honeymoose
/
hapi-fhir
mirror of https://github.com/hapifhir/hapi-fhir.git
1
0
Fork 0
Code Issues Packages Projects Releases Wiki Activity

More tutorial samples, as well as credit for #54

This commit is contained in:
James Agnew 2014-11-20 16:29:10 -05:00
parent 06a1e459d4
commit 6e293a6623
9 changed files with 348 additions and 3 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

20
hapi-fhir-structures-dstu/src/main/java/ca/uhn/fhir/rest/server/audit/AdverseReactionAuditor.java
View File

@ -1,5 +1,25 @@
package ca.uhn.fhir.rest.server.audit;
/*
* #%L
* HAPI FHIR Structures - DSTU (FHIR 0.80)
* %%
* Copyright (C) 2014 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import java.util.HashMap;
import java.util.Map;

20
hapi-fhir-structures-dstu/src/main/java/ca/uhn/fhir/rest/server/audit/ObservationAuditor.java
View File

@ -1,5 +1,25 @@
package ca.uhn.fhir.rest.server.audit;
/*
* #%L
* HAPI FHIR Structures - DSTU (FHIR 0.80)
* %%
* Copyright (C) 2014 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import java.util.HashMap;
import java.util.Map;

20
hapi-fhir-structures-dstu/src/main/java/ca/uhn/fhir/rest/server/audit/ProcedureAuditor.java
View File

@ -1,5 +1,25 @@
package ca.uhn.fhir.rest.server.audit;
/*
* #%L
* HAPI FHIR Structures - DSTU (FHIR 0.80)
* %%
* Copyright (C) 2014 University Health Network
* %%
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* #L%
*/
import java.util.HashMap;
import java.util.Map;

27
hapi-fhir-tutorial/simple-server/.classpath Normal file
View File

@ -0,0 +1,27 @@
<?xml version="1.0" encoding="UTF-8"?>
<classpath>
<classpathentry kind="src" output="target/classes" path="src/main/java">
<attributes>
<attribute name="optional" value="true"/>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="src" output="target/test-classes" path="src/test/java">
<attributes>
<attribute name="optional" value="true"/>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.6">
<attributes>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER">
<attributes>
<attribute name="maven.pomderived" value="true"/>
<attribute name="org.eclipse.jst.component.dependency" value="/WEB-INF/lib"/>
</attributes>
</classpathentry>
<classpathentry kind="output" path="target/classes"/>
</classpath>

42
hapi-fhir-tutorial/simple-server/.project Normal file
View File

@ -0,0 +1,42 @@
<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
<name>hapi-fhir-example-simple-server</name>
<comment></comment>
<projects>
</projects>
<buildSpec>
<buildCommand>
<name>org.eclipse.wst.jsdt.core.javascriptValidator</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.jdt.core.javabuilder</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.wst.common.project.facet.core.builder</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.m2e.core.maven2Builder</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.wst.validation.validationbuilder</name>
<arguments>
</arguments>
</buildCommand>
</buildSpec>
<natures>
<nature>org.eclipse.jem.workbench.JavaEMFNature</nature>
<nature>org.eclipse.wst.common.modulecore.ModuleCoreNature</nature>
<nature>org.eclipse.jdt.core.javanature</nature>
<nature>org.eclipse.m2e.core.maven2Nature</nature>
<nature>org.eclipse.wst.common.project.facet.core.nature</nature>
<nature>org.eclipse.wst.jsdt.core.jsNature</nature>
</natures>
</projectDescription>

122
hapi-fhir-tutorial/simple-server/pom.xml Normal file
View File

@ -0,0 +1,122 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<!--
HAPI projects use the Sonatype OSS parent project.
You do not need to use this <parent> in your own projects.
-->
<parent>
<groupId>org.sonatype.oss</groupId>
<artifactId>oss-parent</artifactId>
<version>7</version>
</parent>
<groupId>ca.uhn.hapi.example</groupId>
<artifactId>hapi-fhir-example-simple-server</artifactId>
<version>0.8-SNAPSHOT</version>
<packaging>war</packaging>
<name>HAPI FHIR Example - Simple Server</name>
<repositories>
<repository>
<id>oss-snapshots</id>
<snapshots>
<enabled>true</enabled>
</snapshots>
<url>https://oss.sonatype.org/content/repositories/snapshots/</url>
</repository>
</repositories>
<dependencies>
<!-- This dependency includes the core HAPI-FHIR classes -->
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-base</artifactId>
<version>0.8-SNAPSHOT</version>
</dependency>
<!-- At least one "structures" JAR must also be included -->
<dependency>
<groupId>ca.uhn.hapi.fhir</groupId>
<artifactId>hapi-fhir-structures-dstu</artifactId>
<version>0.8-SNAPSHOT</version>
</dependency>
<!--
HAPI-FHIR uses Logback for logging support. The logback library is included
automatically by Maven as a part of the hapi-fhir-base dependency, but you
also need to include a logging library. Logback is used here, but log4j
would also be fine.
-->
<dependency>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-classic</artifactId>
<version>1.1.2</version>
</dependency>
<!-- Needed for JEE/Servlet support -->
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
<version>3.0.1</version>
<scope>provided</scope>
</dependency>
</dependencies>
<build>
<!--
Tells Maven to name the generated WAR file as
restful-server-example.war
-->
<finalName>restful-server-example</finalName>
<!--
The following is not required for the application to build, but
allows you to test it by issuing "mvn jetty:run" from the command
line.
-->
<pluginManagement>
<plugins>
<plugin>
<groupId>org.eclipse.jetty</groupId>
<artifactId>jetty-maven-plugin</artifactId>
<version>9.1.1.v20140108</version>
</plugin>
</plugins>
</pluginManagement>
<plugins>
<!--
Tell Maven which Java source version you want to use
-->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<!--
The deploy plugin is configured as a part of the HAPI
internal build process, you do not need to include
the <plugin> below in your own projects
-->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-deploy-plugin</artifactId>
<configuration>
<skip>false</skip>
</configuration>
</plugin>
</plugins>
</build>
</project>

89
hapi-fhir-tutorial/simple-server/src/main/webapp/WEB-INF/web.xml Normal file
View File

@ -0,0 +1,89 @@
<?xml version="1.0" encoding="UTF-8"?>
<web-app version="2.5">
<!-- The following entries are all here to enable the tester web application, and are not actually a part of the underlying FHIR server. -->
<listener>
<listener-class>org.springframework.web.context.ContextLoaderListener</listener-class>
</listener>
<context-param>
<param-name>contextConfigLocation</param-name>
<param-value>
/WEB-INF/hapi-fhir-tester-application-context.xml
/WEB-INF/hapi-fhir-tester-config.xml
</param-value>
</context-param>
<servlet>
<servlet-name>spring</servlet-name>
<servlet-class>org.springframework.web.servlet.DispatcherServlet</servlet-class>
<init-param>
<param-name>contextConfigLocation</param-name>
<param-value>
/WEB-INF/hapi-fhir-tester-application-context.xml
/WEB-INF/hapi-fhir-tester-config.xml
</param-value>
</init-param>
<load-on-startup>2</load-on-startup>
</servlet>
<servlet-mapping>
<servlet-name>spring</servlet-name>
<url-pattern>/tester/*</url-pattern>
</servlet-mapping>
<!-- This filters provide support for Cross Origin Resource Sharing (CORS) -->
<filter>
<filter-name>CORS Filter</filter-name>
<filter-class>org.ebaysf.web.cors.CORSFilter</filter-class>
<init-param>
<description>A comma separated list of allowed origins. Note: An '*' cannot be used for an allowed origin when using credentials.</description>
<param-name>cors.allowed.origins</param-name>
<param-value>*</param-value>
</init-param>
<init-param>
<description>A comma separated list of HTTP verbs, using which a CORS request can be made.</description>
<param-name>cors.allowed.methods</param-name>
<param-value>GET,POST,PUT,DELETE,OPTIONS</param-value>
</init-param>
<init-param>
<description>A comma separated list of allowed headers when making a non simple CORS request.</description>
<param-name>cors.allowed.headers</param-name>
<param-value>X-FHIR-Starter,Origin,Accept,X-Requested-With,Content-Type,Access-Control-Request-Method,Access-Control-Request-Headers</param-value>
</init-param>
<init-param>
<description>A comma separated list non-standard response headers that will be exposed to XHR2 object.</description>
<param-name>cors.exposed.headers</param-name>
<param-value>Location,Content-Location</param-value>
</init-param>
<init-param>
<description>A flag that suggests if CORS is supported with cookies</description>
<param-name>cors.support.credentials</param-name>
<param-value>true</param-value>
</init-param>
<init-param>
<description>A flag to control logging</description>
<param-name>cors.logging.enabled</param-name>
<param-value>true</param-value>
</init-param>
<init-param>
<description>Indicates how long (in seconds) the results of a preflight request can be cached in a preflight result cache.</description>
<param-name>cors.preflight.maxage</param-name>
<param-value>300</param-value>
</init-param>
</filter>
<filter-mapping>
<filter-name>CORS Filter</filter-name>
<url-pattern>/*</url-pattern>
</filter-mapping>
<!-- The following entries are for the actual underlying FHIR server. -->
<servlet>
<servlet-name>fhir</servlet-name>
<servlet-class>ca.uhn.example.servlet.ExampleRestfulServlet</servlet-class>
</servlet>
<servlet-mapping>
<servlet-name>fhir</servlet-name>
<url-pattern>/fhir/*</url-pattern>
</servlet-mapping>
</web-app>

2
pom.xml
View File

@ -102,7 +102,7 @@
<organization>Arizona State University</organization>
</developer>
<developer>
<id>jathman</id>
<id>jjathman</id>
<name>Joe Athman</name>
</developer>
<developer>

9
src/changes/changes.xml
View File

@ -92,7 +92,7 @@
but the version bundled with IBM's JDK is flaky and resulted in a number
of problems when deploying to Websphere.
</action>
<action type="fix" issue="50">
<action type="fix" issue="50" dev="jjathman">
Primitive datatypes now preserve their original string value when parsing resources,
as well as containing the "parsed value". For instance, a DecimalDt field value of
<![CDATA[<code>1.0000</code>]]> will be parsed into the corresponding
@ -146,6 +146,11 @@
Do not strip version from resource references in resources returned
from server search methods. Thanks to Bill de Beaubien for reporting!
</action>
<action type="fix" dev="jjathman" issue="54">
Correct an issue with the validator where changes to the underlying
OperationOutcome produced by a validation cycle cause the validation
results to be incorrect.
</action>
</release>
<release version="0.7" date="2014-Oct-23">
<action type="add" issue="30">
@ -260,7 +265,7 @@
trying out the HAPI server modules. Thanks to Preston Lee for the pull request, and for
offering to maintain this!
</action>
<action type="add" issue="32" dev="jathman">
<action type="add" issue="32" dev="jjathman">
Change validation API so that it uses a return type instead of exceptions to communicate
validation failures. Thanks to Joe Athman for the pull request!
</action>