Use correct parameter name for expand operation
This commit is contained in:
James
parent
56a71f9222
commit
4d1ab2734f
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@ -20,35 +20,42 @@ package ca.uhn.fhir.jpa.provider.dstu3;
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* #L%
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*/
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import static org.apache.commons.lang3.StringUtils.isNotBlank;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet.ValidateCodeResult;
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import ca.uhn.fhir.rest.annotation.IdParam;
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import ca.uhn.fhir.rest.annotation.Operation;
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import ca.uhn.fhir.rest.annotation.OperationParam;
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import ca.uhn.fhir.rest.api.server.RequestDetails;
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import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
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import org.hl7.fhir.dstu3.model.*;
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import javax.servlet.http.HttpServletRequest;
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import org.hl7.fhir.dstu3.model.*;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet.ValidateCodeResult;
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import ca.uhn.fhir.rest.annotation.*;
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import ca.uhn.fhir.rest.api.server.RequestDetails;
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import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
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import static org.apache.commons.lang3.StringUtils.isNotBlank;
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public class BaseJpaResourceProviderValueSetDstu3 extends JpaResourceProviderDstu3<ValueSet> {
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//@formatter:off
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@Operation(name = "$expand", idempotent = true)
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public ValueSet expand(
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HttpServletRequest theServletRequest,
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@IdParam(optional=true) IdType theId,
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@OperationParam(name="valueSet", min=0, max=1) ValueSet theValueSet,
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@OperationParam(name="identifier", min=0, max=1) UriType theIdentifier,
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@OperationParam(name = "filter", min=0, max=1) StringType theFilter,
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RequestDetails theRequestDetails) {
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//@formatter:on
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HttpServletRequest theServletRequest,
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@IdParam(optional = true) IdType theId,
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@OperationParam(name = "valueSet", min = 0, max = 1) ValueSet theValueSet,
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// Note: url is correct and identifier is not, but identifier was only added as
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// of 3.1.0 so we'll leave url for now. See: https://groups.google.com/d/msgid/hapi-fhir/CAN2Cfy8kW%2BAOkgC6VjPsU3gRCpExCNZBmJdi-k5R_TWeyWH4tA%40mail.gmail.com?utm_medium=email&utm_source=footer
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@OperationParam(name = "url", min = 0, max = 1) UriType theUrl,
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@OperationParam(name = "identifier", min = 0, max = 1) UriType theIdentifier,
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@OperationParam(name = "filter", min = 0, max = 1) StringType theFilter,
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RequestDetails theRequestDetails) {
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boolean haveId = theId != null && theId.hasIdPart();
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boolean haveIdentifier = theIdentifier != null && isNotBlank(theIdentifier.getValue());
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UriType url = theIdentifier;
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if (theUrl != null && isNotBlank(theUrl.getValue())) {
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url = theUrl;
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}
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boolean haveIdentifier = url != null && isNotBlank(url.getValue());
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boolean haveValueSet = theValueSet != null && theValueSet.isEmpty() == false;
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if (!haveId && !haveIdentifier && !haveValueSet) {
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throw new InvalidRequestException("$expand operation at the type level (no ID specified) requires an identifier or a valueSet as a part of the request");
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}
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@ -56,18 +63,18 @@ public class BaseJpaResourceProviderValueSetDstu3 extends JpaResourceProviderDst
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if (moreThanOneTrue(haveId, haveIdentifier, haveValueSet)) {
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throw new InvalidRequestException("$expand must EITHER be invoked at the instance level, or have an identifier specified, or have a ValueSet specified. Can not combine these options.");
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}
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startRequest(theServletRequest);
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try {
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IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept> dao = (IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept>) getDao();
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if (haveId) {
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return dao.expand(theId, toFilterString(theFilter), theRequestDetails);
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} else if (haveIdentifier) {
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return dao.expandByIdentifier(theIdentifier.getValue(), toFilterString(theFilter));
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return dao.expandByIdentifier(url.getValue(), toFilterString(theFilter));
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} else {
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return dao.expand(theValueSet, toFilterString(theFilter));
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}
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} finally {
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endRequest(theServletRequest);
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}
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@ -79,30 +86,34 @@ public class BaseJpaResourceProviderValueSetDstu3 extends JpaResourceProviderDst
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}
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//@formatter:off
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@SuppressWarnings("unchecked")
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@Operation(name = "$validate-code", idempotent = true, returnParameters= {
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@OperationParam(name="result", type=BooleanType.class, min=1),
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@OperationParam(name="message", type=StringType.class),
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@OperationParam(name="display", type=StringType.class)
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@Operation(name = "$validate-code", idempotent = true, returnParameters = {
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@OperationParam(name = "result", type = BooleanType.class, min = 1),
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@OperationParam(name = "message", type = StringType.class),
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@OperationParam(name = "display", type = StringType.class)
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})
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public Parameters validateCode(
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HttpServletRequest theServletRequest,
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@IdParam(optional=true) IdType theId,
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@OperationParam(name="identifier", min=0, max=1) UriType theValueSetIdentifier,
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@OperationParam(name="code", min=0, max=1) CodeType theCode,
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@OperationParam(name="system", min=0, max=1) UriType theSystem,
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@OperationParam(name="display", min=0, max=1) StringType theDisplay,
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@OperationParam(name="coding", min=0, max=1) Coding theCoding,
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@OperationParam(name="codeableConcept", min=0, max=1) CodeableConcept theCodeableConcept,
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RequestDetails theRequestDetails
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) {
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//@formatter:on
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HttpServletRequest theServletRequest,
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@IdParam(optional = true) IdType theId,
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@OperationParam(name = "identifier", min = 0, max = 1) UriType theValueSetIdentifier,
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@OperationParam(name = "url", min = 0, max = 1) UriType theValueSetUrl,
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@OperationParam(name = "code", min = 0, max = 1) CodeType theCode,
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@OperationParam(name = "system", min = 0, max = 1) UriType theSystem,
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@OperationParam(name = "display", min = 0, max = 1) StringType theDisplay,
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@OperationParam(name = "coding", min = 0, max = 1) Coding theCoding,
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@OperationParam(name = "codeableConcept", min = 0, max = 1) CodeableConcept theCodeableConcept,
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RequestDetails theRequestDetails
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) {
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UriType url = theValueSetIdentifier;
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if (theValueSetUrl != null && isNotBlank(theValueSetUrl.getValue())) {
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url = theValueSetUrl;
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}
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startRequest(theServletRequest);
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try {
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IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept> dao = (IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept>) getDao();
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ValidateCodeResult result = dao.validateCode(theValueSetIdentifier, theId, theCode, theSystem, theDisplay, theCoding, theCodeableConcept, theRequestDetails);
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ValidateCodeResult result = dao.validateCode(url, theId, theCode, theSystem, theDisplay, theCoding, theCodeableConcept, theRequestDetails);
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Parameters retVal = new Parameters();
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retVal.addParameter().setName("result").setValue(new BooleanType(result.isResult()));
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if (isNotBlank(result.getMessage())) {
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@ -117,8 +128,7 @@ public class BaseJpaResourceProviderValueSetDstu3 extends JpaResourceProviderDst
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}
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}
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private static boolean moreThanOneTrue(boolean... theBooleans) {
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boolean haveOne = false;
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for (boolean next : theBooleans) {
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@ -133,5 +143,5 @@ public class BaseJpaResourceProviderValueSetDstu3 extends JpaResourceProviderDst
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return false;
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}
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}
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@ -20,54 +20,53 @@ package ca.uhn.fhir.jpa.provider.r4;
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* #L%
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*/
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import static org.apache.commons.lang3.StringUtils.isNotBlank;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet.ValidateCodeResult;
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import ca.uhn.fhir.rest.annotation.IdParam;
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import ca.uhn.fhir.rest.annotation.Operation;
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import ca.uhn.fhir.rest.annotation.OperationParam;
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import ca.uhn.fhir.rest.api.server.RequestDetails;
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import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
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import org.hl7.fhir.r4.model.*;
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import javax.servlet.http.HttpServletRequest;
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import org.hl7.fhir.r4.model.*;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDaoValueSet.ValidateCodeResult;
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import ca.uhn.fhir.rest.annotation.*;
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import ca.uhn.fhir.rest.api.server.RequestDetails;
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import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
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import static org.apache.commons.lang3.StringUtils.isNotBlank;
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public class BaseJpaResourceProviderValueSetR4 extends JpaResourceProviderR4<ValueSet> {
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//@formatter:off
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@Operation(name = "$expand", idempotent = true)
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public ValueSet expand(
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HttpServletRequest theServletRequest,
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@IdParam(optional=true) IdType theId,
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@OperationParam(name="valueSet", min=0, max=1) ValueSet theValueSet,
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@OperationParam(name="identifier", min=0, max=1) UriType theIdentifier,
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@OperationParam(name = "filter", min=0, max=1) StringType theFilter,
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RequestDetails theRequestDetails) {
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//@formatter:on
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HttpServletRequest theServletRequest,
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@IdParam(optional = true) IdType theId,
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@OperationParam(name = "valueSet", min = 0, max = 1) ValueSet theValueSet,
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@OperationParam(name = "url", min = 0, max = 1) UriType theUrl,
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@OperationParam(name = "filter", min = 0, max = 1) StringType theFilter,
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RequestDetails theRequestDetails) {
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boolean haveId = theId != null && theId.hasIdPart();
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boolean haveIdentifier = theIdentifier != null && isNotBlank(theIdentifier.getValue());
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boolean haveIdentifier = theUrl != null && isNotBlank(theUrl.getValue());
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boolean haveValueSet = theValueSet != null && theValueSet.isEmpty() == false;
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if (!haveId && !haveIdentifier && !haveValueSet) {
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throw new InvalidRequestException("$expand operation at the type level (no ID specified) requires an identifier or a valueSet as a part of the request");
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throw new InvalidRequestException("$expand operation at the type level (no ID specified) requires a url or a valueSet as a part of the request");
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}
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if (moreThanOneTrue(haveId, haveIdentifier, haveValueSet)) {
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throw new InvalidRequestException("$expand must EITHER be invoked at the instance level, or have an identifier specified, or have a ValueSet specified. Can not combine these options.");
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throw new InvalidRequestException("$expand must EITHER be invoked at the instance level, or have a url specified, or have a ValueSet specified. Can not combine these options.");
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}
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startRequest(theServletRequest);
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try {
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IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept> dao = (IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept>) getDao();
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if (haveId) {
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return dao.expand(theId, toFilterString(theFilter), theRequestDetails);
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} else if (haveIdentifier) {
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return dao.expandByIdentifier(theIdentifier.getValue(), toFilterString(theFilter));
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return dao.expandByIdentifier(theUrl.getValue(), toFilterString(theFilter));
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} else {
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return dao.expand(theValueSet, toFilterString(theFilter));
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}
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} finally {
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endRequest(theServletRequest);
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}
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@ -79,30 +78,28 @@ public class BaseJpaResourceProviderValueSetR4 extends JpaResourceProviderR4<Val
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}
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//@formatter:off
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@SuppressWarnings("unchecked")
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@Operation(name = "$validate-code", idempotent = true, returnParameters= {
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@OperationParam(name="result", type=BooleanType.class, min=1),
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@OperationParam(name="message", type=StringType.class),
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@OperationParam(name="display", type=StringType.class)
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@Operation(name = "$validate-code", idempotent = true, returnParameters = {
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@OperationParam(name = "result", type = BooleanType.class, min = 1),
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@OperationParam(name = "message", type = StringType.class),
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@OperationParam(name = "display", type = StringType.class)
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})
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public Parameters validateCode(
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HttpServletRequest theServletRequest,
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@IdParam(optional=true) IdType theId,
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@OperationParam(name="identifier", min=0, max=1) UriType theValueSetIdentifier,
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@OperationParam(name="code", min=0, max=1) CodeType theCode,
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@OperationParam(name="system", min=0, max=1) UriType theSystem,
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@OperationParam(name="display", min=0, max=1) StringType theDisplay,
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@OperationParam(name="coding", min=0, max=1) Coding theCoding,
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@OperationParam(name="codeableConcept", min=0, max=1) CodeableConcept theCodeableConcept,
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RequestDetails theRequestDetails
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) {
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//@formatter:on
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HttpServletRequest theServletRequest,
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@IdParam(optional = true) IdType theId,
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@OperationParam(name = "url", min = 0, max = 1) UriType theValueSetUrl,
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@OperationParam(name = "code", min = 0, max = 1) CodeType theCode,
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@OperationParam(name = "system", min = 0, max = 1) UriType theSystem,
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@OperationParam(name = "display", min = 0, max = 1) StringType theDisplay,
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@OperationParam(name = "coding", min = 0, max = 1) Coding theCoding,
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@OperationParam(name = "codeableConcept", min = 0, max = 1) CodeableConcept theCodeableConcept,
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RequestDetails theRequestDetails
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) {
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startRequest(theServletRequest);
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try {
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IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept> dao = (IFhirResourceDaoValueSet<ValueSet, Coding, CodeableConcept>) getDao();
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ValidateCodeResult result = dao.validateCode(theValueSetIdentifier, theId, theCode, theSystem, theDisplay, theCoding, theCodeableConcept, theRequestDetails);
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ValidateCodeResult result = dao.validateCode(theValueSetUrl, theId, theCode, theSystem, theDisplay, theCoding, theCodeableConcept, theRequestDetails);
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Parameters retVal = new Parameters();
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retVal.addParameter().setName("result").setValue(new BooleanType(result.isResult()));
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if (isNotBlank(result.getMessage())) {
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@ -117,8 +114,7 @@ public class BaseJpaResourceProviderValueSetR4 extends JpaResourceProviderR4<Val
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}
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}
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private static boolean moreThanOneTrue(boolean... theBooleans) {
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boolean haveOne = false;
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for (boolean next : theBooleans) {
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@ -133,5 +129,5 @@ public class BaseJpaResourceProviderValueSetR4 extends JpaResourceProviderR4<Val
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return false;
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}
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}
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@ -1,13 +1,15 @@
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package ca.uhn.fhir.jpa.provider.dstu3;
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import static ca.uhn.fhir.jpa.dao.dstu3.FhirResourceDaoDstu3TerminologyTest.URL_MY_CODE_SYSTEM;
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import static ca.uhn.fhir.jpa.dao.dstu3.FhirResourceDaoDstu3TerminologyTest.URL_MY_VALUE_SET;
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import static org.hamcrest.Matchers.*;
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import static org.junit.Assert.*;
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import java.io.IOException;
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import java.nio.charset.StandardCharsets;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
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import ca.uhn.fhir.jpa.dao.data.IResourceTableDao;
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import ca.uhn.fhir.jpa.entity.ResourceTable;
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import ca.uhn.fhir.jpa.entity.TermCodeSystemVersion;
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import ca.uhn.fhir.jpa.entity.TermConcept;
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import ca.uhn.fhir.jpa.entity.TermConceptParentChildLink.RelationshipTypeEnum;
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import ca.uhn.fhir.jpa.term.IHapiTerminologySvc;
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import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
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import ca.uhn.fhir.rest.server.servlet.ServletRequestDetails;
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import ca.uhn.fhir.util.TestUtil;
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import org.apache.commons.io.IOUtils;
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import org.apache.http.client.methods.CloseableHttpResponse;
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import org.apache.http.client.methods.HttpPost;
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@ -19,17 +21,18 @@ import org.hl7.fhir.dstu3.model.CodeSystem.ConceptDefinitionComponent;
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import org.hl7.fhir.dstu3.model.ValueSet.ConceptSetComponent;
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import org.hl7.fhir.dstu3.model.ValueSet.FilterOperator;
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import org.hl7.fhir.instance.model.api.IIdType;
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import org.junit.*;
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import org.junit.AfterClass;
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import org.junit.Before;
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import org.junit.Test;
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import org.springframework.transaction.annotation.Transactional;
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import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
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import ca.uhn.fhir.jpa.dao.data.IResourceTableDao;
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import ca.uhn.fhir.jpa.entity.*;
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import ca.uhn.fhir.jpa.entity.TermConceptParentChildLink.RelationshipTypeEnum;
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import ca.uhn.fhir.jpa.term.IHapiTerminologySvc;
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import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
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import ca.uhn.fhir.rest.server.servlet.ServletRequestDetails;
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import ca.uhn.fhir.util.TestUtil;
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import java.io.IOException;
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import java.nio.charset.StandardCharsets;
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import static ca.uhn.fhir.jpa.dao.dstu3.FhirResourceDaoDstu3TerminologyTest.URL_MY_CODE_SYSTEM;
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import static ca.uhn.fhir.jpa.dao.dstu3.FhirResourceDaoDstu3TerminologyTest.URL_MY_VALUE_SET;
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import static org.hamcrest.Matchers.*;
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import static org.junit.Assert.*;
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public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3Test {
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@ -48,73 +51,14 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
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myExtensionalVsId = myValueSetDao.create(upload, mySrd).getId().toUnqualifiedVersionless();
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}
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/**
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* #516
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*/
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@Test
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public void testInvalidFilter() throws Exception {
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String string = IOUtils.toString(getClass().getResourceAsStream("/bug_516_invalid_expansion.json"), StandardCharsets.UTF_8);
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HttpPost post = new HttpPost(ourServerBase+"/ValueSet/%24expand");
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post.setEntity(new StringEntity(string, ContentType.parse(ca.uhn.fhir.rest.api.Constants.CT_FHIR_JSON_NEW)));
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CloseableHttpResponse resp = ourHttpClient.execute(post);
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try {
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String respString = IOUtils.toString(resp.getEntity().getContent(), StandardCharsets.UTF_8);
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ourLog.info(respString);
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|
||||
ourLog.info(resp.toString());
|
||||
|
||||
assertEquals(400, resp.getStatusLine().getStatusCode());
|
||||
assertThat(respString, containsString("Unknown FilterOperator code 'n'"));
|
||||
|
||||
}finally {
|
||||
IOUtils.closeQuietly(resp);
|
||||
}
|
||||
}
|
||||
|
||||
private CodeSystem createExternalCs() {
|
||||
IFhirResourceDao<CodeSystem> codeSystemDao = myCodeSystemDao;
|
||||
IResourceTableDao resourceTableDao = myResourceTableDao;
|
||||
IHapiTerminologySvc termSvc = myTermSvc;
|
||||
|
||||
|
||||
return createExternalCs(codeSystemDao, resourceTableDao, termSvc, mySrd);
|
||||
}
|
||||
|
||||
public static CodeSystem createExternalCs(IFhirResourceDao<CodeSystem> theCodeSystemDao, IResourceTableDao theResourceTableDao, IHapiTerminologySvc theTermSvc, ServletRequestDetails theRequestDetails) {
|
||||
CodeSystem codeSystem = new CodeSystem();
|
||||
codeSystem.setUrl(URL_MY_CODE_SYSTEM);
|
||||
codeSystem.setContent(CodeSystemContentMode.NOTPRESENT);
|
||||
IIdType id = theCodeSystemDao.create(codeSystem, theRequestDetails).getId().toUnqualified();
|
||||
|
||||
ResourceTable table = theResourceTableDao.findOne(id.getIdPartAsLong());
|
||||
|
||||
TermCodeSystemVersion cs = new TermCodeSystemVersion();
|
||||
cs.setResource(table);
|
||||
cs.setResourceVersionId(table.getVersion());
|
||||
|
||||
TermConcept parentA = new TermConcept(cs, "ParentA").setDisplay("Parent A");
|
||||
cs.getConcepts().add(parentA);
|
||||
|
||||
TermConcept childAA = new TermConcept(cs, "childAA").setDisplay("Child AA");
|
||||
parentA.addChild(childAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAA = new TermConcept(cs, "childAAA").setDisplay("Child AAA");
|
||||
childAA.addChild(childAAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAB = new TermConcept(cs, "childAAB").setDisplay("Child AAB");
|
||||
childAA.addChild(childAAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAB = new TermConcept(cs, "childAB").setDisplay("Child AB");
|
||||
parentA.addChild(childAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept parentB = new TermConcept(cs, "ParentB").setDisplay("Parent B");
|
||||
cs.getConcepts().add(parentB);
|
||||
|
||||
theTermSvc.storeNewCodeSystemVersion(table.getId(), URL_MY_CODE_SYSTEM, cs);
|
||||
return codeSystem;
|
||||
}
|
||||
|
||||
private void createExternalCsAndLocalVs() {
|
||||
CodeSystem codeSystem = createExternalCs();
|
||||
|
||||
|
|
@ -131,17 +75,17 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
//@formatter:off
|
||||
CodeSystem codeSystem = new CodeSystem();
|
||||
codeSystem.setUrl(URL_MY_CODE_SYSTEM);
|
||||
codeSystem.setContent(CodeSystemContentMode.COMPLETE);
|
||||
codeSystem.setContent(CodeSystemContentMode.COMPLETE);
|
||||
codeSystem
|
||||
.addConcept().setCode("A").setDisplay("Code A")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AA").setDisplay("Code AA")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AAA").setDisplay("Code AAA"))
|
||||
)
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AB").setDisplay("Code AB"));
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AA").setDisplay("Code AA")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AAA").setDisplay("Code AAA"))
|
||||
)
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AB").setDisplay("Code AB"));
|
||||
codeSystem
|
||||
.addConcept().setCode("B").setDisplay("Code B")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BA").setDisplay("Code BA"))
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BB").setDisplay("Code BB"));
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BA").setDisplay("Code BA"))
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BB").setDisplay("Code BB"));
|
||||
//@formatter:on
|
||||
myCodeSystemDao.create(codeSystem, mySrd);
|
||||
|
||||
|
|
@ -185,49 +129,25 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
assertThat(resp, containsString("<ValueSet xmlns=\"http://hl7.org/fhir\">"));
|
||||
assertThat(resp, containsString("<ValueSet xmlns=\"http://hl7.org/fhir\">"));
|
||||
assertThat(resp, containsString("<expansion>"));
|
||||
assertThat(resp, containsString("<contains>"));
|
||||
assertThat(resp, containsString("<system value=\"http://acme.org\"/>"));
|
||||
assertThat(resp, containsString("<code value=\"8450-9\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure--expiration\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure--expiration\"/>"));
|
||||
assertThat(resp, containsString("</contains>"));
|
||||
assertThat(resp, containsString("<contains>"));
|
||||
assertThat(resp, containsString("<system value=\"http://acme.org\"/>"));
|
||||
assertThat(resp, containsString("<code value=\"11378-7\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
assertThat(resp, containsString("</contains>"));
|
||||
assertThat(resp, containsString("</expansion>"));
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandByIdentifier() {
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "identifier", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
//@formatter:off
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
//@formatter:on
|
||||
|
||||
}
|
||||
|
||||
//
|
||||
|
||||
@Test
|
||||
public void testExpandByIdWithFilter() throws IOException {
|
||||
|
||||
|
|
@ -245,13 +165,56 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
ourLog.info(resp);
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
assertThat(resp, not(containsString("<display value=\"Systolic blood pressure--expiration\"/>")));
|
||||
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* $expand?identifier=foo is legacy.. It's actually not valid in FHIR as of STU3
|
||||
* but we supported it for longer than we should have so I don't want to delete
|
||||
* it right now.
|
||||
*
|
||||
* https://groups.google.com/d/msgid/hapi-fhir/CAN2Cfy8kW%2BAOkgC6VjPsU3gRCpExCNZBmJdi-k5R_TWeyWH4tA%40mail.gmail.com?utm_medium=email&utm_source=footer
|
||||
*/
|
||||
@Test
|
||||
public void testExpandByIdentifier() {
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "identifier", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandByUrl() {
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "url", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandByValueSet() throws IOException {
|
||||
ValueSet toExpand = loadResourceFromClasspath(ValueSet.class, "/extensional-case-3-vs.xml");
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -266,8 +229,8 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
ourLog.info(resp);
|
||||
//@formatter:off
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
//@formatter:on
|
||||
|
||||
}
|
||||
|
|
@ -276,7 +239,7 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
public void testExpandInlineVsAgainstBuiltInCs() throws IOException {
|
||||
createLocalVsPointingAtBuiltInCodeSystem();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -286,10 +249,10 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"M\"/>"));
|
||||
}
|
||||
|
||||
|
|
@ -298,7 +261,7 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
createExternalCsAndLocalVs();
|
||||
assertNotNull(myLocalVs);
|
||||
myLocalVs.setId("");
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -308,16 +271,15 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAA\"/>"));
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAB\"/>"));
|
||||
assertThat(resp, not(containsStringIgnoringCase("<code value=\"ParentA\"/>")));
|
||||
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandInvalidParams() throws IOException {
|
||||
|
|
@ -373,7 +335,7 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
public void testExpandLocalVsAgainstBuiltInCs() throws IOException {
|
||||
createLocalVsPointingAtBuiltInCodeSystem();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -383,22 +345,18 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"M\"/>"));
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
@Test
|
||||
public void testExpandLocalVsAgainstExternalCs() throws IOException {
|
||||
createExternalCsAndLocalVs();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -408,21 +366,21 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAA\"/>"));
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAB\"/>"));
|
||||
assertThat(resp, not(containsStringIgnoringCase("<code value=\"ParentA\"/>")));
|
||||
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandLocalVsCanonicalAgainstExternalCs() throws IOException {
|
||||
createExternalCsAndLocalVs();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -432,21 +390,21 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAA\"/>"));
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAB\"/>"));
|
||||
assertThat(resp, not(containsStringIgnoringCase("<code value=\"ParentA\"/>")));
|
||||
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandLocalVsWithUnknownCode() throws IOException {
|
||||
createExternalCsAndLocalVsWithUnknownCode();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
try {
|
||||
ourClient
|
||||
|
|
@ -461,34 +419,31 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
//@formatter:on
|
||||
}
|
||||
|
||||
/**
|
||||
* #516
|
||||
*/
|
||||
@Test
|
||||
public void testValiedateCodeAgainstBuiltInSystem() {
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("validate-code")
|
||||
.withParameter(Parameters.class, "code", new StringType("BRN"))
|
||||
.andParameter("identifier", new StringType("http://hl7.org/fhir/ValueSet/v2-0487"))
|
||||
.andParameter("system", new StringType("http://hl7.org/fhir/v2/0487"))
|
||||
.useHttpGet()
|
||||
.execute();
|
||||
//@formatter:on
|
||||
public void testInvalidFilter() throws Exception {
|
||||
String string = IOUtils.toString(getClass().getResourceAsStream("/bug_516_invalid_expansion.json"), StandardCharsets.UTF_8);
|
||||
HttpPost post = new HttpPost(ourServerBase + "/ValueSet/%24expand");
|
||||
post.setEntity(new StringEntity(string, ContentType.parse(ca.uhn.fhir.rest.api.Constants.CT_FHIR_JSON_NEW)));
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals("result", respParam.getParameter().get(0).getName());
|
||||
assertEquals(true, ((BooleanType)respParam.getParameter().get(0).getValue()).getValue().booleanValue());
|
||||
|
||||
assertEquals("message", respParam.getParameter().get(1).getName());
|
||||
assertThat(((StringType)respParam.getParameter().get(1).getValue()).getValue(), containsStringIgnoringCase("succeeded"));
|
||||
CloseableHttpResponse resp = ourHttpClient.execute(post);
|
||||
try {
|
||||
|
||||
assertEquals("display", respParam.getParameter().get(2).getName());
|
||||
assertEquals("Burn", ((StringType)respParam.getParameter().get(2).getValue()).getValue());
|
||||
String respString = IOUtils.toString(resp.getEntity().getContent(), StandardCharsets.UTF_8);
|
||||
ourLog.info(respString);
|
||||
|
||||
ourLog.info(resp.toString());
|
||||
|
||||
assertEquals(400, resp.getStatusLine().getStatusCode());
|
||||
assertThat(respString, containsString("Unknown FilterOperator code 'n'"));
|
||||
|
||||
} finally {
|
||||
IOUtils.closeQuietly(resp);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@Test
|
||||
public void testValidateCodeOperationByCodeAndSystemInstance() {
|
||||
//@formatter:off
|
||||
|
|
@ -503,8 +458,8 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals(true, ((BooleanType)respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
}
|
||||
|
||||
@Test
|
||||
|
|
@ -521,8 +476,64 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals(true, ((BooleanType)respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
}
|
||||
|
||||
/**
|
||||
* Technically this is the wrong param name
|
||||
*/
|
||||
@Test
|
||||
public void testValiedateCodeAgainstBuiltInSystem() {
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("validate-code")
|
||||
.withParameter(Parameters.class, "code", new StringType("BRN"))
|
||||
.andParameter("identifier", new StringType("http://hl7.org/fhir/ValueSet/v2-0487"))
|
||||
.andParameter("system", new StringType("http://hl7.org/fhir/v2/0487"))
|
||||
.useHttpGet()
|
||||
.execute();
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals("result", respParam.getParameter().get(0).getName());
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).getValue().booleanValue());
|
||||
|
||||
assertEquals("message", respParam.getParameter().get(1).getName());
|
||||
assertThat(((StringType) respParam.getParameter().get(1).getValue()).getValue(), containsStringIgnoringCase("succeeded"));
|
||||
|
||||
assertEquals("display", respParam.getParameter().get(2).getName());
|
||||
assertEquals("Burn", ((StringType) respParam.getParameter().get(2).getValue()).getValue());
|
||||
}
|
||||
|
||||
/**
|
||||
* Technically this is the right param name
|
||||
*/
|
||||
@Test
|
||||
public void testValiedateCodeAgainstBuiltInSystemByUrl() {
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("validate-code")
|
||||
.withParameter(Parameters.class, "code", new StringType("BRN"))
|
||||
.andParameter("url", new StringType("http://hl7.org/fhir/ValueSet/v2-0487"))
|
||||
.andParameter("system", new StringType("http://hl7.org/fhir/v2/0487"))
|
||||
.useHttpGet()
|
||||
.execute();
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals("result", respParam.getParameter().get(0).getName());
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).getValue().booleanValue());
|
||||
|
||||
assertEquals("message", respParam.getParameter().get(1).getName());
|
||||
assertThat(((StringType) respParam.getParameter().get(1).getValue()).getValue(), containsStringIgnoringCase("succeeded"));
|
||||
|
||||
assertEquals("display", respParam.getParameter().get(2).getName());
|
||||
assertEquals("Burn", ((StringType) respParam.getParameter().get(2).getValue()).getValue());
|
||||
}
|
||||
|
||||
@AfterClass
|
||||
|
|
@ -530,4 +541,38 @@ public class ResourceProviderDstu3ValueSetTest extends BaseResourceProviderDstu3
|
|||
TestUtil.clearAllStaticFieldsForUnitTest();
|
||||
}
|
||||
|
||||
public static CodeSystem createExternalCs(IFhirResourceDao<CodeSystem> theCodeSystemDao, IResourceTableDao theResourceTableDao, IHapiTerminologySvc theTermSvc, ServletRequestDetails theRequestDetails) {
|
||||
CodeSystem codeSystem = new CodeSystem();
|
||||
codeSystem.setUrl(URL_MY_CODE_SYSTEM);
|
||||
codeSystem.setContent(CodeSystemContentMode.NOTPRESENT);
|
||||
IIdType id = theCodeSystemDao.create(codeSystem, theRequestDetails).getId().toUnqualified();
|
||||
|
||||
ResourceTable table = theResourceTableDao.findOne(id.getIdPartAsLong());
|
||||
|
||||
TermCodeSystemVersion cs = new TermCodeSystemVersion();
|
||||
cs.setResource(table);
|
||||
cs.setResourceVersionId(table.getVersion());
|
||||
|
||||
TermConcept parentA = new TermConcept(cs, "ParentA").setDisplay("Parent A");
|
||||
cs.getConcepts().add(parentA);
|
||||
|
||||
TermConcept childAA = new TermConcept(cs, "childAA").setDisplay("Child AA");
|
||||
parentA.addChild(childAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAA = new TermConcept(cs, "childAAA").setDisplay("Child AAA");
|
||||
childAA.addChild(childAAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAB = new TermConcept(cs, "childAAB").setDisplay("Child AAB");
|
||||
childAA.addChild(childAAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAB = new TermConcept(cs, "childAB").setDisplay("Child AB");
|
||||
parentA.addChild(childAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept parentB = new TermConcept(cs, "ParentB").setDisplay("Parent B");
|
||||
cs.getConcepts().add(parentB);
|
||||
|
||||
theTermSvc.storeNewCodeSystemVersion(table.getId(), URL_MY_CODE_SYSTEM, cs);
|
||||
return codeSystem;
|
||||
}
|
||||
|
||||
}
|
||||
|
|
|
|||
|
|
@ -1,35 +1,38 @@
|
|||
package ca.uhn.fhir.jpa.provider.r4;
|
||||
|
||||
import static ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoR4TerminologyTest.URL_MY_CODE_SYSTEM;
|
||||
import static ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoR4TerminologyTest.URL_MY_VALUE_SET;
|
||||
import static org.hamcrest.Matchers.*;
|
||||
import static org.junit.Assert.*;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.nio.charset.StandardCharsets;
|
||||
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.apache.http.client.methods.CloseableHttpResponse;
|
||||
import org.apache.http.client.methods.HttpPost;
|
||||
import org.apache.http.entity.ContentType;
|
||||
import org.apache.http.entity.StringEntity;
|
||||
import org.hl7.fhir.r4.model.*;
|
||||
import org.hl7.fhir.r4.model.CodeSystem.CodeSystemContentMode;
|
||||
import org.hl7.fhir.r4.model.CodeSystem.ConceptDefinitionComponent;
|
||||
import org.hl7.fhir.r4.model.ValueSet.ConceptSetComponent;
|
||||
import org.hl7.fhir.r4.model.ValueSet.FilterOperator;
|
||||
import org.hl7.fhir.instance.model.api.IIdType;
|
||||
import org.junit.*;
|
||||
import org.springframework.transaction.annotation.Transactional;
|
||||
|
||||
import ca.uhn.fhir.jpa.dao.IFhirResourceDao;
|
||||
import ca.uhn.fhir.jpa.dao.data.IResourceTableDao;
|
||||
import ca.uhn.fhir.jpa.entity.*;
|
||||
import ca.uhn.fhir.jpa.entity.ResourceTable;
|
||||
import ca.uhn.fhir.jpa.entity.TermCodeSystemVersion;
|
||||
import ca.uhn.fhir.jpa.entity.TermConcept;
|
||||
import ca.uhn.fhir.jpa.entity.TermConceptParentChildLink.RelationshipTypeEnum;
|
||||
import ca.uhn.fhir.jpa.term.IHapiTerminologySvc;
|
||||
import ca.uhn.fhir.rest.server.exceptions.InvalidRequestException;
|
||||
import ca.uhn.fhir.rest.server.servlet.ServletRequestDetails;
|
||||
import ca.uhn.fhir.util.TestUtil;
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.apache.http.client.methods.CloseableHttpResponse;
|
||||
import org.apache.http.client.methods.HttpPost;
|
||||
import org.apache.http.entity.ContentType;
|
||||
import org.apache.http.entity.StringEntity;
|
||||
import org.hl7.fhir.instance.model.api.IIdType;
|
||||
import org.hl7.fhir.r4.model.*;
|
||||
import org.hl7.fhir.r4.model.CodeSystem.CodeSystemContentMode;
|
||||
import org.hl7.fhir.r4.model.CodeSystem.ConceptDefinitionComponent;
|
||||
import org.hl7.fhir.r4.model.ValueSet.ConceptSetComponent;
|
||||
import org.hl7.fhir.r4.model.ValueSet.FilterOperator;
|
||||
import org.junit.AfterClass;
|
||||
import org.junit.Before;
|
||||
import org.junit.Test;
|
||||
import org.springframework.transaction.annotation.Transactional;
|
||||
|
||||
import java.io.IOException;
|
||||
import java.nio.charset.StandardCharsets;
|
||||
|
||||
import static ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoR4TerminologyTest.URL_MY_CODE_SYSTEM;
|
||||
import static ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoR4TerminologyTest.URL_MY_VALUE_SET;
|
||||
import static org.hamcrest.Matchers.*;
|
||||
import static org.junit.Assert.*;
|
||||
|
||||
public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
||||
|
||||
|
|
@ -48,73 +51,14 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
myExtensionalVsId = myValueSetDao.create(upload, mySrd).getId().toUnqualifiedVersionless();
|
||||
}
|
||||
|
||||
/**
|
||||
* #516
|
||||
*/
|
||||
@Test
|
||||
public void testInvalidFilter() throws Exception {
|
||||
String string = IOUtils.toString(getClass().getResourceAsStream("/bug_516_invalid_expansion.json"), StandardCharsets.UTF_8);
|
||||
HttpPost post = new HttpPost(ourServerBase+"/ValueSet/%24expand");
|
||||
post.setEntity(new StringEntity(string, ContentType.parse(ca.uhn.fhir.rest.api.Constants.CT_FHIR_JSON_NEW)));
|
||||
|
||||
CloseableHttpResponse resp = ourHttpClient.execute(post);
|
||||
try {
|
||||
|
||||
String respString = IOUtils.toString(resp.getEntity().getContent(), StandardCharsets.UTF_8);
|
||||
ourLog.info(respString);
|
||||
|
||||
ourLog.info(resp.toString());
|
||||
|
||||
assertEquals(400, resp.getStatusLine().getStatusCode());
|
||||
assertThat(respString, containsString("Unknown FilterOperator code 'n'"));
|
||||
|
||||
}finally {
|
||||
IOUtils.closeQuietly(resp);
|
||||
}
|
||||
}
|
||||
|
||||
private CodeSystem createExternalCs() {
|
||||
IFhirResourceDao<CodeSystem> codeSystemDao = myCodeSystemDao;
|
||||
IResourceTableDao resourceTableDao = myResourceTableDao;
|
||||
IHapiTerminologySvc termSvc = myTermSvc;
|
||||
|
||||
|
||||
return createExternalCs(codeSystemDao, resourceTableDao, termSvc, mySrd);
|
||||
}
|
||||
|
||||
public static CodeSystem createExternalCs(IFhirResourceDao<CodeSystem> theCodeSystemDao, IResourceTableDao theResourceTableDao, IHapiTerminologySvc theTermSvc, ServletRequestDetails theRequestDetails) {
|
||||
CodeSystem codeSystem = new CodeSystem();
|
||||
codeSystem.setUrl(URL_MY_CODE_SYSTEM);
|
||||
codeSystem.setContent(CodeSystemContentMode.NOTPRESENT);
|
||||
IIdType id = theCodeSystemDao.create(codeSystem, theRequestDetails).getId().toUnqualified();
|
||||
|
||||
ResourceTable table = theResourceTableDao.findOne(id.getIdPartAsLong());
|
||||
|
||||
TermCodeSystemVersion cs = new TermCodeSystemVersion();
|
||||
cs.setResource(table);
|
||||
cs.setResourceVersionId(table.getVersion());
|
||||
|
||||
TermConcept parentA = new TermConcept(cs, "ParentA").setDisplay("Parent A");
|
||||
cs.getConcepts().add(parentA);
|
||||
|
||||
TermConcept childAA = new TermConcept(cs, "childAA").setDisplay("Child AA");
|
||||
parentA.addChild(childAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAA = new TermConcept(cs, "childAAA").setDisplay("Child AAA");
|
||||
childAA.addChild(childAAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAB = new TermConcept(cs, "childAAB").setDisplay("Child AAB");
|
||||
childAA.addChild(childAAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAB = new TermConcept(cs, "childAB").setDisplay("Child AB");
|
||||
parentA.addChild(childAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept parentB = new TermConcept(cs, "ParentB").setDisplay("Parent B");
|
||||
cs.getConcepts().add(parentB);
|
||||
|
||||
theTermSvc.storeNewCodeSystemVersion(table.getId(), URL_MY_CODE_SYSTEM, cs);
|
||||
return codeSystem;
|
||||
}
|
||||
|
||||
private void createExternalCsAndLocalVs() {
|
||||
CodeSystem codeSystem = createExternalCs();
|
||||
|
||||
|
|
@ -131,17 +75,17 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
//@formatter:off
|
||||
CodeSystem codeSystem = new CodeSystem();
|
||||
codeSystem.setUrl(URL_MY_CODE_SYSTEM);
|
||||
codeSystem.setContent(CodeSystemContentMode.COMPLETE);
|
||||
codeSystem.setContent(CodeSystemContentMode.COMPLETE);
|
||||
codeSystem
|
||||
.addConcept().setCode("A").setDisplay("Code A")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AA").setDisplay("Code AA")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AAA").setDisplay("Code AAA"))
|
||||
)
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AB").setDisplay("Code AB"));
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AA").setDisplay("Code AA")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AAA").setDisplay("Code AAA"))
|
||||
)
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("AB").setDisplay("Code AB"));
|
||||
codeSystem
|
||||
.addConcept().setCode("B").setDisplay("Code B")
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BA").setDisplay("Code BA"))
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BB").setDisplay("Code BB"));
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BA").setDisplay("Code BA"))
|
||||
.addConcept(new ConceptDefinitionComponent().setCode("BB").setDisplay("Code BB"));
|
||||
//@formatter:on
|
||||
myCodeSystemDao.create(codeSystem, mySrd);
|
||||
|
||||
|
|
@ -185,49 +129,25 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
assertThat(resp, containsString("<ValueSet xmlns=\"http://hl7.org/fhir\">"));
|
||||
assertThat(resp, containsString("<ValueSet xmlns=\"http://hl7.org/fhir\">"));
|
||||
assertThat(resp, containsString("<expansion>"));
|
||||
assertThat(resp, containsString("<contains>"));
|
||||
assertThat(resp, containsString("<system value=\"http://acme.org\"/>"));
|
||||
assertThat(resp, containsString("<code value=\"8450-9\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure--expiration\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure--expiration\"/>"));
|
||||
assertThat(resp, containsString("</contains>"));
|
||||
assertThat(resp, containsString("<contains>"));
|
||||
assertThat(resp, containsString("<system value=\"http://acme.org\"/>"));
|
||||
assertThat(resp, containsString("<code value=\"11378-7\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
assertThat(resp, containsString("</contains>"));
|
||||
assertThat(resp, containsString("</expansion>"));
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandByIdentifier() {
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "identifier", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
//@formatter:off
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
//@formatter:on
|
||||
|
||||
}
|
||||
|
||||
//
|
||||
|
||||
@Test
|
||||
public void testExpandByIdWithFilter() throws IOException {
|
||||
|
||||
|
|
@ -245,13 +165,31 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
ourLog.info(resp);
|
||||
assertThat(resp, containsString("<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
assertThat(resp, not(containsString("<display value=\"Systolic blood pressure--expiration\"/>")));
|
||||
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandByUrl() {
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "url", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandByValueSet() throws IOException {
|
||||
ValueSet toExpand = loadResourceFromClasspath(ValueSet.class, "/extensional-case-3-vs.xml");
|
||||
|
||||
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
|
|
@ -263,16 +201,17 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
assertThat(resp, stringContainsInOrder(
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
"<code value=\"11378-7\"/>",
|
||||
"<display value=\"Systolic blood pressure at First encounter\"/>"));
|
||||
|
||||
}
|
||||
|
||||
|
||||
@Test
|
||||
public void testExpandInlineVsAgainstBuiltInCs() throws IOException {
|
||||
createLocalVsPointingAtBuiltInCodeSystem();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -282,10 +221,10 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"M\"/>"));
|
||||
}
|
||||
|
||||
|
|
@ -294,7 +233,7 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
createExternalCsAndLocalVs();
|
||||
assertNotNull(myLocalVs);
|
||||
myLocalVs.setId("");
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -304,16 +243,15 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAA\"/>"));
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAB\"/>"));
|
||||
assertThat(resp, not(containsStringIgnoringCase("<code value=\"ParentA\"/>")));
|
||||
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandInvalidParams() throws IOException {
|
||||
|
|
@ -327,7 +265,7 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.execute();
|
||||
fail();
|
||||
} catch (InvalidRequestException e) {
|
||||
assertEquals("HTTP 400 Bad Request: $expand operation at the type level (no ID specified) requires an identifier or a valueSet as a part of the request", e.getMessage());
|
||||
assertEquals("HTTP 400 Bad Request: $expand operation at the type level (no ID specified) requires a url or a valueSet as a part of the request", e.getMessage());
|
||||
}
|
||||
//@formatter:on
|
||||
|
||||
|
|
@ -339,11 +277,11 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "valueSet", toExpand)
|
||||
.andParameter("identifier", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.andParameter("url", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
fail();
|
||||
} catch (InvalidRequestException e) {
|
||||
assertEquals("HTTP 400 Bad Request: $expand must EITHER be invoked at the instance level, or have an identifier specified, or have a ValueSet specified. Can not combine these options.", e.getMessage());
|
||||
assertEquals("HTTP 400 Bad Request: $expand must EITHER be invoked at the instance level, or have a url specified, or have a ValueSet specified. Can not combine these options.", e.getMessage());
|
||||
}
|
||||
//@formatter:on
|
||||
|
||||
|
|
@ -355,11 +293,11 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.onInstance(myExtensionalVsId)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "valueSet", toExpand)
|
||||
.andParameter("identifier", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.andParameter("url", new UriType("http://www.healthintersections.com.au/fhir/ValueSet/extensional-case-2"))
|
||||
.execute();
|
||||
fail();
|
||||
} catch (InvalidRequestException e) {
|
||||
assertEquals("HTTP 400 Bad Request: $expand must EITHER be invoked at the instance level, or have an identifier specified, or have a ValueSet specified. Can not combine these options.", e.getMessage());
|
||||
assertEquals("HTTP 400 Bad Request: $expand must EITHER be invoked at the instance level, or have a url specified, or have a ValueSet specified. Can not combine these options.", e.getMessage());
|
||||
}
|
||||
//@formatter:on
|
||||
|
||||
|
|
@ -369,7 +307,7 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
public void testExpandLocalVsAgainstBuiltInCs() throws IOException {
|
||||
createLocalVsPointingAtBuiltInCodeSystem();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -379,22 +317,18 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"M\"/>"));
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
@Test
|
||||
public void testExpandLocalVsAgainstExternalCs() throws IOException {
|
||||
createExternalCsAndLocalVs();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
|
|
@ -404,45 +338,45 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAA\"/>"));
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAB\"/>"));
|
||||
assertThat(resp, not(containsStringIgnoringCase("<code value=\"ParentA\"/>")));
|
||||
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandLocalVsCanonicalAgainstExternalCs() throws IOException {
|
||||
createExternalCsAndLocalVs();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("expand")
|
||||
.withParameter(Parameters.class, "identifier", new UriType(URL_MY_VALUE_SET))
|
||||
.withParameter(Parameters.class, "url", new UriType(URL_MY_VALUE_SET))
|
||||
.execute();
|
||||
ValueSet expanded = (ValueSet) respParam.getParameter().get(0).getResource();
|
||||
//@formatter:on
|
||||
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(expanded);
|
||||
ourLog.info(resp);
|
||||
|
||||
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAA\"/>"));
|
||||
assertThat(resp, containsStringIgnoringCase("<code value=\"childAAB\"/>"));
|
||||
assertThat(resp, not(containsStringIgnoringCase("<code value=\"ParentA\"/>")));
|
||||
|
||||
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testExpandLocalVsWithUnknownCode() throws IOException {
|
||||
createExternalCsAndLocalVsWithUnknownCode();
|
||||
assertNotNull(myLocalValueSetId);
|
||||
|
||||
|
||||
//@formatter:off
|
||||
try {
|
||||
ourClient
|
||||
|
|
@ -457,34 +391,31 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
//@formatter:on
|
||||
}
|
||||
|
||||
/**
|
||||
* #516
|
||||
*/
|
||||
@Test
|
||||
public void testValiedateCodeAgainstBuiltInSystem() {
|
||||
//@formatter:off
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("validate-code")
|
||||
.withParameter(Parameters.class, "code", new StringType("BRN"))
|
||||
.andParameter("identifier", new StringType("http://hl7.org/fhir/ValueSet/v2-0487"))
|
||||
.andParameter("system", new StringType("http://hl7.org/fhir/v2/0487"))
|
||||
.useHttpGet()
|
||||
.execute();
|
||||
//@formatter:on
|
||||
public void testInvalidFilter() throws Exception {
|
||||
String string = IOUtils.toString(getClass().getResourceAsStream("/bug_516_invalid_expansion.json"), StandardCharsets.UTF_8);
|
||||
HttpPost post = new HttpPost(ourServerBase + "/ValueSet/%24expand");
|
||||
post.setEntity(new StringEntity(string, ContentType.parse(ca.uhn.fhir.rest.api.Constants.CT_FHIR_JSON_NEW)));
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals("result", respParam.getParameter().get(0).getName());
|
||||
assertEquals(true, ((BooleanType)respParam.getParameter().get(0).getValue()).getValue().booleanValue());
|
||||
|
||||
assertEquals("message", respParam.getParameter().get(1).getName());
|
||||
assertThat(((StringType)respParam.getParameter().get(1).getValue()).getValue(), containsStringIgnoringCase("succeeded"));
|
||||
CloseableHttpResponse resp = ourHttpClient.execute(post);
|
||||
try {
|
||||
|
||||
assertEquals("display", respParam.getParameter().get(2).getName());
|
||||
assertEquals("Burn", ((StringType)respParam.getParameter().get(2).getValue()).getValue());
|
||||
String respString = IOUtils.toString(resp.getEntity().getContent(), StandardCharsets.UTF_8);
|
||||
ourLog.info(respString);
|
||||
|
||||
ourLog.info(resp.toString());
|
||||
|
||||
assertEquals(400, resp.getStatusLine().getStatusCode());
|
||||
assertThat(respString, containsString("Unknown FilterOperator code 'n'"));
|
||||
|
||||
} finally {
|
||||
IOUtils.closeQuietly(resp);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@Test
|
||||
public void testValidateCodeOperationByCodeAndSystemInstance() {
|
||||
//@formatter:off
|
||||
|
|
@ -499,8 +430,8 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals(true, ((BooleanType)respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
}
|
||||
|
||||
@Test
|
||||
|
|
@ -517,8 +448,33 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals(true, ((BooleanType)respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).booleanValue());
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testValiedateCodeAgainstBuiltInSystem() {
|
||||
Parameters respParam = ourClient
|
||||
.operation()
|
||||
.onType(ValueSet.class)
|
||||
.named("validate-code")
|
||||
.withParameter(Parameters.class, "code", new StringType("BRN"))
|
||||
.andParameter("url", new StringType("http://hl7.org/fhir/ValueSet/v2-0487"))
|
||||
.andParameter("system", new StringType("http://hl7.org/fhir/v2/0487"))
|
||||
.useHttpGet()
|
||||
.execute();
|
||||
|
||||
String resp = myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(respParam);
|
||||
ourLog.info(resp);
|
||||
|
||||
assertEquals("result", respParam.getParameter().get(0).getName());
|
||||
assertEquals(true, ((BooleanType) respParam.getParameter().get(0).getValue()).getValue().booleanValue());
|
||||
|
||||
assertEquals("message", respParam.getParameter().get(1).getName());
|
||||
assertThat(((StringType) respParam.getParameter().get(1).getValue()).getValue(), containsStringIgnoringCase("succeeded"));
|
||||
|
||||
assertEquals("display", respParam.getParameter().get(2).getName());
|
||||
assertEquals("Burn", ((StringType) respParam.getParameter().get(2).getValue()).getValue());
|
||||
}
|
||||
|
||||
@AfterClass
|
||||
|
|
@ -526,4 +482,38 @@ public class ResourceProviderR4ValueSetTest extends BaseResourceProviderR4Test {
|
|||
TestUtil.clearAllStaticFieldsForUnitTest();
|
||||
}
|
||||
|
||||
public static CodeSystem createExternalCs(IFhirResourceDao<CodeSystem> theCodeSystemDao, IResourceTableDao theResourceTableDao, IHapiTerminologySvc theTermSvc, ServletRequestDetails theRequestDetails) {
|
||||
CodeSystem codeSystem = new CodeSystem();
|
||||
codeSystem.setUrl(URL_MY_CODE_SYSTEM);
|
||||
codeSystem.setContent(CodeSystemContentMode.NOTPRESENT);
|
||||
IIdType id = theCodeSystemDao.create(codeSystem, theRequestDetails).getId().toUnqualified();
|
||||
|
||||
ResourceTable table = theResourceTableDao.findOne(id.getIdPartAsLong());
|
||||
|
||||
TermCodeSystemVersion cs = new TermCodeSystemVersion();
|
||||
cs.setResource(table);
|
||||
cs.setResourceVersionId(table.getVersion());
|
||||
|
||||
TermConcept parentA = new TermConcept(cs, "ParentA").setDisplay("Parent A");
|
||||
cs.getConcepts().add(parentA);
|
||||
|
||||
TermConcept childAA = new TermConcept(cs, "childAA").setDisplay("Child AA");
|
||||
parentA.addChild(childAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAA = new TermConcept(cs, "childAAA").setDisplay("Child AAA");
|
||||
childAA.addChild(childAAA, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAAB = new TermConcept(cs, "childAAB").setDisplay("Child AAB");
|
||||
childAA.addChild(childAAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept childAB = new TermConcept(cs, "childAB").setDisplay("Child AB");
|
||||
parentA.addChild(childAB, RelationshipTypeEnum.ISA);
|
||||
|
||||
TermConcept parentB = new TermConcept(cs, "ParentB").setDisplay("Parent B");
|
||||
cs.getConcepts().add(parentB);
|
||||
|
||||
theTermSvc.storeNewCodeSystemVersion(table.getId(), URL_MY_CODE_SYSTEM, cs);
|
||||
return codeSystem;
|
||||
}
|
||||
|
||||
}
|
||||
|
|
|
|||
|
|
@ -12,6 +12,21 @@
|
|||
of changes to index tables when updating a resource with contents that
|
||||
only make minor changes
|
||||
</action>
|
||||
<action type="fix">
|
||||
In FHIR DSTU3 the
|
||||
<![CDATA[<code>ValueSet/$expand?identifier=foo</code>]]>
|
||||
and
|
||||
<![CDATA[<code>ValueSet/$validate-code?identifier=foo</code>]]>
|
||||
parameters were changed to
|
||||
<![CDATA[<code>ValueSet/$expand?url=foo</code>]]>
|
||||
and
|
||||
<![CDATA[<code>ValueSet/$validate-code?url=foo</code>]]>
|
||||
respectively, but the JPA server had not caught up. The
|
||||
JPA DSTU3 server has been adjusted to accept either "identifier"
|
||||
or "url" (with "url" taking precedence), and the JPA R4 server
|
||||
has been changed to only accept "url".
|
||||
Thanks to Avinash Shanbhag for reporting!
|
||||
</action>
|
||||
</release>
|
||||
<release version="3.0.0" date="2017-09-27">
|
||||
<action type="add">
|
||||
|
|
|
|||
Loading…
Reference in New Issue