Documentation updates

examples/pom.xml

@@ -5,7 +5,7 @@
 		<groupId>ca.uhn.hapi.fhir</groupId>
 		<artifactId>hapi-fhir</artifactId>
 		<version>0.8-SNAPSHOT</version>
-		<relativePath>../../pom.xml</relativePath>
+		<relativePath>../pom.xml</relativePath>
 	</parent>
 
 	<artifactId>hapi-fhir-base-examples</artifactId>

examples/src/main/java/example/Extensions.java

@@ -35,12 +35,18 @@ patient.addUndeclaredExtension(ext);
 
 
 //START SNIPPET: resourceStringExtension
+// Continuing the example from above, we will add a name to the patient, and then
+// add an extension to part of that name
 HumanNameDt name = patient.addName();
 name.addFamily().setValue("Shmoe");
+
+// Add a new "given name", which is of type StringDt 
 StringDt given = name.addGiven();
 given.setValue("Joe");
-ExtensionDt ext2 = new ExtensionDt(false, "http://examples.com#moreext", new StringDt("Hello"));
+
-given.addUndeclaredExtension(ext2);
+// Create an extension and add it to the StringDt
+ExtensionDt givenExt = new ExtensionDt(false, "http://examples.com#moreext", new StringDt("Hello"));
+given.addUndeclaredExtension(givenExt);
 //END SNIPPET: resourceStringExtension
 
 String output = new FhirContext().newXmlParser().setPrettyPrint(true).encodeResourceToString(patient);
@@ -65,9 +71,11 @@ public void foo() {
 //START SNIPPET: subExtension
 Patient patient = new Patient();
 
+// Add an extension (initially with no contents) to the resource 
 ExtensionDt parent = new ExtensionDt(false, "http://example.com#parent");
 patient.addUndeclaredExtension(parent);
 
+// Add two extensions as children to the parent extension
 ExtensionDt child1 = new ExtensionDt(false, "http://example.com#childOne", new StringDt("value1"));
 parent.addUndeclaredExtension(child1);
 

hapi-fhir-base/examples/.settings/org.eclipse.core.resources.prefs

@@ -1,3 +0,0 @@
-eclipse.preferences.version=1
-encoding//src/main/java=UTF-8
-encoding/<project>=UTF-8

hapi-fhir-base/examples/.settings/org.eclipse.jdt.core.prefs

@@ -1,289 +0,0 @@
-eclipse.preferences.version=1
-org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.6
-org.eclipse.jdt.core.compiler.compliance=1.6
-org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning
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-org.eclipse.jdt.core.formatter.alignment_for_binary_expression=16
-org.eclipse.jdt.core.formatter.alignment_for_compact_if=16
-org.eclipse.jdt.core.formatter.alignment_for_conditional_expression=80
-org.eclipse.jdt.core.formatter.alignment_for_enum_constants=0
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-org.eclipse.jdt.core.formatter.alignment_for_multiple_fields=16
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-org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_switch=insert
-org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_synchronized=insert
-org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_try=insert
-org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_while=insert
-org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_return=insert
-org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_throw=insert
-org.eclipse.jdt.core.formatter.insert_space_before_postfix_operator=do not insert
-org.eclipse.jdt.core.formatter.insert_space_before_prefix_operator=do not insert
-org.eclipse.jdt.core.formatter.insert_space_before_question_in_conditional=insert
-org.eclipse.jdt.core.formatter.insert_space_before_question_in_wildcard=do not insert
-org.eclipse.jdt.core.formatter.insert_space_before_semicolon=do not insert
-org.eclipse.jdt.core.formatter.insert_space_before_semicolon_in_for=do not insert
-org.eclipse.jdt.core.formatter.insert_space_before_semicolon_in_try_resources=do not insert
-org.eclipse.jdt.core.formatter.insert_space_before_unary_operator=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_brackets_in_array_type_reference=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_braces_in_array_initializer=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_brackets_in_array_allocation_expression=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_annotation_type_member_declaration=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_constructor_declaration=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_enum_constant=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_declaration=do not insert
-org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_invocation=do not insert
-org.eclipse.jdt.core.formatter.join_lines_in_comments=true
-org.eclipse.jdt.core.formatter.join_wrapped_lines=true
-org.eclipse.jdt.core.formatter.keep_else_statement_on_same_line=false
-org.eclipse.jdt.core.formatter.keep_empty_array_initializer_on_one_line=false
-org.eclipse.jdt.core.formatter.keep_imple_if_on_one_line=false
-org.eclipse.jdt.core.formatter.keep_then_statement_on_same_line=false
-org.eclipse.jdt.core.formatter.lineSplit=160
-org.eclipse.jdt.core.formatter.never_indent_block_comments_on_first_column=false
-org.eclipse.jdt.core.formatter.never_indent_line_comments_on_first_column=false
-org.eclipse.jdt.core.formatter.number_of_blank_lines_at_beginning_of_method_body=0
-org.eclipse.jdt.core.formatter.number_of_empty_lines_to_preserve=1
-org.eclipse.jdt.core.formatter.put_empty_statement_on_new_line=true
-org.eclipse.jdt.core.formatter.tabulation.char=space
-org.eclipse.jdt.core.formatter.tabulation.size=3
-org.eclipse.jdt.core.formatter.use_on_off_tags=false
-org.eclipse.jdt.core.formatter.use_tabs_only_for_leading_indentations=true
-org.eclipse.jdt.core.formatter.wrap_before_binary_operator=true
-org.eclipse.jdt.core.formatter.wrap_before_or_operator_multicatch=true
-org.eclipse.jdt.core.formatter.wrap_outer_expressions_when_nested=true

hapi-fhir-base/examples/.settings/org.eclipse.jdt.ui.prefs

@@ -1,3 +0,0 @@
-eclipse.preferences.version=1
-formatter_profile=_examples-format
-formatter_settings_version=12

hapi-fhir-base/examples/.settings/org.eclipse.m2e.core.prefs

@@ -1,4 +0,0 @@
-activeProfiles=
-eclipse.preferences.version=1
-resolveWorkspaceProjects=true
-version=1

pom.xml

@@ -540,6 +540,7 @@
 				<module>hapi-fhir-base</module>
 				<module>hapi-fhir-structures-dstu</module>
 				<module>hapi-fhir-structures-dev</module>
+				<module>examples</module>
 			</modules>
 		</profile>
 		<profile>
@@ -551,7 +552,6 @@
 				<module>hapi-deployable-pom</module>
 				<module>hapi-fhir-base</module>
 				<module>hapi-fhir-oauth2</module>
-				<module>hapi-fhir-base/examples</module>
 				<module>hapi-fhir-base/testmindeps</module>
 				<module>hapi-tinder-plugin</module>
 				<module>hapi-tinder-test</module>

src/changes/changes.xml

@@ -19,6 +19,15 @@
 				Remove unnessecary IOException from narrative generator API. Thanks to 
 				Petro Mykhailysyn for the pull request!  
 			</action>			
+			<action type="add" issue="48">
+				Introduced a new 
+				<![CDATA[<code>@ProvidesResources</code>]]> annotation which can be added to
+				resource provider and servers to allow them to declare additional resource
+				classes they are able to serve. This is useful if you have a server which can
+				serve up multiple classes for the same resource type (e.g. a server that sometimes
+				returns a default Patient, but sometimes uses a custom subclass). 
+				Thanks to Bill de Beaubien for the pull request!
+			</action>			
 		</release>			
 		<release version="0.7" date="2014-Oct-23">
 			<action type="add" issue="30">

src/site/site.xml

@@ -60,7 +60,7 @@
 		<menu name="Documentation">
 			<item name="Introduction" href="./doc_intro.html" />
 			<item name="The Data Model" href="./doc_fhirobjects.html">
-				<item name="Extensions" href="./doc_extensions.html" />
+				<item name="Profiles &amp; Extensions" href="./doc_extensions.html" />
 				<item name="Resource References" href="./doc_resource_references.html" />
 				<item name="Tags" href="./doc_tags.html" />
 				<item name="Validation" href="./doc_validation.html" />
@@ -85,9 +85,9 @@
 		</menu>
 
 		<menu name="JavaDocs">
-			<item name="API (Core)" href="./apidocs/index.html" />
+			<item name="Core API" href="./apidocs/index.html" />
-			<item name="API (DSTU Model)" href="./apidocs-dstu/index.html" />
+			<item name="Model API (DSTU1)" href="./apidocs-dstu/index.html" />
-			<item name="API (DEV Model)" href="./apidocs-dev/index.html" />
+			<item name="Model API (DEV)" href="./apidocs-dev/index.html" />
 			<item name="Source Code" href=".https://github.com/jamesagnew/hapi-fhir" />
 		</menu>
 

src/site/xdoc/doc_extensions.xml

@@ -2,7 +2,7 @@
 <document xmlns="http://maven.apache.org/XDOC/2.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/XDOC/2.0 http://maven.apache.org/xsd/xdoc-2.0.xsd">
 
 	<properties>
-		<title>Extensions - HAPI FHIR</title>
+		<title>Profiles and Extensions - HAPI FHIR</title>
 		<author email="jamesagnew@users.sourceforge.net">James Agnew</author>
 	</properties>
 
@@ -13,19 +13,21 @@
 			<macro name="toc">
 			</macro>
 			
-			<p>
-				Extensions are a key part of the FHIR specification, providing a standardized
-				way of placing additional data in a resource. 
-			</p>
-
 		</section>
 		
 		<section name="Undeclared Extensions">
 			
 			<p>
-				All HAPI FHIR Resource objects support "undeclared extensions",
+				Extensions are a key part of the FHIR specification, providing a standardized
-				which are arbitrary extensions you can add.
+				way of placing additional data in a resource. 
 			</p>
+
+			<p>
+				The simplest way to interact with extensions (i.e. to add them to resources you are creating, or
+				to read them from resources you are consuming) is to treat them as "undeclared extensions".
+				Undeclared extensions can be added to any of the built in FHIR resource types that come with HAPI-FHIR.
+			</p>
+			
 			<macro name="snippet">
 				<param name="id" value="resourceExtension" />
 				<param name="file" value="examples/src/main/java/example/Extensions.java" />
@@ -56,8 +58,8 @@
 			<subsection name="Retrieving Extension Values">
 
 				<p>
-					HAPI provides a few ways of getting data back out of
+					HAPI provides a few ways of accessing extension values in resources 
-					an extension value (i.e. from a received resource):
+					which are receieved from other sources (i.e. downloaded by a client).
 				</p>
 				<macro name="snippet">
 					<param name="id" value="parseExtension" />