More work on perf improvements
This commit is contained in:
parent
08e5681d8b
commit
90a4e2def2
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@ -1,5 +1,7 @@
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package ca.uhn.fhir.rest.api;
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package ca.uhn.fhir.rest.api;
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import java.io.Serializable;
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/*
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/*
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* #%L
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* #%L
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* HAPI FHIR - Core Library
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* HAPI FHIR - Core Library
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@ -24,8 +26,10 @@ package ca.uhn.fhir.rest.api;
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* Represents values for <a href="http://hl7.org/implement/standards/fhir/search.html#sort">sorting</a> resources
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* Represents values for <a href="http://hl7.org/implement/standards/fhir/search.html#sort">sorting</a> resources
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* returned by a server.
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* returned by a server.
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*/
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*/
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public class SortSpec {
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public class SortSpec implements Serializable {
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private static final long serialVersionUID = 2866833099879713467L;
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private SortSpec myChain;
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private SortSpec myChain;
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private String myParamName;
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private String myParamName;
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private SortOrderEnum myOrder;
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private SortOrderEnum myOrder;
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@ -128,11 +128,11 @@ public class SearchBuilder {
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RuntimeSearchParam left = theParamDef.getCompositeOf().get(0);
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RuntimeSearchParam left = theParamDef.getCompositeOf().get(0);
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IQueryParameterType leftValue = cp.getLeftValue();
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IQueryParameterType leftValue = cp.getLeftValue();
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myPredicates.add(createCompositeParamPart(myBuilder, myResourceTableRoot, left, leftValue));
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myPredicates.add(createCompositeParamPart(myResourceTableRoot, left, leftValue));
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RuntimeSearchParam right = theParamDef.getCompositeOf().get(1);
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RuntimeSearchParam right = theParamDef.getCompositeOf().get(1);
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IQueryParameterType rightValue = cp.getRightValue();
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IQueryParameterType rightValue = cp.getRightValue();
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myPredicates.add(createCompositeParamPart(myBuilder, myResourceTableRoot, right, rightValue));
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myPredicates.add(createCompositeParamPart(myResourceTableRoot, right, rightValue));
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}
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}
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@ -148,7 +148,7 @@ public class SearchBuilder {
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List<Predicate> codePredicates = new ArrayList<Predicate>();
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List<Predicate> codePredicates = new ArrayList<Predicate>();
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for (IQueryParameterType nextOr : theList) {
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for (IQueryParameterType nextOr : theList) {
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IQueryParameterType params = nextOr;
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IQueryParameterType params = nextOr;
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Predicate p = createPredicateDate(myBuilder, join, params);
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Predicate p = createPredicateDate(params, theParamName, myBuilder, join);
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codePredicates.add(p);
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codePredicates.add(p);
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}
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}
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@ -288,7 +288,7 @@ public class SearchBuilder {
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String invalidMessageName = "invalidNumberPrefix";
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String invalidMessageName = "invalidNumberPrefix";
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String valueAsString = param.getValue().toPlainString();
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String valueAsString = param.getValue().toPlainString();
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Predicate num = createPredicateNumeric(myBuilder, params, prefix, value, fromObj, invalidMessageName, valueAsString);
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Predicate num = createPredicateNumeric(theParamName, join, myBuilder, params, prefix, value, fromObj, invalidMessageName, valueAsString);
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codePredicates.add(num);
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codePredicates.add(num);
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} else {
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} else {
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@ -320,7 +320,7 @@ public class SearchBuilder {
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List<Predicate> codePredicates = new ArrayList<Predicate>();
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List<Predicate> codePredicates = new ArrayList<Predicate>();
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for (IQueryParameterType nextOr : theList) {
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for (IQueryParameterType nextOr : theList) {
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Predicate singleCode = createPredicateQuantity(myBuilder, join, nextOr);
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Predicate singleCode = createPredicateQuantity(nextOr, theParamName, myBuilder, join);
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codePredicates.add(singleCode);
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codePredicates.add(singleCode);
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}
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}
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@ -679,10 +679,6 @@ public class SearchBuilder {
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}
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}
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Predicate singleCode = createPredicateToken(nextOr, theParamName, myBuilder, join);
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Predicate singleCode = createPredicateToken(nextOr, theParamName, myBuilder, join);
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if (singleCode == null) {
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doSetPids(new ArrayList<Long>());
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return;
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}
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codePredicates.add(singleCode);
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codePredicates.add(singleCode);
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}
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}
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@ -691,10 +687,7 @@ public class SearchBuilder {
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}
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}
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Predicate spPredicate = myBuilder.or(toArray(codePredicates));
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Predicate spPredicate = myBuilder.or(toArray(codePredicates));
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myPredicates.add(spPredicate);
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Predicate paramNamePredicate = myBuilder.equal(join.get("myParamName"), theParamName);
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Predicate outerPredicate = myBuilder.and(paramNamePredicate, spPredicate);
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myPredicates.add(outerPredicate);
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}
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}
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private void addPredicateUri(String theParamName, List<? extends IQueryParameterType> theList) {
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private void addPredicateUri(String theParamName, List<? extends IQueryParameterType> theList) {
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@ -777,27 +770,27 @@ public class SearchBuilder {
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myPredicates.add(outerPredicate);
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myPredicates.add(outerPredicate);
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}
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}
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private Predicate createCompositeParamPart(CriteriaBuilder builder, Root<ResourceTable> from, RuntimeSearchParam left, IQueryParameterType leftValue) {
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private Predicate createCompositeParamPart(Root<ResourceTable> theRoot, RuntimeSearchParam theParam, IQueryParameterType leftValue) {
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Predicate retVal = null;
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Predicate retVal = null;
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switch (left.getParamType()) {
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switch (theParam.getParamType()) {
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case STRING: {
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case STRING: {
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From<ResourceIndexedSearchParamString, ResourceIndexedSearchParamString> stringJoin = from.join("myParamsString", JoinType.INNER);
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From<ResourceIndexedSearchParamString, ResourceIndexedSearchParamString> stringJoin = theRoot.join("myParamsString", JoinType.INNER);
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retVal = createPredicateString(leftValue, left.getName(), builder, stringJoin);
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retVal = createPredicateString(leftValue, theParam.getName(), myBuilder, stringJoin);
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break;
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break;
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}
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}
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case TOKEN: {
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case TOKEN: {
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From<ResourceIndexedSearchParamToken, ResourceIndexedSearchParamToken> tokenJoin = from.join("myParamsToken", JoinType.INNER);
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From<ResourceIndexedSearchParamToken, ResourceIndexedSearchParamToken> tokenJoin = theRoot.join("myParamsToken", JoinType.INNER);
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retVal = createPredicateToken(leftValue, left.getName(), builder, tokenJoin);
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retVal = createPredicateToken(leftValue, theParam.getName(), myBuilder, tokenJoin);
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break;
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break;
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}
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}
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case DATE: {
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case DATE: {
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From<ResourceIndexedSearchParamDate, ResourceIndexedSearchParamDate> dateJoin = from.join("myParamsDate", JoinType.INNER);
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From<ResourceIndexedSearchParamDate, ResourceIndexedSearchParamDate> dateJoin = theRoot.join("myParamsDate", JoinType.INNER);
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retVal = createPredicateDate(builder, dateJoin, leftValue);
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retVal = createPredicateDate(leftValue, theParam.getName(), myBuilder, dateJoin);
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break;
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break;
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}
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}
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case QUANTITY: {
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case QUANTITY: {
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From<ResourceIndexedSearchParamQuantity, ResourceIndexedSearchParamQuantity> dateJoin = from.join("myParamsQuantity", JoinType.INNER);
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From<ResourceIndexedSearchParamQuantity, ResourceIndexedSearchParamQuantity> dateJoin = theRoot.join("myParamsQuantity", JoinType.INNER);
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retVal = createPredicateQuantity(builder, dateJoin, leftValue);
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retVal = createPredicateQuantity(leftValue, theParam.getName(), myBuilder, dateJoin);
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break;
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break;
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}
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}
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case COMPOSITE:
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case COMPOSITE:
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@ -809,13 +802,13 @@ public class SearchBuilder {
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}
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}
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if (retVal == null) {
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if (retVal == null) {
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throw new InvalidRequestException("Don't know how to handle composite parameter with type of " + left.getParamType());
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throw new InvalidRequestException("Don't know how to handle composite parameter with type of " + theParam.getParamType());
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}
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}
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return retVal;
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return retVal;
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}
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}
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private Predicate createPredicateDate(CriteriaBuilder theBuilder, From<?, ResourceIndexedSearchParamDate> theFrom, IQueryParameterType theParam) {
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private Predicate createPredicateDate(IQueryParameterType theParam, String theParamName, CriteriaBuilder theBuilder, From<?, ResourceIndexedSearchParamDate> theFrom) {
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Predicate p;
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Predicate p;
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if (theParam instanceof DateParam) {
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if (theParam instanceof DateParam) {
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DateParam date = (DateParam) theParam;
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DateParam date = (DateParam) theParam;
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@ -832,7 +825,8 @@ public class SearchBuilder {
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} else {
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} else {
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throw new IllegalArgumentException("Invalid token type: " + theParam.getClass());
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throw new IllegalArgumentException("Invalid token type: " + theParam.getClass());
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}
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}
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return p;
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return combineParamIndexPredicateWithParamNamePredicate(theParamName, theFrom, p);
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}
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}
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private Predicate createPredicateDateFromRange(CriteriaBuilder theBuilder, From<?, ResourceIndexedSearchParamDate> theFrom, DateRangeParam theRange) {
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private Predicate createPredicateDateFromRange(CriteriaBuilder theBuilder, From<?, ResourceIndexedSearchParamDate> theFrom, DateRangeParam theRange) {
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@ -892,50 +886,54 @@ public class SearchBuilder {
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predicates.addAll(createLastUpdatedPredicates(myParams.getLastUpdatedAndRemove(), builder, from));
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predicates.addAll(createLastUpdatedPredicates(myParams.getLastUpdatedAndRemove(), builder, from));
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}
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}
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private Predicate createPredicateNumeric(CriteriaBuilder builder, IQueryParameterType params, ParamPrefixEnum cmpValue, BigDecimal valueValue, final Expression<BigDecimal> path,
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private Predicate createPredicateNumeric(String theParamName, From<?, ? extends BaseResourceIndexedSearchParam> theFrom, CriteriaBuilder builder, IQueryParameterType theParam, ParamPrefixEnum thePrefix, BigDecimal theValue, final Expression<BigDecimal> thePath,
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String invalidMessageName, String theValueString) {
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String invalidMessageName, String theValueString) {
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Predicate num;
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Predicate num;
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switch (cmpValue) {
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switch (thePrefix) {
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case GREATERTHAN:
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case GREATERTHAN:
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num = builder.gt(path, valueValue);
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num = builder.gt(thePath, theValue);
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break;
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break;
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case GREATERTHAN_OR_EQUALS:
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case GREATERTHAN_OR_EQUALS:
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num = builder.ge(path, valueValue);
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num = builder.ge(thePath, theValue);
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break;
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break;
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case LESSTHAN:
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case LESSTHAN:
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num = builder.lt(path, valueValue);
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num = builder.lt(thePath, theValue);
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break;
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break;
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case LESSTHAN_OR_EQUALS:
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case LESSTHAN_OR_EQUALS:
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num = builder.le(path, valueValue);
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num = builder.le(thePath, theValue);
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break;
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break;
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case APPROXIMATE:
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case APPROXIMATE:
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case EQUAL:
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case EQUAL:
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case NOT_EQUAL:
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case NOT_EQUAL:
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BigDecimal mul = calculateFuzzAmount(cmpValue, valueValue);
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BigDecimal mul = calculateFuzzAmount(thePrefix, theValue);
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BigDecimal low = valueValue.subtract(mul, MathContext.DECIMAL64);
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BigDecimal low = theValue.subtract(mul, MathContext.DECIMAL64);
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BigDecimal high = valueValue.add(mul, MathContext.DECIMAL64);
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BigDecimal high = theValue.add(mul, MathContext.DECIMAL64);
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Predicate lowPred;
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Predicate lowPred;
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Predicate highPred;
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Predicate highPred;
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if (cmpValue != ParamPrefixEnum.NOT_EQUAL) {
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if (thePrefix != ParamPrefixEnum.NOT_EQUAL) {
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lowPred = builder.ge(path.as(BigDecimal.class), low);
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lowPred = builder.ge(thePath.as(BigDecimal.class), low);
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highPred = builder.le(path.as(BigDecimal.class), high);
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highPred = builder.le(thePath.as(BigDecimal.class), high);
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num = builder.and(lowPred, highPred);
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num = builder.and(lowPred, highPred);
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ourLog.trace("Searching for {} <= val <= {}", low, high);
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ourLog.trace("Searching for {} <= val <= {}", low, high);
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} else {
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} else {
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// Prefix was "ne", so reverse it!
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// Prefix was "ne", so reverse it!
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lowPred = builder.lt(path.as(BigDecimal.class), low);
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lowPred = builder.lt(thePath.as(BigDecimal.class), low);
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highPred = builder.gt(path.as(BigDecimal.class), high);
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highPred = builder.gt(thePath.as(BigDecimal.class), high);
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num = builder.or(lowPred, highPred);
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num = builder.or(lowPred, highPred);
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}
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}
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break;
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break;
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default:
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default:
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String msg = myContext.getLocalizer().getMessage(SearchBuilder.class, invalidMessageName, cmpValue.getValue(), params.getValueAsQueryToken(myContext));
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String msg = myContext.getLocalizer().getMessage(SearchBuilder.class, invalidMessageName, thePrefix.getValue(), theParam.getValueAsQueryToken(myContext));
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throw new InvalidRequestException(msg);
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throw new InvalidRequestException(msg);
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}
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}
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return num;
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if (theParamName == null) {
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return num;
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}
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return combineParamIndexPredicateWithParamNamePredicate(theParamName, theFrom, num);
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}
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}
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private Predicate createPredicateQuantity(CriteriaBuilder theBuilder, From<?, ResourceIndexedSearchParamQuantity> theFrom, IQueryParameterType theParam) {
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private Predicate createPredicateQuantity(IQueryParameterType theParam, String theParamName, CriteriaBuilder theBuilder, From<?, ResourceIndexedSearchParamQuantity> theFrom) {
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String systemValue;
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String systemValue;
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String unitsValue;
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String unitsValue;
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ParamPrefixEnum cmpValue;
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ParamPrefixEnum cmpValue;
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@ -974,7 +972,7 @@ public class SearchBuilder {
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final Expression<BigDecimal> path = theFrom.get("myValue");
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final Expression<BigDecimal> path = theFrom.get("myValue");
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String invalidMessageName = "invalidQuantityPrefix";
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String invalidMessageName = "invalidQuantityPrefix";
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Predicate num = createPredicateNumeric(theBuilder, theParam, cmpValue, valueValue, path, invalidMessageName, valueString);
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Predicate num = createPredicateNumeric(null, theFrom, theBuilder, theParam, cmpValue, valueValue, path, invalidMessageName, valueString);
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Predicate singleCode;
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Predicate singleCode;
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if (system == null && code == null) {
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if (system == null && code == null) {
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@ -987,7 +985,7 @@ public class SearchBuilder {
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singleCode = theBuilder.and(system, code, num);
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singleCode = theBuilder.and(system, code, num);
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}
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}
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return singleCode;
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return combineParamIndexPredicateWithParamNamePredicate(theParamName, theFrom, singleCode);
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}
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}
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private void createPredicateResourceId(CriteriaBuilder builder, AbstractQuery<?> cq, List<Predicate> thePredicates, Expression<Long> theExpression) {
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private void createPredicateResourceId(CriteriaBuilder builder, AbstractQuery<?> cq, List<Predicate> thePredicates, Expression<Long> theExpression) {
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singleCode = theBuilder.and(singleCode, exactCode);
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singleCode = theBuilder.and(singleCode, exactCode);
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}
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}
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return combineParamIndexPredicateWithParamNamePredicate(theParamName, theFrom, singleCode);
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}
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private Predicate combineParamIndexPredicateWithParamNamePredicate(String theParamName, From<?, ? extends BaseResourceIndexedSearchParam> theFrom, Predicate thePredicate) {
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Predicate resourceTypePredicate = myBuilder.equal(theFrom.get("myResourceType"), myResourceName);
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Predicate paramNamePredicate = myBuilder.equal(theFrom.get("myParamName"), theParamName);
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Predicate paramNamePredicate = myBuilder.equal(theFrom.get("myParamName"), theParamName);
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Predicate outerPredicate = myBuilder.and(paramNamePredicate, singleCode);
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Predicate outerPredicate = myBuilder.and(resourceTypePredicate, paramNamePredicate, thePredicate);
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return outerPredicate;
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return outerPredicate;
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}
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}
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@ -1103,25 +1106,33 @@ public class SearchBuilder {
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codes = myTerminologySvc.findCodesBelow(system, code);
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codes = myTerminologySvc.findCodesBelow(system, code);
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}
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}
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ArrayList<Predicate> singleCodePredicates = (new ArrayList<Predicate>());
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if (codes != null) {
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if (codes != null) {
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if (codes.isEmpty()) {
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if (codes.isEmpty()) {
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return null;
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}
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List<Predicate> orPredicates = new ArrayList<Predicate>();
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for (VersionIndependentConcept nextCode : codes) {
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Predicate systemPredicate = theBuilder.equal(theFrom.get("mySystem"), nextCode.getSystem());
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Predicate codePredicate = theBuilder.equal(theFrom.get("myValue"), nextCode.getCode());
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orPredicates.add(theBuilder.and(systemPredicate, codePredicate));
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}
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return theBuilder.or(orPredicates.toArray(new Predicate[orPredicates.size()]));
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// This will never match anything
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}
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Predicate systemPredicate = theBuilder.isNull(theFrom.get("mySystem"));
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Predicate codePredicate = theBuilder.isNull(theFrom.get("myValue"));
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singleCodePredicates.add(theBuilder.and(systemPredicate, codePredicate));
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} else {
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List<Predicate> orPredicates = new ArrayList<Predicate>();
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for (VersionIndependentConcept nextCode : codes) {
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Predicate systemPredicate = theBuilder.equal(theFrom.get("mySystem"), nextCode.getSystem());
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Predicate codePredicate = theBuilder.equal(theFrom.get("myValue"), nextCode.getCode());
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orPredicates.add(theBuilder.and(systemPredicate, codePredicate));
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}
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singleCodePredicates.add(theBuilder.or(orPredicates.toArray(new Predicate[orPredicates.size()])));
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}
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} else {
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/*
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/*
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* Ok, this is a normal query
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* Ok, this is a normal query
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*/
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*/
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ArrayList<Predicate> singleCodePredicates = (new ArrayList<Predicate>());
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if (StringUtils.isNotBlank(system)) {
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if (StringUtils.isNotBlank(system)) {
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singleCodePredicates.add(theBuilder.equal(theFrom.get("mySystem"), system));
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singleCodePredicates.add(theBuilder.equal(theFrom.get("mySystem"), system));
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} else if (system == null) {
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} else if (system == null) {
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@ -1142,9 +1153,10 @@ public class SearchBuilder {
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*/
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*/
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// singleCodePredicates.add(theBuilder.isNull(theFrom.get("myValue")));
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// singleCodePredicates.add(theBuilder.isNull(theFrom.get("myValue")));
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}
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}
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}
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Predicate singleCode = theBuilder.and(toArray(singleCodePredicates));
|
Predicate singleCode = theBuilder.and(toArray(singleCodePredicates));
|
||||||
return singleCode;
|
return combineParamIndexPredicateWithParamNamePredicate(theParamName, theFrom, singleCode);
|
||||||
}
|
}
|
||||||
|
|
||||||
private Predicate createResourceLinkPathPredicate(String theParamName, From<?, ? extends ResourceLink> from) {
|
private Predicate createResourceLinkPathPredicate(String theParamName, From<?, ? extends ResourceLink> from) {
|
||||||
|
|
|
@ -58,7 +58,7 @@ public class TestDstu3Config extends BaseJavaConfigDstu3 {
|
||||||
private Properties jpaProperties() {
|
private Properties jpaProperties() {
|
||||||
Properties extraProperties = new Properties();
|
Properties extraProperties = new Properties();
|
||||||
extraProperties.put("hibernate.jdbc.batch_size", "50");
|
extraProperties.put("hibernate.jdbc.batch_size", "50");
|
||||||
extraProperties.put("hibernate.format_sql", "false");
|
extraProperties.put("hibernate.format_sql", "true");
|
||||||
extraProperties.put("hibernate.show_sql", "false");
|
extraProperties.put("hibernate.show_sql", "false");
|
||||||
extraProperties.put("hibernate.hbm2ddl.auto", "update");
|
extraProperties.put("hibernate.hbm2ddl.auto", "update");
|
||||||
extraProperties.put("hibernate.dialect", "org.hibernate.dialect.DerbyTenSevenDialect");
|
extraProperties.put("hibernate.dialect", "org.hibernate.dialect.DerbyTenSevenDialect");
|
||||||
|
|
|
@ -114,6 +114,9 @@ public abstract class BaseJpaDstu3Test extends BaseJpaTest {
|
||||||
@Autowired
|
@Autowired
|
||||||
@Qualifier("myImmunizationDaoDstu3")
|
@Qualifier("myImmunizationDaoDstu3")
|
||||||
protected IFhirResourceDao<Immunization> myImmunizationDao;
|
protected IFhirResourceDao<Immunization> myImmunizationDao;
|
||||||
|
@Autowired
|
||||||
|
@Qualifier("myImmunizationRecommendationDaoDstu3")
|
||||||
|
protected IFhirResourceDao<ImmunizationRecommendation> myImmunizationRecommendationDao;
|
||||||
protected IServerInterceptor myInterceptor;
|
protected IServerInterceptor myInterceptor;
|
||||||
@Autowired
|
@Autowired
|
||||||
private JpaValidationSupportChainDstu3 myJpaValidationSupportChainDstu3;
|
private JpaValidationSupportChainDstu3 myJpaValidationSupportChainDstu3;
|
||||||
|
|
|
@ -31,6 +31,7 @@ import org.hl7.fhir.dstu3.model.ContactPoint.ContactPointSystem;
|
||||||
import org.hl7.fhir.dstu3.model.Enumerations.AdministrativeGender;
|
import org.hl7.fhir.dstu3.model.Enumerations.AdministrativeGender;
|
||||||
import org.hl7.fhir.dstu3.model.Subscription.SubscriptionChannelType;
|
import org.hl7.fhir.dstu3.model.Subscription.SubscriptionChannelType;
|
||||||
import org.hl7.fhir.dstu3.model.Subscription.SubscriptionStatus;
|
import org.hl7.fhir.dstu3.model.Subscription.SubscriptionStatus;
|
||||||
|
import org.hl7.fhir.exceptions.FHIRException;
|
||||||
import org.hl7.fhir.instance.model.api.IAnyResource;
|
import org.hl7.fhir.instance.model.api.IAnyResource;
|
||||||
import org.hl7.fhir.instance.model.api.IBaseResource;
|
import org.hl7.fhir.instance.model.api.IBaseResource;
|
||||||
import org.hl7.fhir.instance.model.api.IIdType;
|
import org.hl7.fhir.instance.model.api.IIdType;
|
||||||
|
@ -636,6 +637,10 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
map.put(Subscription.SP_TYPE, new TokenParam(null, SubscriptionChannelType.WEBSOCKET.toCode()));
|
map.put(Subscription.SP_TYPE, new TokenParam(null, SubscriptionChannelType.WEBSOCKET.toCode()));
|
||||||
map.put(Subscription.SP_STATUS, new TokenParam(null, SubscriptionStatus.ACTIVE.toCode() + "2"));
|
map.put(Subscription.SP_STATUS, new TokenParam(null, SubscriptionStatus.ACTIVE.toCode() + "2"));
|
||||||
assertThat(toUnqualifiedVersionlessIds(mySubscriptionDao.search(map)), empty());
|
assertThat(toUnqualifiedVersionlessIds(mySubscriptionDao.search(map)), empty());
|
||||||
|
|
||||||
|
// Wrong param
|
||||||
|
map.put(Subscription.SP_STATUS, new TokenParam(null, SubscriptionChannelType.WEBSOCKET.toCode()));
|
||||||
|
assertThat(toUnqualifiedVersionlessIds(mySubscriptionDao.search(map)), empty());
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
|
@ -733,8 +738,7 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
IIdType id2 = myObservationDao.create(o2, mySrd).getId().toUnqualifiedVersionless();
|
IIdType id2 = myObservationDao.create(o2, mySrd).getId().toUnqualifiedVersionless();
|
||||||
//@formatter:on
|
//@formatter:on
|
||||||
|
|
||||||
// Was Observation.SP_COMPONENT_CODE_VALUE_QUANTITY
|
String param = Observation.SP_COMPONENT_CODE_VALUE_QUANTITY;
|
||||||
String param = Observation.SP_CODE_VALUE_QUANTITY;
|
|
||||||
|
|
||||||
{
|
{
|
||||||
TokenParam v0 = new TokenParam("http://foo", "code1");
|
TokenParam v0 = new TokenParam("http://foo", "code1");
|
||||||
|
@ -766,6 +770,29 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchDateWrongParam() {
|
||||||
|
Patient p1 = new Patient();
|
||||||
|
p1.getBirthDateElement().setValueAsString("1980-01-01");
|
||||||
|
String id1 = myPatientDao.create(p1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
Patient p2 = new Patient();
|
||||||
|
p2.setDeceased(new DateTimeType("1980-01-01"));
|
||||||
|
String id2 = myPatientDao.create(p2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_BIRTHDATE, new DateParam("1980-01-01"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id1));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_DEATH_DATE, new DateParam("1980-01-01"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id2));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
/**
|
/**
|
||||||
* #222
|
* #222
|
||||||
*/
|
*/
|
||||||
|
@ -1170,6 +1197,54 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchNumberWrongParam() {
|
||||||
|
ImmunizationRecommendation ir1 = new ImmunizationRecommendation();
|
||||||
|
ir1.addRecommendation().setDoseNumber(1);
|
||||||
|
String id1 = myImmunizationRecommendationDao.create(ir1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
ImmunizationRecommendation ir2 = new ImmunizationRecommendation();
|
||||||
|
ir2.addRecommendation().setDoseNumber(2);
|
||||||
|
String id2 = myImmunizationRecommendationDao.create(ir2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myImmunizationRecommendationDao.search(ImmunizationRecommendation.SP_DOSE_NUMBER, new NumberParam("1"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id1));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
IBundleProvider found = myImmunizationRecommendationDao.search(ImmunizationRecommendation.SP_DOSE_SEQUENCE, new NumberParam("1"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), empty());
|
||||||
|
assertEquals(0, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
|
/**
|
||||||
|
* When a valueset expansion returns no codes
|
||||||
|
*/
|
||||||
|
@Test
|
||||||
|
public void testSearchOnCodesWithNone() {
|
||||||
|
ValueSet vs = new ValueSet();
|
||||||
|
vs.setUrl("urn:testSearchOnCodesWithNone");
|
||||||
|
myValueSetDao.create(vs);
|
||||||
|
|
||||||
|
Patient p1 = new Patient();
|
||||||
|
p1.setGender(AdministrativeGender.MALE);
|
||||||
|
String id1 = myPatientDao.create(p1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
Patient p2 = new Patient();
|
||||||
|
p2.setGender(AdministrativeGender.FEMALE);
|
||||||
|
String id2 = myPatientDao.create(p2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_GENDER, new TokenParam().setModifier(TokenParamModifier.IN).setValue("urn:testSearchOnCodesWithNone"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), empty());
|
||||||
|
assertEquals(0, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testSearchPagesExpiry() throws Exception {
|
public void testSearchPagesExpiry() throws Exception {
|
||||||
IIdType pid1;
|
IIdType pid1;
|
||||||
|
@ -1310,6 +1385,29 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchQuantityWrongParam() throws Exception {
|
||||||
|
Condition c1 = new Condition();
|
||||||
|
c1.setAbatement(new Range().setLow((SimpleQuantity) new SimpleQuantity().setValue(1L)).setHigh((SimpleQuantity) new SimpleQuantity().setValue(1L)));
|
||||||
|
String id1 = myConditionDao.create(c1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
Condition c2 = new Condition();
|
||||||
|
c2.setOnset(new Range().setLow((SimpleQuantity) new SimpleQuantity().setValue(1L)).setHigh((SimpleQuantity) new SimpleQuantity().setValue(1L)));
|
||||||
|
String id2 = myConditionDao.create(c2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myConditionDao.search(Condition.SP_ABATEMENT_AGE, new QuantityParam("1"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id1));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
IBundleProvider found = myConditionDao.search(Condition.SP_ONSET_AGE, new QuantityParam("1"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id2));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testSearchResourceLinkWithChain() {
|
public void testSearchResourceLinkWithChain() {
|
||||||
Patient patient = new Patient();
|
Patient patient = new Patient();
|
||||||
|
@ -1610,6 +1708,29 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchStringWrongParam() throws Exception {
|
||||||
|
Patient p1 = new Patient();
|
||||||
|
p1.getNameFirstRep().setFamily("AAA");
|
||||||
|
String id1 = myPatientDao.create(p1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
Patient p2 = new Patient();
|
||||||
|
p2.getNameFirstRep().addGiven("AAA");
|
||||||
|
String id2 = myPatientDao.create(p2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_FAMILY, new StringParam("AAA"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id1));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_GIVEN, new StringParam("AAA"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id2));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testSearchTokenParam() {
|
public void testSearchTokenParam() {
|
||||||
Patient patient = new Patient();
|
Patient patient = new Patient();
|
||||||
|
@ -1717,6 +1838,29 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchTokenWrongParam() throws Exception {
|
||||||
|
Patient p1 = new Patient();
|
||||||
|
p1.setGender(AdministrativeGender.MALE);
|
||||||
|
String id1 = myPatientDao.create(p1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
Patient p2 = new Patient();
|
||||||
|
p2.addIdentifier().setValue(AdministrativeGender.MALE.toCode());
|
||||||
|
String id2 = myPatientDao.create(p2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_GENDER, new TokenParam(null, "male"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id1));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
IBundleProvider found = myPatientDao.search(Patient.SP_IDENTIFIER, new TokenParam(null, "male"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id2));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
@Ignore
|
@Ignore
|
||||||
public void testSearchUnknownContentParam() {
|
public void testSearchUnknownContentParam() {
|
||||||
|
@ -1743,6 +1887,29 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchUriWrongParam() throws Exception {
|
||||||
|
ValueSet v1 = new ValueSet();
|
||||||
|
v1.getUrlElement().setValue("http://foo");
|
||||||
|
String id1 = myValueSetDao.create(v1).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
ValueSet v2 = new ValueSet();
|
||||||
|
v2.getExpansion().getIdentifierElement().setValue("http://foo");
|
||||||
|
String id2 = myValueSetDao.create(v2).getId().toUnqualifiedVersionless().getValue();
|
||||||
|
|
||||||
|
{
|
||||||
|
IBundleProvider found = myValueSetDao.search(ValueSet.SP_URL, new UriParam("http://foo"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id1));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
IBundleProvider found = myValueSetDao.search(ValueSet.SP_EXPANSION, new UriParam("http://foo"));
|
||||||
|
assertThat(toUnqualifiedVersionlessIdValues(found), containsInAnyOrder(id2));
|
||||||
|
assertEquals(1, found.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testSearchValueQuantity() {
|
public void testSearchValueQuantity() {
|
||||||
String methodName = "testSearchValueQuantity";
|
String methodName = "testSearchValueQuantity";
|
||||||
|
@ -1796,6 +1963,50 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Test
|
||||||
|
public void testSearchWithDate() {
|
||||||
|
IIdType orgId = myOrganizationDao.create(new Organization(), mySrd).getId();
|
||||||
|
IIdType id2;
|
||||||
|
IIdType id1;
|
||||||
|
{
|
||||||
|
Patient patient = new Patient();
|
||||||
|
patient.addIdentifier().setSystem("urn:system").setValue("001");
|
||||||
|
id1 = myPatientDao.create(patient, mySrd).getId().toUnqualifiedVersionless();
|
||||||
|
}
|
||||||
|
{
|
||||||
|
Patient patient = new Patient();
|
||||||
|
patient.addIdentifier().setSystem("urn:system").setValue("002");
|
||||||
|
patient.addName().setFamily("Tester_testSearchStringParam").addGiven("John");
|
||||||
|
patient.setBirthDateElement(new DateType("2011-01-01"));
|
||||||
|
patient.getManagingOrganization().setReferenceElement(orgId);
|
||||||
|
id2 = myPatientDao.create(patient, mySrd).getId().toUnqualifiedVersionless();
|
||||||
|
}
|
||||||
|
{
|
||||||
|
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
||||||
|
params.put(Patient.SP_BIRTHDATE, new DateParam("2011-01-01"));
|
||||||
|
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
||||||
|
assertThat(patients, contains(id2));
|
||||||
|
}
|
||||||
|
{
|
||||||
|
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
||||||
|
params.put(Patient.SP_BIRTHDATE, new DateParam("2011-01-03"));
|
||||||
|
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
||||||
|
assertThat(patients, empty());
|
||||||
|
}
|
||||||
|
{
|
||||||
|
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
||||||
|
params.put(Patient.SP_BIRTHDATE, new DateParam("2011-01-03").setPrefix(ParamPrefixEnum.LESSTHAN));
|
||||||
|
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
||||||
|
assertThat(patients, contains(id2));
|
||||||
|
}
|
||||||
|
{
|
||||||
|
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
||||||
|
params.put(Patient.SP_BIRTHDATE, new DateParam("2010-01-01").setPrefix(ParamPrefixEnum.LESSTHAN));
|
||||||
|
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
||||||
|
assertThat(patients, empty());
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testSearchWithEmptySort() {
|
public void testSearchWithEmptySort() {
|
||||||
SearchParameterMap criteriaUrl = new SearchParameterMap();
|
SearchParameterMap criteriaUrl = new SearchParameterMap();
|
||||||
|
@ -2169,50 +2380,6 @@ public class FhirResourceDaoDstu3SearchNoFtTest extends BaseJpaDstu3Test {
|
||||||
// }
|
// }
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
|
||||||
public void testSearchWithDate() {
|
|
||||||
IIdType orgId = myOrganizationDao.create(new Organization(), mySrd).getId();
|
|
||||||
IIdType id2;
|
|
||||||
IIdType id1;
|
|
||||||
{
|
|
||||||
Patient patient = new Patient();
|
|
||||||
patient.addIdentifier().setSystem("urn:system").setValue("001");
|
|
||||||
id1 = myPatientDao.create(patient, mySrd).getId().toUnqualifiedVersionless();
|
|
||||||
}
|
|
||||||
{
|
|
||||||
Patient patient = new Patient();
|
|
||||||
patient.addIdentifier().setSystem("urn:system").setValue("002");
|
|
||||||
patient.addName().setFamily("Tester_testSearchStringParam").addGiven("John");
|
|
||||||
patient.setBirthDateElement(new DateType("2011-01-01"));
|
|
||||||
patient.getManagingOrganization().setReferenceElement(orgId);
|
|
||||||
id2 = myPatientDao.create(patient, mySrd).getId().toUnqualifiedVersionless();
|
|
||||||
}
|
|
||||||
{
|
|
||||||
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
|
||||||
params.put(Patient.SP_BIRTHDATE, new DateParam("2011-01-01"));
|
|
||||||
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
|
||||||
assertThat(patients, contains(id2));
|
|
||||||
}
|
|
||||||
{
|
|
||||||
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
|
||||||
params.put(Patient.SP_BIRTHDATE, new DateParam("2011-01-03"));
|
|
||||||
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
|
||||||
assertThat(patients, empty());
|
|
||||||
}
|
|
||||||
{
|
|
||||||
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
|
||||||
params.put(Patient.SP_BIRTHDATE, new DateParam("2011-01-03").setPrefix(ParamPrefixEnum.LESSTHAN));
|
|
||||||
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
|
||||||
assertThat(patients, contains(id2));
|
|
||||||
}
|
|
||||||
{
|
|
||||||
HashMap<String, IQueryParameterType> params = new HashMap<String, IQueryParameterType>();
|
|
||||||
params.put(Patient.SP_BIRTHDATE, new DateParam("2010-01-01").setPrefix(ParamPrefixEnum.LESSTHAN));
|
|
||||||
List<IIdType> patients = toUnqualifiedVersionlessIds(myPatientDao.search(params));
|
|
||||||
assertThat(patients, empty());
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testSearchWithMissingQuantity() {
|
public void testSearchWithMissingQuantity() {
|
||||||
IIdType notMissing;
|
IIdType notMissing;
|
||||||
|
|
|
@ -34,11 +34,11 @@
|
||||||
</logger>
|
</logger>
|
||||||
|
|
||||||
<!-- Set to 'trace' to enable SQL logging -->
|
<!-- Set to 'trace' to enable SQL logging -->
|
||||||
<logger name="org.hibernate.SQL" additivity="false" level="info">
|
<logger name="org.hibernate.SQL" additivity="false" level="trace">
|
||||||
<appender-ref ref="STDOUT" />
|
<appender-ref ref="STDOUT" />
|
||||||
</logger>
|
</logger>
|
||||||
<!-- Set to 'trace' to enable SQL Value logging -->
|
<!-- Set to 'trace' to enable SQL Value logging -->
|
||||||
<logger name="org.hibernate.type" additivity="false" level="info">
|
<logger name="org.hibernate.type" additivity="false" level="trace">
|
||||||
<appender-ref ref="STDOUT" />
|
<appender-ref ref="STDOUT" />
|
||||||
</logger>
|
</logger>
|
||||||
|
|
||||||
|
|
Loading…
Reference in New Issue