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hapi-fhir
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Fix issue in calling JPA server transactions programmatically where 

resources
            are linked by object reference and not by ID where indexes
				were not correctly
				            generated. This should not affect most users.
This commit is contained in:
James Agnew 2017-06-27 21:12:20 -04:00
parent 79378772b7
commit a0004c9166
4 changed files with 81 additions and 7 deletions
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10
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/BaseHapiFhirDao.java
View File

@ -334,6 +334,16 @@ public abstract class BaseHapiFhirDao<T extends IBaseResource> implements IDao {
continue;
}
nextId = nextValue.getReferenceElement();
/*
* This can only really happen if the DAO is being called
* programatically with a Bundle (not through the FHIR REST API)
* but Smile does this
*/
if (nextId.isEmpty() && nextValue.getResource() != null) {
nextId = nextValue.getResource().getIdElement();
}
if (nextId.isEmpty() || nextId.getValue().startsWith("#")) {
// This is a blank or contained resource reference
continue;

19
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/BaseHapiFhirResourceDao.java
View File

@ -273,19 +273,24 @@ public abstract class BaseHapiFhirResourceDao<T extends IBaseResource> extends B
// Notify interceptors
IdDt idToDelete = entity.getIdDt();
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, idToDelete.getResourceType(), idToDelete);
notifyInterceptors(RestOperationTypeEnum.DELETE, requestDetails);
if (theRequestDetails != null) {
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, idToDelete.getResourceType(), idToDelete);
notifyInterceptors(RestOperationTypeEnum.DELETE, requestDetails);
}
// Perform delete
Date updateTime = new Date();
updateEntity(null, entity, updateTime, updateTime);
// Notify JPA interceptors
T resourceToDelete = toResource(myResourceType, entity, false);
theRequestDetails.getRequestOperationCallback().resourceDeleted(resourceToDelete);
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IJpaServerInterceptor) {
((IJpaServerInterceptor) next).resourceDeleted(requestDetails, entity);
if (theRequestDetails != null) {
theRequestDetails.getRequestOperationCallback().resourceDeleted(resourceToDelete);
ActionRequestDetails requestDetails = new ActionRequestDetails(theRequestDetails, idToDelete.getResourceType(), idToDelete);
for (IServerInterceptor next : getConfig().getInterceptors()) {
if (next instanceof IJpaServerInterceptor) {
((IJpaServerInterceptor) next).resourceDeleted(requestDetails, entity);
}
}
}
for (IServerInterceptor next : getConfig().getInterceptors()) {

54
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu3/FhirSystemDaoDstu3Test.java
View File

@ -542,6 +542,60 @@ public class FhirSystemDaoDstu3Test extends BaseJpaDstu3SystemTest {
}
}
@Test
public void testTransactionWithReferenceUuid() {
Bundle request = new Bundle();
Patient p = new Patient();
p.setActive(true);
p.setId(IdType.newRandomUuid());
request.addEntry().setResource(p).getRequest().setMethod(HTTPVerb.POST).setUrl(p.getId());
Observation o = new Observation();
o.getCode().setText("Some Observation");
o.getSubject().setReference(p.getId());
request.addEntry().setResource(o).getRequest().setMethod(HTTPVerb.POST);
Bundle resp = mySystemDao.transaction(mySrd, request);
ourLog.info(myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resp));
String patientId = new IdType(resp.getEntry().get(0).getResponse().getLocation()).toUnqualifiedVersionless().getValue();
assertThat(patientId, startsWith("Patient/"));
SearchParameterMap params = new SearchParameterMap();
params.setLoadSynchronous(true);
params.add("subject", new ReferenceParam(patientId));
IBundleProvider found = myObservationDao.search(params);
assertEquals(1, found.size().intValue());
}
@Test
public void testTransactionWithReferenceResource() {
Bundle request = new Bundle();
Patient p = new Patient();
p.setActive(true);
p.setId(IdType.newRandomUuid());
request.addEntry().setResource(p).getRequest().setMethod(HTTPVerb.POST).setUrl(p.getId());
Observation o = new Observation();
o.getCode().setText("Some Observation");
o.getSubject().setResource(p);
request.addEntry().setResource(o).getRequest().setMethod(HTTPVerb.POST);
Bundle resp = mySystemDao.transaction(mySrd, request);
ourLog.info(myFhirCtx.newXmlParser().setPrettyPrint(true).encodeResourceToString(resp));
String patientId = new IdType(resp.getEntry().get(0).getResponse().getLocation()).toUnqualifiedVersionless().getValue();
assertThat(patientId, startsWith("Patient/"));
SearchParameterMap params = new SearchParameterMap();
params.setLoadSynchronous(true);
params.add("subject", new ReferenceParam(patientId));
IBundleProvider found = myObservationDao.search(params);
assertEquals(1, found.size().intValue());
}
@Test
public void testTransactionCreateInlineMatchUrlWithOneMatch() {
String methodName = "testTransactionCreateInlineMatchUrlWithOneMatch";

5
src/changes/changes.xml
View File

@ -52,6 +52,11 @@
Prevent duplicates in $everything query response in JPA server. Thanks to @vlad-ignatov
for reporting!
</action>
<action type="fix">
Fix issue in calling JPA server transactions programmatically where resources
are linked by object reference and not by ID where indexes were not correctly
generated. This should not affect most users.
</action>
</release>
<release version="2.5" date="2017-06-08">
<action type="fix">