDao.create(fooSp, mySrd).getId().toUnqualifiedVersionless();
mySearchParamRegsitry.forceRefresh();
Patient pat = new Patient();
pat.setGender(AdministrativeGenderEnum.MALE);
IIdType patId = myPatientDao.create(pat, mySrd).getId().toUnqualifiedVersionless();
Patient pat2 = new Patient();
pat.setGender(AdministrativeGenderEnum.FEMALE);
IIdType patId2 = myPatientDao.create(pat2, mySrd).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
// Try with custom gender SP
map = new SearchParameterMap();
map.add("foo", new TokenParam(null, "male"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(patId.getValue()));
// Try with normal gender SP
map = new SearchParameterMap();
map.add("gender", new TokenParam(null, "male"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(patId.getValue()));
// Delete the param
mySearchParameterDao.delete(spId, mySrd);
mySearchParamRegsitry.forceRefresh();
mySystemDao.performReindexingPass(100);
// Try with custom gender SP
map = new SearchParameterMap();
map.add("foo", new TokenParam(null, "male"));
try {
myPatientDao.search(map).size();
fail();
} catch (InvalidRequestException e) {
assertEquals("Unknown search parameter foo for resource type Patient", e.getMessage());
}
}
@Test
public void testSearchWithCustomParamDraft() {
SearchParameter fooSp = new SearchParameter();
fooSp.setBase(ResourceTypeEnum.PATIENT);
fooSp.setCode("foo");
fooSp.setType(SearchParamTypeEnum.TOKEN);
fooSp.setXpath("Patient.gender");
fooSp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
fooSp.setStatus(ConformanceResourceStatusEnum.DRAFT);
mySearchParameterDao.create(fooSp, mySrd);
mySearchParamRegsitry.forceRefresh();
Patient pat = new Patient();
pat.setGender(AdministrativeGenderEnum.MALE);
IIdType patId = myPatientDao.create(pat, mySrd).getId().toUnqualifiedVersionless();
Patient pat2 = new Patient();
pat.setGender(AdministrativeGenderEnum.FEMALE);
IIdType patId2 = myPatientDao.create(pat2, mySrd).getId().toUnqualifiedVersionless();
SearchParameterMap map;
IBundleProvider results;
List<String> foundResources;
// Try with custom gender SP (should find nothing)
map = new SearchParameterMap();
map.add("foo", new TokenParam(null, "male"));
try {
myPatientDao.search(map).size();
fail();
} catch (InvalidRequestException e) {
assertEquals("Unknown search parameter foo for resource type Patient", e.getMessage());
}
// Try with normal gender SP
map = new SearchParameterMap();
map.add("gender", new TokenParam(null, "male"));
results = myPatientDao.search(map);
foundResources = toUnqualifiedVersionlessIdValues(results);
assertThat(foundResources, contains(patId.getValue()));
}
@Test
public void testCustomReferenceParameter() throws Exception {
SearchParameter sp = new SearchParameter();
sp.setBase(ResourceTypeEnum.PATIENT);
sp.setCode("myDoctor");
sp.setType(SearchParamTypeEnum.REFERENCE);
sp.setXpath("Patient.extension('http://fmcna.com/myDoctor')");
sp.setXpathUsage(XPathUsageTypeEnum.NORMAL);
sp.setStatus(ConformanceResourceStatusEnum.ACTIVE);
mySearchParameterDao.create(sp);
Practitioner pract = new Practitioner();
pract.setId("A");
pract.getName().addFamily("PRACT");
myPractitionerDao.update(pract);
Patient pat = new Patient();
pat.addUndeclaredExtension(false, "http://fmcna.com/myDoctor").setValue(new ResourceReferenceDt("Practitioner/A"));
IIdType pid = myPatientDao.create(pat, mySrd).getId().toUnqualifiedVersionless();
SearchParameterMap params = new SearchParameterMap();
params.add("myDoctor", new ReferenceParam("A"));
IBundleProvider outcome = myPatientDao.search(params);
List<String> ids = toUnqualifiedVersionlessIdValues(outcome);
ourLog.info("IDS: " + ids);
assertThat(ids, contains(pid.getValue()));
}
@AfterClass
public static void afterClassClearContext() {
TestUtil.clearAllStaticFieldsForUnitTest();
}
}

2
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoDstu3SearchCustomSearchParamTest.java
View File

@ -130,7 +130,7 @@ public class FhirResourceDaoDstu3SearchCustomSearchParamTest extends BaseJpaDstu
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("SearchParameter.status is missing or invalid: null", e.getMessage());
assertEquals("SearchParameter.status is missing or invalid", e.getMessage());
}
}

2
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/r4/FhirResourceDaoR4SearchCustomSearchParamTest.java
View File

@ -132,7 +132,7 @@ public class FhirResourceDaoR4SearchCustomSearchParamTest extends BaseJpaR4Test
mySearchParameterDao.create(fooSp, mySrd);
fail();
} catch (UnprocessableEntityException e) {
assertEquals("SearchParameter.status is missing or invalid: null", e.getMessage());
assertEquals("SearchParameter.status is missing or invalid", e.getMessage());
}
}

47
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/subscription/email/EmailSubscriptionDstu3Test.java
View File

@ -176,6 +176,53 @@ public class EmailSubscriptionDstu3Test extends BaseResourceProviderDstu3Test {
String criteria1 = "Observation?code=SNOMED-CT|" + code + "&_format=xml";
Subscription sub1 = createSubscription(criteria1, payload);
Subscription subscriptionTemp = ourClient.read(Subscription.class, sub1.getId());
Assert.assertNotNull(subscriptionTemp);
subscriptionTemp.getChannel().addExtension()
.setUrl(JpaConstants.EXT_SUBSCRIPTION_EMAIL_FROM)
.setValue(new StringType("mailto:myfrom@from.com"));
subscriptionTemp.getChannel().addExtension()
.setUrl(JpaConstants.EXT_SUBSCRIPTION_SUBJECT_TEMPLATE)
.setValue(new StringType("This is a subject"));
subscriptionTemp.setIdElement(subscriptionTemp.getIdElement().toUnqualifiedVersionless());
ourLog.info(myFhirCtx.newJsonParser().setPrettyPrint(true).encodeResourceToString(subscriptionTemp));
ourClient.update().resource(subscriptionTemp).withId(subscriptionTemp.getIdElement()).execute();
waitForQueueToDrain();
sendObservation(code, "SNOMED-CT");
waitForQueueToDrain();
waitForSize(1, 20000, new Callable<Number>() {
@Override
public Number call() throws Exception {
return ourTestSmtp.getReceivedMessages().length;
}
});
List<MimeMessage> received = Arrays.asList(ourTestSmtp.getReceivedMessages());
assertEquals(1, received.size());
assertEquals(1, received.get(0).getFrom().length);
assertEquals("myfrom@from.com", ((InternetAddress)received.get(0).getFrom()[0]).getAddress());
assertEquals(1, received.get(0).getAllRecipients().length);
assertEquals("foo@example.com", ((InternetAddress)received.get(0).getAllRecipients()[0]).getAddress());
assertEquals("text/plain; charset=us-ascii", received.get(0).getContentType());
assertEquals("This is a subject", received.get(0).getSubject().toString().trim());
assertEquals("This is the body", received.get(0).getContent().toString().trim());
assertEquals(mySubscriptionIds.get(0).toUnqualifiedVersionless().getValue(), received.get(0).getHeader("X-FHIR-Subscription")[0]);
}
@Test
public void testEmailSubscriptionWithCustomNoMailtoOnFrom() throws Exception {
String payload = "This is the body";
String code = "1000000050";
String criteria1 = "Observation?code=SNOMED-CT|" + code + "&_format=xml";
Subscription sub1 = createSubscription(criteria1, payload);
Subscription subscriptionTemp = ourClient.read(Subscription.class, sub1.getId());
Assert.assertNotNull(subscriptionTemp);
subscriptionTemp.getChannel().addExtension()