Merge remote-tracking branch 'origin/master' into mm-20240318-support-for-contained-true-search-parameter
This commit is contained in:
Martha
commit
adc28cc9fd
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@ -97,7 +97,7 @@ public class StorageSettings {
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private boolean myDefaultSearchParamsCanBeOverridden = true;
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private Set<Subscription.SubscriptionChannelType> mySupportedSubscriptionTypes = new HashSet<>();
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private boolean myAutoCreatePlaceholderReferenceTargets;
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private boolean myCrossPartitionSubscriptionEnabled = false;
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private boolean myCrossPartitionSubscriptionEnabled = true;
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private Integer myBundleBatchPoolSize = DEFAULT_BUNDLE_BATCH_POOL_SIZE;
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private Integer myBundleBatchMaxPoolSize = DEFAULT_BUNDLE_BATCH_MAX_POOL_SIZE;
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private boolean myEnableInMemorySubscriptionMatching = true;
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@ -20,6 +20,7 @@
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package ca.uhn.fhir.jpa.subscription.model.config;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.jpa.model.entity.StorageSettings;
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import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionStrategyEvaluator;
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import ca.uhn.fhir.jpa.subscription.match.registry.SubscriptionCanonicalizer;
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import org.springframework.context.annotation.Bean;
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@ -29,8 +30,9 @@ import org.springframework.context.annotation.Configuration;
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public class SubscriptionModelConfig {
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@Bean
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public SubscriptionCanonicalizer subscriptionCanonicalizer(FhirContext theFhirContext) {
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return new SubscriptionCanonicalizer(theFhirContext);
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public SubscriptionCanonicalizer subscriptionCanonicalizer(
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FhirContext theFhirContext, StorageSettings theStorageSettings) {
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return new SubscriptionCanonicalizer(theFhirContext, theStorageSettings);
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}
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@Bean
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@ -4,6 +4,7 @@ import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.interceptor.model.RequestPartitionId;
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import ca.uhn.fhir.jpa.api.dao.DaoRegistry;
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import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
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import ca.uhn.fhir.jpa.model.entity.StorageSettings;
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import ca.uhn.fhir.jpa.subscription.match.registry.SubscriptionCanonicalizer;
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import ca.uhn.fhir.jpa.subscription.match.registry.SubscriptionRegistry;
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import ca.uhn.fhir.jpa.subscription.model.ResourceModifiedJsonMessage;
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@ -50,7 +51,7 @@ public class SubscriptionRegisteringSubscriberTest {
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@Mock
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private SubscriptionRegistry mySubscriptionRegistry;
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@Spy
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private SubscriptionCanonicalizer mySubscriptionCanonicalizer = new SubscriptionCanonicalizer(myFhirContext);
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private SubscriptionCanonicalizer mySubscriptionCanonicalizer = new SubscriptionCanonicalizer(myFhirContext, new StorageSettings());
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@Mock
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private DaoRegistry myDaoRegistry;
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@Mock
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@ -2,6 +2,7 @@ package ca.uhn.fhir.jpa.subscription.match.registry;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.interceptor.api.IInterceptorBroadcaster;
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import ca.uhn.fhir.jpa.model.entity.StorageSettings;
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import ca.uhn.fhir.jpa.subscription.channel.subscription.ISubscriptionDeliveryChannelNamer;
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import ca.uhn.fhir.jpa.subscription.channel.subscription.SubscriptionChannelRegistry;
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import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscription;
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@ -33,7 +34,7 @@ public class SubscriptionRegistryTest {
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static FhirContext ourFhirContext = FhirContext.forR4Cached();
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@Spy
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SubscriptionCanonicalizer mySubscriptionCanonicalizer = new SubscriptionCanonicalizer(ourFhirContext);
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SubscriptionCanonicalizer mySubscriptionCanonicalizer = new SubscriptionCanonicalizer(ourFhirContext, new StorageSettings());
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@Spy
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ISubscriptionDeliveryChannelNamer mySubscriptionDeliveryChannelNamer = new TestChannelNamer();
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@ -1,6 +1,7 @@
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package ca.uhn.fhir.jpa.subscription.module;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.jpa.model.entity.StorageSettings;
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import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscription;
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import ca.uhn.fhir.jpa.subscription.match.registry.SubscriptionCanonicalizer;
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import ca.uhn.fhir.jpa.subscription.model.ResourceDeliveryJsonMessage;
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@ -8,12 +9,15 @@ import ca.uhn.fhir.jpa.subscription.model.ResourceDeliveryMessage;
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import ca.uhn.fhir.util.HapiExtensions;
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import com.fasterxml.jackson.core.JsonProcessingException;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import jakarta.annotation.Nonnull;
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import org.assertj.core.util.Lists;
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import org.hamcrest.Matchers;
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import org.hl7.fhir.r4.model.BooleanType;
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import org.hl7.fhir.r4.model.StringType;
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import org.hl7.fhir.r4.model.Subscription;
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import org.junit.jupiter.api.Test;
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import org.junit.jupiter.params.ParameterizedTest;
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import org.junit.jupiter.params.provider.ValueSource;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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@ -66,7 +70,7 @@ public class CanonicalSubscriptionTest {
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@Test
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public void testCanonicalSubscriptionRetainsMetaTags() throws IOException {
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4());
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4(), new StorageSettings());
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CanonicalSubscription sub1 = canonicalizer.canonicalize(makeMdmSubscription());
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assertTrue(sub1.getTags().keySet().contains(TAG_SYSTEM));
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assertEquals(sub1.getTags().get(TAG_SYSTEM), TAG_VALUE);
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@ -74,7 +78,7 @@ public class CanonicalSubscriptionTest {
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@Test
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public void emailDetailsEquals() {
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4());
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4(), new StorageSettings());
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CanonicalSubscription sub1 = canonicalizer.canonicalize(makeEmailSubscription());
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CanonicalSubscription sub2 = canonicalizer.canonicalize(makeEmailSubscription());
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assertTrue(sub1.equals(sub2));
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@ -82,7 +86,7 @@ public class CanonicalSubscriptionTest {
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@Test
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public void testSerializeMultiPartitionSubscription(){
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4());
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4(), new StorageSettings());
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Subscription subscription = makeEmailSubscription();
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subscription.addExtension(HapiExtensions.EXTENSION_SUBSCRIPTION_CROSS_PARTITION, new BooleanType().setValue(true));
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CanonicalSubscription canonicalSubscription = canonicalizer.canonicalize(subscription);
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@ -90,28 +94,30 @@ public class CanonicalSubscriptionTest {
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assertEquals(canonicalSubscription.getCrossPartitionEnabled(), true);
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}
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@Test
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public void testSerializeIncorrectMultiPartitionSubscription(){
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4());
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@ParameterizedTest
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@ValueSource(booleans = {true, false})
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public void testSerializeIncorrectMultiPartitionSubscription(boolean theIsCrossPartitionEnabled){
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final StorageSettings storageSettings = buildStorageSettings(theIsCrossPartitionEnabled);
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4(), storageSettings);
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Subscription subscription = makeEmailSubscription();
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subscription.addExtension(HapiExtensions.EXTENSION_SUBSCRIPTION_CROSS_PARTITION, new StringType().setValue("false"));
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CanonicalSubscription canonicalSubscription = canonicalizer.canonicalize(subscription);
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System.out.print(canonicalSubscription);
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assertEquals(canonicalSubscription.getCrossPartitionEnabled(), false);
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assertEquals(canonicalSubscription.getCrossPartitionEnabled(), theIsCrossPartitionEnabled);
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}
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@Test
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public void testSerializeNonMultiPartitionSubscription(){
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4());
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@ParameterizedTest
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@ValueSource(booleans = {true, false})
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public void testSerializeNonMultiPartitionSubscription(boolean theIsCrossPartitionEnabled){
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final StorageSettings storageSettings = buildStorageSettings(theIsCrossPartitionEnabled);
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SubscriptionCanonicalizer canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4(), storageSettings);
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Subscription subscription = makeEmailSubscription();
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subscription.addExtension(HapiExtensions.EXTENSION_SUBSCRIPTION_CROSS_PARTITION, new BooleanType().setValue(false));
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CanonicalSubscription canonicalSubscription = canonicalizer.canonicalize(subscription);
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System.out.print(canonicalSubscription);
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assertEquals(canonicalSubscription.getCrossPartitionEnabled(), false);
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assertEquals(canonicalSubscription.getCrossPartitionEnabled(), theIsCrossPartitionEnabled);
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}
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@Test
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@ -154,4 +160,11 @@ public class CanonicalSubscriptionTest {
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ResourceDeliveryMessage payload = resourceDeliveryMessage.getPayload();
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return payload.getSubscription();
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}
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@Nonnull
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private static StorageSettings buildStorageSettings(boolean theIsCrossPartitionEnabled) {
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final StorageSettings storageSettings = new StorageSettings();
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storageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
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return storageSettings;
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}
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}
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@ -27,6 +27,8 @@ import org.junit.jupiter.api.AfterEach;
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import org.junit.jupiter.api.BeforeEach;
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import org.junit.jupiter.api.Nested;
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import org.junit.jupiter.api.Test;
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import org.junit.jupiter.params.ParameterizedTest;
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import org.junit.jupiter.params.provider.ValueSource;
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import org.mockito.Answers;
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import org.mockito.InjectMocks;
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import org.mockito.Mock;
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@ -38,6 +40,7 @@ import java.util.Optional;
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import static ca.uhn.fhir.jpa.subscription.match.matcher.subscriber.SubscriptionCriteriaParser.TypeEnum.STARTYPE_EXPRESSION;
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import static org.junit.jupiter.api.Assertions.assertEquals;
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import static org.junit.jupiter.api.Assertions.fail;
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import static org.mockito.ArgumentMatchers.any;
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import static org.mockito.ArgumentMatchers.eq;
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import static org.mockito.Mockito.atLeastOnce;
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@ -227,8 +230,10 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
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ourObservationListener.awaitExpected();
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}
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@Test
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public void testSubscriptionAndResourceOnDiffPartitionNotMatch() throws InterruptedException {
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@ParameterizedTest
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@ValueSource(booleans = {true, false})
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public void testSubscriptionAndResourceOnDiffPartitionNotMatch(boolean theIsCrossPartitionEnabled) throws InterruptedException {
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myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
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myPartitionSettings.setPartitioningEnabled(true);
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String payload = "application/fhir+json";
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@ -240,13 +245,18 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
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mockSubscriptionRead(requestPartitionId, subscription);
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sendSubscription(subscription, requestPartitionId, true);
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mySubscriptionResourceNotMatched.setExpectedCount(1);
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sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionId(0));
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mySubscriptionResourceNotMatched.awaitExpected();
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final ThrowsInterrupted throwsInterrupted = () -> sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionId(0));
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if (theIsCrossPartitionEnabled) {
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runWithinLatchLogicExpectSuccess(throwsInterrupted);
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} else {
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runWithLatchLogicExpectFailure(throwsInterrupted);
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}
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}
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@Test
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public void testSubscriptionAndResourceOnDiffPartitionNotMatchPart2() throws InterruptedException {
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@ParameterizedTest
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@ValueSource(booleans = {true, false})
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public void testSubscriptionAndResourceOnDiffPartitionNotMatchPart2(boolean theIsCrossPartitionEnabled) throws InterruptedException {
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myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
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myPartitionSettings.setPartitioningEnabled(true);
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String payload = "application/fhir+json";
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@ -258,13 +268,19 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
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mockSubscriptionRead(requestPartitionId, subscription);
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sendSubscription(subscription, requestPartitionId, true);
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mySubscriptionResourceNotMatched.setExpectedCount(1);
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sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionId(1));
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mySubscriptionResourceNotMatched.awaitExpected();
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final ThrowsInterrupted throwsInterrupted = () -> sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionId(1));
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if (theIsCrossPartitionEnabled) {
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runWithinLatchLogicExpectSuccess(throwsInterrupted);
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} else {
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runWithLatchLogicExpectFailure(throwsInterrupted);
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}
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}
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|
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@Test
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public void testSubscriptionOnDefaultPartitionAndResourceOnDiffPartitionNotMatch() throws InterruptedException {
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@ParameterizedTest
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@ValueSource(booleans = {true, false})
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public void testSubscriptionOnDefaultPartitionAndResourceOnDiffPartitionNotMatch(boolean theIsCrossPartitionEnabled) throws InterruptedException {
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myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
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myPartitionSettings.setPartitioningEnabled(true);
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String payload = "application/fhir+json";
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|
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@ -276,13 +292,19 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
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mockSubscriptionRead(requestPartitionId, subscription);
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sendSubscription(subscription, requestPartitionId, true);
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mySubscriptionResourceNotMatched.setExpectedCount(1);
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sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionId(1));
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mySubscriptionResourceNotMatched.awaitExpected();
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final ThrowsInterrupted throwsInterrupted = () -> sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionId(1));
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|
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if (theIsCrossPartitionEnabled) {
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runWithinLatchLogicExpectSuccess(throwsInterrupted);
|
||||
} else {
|
||||
runWithLatchLogicExpectFailure(throwsInterrupted);
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testSubscriptionOnAPartitionAndResourceOnDefaultPartitionNotMatch() throws InterruptedException {
|
||||
@ParameterizedTest
|
||||
@ValueSource(booleans = {true, false})
|
||||
public void testSubscriptionOnAPartitionAndResourceOnDefaultPartitionNotMatch(boolean theIsCrossPartitionEnabled) throws InterruptedException {
|
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myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
|
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myPartitionSettings.setPartitioningEnabled(true);
|
||||
String payload = "application/fhir+json";
|
||||
|
||||
|
|
@ -294,9 +316,13 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
|
|||
mockSubscriptionRead(requestPartitionId, subscription);
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||||
sendSubscription(subscription, requestPartitionId, true);
|
||||
|
||||
mySubscriptionResourceNotMatched.setExpectedCount(1);
|
||||
sendObservation(code, "SNOMED-CT", RequestPartitionId.defaultPartition());
|
||||
mySubscriptionResourceNotMatched.awaitExpected();
|
||||
final ThrowsInterrupted throwsInterrupted = () -> sendObservation(code, "SNOMED-CT", RequestPartitionId.defaultPartition());
|
||||
|
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if (theIsCrossPartitionEnabled) {
|
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runWithinLatchLogicExpectSuccess(throwsInterrupted);
|
||||
} else {
|
||||
runWithLatchLogicExpectFailure(throwsInterrupted);
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
|
|
@ -320,8 +346,10 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
|
|||
ourObservationListener.awaitExpected();
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testSubscriptionOnOnePartitionDoNotMatchResourceOnMultiplePartitions() throws InterruptedException {
|
||||
@ParameterizedTest
|
||||
@ValueSource(booleans = {true, false})
|
||||
public void testSubscriptionOnOnePartitionDoNotMatchResourceOnMultiplePartitions(boolean theIsCrossPartitionEnabled) throws InterruptedException {
|
||||
myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
|
||||
myPartitionSettings.setPartitioningEnabled(true);
|
||||
String payload = "application/fhir+json";
|
||||
|
||||
|
|
@ -333,10 +361,13 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
|
|||
mockSubscriptionRead(requestPartitionId, subscription);
|
||||
sendSubscription(subscription, requestPartitionId, true);
|
||||
|
||||
mySubscriptionResourceNotMatched.setExpectedCount(1);
|
||||
List<Integer> partitionId = Collections.synchronizedList(Lists.newArrayList(0, 2));
|
||||
sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionIds(partitionId));
|
||||
mySubscriptionResourceNotMatched.awaitExpected();
|
||||
final ThrowsInterrupted throwsInterrupted = () -> sendObservation(code, "SNOMED-CT", RequestPartitionId.fromPartitionIds(Collections.synchronizedList(Lists.newArrayList(0, 2))));
|
||||
|
||||
if (theIsCrossPartitionEnabled) {
|
||||
runWithinLatchLogicExpectSuccess(throwsInterrupted);
|
||||
} else {
|
||||
runWithLatchLogicExpectFailure(throwsInterrupted);
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
|
|
@ -519,4 +550,31 @@ public class SubscriptionMatchingSubscriberTest extends BaseBlockingQueueSubscri
|
|||
verify(message, atLeastOnce()).getPayloadId(null);
|
||||
}
|
||||
}
|
||||
|
||||
private interface ThrowsInterrupted {
|
||||
void runOrThrow() throws InterruptedException;
|
||||
}
|
||||
|
||||
private void runWithLatchLogicExpectFailure(ThrowsInterrupted theRunnable) {
|
||||
try {
|
||||
mySubscriptionResourceNotMatched.setExpectedCount(1);
|
||||
theRunnable.runOrThrow();
|
||||
mySubscriptionResourceNotMatched.awaitExpected();
|
||||
} catch (InterruptedException exception) {
|
||||
Thread.currentThread().interrupt();
|
||||
}
|
||||
}
|
||||
|
||||
private void runWithinLatchLogicExpectSuccess(ThrowsInterrupted theRunnable) {
|
||||
try {
|
||||
ourObservationListener.setExpectedCount(1);
|
||||
mySubscriptionResourceMatched.setExpectedCount(1);
|
||||
theRunnable.runOrThrow();
|
||||
mySubscriptionResourceMatched.awaitExpected();
|
||||
ourObservationListener.awaitExpected();
|
||||
} catch (InterruptedException exception) {
|
||||
fail();
|
||||
Thread.currentThread().interrupt();
|
||||
}
|
||||
}
|
||||
}
|
||||
|
|
|
|||
|
|
@ -6,6 +6,7 @@ import ca.uhn.fhir.interceptor.api.Pointcut;
|
|||
import ca.uhn.fhir.jpa.api.config.JpaStorageSettings;
|
||||
import ca.uhn.fhir.jpa.api.dao.DaoRegistry;
|
||||
import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
|
||||
import ca.uhn.fhir.jpa.model.entity.StorageSettings;
|
||||
import ca.uhn.fhir.jpa.partition.IRequestPartitionHelperSvc;
|
||||
import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionStrategyEvaluator;
|
||||
import ca.uhn.fhir.jpa.subscription.match.registry.SubscriptionCanonicalizer;
|
||||
|
|
@ -226,7 +227,7 @@ public class SubscriptionValidatingInterceptorTest {
|
|||
|
||||
@Bean
|
||||
SubscriptionCanonicalizer subscriptionCanonicalizer(FhirContext theFhirContext) {
|
||||
return new SubscriptionCanonicalizer(theFhirContext);
|
||||
return new SubscriptionCanonicalizer(theFhirContext, new StorageSettings());
|
||||
}
|
||||
|
||||
@Bean
|
||||
|
|
|
|||
|
|
@ -5,6 +5,7 @@ import ca.uhn.fhir.interceptor.api.Interceptor;
|
|||
import ca.uhn.fhir.interceptor.api.Pointcut;
|
||||
import ca.uhn.fhir.interceptor.model.RequestPartitionId;
|
||||
import ca.uhn.fhir.jpa.api.config.JpaStorageSettings;
|
||||
import ca.uhn.fhir.jpa.api.dao.IFhirResourceDao;
|
||||
import ca.uhn.fhir.jpa.api.model.DaoMethodOutcome;
|
||||
import ca.uhn.fhir.jpa.api.model.ExpungeOptions;
|
||||
import ca.uhn.fhir.jpa.dao.r4.BasePartitioningR4Test;
|
||||
|
|
@ -24,15 +25,13 @@ import jakarta.servlet.ServletException;
|
|||
import org.awaitility.core.ConditionTimeoutException;
|
||||
import org.hl7.fhir.instance.model.api.IIdType;
|
||||
import org.hl7.fhir.instance.model.api.IPrimitiveType;
|
||||
import org.hl7.fhir.r4.model.BooleanType;
|
||||
import org.hl7.fhir.r4.model.Observation;
|
||||
import org.hl7.fhir.r4.model.Parameters;
|
||||
import org.hl7.fhir.r4.model.Patient;
|
||||
import org.hl7.fhir.r4.model.Subscription;
|
||||
import org.hl7.fhir.r4.model.*;
|
||||
import org.junit.jupiter.api.AfterEach;
|
||||
import org.junit.jupiter.api.Assertions;
|
||||
import org.junit.jupiter.api.BeforeEach;
|
||||
import org.junit.jupiter.api.Test;
|
||||
import org.junit.jupiter.params.ParameterizedTest;
|
||||
import org.junit.jupiter.params.provider.ValueSource;
|
||||
import org.slf4j.Logger;
|
||||
import org.slf4j.LoggerFactory;
|
||||
import org.springframework.beans.factory.annotation.Autowired;
|
||||
|
|
@ -41,6 +40,7 @@ import java.time.LocalDate;
|
|||
import java.time.Month;
|
||||
import java.util.ArrayList;
|
||||
import java.util.List;
|
||||
import java.util.stream.Stream;
|
||||
|
||||
import static org.awaitility.Awaitility.await;
|
||||
import static org.hamcrest.CoreMatchers.containsString;
|
||||
|
|
@ -146,8 +146,10 @@ public class PartitionedSubscriptionTriggeringR4Test extends BaseSubscriptionsR4
|
|||
Assertions.assertEquals(Constants.CT_FHIR_JSON_NEW, BaseSubscriptionsR4Test.ourRestfulServer.getRequestContentTypes().get(0));
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testCreateSubscriptionInPartitionAndResourceInDifferentPartition() throws Exception {
|
||||
@ParameterizedTest
|
||||
@ValueSource(booleans = {true, false})
|
||||
public void testCreateSubscriptionInPartitionAndResourceInDifferentPartition(boolean theIsCrossPartitionEnabled) throws Exception {
|
||||
myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
|
||||
String payload = "application/fhir+json";
|
||||
|
||||
String code = "1000000050";
|
||||
|
|
@ -169,31 +171,40 @@ public class PartitionedSubscriptionTriggeringR4Test extends BaseSubscriptionsR4
|
|||
Assertions.assertEquals(0, BaseSubscriptionsR4Test.ourPatientProvider.getCountCreate());
|
||||
|
||||
try {
|
||||
// Should have 0 matching subscription, if we get 1 update count then the test fails
|
||||
BaseSubscriptionsR4Test.ourPatientProvider.waitForUpdateCount(1);
|
||||
fail();
|
||||
if (!theIsCrossPartitionEnabled) {
|
||||
fail("Expecting a timeout and 0 matching subscriptions and thus a timeout if cross partition is DISabled");
|
||||
}
|
||||
Assertions.assertEquals(1, BaseSubscriptionsR4Test.ourRestfulServer.getRequestContentTypes().size());
|
||||
} catch (ConditionTimeoutException e) {
|
||||
Assertions.assertEquals(0, BaseSubscriptionsR4Test.ourRestfulServer.getRequestContentTypes().size());
|
||||
if (theIsCrossPartitionEnabled) {
|
||||
fail("Expecting no timeout and 1 matching subscriptions and thus a timeout if cross partition is enabled");
|
||||
} else {
|
||||
// Should have 0 matching subscription, if we get 1 update count then the test fails
|
||||
Assertions.assertEquals(0, BaseSubscriptionsR4Test.ourRestfulServer.getRequestContentTypes().size());
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@Test
|
||||
public void testManualTriggeredSubscriptionDoesNotCheckOutsideOfPartition() throws Exception {
|
||||
@ParameterizedTest
|
||||
@ValueSource(booleans = {true, false})
|
||||
public void testManualTriggeredSubscriptionDoesNotCheckOutsideOfPartition(boolean theIsCrossPartitionEnabled) throws Exception {
|
||||
myStorageSettings.setCrossPartitionSubscriptionEnabled(theIsCrossPartitionEnabled);
|
||||
String payload = "application/fhir+json";
|
||||
String code = "1000000050";
|
||||
String criteria1 = "Observation?code=SNOMED-CT|" + code + "&_format=xml";
|
||||
|
||||
//Given: We store a resource in partition 2
|
||||
myPartitionInterceptor.setRequestPartitionId(REQ_PART_2);
|
||||
IIdType observationIdPartitionTwo = myDaoRegistry.getResourceDao("Observation").create(createBaseObservation(code, "SNOMED-CT"), mySrd).getId();
|
||||
final IFhirResourceDao observation = myDaoRegistry.getResourceDao("Observation");
|
||||
IIdType observationIdPartitionTwo = observation.create(createBaseObservation(code, "SNOMED-CT"), mySrd).getId();
|
||||
|
||||
//Given: We store a similar resource in partition 1
|
||||
myPartitionInterceptor.setRequestPartitionId(REQ_PART_1);
|
||||
IIdType observationIdPartitionOne = myDaoRegistry.getResourceDao("Observation").create(createBaseObservation(code, "SNOMED-CT"), mySrd).getId();
|
||||
IIdType observationIdPartitionOne = observation.create(createBaseObservation(code, "SNOMED-CT"), mySrd).getId();
|
||||
|
||||
//Given: We create a subscrioption on Partition 1
|
||||
IIdType subscriptionId= myDaoRegistry.getResourceDao("Subscription").create(newSubscription(criteria1, payload), mySrd).getId();
|
||||
IIdType subscriptionId = myDaoRegistry.getResourceDao("Subscription").create(newSubscription(criteria1, payload), mySrd).getId();
|
||||
waitForActivatedSubscriptionCount(1);
|
||||
|
||||
ArrayList<IPrimitiveType<String>> searchUrlList = new ArrayList<>();
|
||||
|
|
@ -204,8 +215,14 @@ public class PartitionedSubscriptionTriggeringR4Test extends BaseSubscriptionsR4
|
|||
|
||||
waitForQueueToDrain();
|
||||
List<Observation> resourceUpdates = BaseSubscriptionsR4Test.ourObservationProvider.getResourceUpdates();
|
||||
assertThat(resourceUpdates.size(), is(equalTo(1)));
|
||||
assertThat(resourceUpdates.get(0).getId(), is(equalTo(observationIdPartitionOne.toString())));
|
||||
if (theIsCrossPartitionEnabled) {
|
||||
assertThat(resourceUpdates.size(), is(equalTo(2)));
|
||||
assertThat(resourceUpdates.stream().map(Resource::getId).sorted().toList(),
|
||||
is(equalTo(Stream.of(observationIdPartitionOne, observationIdPartitionTwo).map(Object::toString).sorted().toList())));
|
||||
} else {
|
||||
assertThat(resourceUpdates.size(), is(equalTo(1)));
|
||||
assertThat(resourceUpdates.get(0).getId(), is(equalTo(observationIdPartitionOne.toString())));
|
||||
}
|
||||
|
||||
String responseValue = resultParameters.getParameter().get(0).getValue().primitiveValue();
|
||||
assertThat(responseValue, containsString("Subscription triggering job submitted as JOB ID"));
|
||||
|
|
|
|||
|
|
@ -5,6 +5,7 @@ import ca.uhn.fhir.i18n.Msg;
|
|||
import ca.uhn.fhir.interceptor.model.RequestPartitionId;
|
||||
import ca.uhn.fhir.jpa.api.config.JpaStorageSettings;
|
||||
import ca.uhn.fhir.jpa.api.dao.DaoRegistry;
|
||||
import ca.uhn.fhir.jpa.model.entity.StorageSettings;
|
||||
import ca.uhn.fhir.jpa.partition.IRequestPartitionHelperSvc;
|
||||
import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionMatchingStrategy;
|
||||
import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionStrategyEvaluator;
|
||||
|
|
@ -63,7 +64,7 @@ public class SubscriptionValidatingInterceptorTest {
|
|||
@BeforeEach
|
||||
public void before() {
|
||||
mySvc = new SubscriptionValidatingInterceptor();
|
||||
mySubscriptionCanonicalizer = spy(new SubscriptionCanonicalizer(myCtx));
|
||||
mySubscriptionCanonicalizer = spy(new SubscriptionCanonicalizer(myCtx, new StorageSettings()));
|
||||
mySvc.setSubscriptionCanonicalizerForUnitTest(mySubscriptionCanonicalizer);
|
||||
mySvc.setDaoRegistryForUnitTest(myDaoRegistry);
|
||||
mySvc.setSubscriptionStrategyEvaluatorForUnitTest(mySubscriptionStrategyEvaluator);
|
||||
|
|
|
|||
|
|
@ -27,6 +27,11 @@ import org.hl7.fhir.instance.model.api.IIdType;
|
|||
|
||||
import java.util.Set;
|
||||
|
||||
/**
|
||||
* @deprecated Users should be instead be granted more granular write permissions that cover PATCH operations.
|
||||
* @since 7.2.0
|
||||
*/
|
||||
@Deprecated
|
||||
class RuleImplPatch extends BaseRule {
|
||||
private boolean myAllRequests;
|
||||
|
||||
|
|
|
|||
|
|
@ -48,6 +48,7 @@ import java.util.TreeSet;
|
|||
|
||||
@SuppressWarnings("JavadocLinkAsPlainText")
|
||||
public class JpaStorageSettings extends StorageSettings {
|
||||
private static final Logger ourLog = LoggerFactory.getLogger(JpaStorageSettings.class);
|
||||
|
||||
/**
|
||||
* Default value for {@link #getBulkExportFileMaximumSize()}: 100 MB
|
||||
|
|
@ -105,7 +106,6 @@ public class JpaStorageSettings extends StorageSettings {
|
|||
*/
|
||||
private static final Integer DEFAULT_MAXIMUM_SEARCH_RESULT_COUNT_IN_TRANSACTION = null;
|
||||
|
||||
private static final Logger ourLog = LoggerFactory.getLogger(JpaStorageSettings.class);
|
||||
private static final int DEFAULT_REINDEX_BATCH_SIZE = 800;
|
||||
private static final int DEFAULT_MAXIMUM_DELETE_CONFLICT_COUNT = 60;
|
||||
/**
|
||||
|
|
|
|||
|
|
@ -23,6 +23,7 @@ import ca.uhn.fhir.context.ConfigurationException;
|
|||
import ca.uhn.fhir.context.FhirContext;
|
||||
import ca.uhn.fhir.i18n.Msg;
|
||||
import ca.uhn.fhir.interceptor.model.RequestPartitionId;
|
||||
import ca.uhn.fhir.jpa.model.entity.StorageSettings;
|
||||
import ca.uhn.fhir.jpa.subscription.match.matcher.matching.SubscriptionMatchingStrategy;
|
||||
import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscription;
|
||||
import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscriptionChannelType;
|
||||
|
|
@ -68,10 +69,23 @@ public class SubscriptionCanonicalizer {
|
|||
private static final Logger ourLog = LoggerFactory.getLogger(SubscriptionCanonicalizer.class);
|
||||
|
||||
final FhirContext myFhirContext;
|
||||
private final StorageSettings myStorageSettings;
|
||||
|
||||
@Autowired
|
||||
public SubscriptionCanonicalizer(FhirContext theFhirContext, StorageSettings theStorageSettings) {
|
||||
myFhirContext = theFhirContext;
|
||||
myStorageSettings = theStorageSettings;
|
||||
}
|
||||
|
||||
// TODO: LD: remove this constructor once all callers call the 2 arg constructor above
|
||||
|
||||
/**
|
||||
* @deprecated All callers should invoke {@link SubscriptionCanonicalizer()} instead.
|
||||
*/
|
||||
@Deprecated
|
||||
public SubscriptionCanonicalizer(FhirContext theFhirContext) {
|
||||
myFhirContext = theFhirContext;
|
||||
myStorageSettings = new StorageSettings();
|
||||
}
|
||||
|
||||
public CanonicalSubscription canonicalize(IBaseResource theSubscription) {
|
||||
|
|
@ -109,7 +123,7 @@ public class SubscriptionCanonicalizer {
|
|||
retVal.setIdElement(subscription.getIdElement());
|
||||
retVal.setPayloadString(channel.getPayload());
|
||||
retVal.setTags(extractTags(subscription));
|
||||
retVal.setCrossPartitionEnabled(SubscriptionUtil.isCrossPartition(theSubscription));
|
||||
handleCrossPartition(theSubscription, retVal);
|
||||
retVal.setSendDeleteMessages(extractDeleteExtensionDstu2(subscription));
|
||||
} catch (FHIRException theE) {
|
||||
throw new InternalErrorException(Msg.code(557) + theE);
|
||||
|
|
@ -161,7 +175,7 @@ public class SubscriptionCanonicalizer {
|
|||
retVal.setPayloadSearchCriteria(
|
||||
getExtensionString(subscription, HapiExtensions.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_CRITERIA));
|
||||
retVal.setTags(extractTags(subscription));
|
||||
retVal.setCrossPartitionEnabled(SubscriptionUtil.isCrossPartition(theSubscription));
|
||||
handleCrossPartition(theSubscription, retVal);
|
||||
|
||||
if (retVal.getChannelType() == CanonicalSubscriptionChannelType.EMAIL) {
|
||||
String from;
|
||||
|
|
@ -292,7 +306,7 @@ public class SubscriptionCanonicalizer {
|
|||
getExtensionString(subscription, HapiExtensions.EXT_SUBSCRIPTION_PAYLOAD_SEARCH_CRITERIA));
|
||||
retVal.setTags(extractTags(subscription));
|
||||
setPartitionIdOnReturnValue(theSubscription, retVal);
|
||||
retVal.setCrossPartitionEnabled(SubscriptionUtil.isCrossPartition(theSubscription));
|
||||
handleCrossPartition(theSubscription, retVal);
|
||||
|
||||
List<org.hl7.fhir.r4.model.CanonicalType> profiles =
|
||||
subscription.getMeta().getProfile();
|
||||
|
|
@ -497,6 +511,8 @@ public class SubscriptionCanonicalizer {
|
|||
retVal.setSendDeleteMessages(extension.getValueBooleanType().booleanValue());
|
||||
}
|
||||
|
||||
handleCrossPartition(theSubscription, retVal);
|
||||
|
||||
return retVal;
|
||||
}
|
||||
|
||||
|
|
@ -561,6 +577,8 @@ public class SubscriptionCanonicalizer {
|
|||
|
||||
setR5FlagsBasedOnChannelType(subscription, retVal);
|
||||
|
||||
handleCrossPartition(theSubscription, retVal);
|
||||
|
||||
return retVal;
|
||||
}
|
||||
|
||||
|
|
@ -762,4 +780,12 @@ public class SubscriptionCanonicalizer {
|
|||
}
|
||||
return status.getValueAsString();
|
||||
}
|
||||
|
||||
private void handleCrossPartition(IBaseResource theSubscription, CanonicalSubscription retVal) {
|
||||
if (myStorageSettings.isCrossPartitionSubscriptionEnabled()) {
|
||||
retVal.setCrossPartitionEnabled(true);
|
||||
} else {
|
||||
retVal.setCrossPartitionEnabled(SubscriptionUtil.isCrossPartition(theSubscription));
|
||||
}
|
||||
}
|
||||
}
|
||||
|
|
|
|||
|
|
@ -1,23 +1,35 @@
|
|||
package ca.uhn.fhir.jpa.subscription.match.registry;
|
||||
|
||||
import ca.uhn.fhir.context.FhirContext;
|
||||
import ca.uhn.fhir.jpa.model.entity.StorageSettings;
|
||||
import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscription;
|
||||
import ca.uhn.fhir.jpa.subscription.model.CanonicalSubscriptionChannelType;
|
||||
import ca.uhn.fhir.jpa.subscription.model.CanonicalTopicSubscriptionFilter;
|
||||
import ca.uhn.fhir.model.api.ExtensionDt;
|
||||
import ca.uhn.fhir.model.api.IFhirVersion;
|
||||
import ca.uhn.fhir.model.dstu2.FhirDstu2;
|
||||
import ca.uhn.fhir.model.primitive.BooleanDt;
|
||||
import ca.uhn.fhir.subscription.SubscriptionConstants;
|
||||
import ca.uhn.fhir.subscription.SubscriptionTestDataHelper;
|
||||
import org.hl7.fhir.dstu3.hapi.ctx.FhirDstu3;
|
||||
import org.hl7.fhir.instance.model.api.IBaseResource;
|
||||
import org.hl7.fhir.r4.hapi.ctx.FhirR4;
|
||||
import org.hl7.fhir.r4.model.BooleanType;
|
||||
import org.hl7.fhir.r4.model.Extension;
|
||||
import org.hl7.fhir.r4.model.Subscription;
|
||||
import org.hl7.fhir.r4b.hapi.ctx.FhirR4B;
|
||||
import org.hl7.fhir.r5.hapi.ctx.FhirR5;
|
||||
import org.hl7.fhir.r5.model.Coding;
|
||||
import org.hl7.fhir.r5.model.Enumerations;
|
||||
import org.jetbrains.annotations.NotNull;
|
||||
import org.junit.jupiter.api.Test;
|
||||
import org.junit.jupiter.params.ParameterizedTest;
|
||||
import org.junit.jupiter.params.provider.Arguments;
|
||||
import org.junit.jupiter.params.provider.MethodSource;
|
||||
import org.junit.jupiter.params.provider.ValueSource;
|
||||
|
||||
import java.util.stream.Stream;
|
||||
|
||||
import static ca.uhn.fhir.rest.api.Constants.CT_FHIR_JSON_NEW;
|
||||
import static ca.uhn.fhir.util.HapiExtensions.EX_SEND_DELETE_MESSAGES;
|
||||
import static org.hamcrest.MatcherAssert.assertThat;
|
||||
|
|
@ -26,12 +38,13 @@ import static org.junit.jupiter.api.Assertions.assertEquals;
|
|||
import static org.junit.jupiter.api.Assertions.assertFalse;
|
||||
import static org.junit.jupiter.api.Assertions.assertNull;
|
||||
import static org.junit.jupiter.api.Assertions.assertTrue;
|
||||
import static org.junit.jupiter.params.provider.Arguments.arguments;
|
||||
|
||||
class SubscriptionCanonicalizerTest {
|
||||
|
||||
FhirContext r4Context = FhirContext.forR4();
|
||||
|
||||
private final SubscriptionCanonicalizer testedSC = new SubscriptionCanonicalizer(r4Context);
|
||||
private final SubscriptionCanonicalizer testedSC = new SubscriptionCanonicalizer(r4Context, new StorageSettings());
|
||||
|
||||
@Test
|
||||
void testCanonicalizeR4SendDeleteMessagesSetsExtensionValueNotPresent() {
|
||||
|
|
@ -72,7 +85,7 @@ class SubscriptionCanonicalizerTest {
|
|||
@Test
|
||||
public void testCanonicalizeDstu2SendDeleteMessages() {
|
||||
//setup
|
||||
SubscriptionCanonicalizer dstu2Canonicalizer = new SubscriptionCanonicalizer(FhirContext.forDstu2Cached());
|
||||
SubscriptionCanonicalizer dstu2Canonicalizer = new SubscriptionCanonicalizer(FhirContext.forDstu2Cached(), new StorageSettings());
|
||||
ca.uhn.fhir.model.dstu2.resource.Subscription dstu2Sub = new ca.uhn.fhir.model.dstu2.resource.Subscription();
|
||||
ExtensionDt extensionDt = new ExtensionDt();
|
||||
extensionDt.setUrl(EX_SEND_DELETE_MESSAGES);
|
||||
|
|
@ -108,7 +121,7 @@ class SubscriptionCanonicalizerTest {
|
|||
@ValueSource(strings = {"full-resource", "id-only", "empty"})
|
||||
public void testR5Canonicalize_returnsCorrectCanonicalSubscription(String thePayloadContent) {
|
||||
// setup
|
||||
SubscriptionCanonicalizer r5Canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR5Cached());
|
||||
SubscriptionCanonicalizer r5Canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR5Cached(), new StorageSettings());
|
||||
org.hl7.fhir.r5.model.Subscription.SubscriptionPayloadContent payloadContent =
|
||||
org.hl7.fhir.r5.model.Subscription.SubscriptionPayloadContent.fromCode(thePayloadContent);
|
||||
org.hl7.fhir.r5.model.Subscription subscription = buildR5Subscription(payloadContent);
|
||||
|
|
@ -148,7 +161,7 @@ class SubscriptionCanonicalizerTest {
|
|||
// Example drawn from http://build.fhir.org/ig/HL7/fhir-subscription-backport-ig/Subscription-subscription-zulip.json.html
|
||||
|
||||
// setup
|
||||
SubscriptionCanonicalizer r4bCanonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4BCached());
|
||||
SubscriptionCanonicalizer r4bCanonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4BCached(), new StorageSettings());
|
||||
org.hl7.fhir.r4b.model.Subscription subscription = buildR4BSubscription(thePayloadContent);
|
||||
|
||||
// execute
|
||||
|
|
@ -160,6 +173,46 @@ class SubscriptionCanonicalizerTest {
|
|||
verifyChannelParameters(canonical, thePayloadContent);
|
||||
}
|
||||
|
||||
|
||||
private static Stream<Arguments> crossPartitionParams() {
|
||||
return Stream.of(
|
||||
arguments(true, FhirContext.forDstu2Cached()),
|
||||
arguments(false, FhirContext.forDstu2Cached()),
|
||||
arguments(true, FhirContext.forDstu3Cached()),
|
||||
arguments(false, FhirContext.forDstu3Cached()),
|
||||
arguments(true, FhirContext.forR4Cached()),
|
||||
arguments(false, FhirContext.forR4Cached()),
|
||||
arguments(true, FhirContext.forR4BCached()),
|
||||
arguments(false, FhirContext.forR4BCached()),
|
||||
arguments(true, FhirContext.forR5Cached()),
|
||||
arguments(false, FhirContext.forR5Cached())
|
||||
);
|
||||
}
|
||||
@ParameterizedTest
|
||||
@MethodSource("crossPartitionParams")
|
||||
void testCrossPartition(boolean theCrossPartitionSubscriptionEnabled, FhirContext theFhirContext) {
|
||||
final IFhirVersion version = theFhirContext.getVersion();
|
||||
IBaseResource subscription = null;
|
||||
if (version instanceof FhirDstu2){
|
||||
subscription = new ca.uhn.fhir.model.dstu2.resource.Subscription();
|
||||
} else if (version instanceof FhirDstu3){
|
||||
subscription = new org.hl7.fhir.dstu3.model.Subscription();
|
||||
} else if (version instanceof FhirR4){
|
||||
subscription = new Subscription();
|
||||
} else if (version instanceof FhirR4B){
|
||||
subscription = new org.hl7.fhir.r4b.model.Subscription();
|
||||
} else if (version instanceof FhirR5){
|
||||
subscription = new org.hl7.fhir.r5.model.Subscription();
|
||||
}
|
||||
|
||||
final StorageSettings storageSettings = new StorageSettings();
|
||||
storageSettings.setCrossPartitionSubscriptionEnabled(theCrossPartitionSubscriptionEnabled);
|
||||
final SubscriptionCanonicalizer subscriptionCanonicalizer = new SubscriptionCanonicalizer(theFhirContext, storageSettings);
|
||||
final CanonicalSubscription canonicalSubscription = subscriptionCanonicalizer.canonicalize(subscription);
|
||||
|
||||
assertEquals(theCrossPartitionSubscriptionEnabled, canonicalSubscription.getCrossPartitionEnabled());
|
||||
}
|
||||
|
||||
private org.hl7.fhir.r4b.model.Subscription buildR4BSubscription(String thePayloadContent) {
|
||||
org.hl7.fhir.r4b.model.Subscription subscription = new org.hl7.fhir.r4b.model.Subscription();
|
||||
|
||||
|
|
@ -195,7 +248,7 @@ class SubscriptionCanonicalizerTest {
|
|||
// Example drawn from http://build.fhir.org/ig/HL7/fhir-subscription-backport-ig/Subscription-subscription-zulip.json.html
|
||||
|
||||
// setup
|
||||
SubscriptionCanonicalizer r4Canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4Cached());
|
||||
SubscriptionCanonicalizer r4Canonicalizer = new SubscriptionCanonicalizer(FhirContext.forR4Cached(), new StorageSettings());
|
||||
|
||||
// execute
|
||||
Subscription subscription = SubscriptionTestDataHelper.buildR4TopicSubscriptionWithContent(thePayloadContent);
|
||||
|
|
|
|||
Loading…
Reference in New Issue