Merge branch 'master' into loinc_loader_update
This commit is contained in:
jamesagnew
commit
817569228b
|
|
@ -2343,6 +2343,78 @@ public class FhirSystemDaoR4Test extends BaseJpaR4SystemTest {
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testTransactionWithConditionalUpdateDoesntUpdateIfNoChange() {
|
||||||
|
|
||||||
|
Observation obs = new Observation();
|
||||||
|
obs.addIdentifier()
|
||||||
|
.setSystem("http://acme.org")
|
||||||
|
.setValue("ID1");
|
||||||
|
obs
|
||||||
|
.getCode()
|
||||||
|
.addCoding()
|
||||||
|
.setSystem("http://loinc.org")
|
||||||
|
.setCode("29463-7");
|
||||||
|
obs.setEffective(new DateTimeType("2011-09-03T11:13:00-04:00"));
|
||||||
|
obs.setValue(new Quantity()
|
||||||
|
.setValue(new BigDecimal("123.4"))
|
||||||
|
.setCode("kg")
|
||||||
|
.setSystem("http://unitsofmeasure.org")
|
||||||
|
.setUnit("kg"));
|
||||||
|
Bundle input = new Bundle();
|
||||||
|
input.setType(BundleType.TRANSACTION);
|
||||||
|
input
|
||||||
|
.addEntry()
|
||||||
|
.setFullUrl("urn:uuid:0001")
|
||||||
|
.setResource(obs)
|
||||||
|
.getRequest()
|
||||||
|
.setMethod(HTTPVerb.PUT)
|
||||||
|
.setUrl("Observation?identifier=http%3A%2F%2Facme.org|ID1");
|
||||||
|
|
||||||
|
Bundle output = mySystemDao.transaction(mySrd, input);
|
||||||
|
assertEquals(1, output.getEntry().size());
|
||||||
|
IdType id = new IdType(output.getEntry().get(0).getResponse().getLocation());
|
||||||
|
assertEquals("Observation", id.getResourceType());
|
||||||
|
assertEquals("1", id.getVersionIdPart());
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Try again with same contents
|
||||||
|
*/
|
||||||
|
|
||||||
|
Observation obs2 = new Observation();
|
||||||
|
obs2.addIdentifier()
|
||||||
|
.setSystem("http://acme.org")
|
||||||
|
.setValue("ID1");
|
||||||
|
obs2
|
||||||
|
.getCode()
|
||||||
|
.addCoding()
|
||||||
|
.setSystem("http://loinc.org")
|
||||||
|
.setCode("29463-7");
|
||||||
|
obs2.setEffective(new DateTimeType("2011-09-03T11:13:00-04:00"));
|
||||||
|
obs2.setValue(new Quantity()
|
||||||
|
.setValue(new BigDecimal("123.4"))
|
||||||
|
.setCode("kg")
|
||||||
|
.setSystem("http://unitsofmeasure.org")
|
||||||
|
.setUnit("kg"));
|
||||||
|
Bundle input2 = new Bundle();
|
||||||
|
input2.setType(BundleType.TRANSACTION);
|
||||||
|
input2
|
||||||
|
.addEntry()
|
||||||
|
.setFullUrl("urn:uuid:0001")
|
||||||
|
.setResource(obs2)
|
||||||
|
.getRequest()
|
||||||
|
.setMethod(HTTPVerb.PUT)
|
||||||
|
.setUrl("Observation?identifier=http%3A%2F%2Facme.org|ID1");
|
||||||
|
|
||||||
|
Bundle output2 = mySystemDao.transaction(mySrd, input2);
|
||||||
|
assertEquals(1, output2.getEntry().size());
|
||||||
|
IdType id2 = new IdType(output2.getEntry().get(0).getResponse().getLocation());
|
||||||
|
assertEquals("Observation", id2.getResourceType());
|
||||||
|
assertEquals("1", id2.getVersionIdPart());
|
||||||
|
|
||||||
|
assertEquals(id.getValue(), id2.getValue());
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testTransactionWithIfMatch() {
|
public void testTransactionWithIfMatch() {
|
||||||
Patient p = new Patient();
|
Patient p = new Patient();
|
||||||
|
|
|
||||||
|
|
@ -6,7 +6,7 @@
|
||||||
<title>HAPI FHIR Changelog</title>
|
<title>HAPI FHIR Changelog</title>
|
||||||
</properties>
|
</properties>
|
||||||
<body>
|
<body>
|
||||||
<release version="3.3.0" date="TBD">
|
<release version="3.3.0" date="2018-03-29">
|
||||||
<action type="add">
|
<action type="add">
|
||||||
This release corrects an inefficiency in the JPA Server, but requires a schema
|
This release corrects an inefficiency in the JPA Server, but requires a schema
|
||||||
change in order to update. Prior to this version of HAPI FHIR, a CLOB column
|
change in order to update. Prior to this version of HAPI FHIR, a CLOB column
|
||||||
|
|
@ -14,12 +14,29 @@
|
||||||
tables: HFJ_RESOURCE and HFJ_RES_VER. Because the same content was stored in two
|
tables: HFJ_RESOURCE and HFJ_RES_VER. Because the same content was stored in two
|
||||||
places, the database consumed more space than is needed to.
|
places, the database consumed more space than is needed to.
|
||||||
<![CDATA[<br/><br/>]]>
|
<![CDATA[<br/><br/>]]>
|
||||||
In order to reduce this duplication, two columns have been removed from the
|
In order to reduce this duplication, the
|
||||||
HFJ_RESOURCE table. This means that on any database that is being upgraded
|
<![CDATA[<code>RES_TEXT</code> and <code>RES_ENCODING</code>]]>
|
||||||
to HAPI FHIR 3.3.0+, you will need to remove the columns
|
columns have been
|
||||||
<![CDATA[<code>RES_TEXT</code> and <code>RES_ENCODING</code>]]> (or
|
<![CDATA[<b>dropped</b>]]>
|
||||||
set them to nullable if you want an easy means of rolling back). Naturally
|
from the
|
||||||
you should back your database up prior to making this change.
|
<![CDATA[<code>HFJ_RESOURCE]]>
|
||||||
|
table, and the
|
||||||
|
<![CDATA[<code>RES_TEXT</code> and <code>RES_ENCODING</code>]]>
|
||||||
|
columns have been
|
||||||
|
<![CDATA[<b>made NULLABLE</b>]]>
|
||||||
|
on the
|
||||||
|
<![CDATA[<code>HFJ_RES_VER]]>
|
||||||
|
table.
|
||||||
|
<![CDATA[<br/><br/>]]>
|
||||||
|
The following migration script may be used to apply these changes to
|
||||||
|
your database. Naturally you should back your database up prior to
|
||||||
|
making this change.
|
||||||
|
<![CDATA[
|
||||||
|
<pre>ALTER TABLE hfj_resource DROP COLUMN res_text;
|
||||||
|
ALTER TABLE hfj_resource DROP COLUMN res_encoding;
|
||||||
|
ALTER TABLE hfj_res_ver ALTER COLUMN res_encoding DROP NOT NULL;
|
||||||
|
ALTER TABLE hfj_res_ver ALTER COLUMN res_text DROP NOT NULL;</pre>
|
||||||
|
]]>
|
||||||
</action>
|
</action>
|
||||||
<action type="fix">
|
<action type="fix">
|
||||||
The validation module has been refactored to use the R4 (currently maintained)
|
The validation module has been refactored to use the R4 (currently maintained)
|
||||||
|
|
@ -41,7 +58,7 @@
|
||||||
</ul>
|
</ul>
|
||||||
]]>
|
]]>
|
||||||
</action>
|
</action>
|
||||||
<action tyoe="add" issue="871">
|
<action type="add" issue="871">
|
||||||
A number of HAPI FHIR modules have been converted so that they now work
|
A number of HAPI FHIR modules have been converted so that they now work
|
||||||
as OSGi modules. Unlike the previous OSGi module, which was a mega-JAR
|
as OSGi modules. Unlike the previous OSGi module, which was a mega-JAR
|
||||||
with all of HAPI FHIR in it, this is simply the appropriate
|
with all of HAPI FHIR in it, this is simply the appropriate
|
||||||
|
|
|
||||||
|
|
@ -69,6 +69,62 @@
|
||||||
</section>
|
</section>
|
||||||
|
|
||||||
<section name="Announcements">
|
<section name="Announcements">
|
||||||
|
<p>
|
||||||
|
<b>Mar 29, 2018 - HAPI FHIR 3.3.0 Released</b> -
|
||||||
|
The next release of HAPI has now been uploaded to the Maven repos and
|
||||||
|
GitHub's releases section.
|
||||||
|
</p>
|
||||||
|
<p>
|
||||||
|
This release brings logs of fixes and some significant enhancements.See the
|
||||||
|
<a href="http://hapifhir.io/changes-report.html">changelog</a> for a full list
|
||||||
|
of changes. Notable changes include:
|
||||||
|
</p>
|
||||||
|
|
||||||
|
<ul>
|
||||||
|
<li>
|
||||||
|
A schema change to the JPA server has been made which will result in
|
||||||
|
significantly less storage space being used and better write performance
|
||||||
|
for repositories which contain a large number of resource, or larger
|
||||||
|
resource bodies. Prior to this change, resource bodies were stored in
|
||||||
|
duplicate in two places in the database and this has now been corrected.
|
||||||
|
<br/><br/>
|
||||||
|
Note that a database migration script must be run for this upgrade, see
|
||||||
|
the changelog for details.
|
||||||
|
</li>
|
||||||
|
<li>
|
||||||
|
The validator has been refactored to use a single codebase across DSTU3/R4
|
||||||
|
validation which means that any fixes and enhancements will now affect both.
|
||||||
|
This makes the DSTU3 validator much more complete in terms of support for
|
||||||
|
advanced validation as well.
|
||||||
|
</li>
|
||||||
|
<li>
|
||||||
|
Several significant features were contributed by the community, including
|
||||||
|
native OSGi support (several HAPI FHIR JARs now have OSGi metadata included)
|
||||||
|
as well as initial experimental support for ElasticSearch instead of
|
||||||
|
Raw Lucene for the JPA server.
|
||||||
|
</li>
|
||||||
|
<li>
|
||||||
|
Several enhancements and bugfixes have been made to the interceptor
|
||||||
|
framework.
|
||||||
|
</li>
|
||||||
|
<li>
|
||||||
|
Many other bugfixes and enhancements have been made as well
|
||||||
|
</li>
|
||||||
|
</ul>
|
||||||
|
<p>
|
||||||
|
Note also that we are hiring! If you have an interest in helping us develop
|
||||||
|
HAPI FHIR or work on implementation projects, please
|
||||||
|
<a href="mailto:jamesagnew@gmail.com">get in touch</a>!
|
||||||
|
</p>
|
||||||
|
<p>
|
||||||
|
Thanks to everyone who contributed to this release! The HAPI FHIR community
|
||||||
|
continues to get bigger and bigger. Together we are transforming healthcare.
|
||||||
|
</p>
|
||||||
|
<p>
|
||||||
|
- <a href="https://github.com/jamesagnew/">James Agnew</a>
|
||||||
|
</p>
|
||||||
|
|
||||||
|
<br/><br/>
|
||||||
<p>
|
<p>
|
||||||
<b>Jan 13, 2018 - HAPI FHIR 3.2.0 Released</b> -
|
<b>Jan 13, 2018 - HAPI FHIR 3.2.0 Released</b> -
|
||||||
The next release of HAPI has now been uploaded to the Maven repos and
|
The next release of HAPI has now been uploaded to the Maven repos and
|
||||||
|
|
@ -111,8 +167,9 @@
|
||||||
<p>
|
<p>
|
||||||
- <a href="https://github.com/jamesagnew/">James Agnew</a>
|
- <a href="https://github.com/jamesagnew/">James Agnew</a>
|
||||||
</p>
|
</p>
|
||||||
<br/><br/>
|
|
||||||
|
|
||||||
|
<!--
|
||||||
|
<br/><br/>
|
||||||
<p>
|
<p>
|
||||||
<b>November 23, 2017 - HAPI FHIR 3.1.0 Released</b> -
|
<b>November 23, 2017 - HAPI FHIR 3.1.0 Released</b> -
|
||||||
The next release of HAPI has now been uploaded to the Maven repos and
|
The next release of HAPI has now been uploaded to the Maven repos and
|
||||||
|
|
@ -271,7 +328,6 @@
|
||||||
</p>
|
</p>
|
||||||
<br/><br/>
|
<br/><br/>
|
||||||
|
|
||||||
<!--
|
|
||||||
<p>
|
<p>
|
||||||
<b>June 8, 2017 - HAPI FHIR 2.5 Released</b> -
|
<b>June 8, 2017 - HAPI FHIR 2.5 Released</b> -
|
||||||
The next release of HAPI has now been uploaded to the Maven repos and
|
The next release of HAPI has now been uploaded to the Maven repos and
|
||||||
|
|
|
||||||
Loading…
Reference in New Issue