Finally building correctly!
This commit is contained in:
parent
6464ce9304
commit
bd4e1d3388
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@ -37,12 +37,6 @@
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</exclusion>
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</exclusion>
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</exclusions>
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</exclusions>
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</dependency>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-structures-dstu</artifactId>
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<version>${project.version}</version>
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<optional>true</optional>
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</dependency>
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<dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-structures-dstu2</artifactId>
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<artifactId>hapi-fhir-structures-dstu2</artifactId>
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@ -230,31 +224,6 @@
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<goal>shade</goal>
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<goal>shade</goal>
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</goals>
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</goals>
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</execution>
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</execution>
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<!-- dstu jar -->
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<execution>
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<id>dstu</id>
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<phase>package</phase>
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<goals>
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<goal>shade</goal>
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</goals>
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<configuration>
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<shadedClassifierName>dstu</shadedClassifierName>
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<artifactSet>
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<includes>
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<include>ca.uhn.hapi.fhir:hapi-fhir-structures-dstu</include>
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</includes>
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</artifactSet>
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<!-- Exclude server side stuff, except exceptions which are used clientside -->
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<!--filters>
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<filter>
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<artifact>ca.uhn.hapi.fhir:hapi-fhir-structures-dstu</artifact>
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<excludes>
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<exclude>ca/uhn/fhir/rest/server/**</exclude>
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</excludes>
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</filter>
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</filters-->
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</configuration>
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</execution>
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<!-- dstu2 jar -->
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<!-- dstu2 jar -->
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<execution>
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<execution>
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<id>dstu2</id>
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<id>dstu2</id>
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@ -1,14 +1,13 @@
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package ca.uhn.fhir.android;
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package ca.uhn.fhir.android;
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import static org.junit.Assert.*;
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import static org.junit.Assert.assertEquals;
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import static org.junit.Assert.fail;
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import java.io.File;
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import java.io.File;
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import java.util.*;
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import java.util.*;
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import java.util.zip.ZipEntry;
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import java.util.zip.ZipEntry;
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import java.util.zip.ZipFile;
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import java.util.zip.ZipFile;
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import javax.naming.ConfigurationException;
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import org.apache.commons.io.FileUtils;
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import org.apache.commons.io.FileUtils;
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import org.apache.commons.io.filefilter.WildcardFileFilter;
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import org.apache.commons.io.filefilter.WildcardFileFilter;
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import org.junit.BeforeClass;
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import org.junit.BeforeClass;
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@ -18,7 +17,7 @@ import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.model.dstu2.composite.QuantityDt;
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import ca.uhn.fhir.model.dstu2.composite.QuantityDt;
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import ca.uhn.fhir.model.dstu2.resource.Observation;
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import ca.uhn.fhir.model.dstu2.resource.Observation;
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import ca.uhn.fhir.model.dstu2.resource.Patient;
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import ca.uhn.fhir.model.dstu2.resource.Patient;
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import ca.uhn.fhir.rest.client.IGenericClient;
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import ca.uhn.fhir.rest.client.api.IGenericClient;
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import ca.uhn.fhir.rest.client.exceptions.FhirClientConnectionException;
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import ca.uhn.fhir.rest.client.exceptions.FhirClientConnectionException;
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public class BuiltJarDstu2IT {
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public class BuiltJarDstu2IT {
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@ -9,14 +9,13 @@ import java.util.zip.ZipFile;
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import org.apache.commons.io.FileUtils;
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import org.apache.commons.io.FileUtils;
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import org.apache.commons.io.filefilter.WildcardFileFilter;
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import org.apache.commons.io.filefilter.WildcardFileFilter;
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import org.junit.BeforeClass;
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import org.junit.Test;
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import org.junit.Test;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.model.dstu2.composite.QuantityDt;
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import ca.uhn.fhir.model.dstu2.composite.QuantityDt;
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import ca.uhn.fhir.model.dstu2.resource.Observation;
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import ca.uhn.fhir.model.dstu2.resource.Observation;
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import ca.uhn.fhir.model.dstu2.resource.Patient;
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import ca.uhn.fhir.model.dstu2.resource.Patient;
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import ca.uhn.fhir.rest.client.IGenericClient;
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import ca.uhn.fhir.rest.client.api.IGenericClient;
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import ca.uhn.fhir.rest.client.exceptions.FhirClientConnectionException;
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import ca.uhn.fhir.rest.client.exceptions.FhirClientConnectionException;
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public class BuiltJarDstu2ShadeIT {
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public class BuiltJarDstu2ShadeIT {
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@ -1,10 +1,6 @@
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package ca.uhn.fhir.android.client;
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package ca.uhn.fhir.android.client;
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import static org.junit.Assert.assertArrayEquals;
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import static org.junit.Assert.*;
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import static org.junit.Assert.assertEquals;
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import static org.junit.Assert.assertNotNull;
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import static org.junit.Assert.assertNull;
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import static org.junit.Assert.fail;
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import static org.mockito.Mockito.mock;
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import static org.mockito.Mockito.mock;
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import static org.mockito.Mockito.when;
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import static org.mockito.Mockito.when;
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@ -12,14 +8,8 @@ import java.io.IOException;
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import java.util.Date;
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import java.util.Date;
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import org.apache.http.client.ClientProtocolException;
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import org.apache.http.client.ClientProtocolException;
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import org.hl7.fhir.dstu3.model.Binary;
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import org.hl7.fhir.dstu3.model.*;
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import org.hl7.fhir.dstu3.model.Bundle;
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import org.junit.*;
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import org.hl7.fhir.dstu3.model.OperationOutcome;
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import org.hl7.fhir.dstu3.model.Patient;
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import org.junit.AfterClass;
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import org.junit.Before;
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import org.junit.BeforeClass;
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import org.junit.Test;
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import org.mockito.ArgumentCaptor;
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import org.mockito.ArgumentCaptor;
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import org.mockito.Mockito;
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import org.mockito.Mockito;
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import org.mockito.invocation.InvocationOnMock;
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import org.mockito.invocation.InvocationOnMock;
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@ -28,12 +18,12 @@ import org.mockito.stubbing.Answer;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.context.FhirVersionEnum;
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import ca.uhn.fhir.context.FhirVersionEnum;
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import ca.uhn.fhir.parser.IParser;
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import ca.uhn.fhir.parser.IParser;
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import ca.uhn.fhir.rest.api.Constants;
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import ca.uhn.fhir.rest.api.MethodOutcome;
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import ca.uhn.fhir.rest.api.MethodOutcome;
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import ca.uhn.fhir.rest.api.PreferReturnEnum;
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import ca.uhn.fhir.rest.api.PreferReturnEnum;
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import ca.uhn.fhir.rest.client.IGenericClient;
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import ca.uhn.fhir.rest.client.api.IGenericClient;
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import ca.uhn.fhir.rest.client.ServerValidationModeEnum;
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import ca.uhn.fhir.rest.client.api.ServerValidationModeEnum;
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import ca.uhn.fhir.rest.client.exceptions.FhirClientConnectionException;
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import ca.uhn.fhir.rest.client.exceptions.FhirClientConnectionException;
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import ca.uhn.fhir.rest.server.Constants;
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import ca.uhn.fhir.util.TestUtil;
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import ca.uhn.fhir.util.TestUtil;
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import ca.uhn.fhir.util.VersionUtil;
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import ca.uhn.fhir.util.VersionUtil;
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import okhttp3.*;
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import okhttp3.*;
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@ -76,6 +76,11 @@
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</exclusion>
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</exclusion>
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</exclusions>
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</exclusions>
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</dependency>
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</dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-validation-resources-dstu2</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<dependency>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<groupId>ca.uhn.hapi.fhir</groupId>
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<artifactId>hapi-fhir-structures-dstu3</artifactId>
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<artifactId>hapi-fhir-structures-dstu3</artifactId>
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@ -35,14 +35,14 @@ public class MultiVersionXmlParserTest {
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String str;
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String str;
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str = ourCtxDstu2.newXmlParser().encodeResourceToString(p);
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str = ourCtxDstu2.newXmlParser().encodeResourceToString(p);
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ourLog.info(str);
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ourLog.info(str);
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assertThat(str, Matchers.stringContainsInOrder("<extension url=\"http://foo#ext\"><valueQuantity><value value=\"2.2\"", "<comparator value=\"<\"", "<units value=\"g/L\"",
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assertThat(str, Matchers.stringContainsInOrder("<extension url=\"http://foo#ext\"><valueQuantity><value value=\"2.2\"", "<comparator value=\"<\"", "<unit value=\"g/L\"",
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"</valueQuantity></extension>"));
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"</valueQuantity></extension>"));
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try {
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try {
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FhirContext.forDstu2().newXmlParser().encodeResourceToString(p);
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FhirContext.forDstu3().newXmlParser().encodeResourceToString(p);
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fail();
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fail();
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} catch (IllegalArgumentException e) {
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} catch (IllegalArgumentException e) {
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assertEquals("This parser is for FHIR version DSTU2 - Can not encode a structure for version DSTU1", e.getMessage());
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assertEquals("This parser is for FHIR version DSTU3 - Can not encode a structure for version DSTU2", e.getMessage());
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}
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}
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}
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}
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String res = ourCtxDstu2.newXmlParser().encodeResourceToString(p);
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String res = ourCtxDstu2.newXmlParser().encodeResourceToString(p);
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try {
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try {
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ourCtxDstu2.newXmlParser().parseResource(ca.uhn.fhir.model.dstu2.resource.Patient.class, res);
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ourCtxDstu3.newXmlParser().parseResource(ca.uhn.fhir.model.dstu2.resource.Patient.class, res);
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fail();
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fail();
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} catch (ConfigurationException e) {
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} catch (ConfigurationException e) {
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assertEquals("This context is for FHIR version \"DSTU1\" but the class \"ca.uhn.fhir.model.dstu2.resource.Patient\" is for version \"DSTU2\"", e.getMessage());
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assertEquals("This context is for FHIR version \"DSTU3\" but the class \"ca.uhn.fhir.model.dstu2.resource.Patient\" is for version \"DSTU2\"", e.getMessage());
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}
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}
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try {
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try {
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ourCtxDstu3.newXmlParser().parseResource(Patient.class, res);
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ourCtxDstu3.newXmlParser().parseResource(Patient.class, res);
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fail();
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fail();
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} catch (ConfigurationException e) {
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} catch (ConfigurationException e) {
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assertEquals("This context is for FHIR version \"DSTU2\" but the class \"ca.uhn.fhir.model.dstu.resource.Patient\" is for version \"DSTU1\"", e.getMessage());
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assertEquals("This context is for FHIR version \"DSTU3\" but the class \"ca.uhn.fhir.model.dstu2.resource.Patient\" is for version \"DSTU2\"", e.getMessage());
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}
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}
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}
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}
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@ -11,9 +11,9 @@ import ca.uhn.fhir.model.dstu2.resource.Patient;
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public class FhirContextTest {
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public class FhirContextTest {
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@Test
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@Test
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public void testWrongVersionDoesntGetInContext1() {
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public void testWrongVersionDoesntGetInContext2() {
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FhirContext ctx = FhirContext.forDstu1();
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FhirContext ctx = FhirContext.forDstu2();
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RuntimeResourceDefinition def = ctx.getResourceDefinition("Patient");
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RuntimeResourceDefinition def = ctx.getResourceDefinition("Patient");
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assertEquals(Patient.class, def.getImplementingClass());
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assertEquals(Patient.class, def.getImplementingClass());
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}
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}
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@ -5,10 +5,10 @@ import static org.junit.Assert.assertFalse;
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import static org.junit.Assert.assertTrue;
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import static org.junit.Assert.assertTrue;
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import static org.junit.Assert.fail;
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import static org.junit.Assert.fail;
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import org.hl7.fhir.dstu3.model.Patient;
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import org.junit.Test;
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import org.junit.Test;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.context.FhirContext;
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import ca.uhn.fhir.model.dstu2.resource.Patient;
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import ca.uhn.fhir.validation.FhirValidator;
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import ca.uhn.fhir.validation.FhirValidator;
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public class ValidatorTest {
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public class ValidatorTest {
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@ -16,14 +16,14 @@ public class ValidatorTest {
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@Test
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@Test
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public void testValidator() {
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public void testValidator() {
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FhirContext ctx = FhirContext.forDstu1();
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FhirContext ctx = FhirContext.forDstu2();
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FhirValidator val = ctx.newValidator();
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FhirValidator val = ctx.newValidator();
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try {
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try {
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val.validateWithResult(new Patient());
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val.validateWithResult(new Patient());
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fail();
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fail();
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} catch (IllegalArgumentException e) {
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} catch (IllegalArgumentException e) {
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assertEquals("This parser is for FHIR version DSTU1 - Can not encode a structure for version DSTU2", e.getMessage());
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assertEquals("This parser is for FHIR version DSTU2 - Can not encode a structure for version DSTU3", e.getMessage());
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}
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}
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// Phloc is not onthe classpath
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// Phloc is not onthe classpath
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|
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@ -48,11 +48,6 @@
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<classifier>classes</classifier>
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<classifier>classes</classifier>
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</dependency>
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</dependency>
|
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|
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<dependency>
|
|
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<groupId>ca.uhn.hapi.fhir</groupId>
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|
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<artifactId>hapi-fhir-structures-dstu</artifactId>
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|
||||||
<version>${project.version}</version>
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|
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</dependency>
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|
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<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-structures-dstu2</artifactId>
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<artifactId>hapi-fhir-structures-dstu2</artifactId>
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|
|
@ -25,18 +25,6 @@
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<scope>provided</scope>
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<scope>provided</scope>
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</dependency>
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</dependency>
|
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|
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<!-- At least one "structures" JAR must also be included -->
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|
||||||
<dependency>
|
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
||||||
<artifactId>hapi-fhir-structures-dstu</artifactId>
|
|
||||||
<version>${project.version}</version>
|
|
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</dependency>
|
|
||||||
<dependency>
|
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
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<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
|
||||||
<version>${project.version}</version>
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|
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</dependency>
|
|
||||||
|
|
||||||
<!-- This dependency includes the JPA server itself, which is packaged separately from the rest of HAPI FHIR -->
|
<!-- This dependency includes the JPA server itself, which is packaged separately from the rest of HAPI FHIR -->
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
|
|
|
@ -21,11 +21,6 @@
|
||||||
<artifactId>hapi-fhir-base</artifactId>
|
<artifactId>hapi-fhir-base</artifactId>
|
||||||
<version>${project.version}</version>
|
<version>${project.version}</version>
|
||||||
</dependency>
|
</dependency>
|
||||||
<dependency>
|
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
||||||
<artifactId>hapi-fhir-structures-dstu</artifactId>
|
|
||||||
<version>${project.version}</version>
|
|
||||||
</dependency>
|
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
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|
@ -264,6 +259,8 @@
|
||||||
<directory>${basedir}/..</directory>
|
<directory>${basedir}/..</directory>
|
||||||
<includes>
|
<includes>
|
||||||
<include>hapi-fhir-base/target/jacoco.exec</include>
|
<include>hapi-fhir-base/target/jacoco.exec</include>
|
||||||
|
<include>hapi-fhir-client/target/jacoco.exec</include>
|
||||||
|
<include>hapi-fhir-server/target/jacoco.exec</include>
|
||||||
<include>hapi-fhir-structures-dstu/target/jacoco.exec</include>
|
<include>hapi-fhir-structures-dstu/target/jacoco.exec</include>
|
||||||
<include>hapi-fhir-structures-dstu2/target/jacoco.exec</include>
|
<include>hapi-fhir-structures-dstu2/target/jacoco.exec</include>
|
||||||
<include>hapi-fhir-structures-hl7org-dstu2/target/jacoco.exec</include>
|
<include>hapi-fhir-structures-hl7org-dstu2/target/jacoco.exec</include>
|
||||||
|
@ -287,6 +284,8 @@
|
||||||
<serviceJobId>${env.TRAVIS_JOB_ID}</serviceJobId>
|
<serviceJobId>${env.TRAVIS_JOB_ID}</serviceJobId>
|
||||||
<sourceDirectories>
|
<sourceDirectories>
|
||||||
<sourceDirectory>../hapi-fhir-base/src/main/java</sourceDirectory>
|
<sourceDirectory>../hapi-fhir-base/src/main/java</sourceDirectory>
|
||||||
|
<sourceDirectory>../hapi-fhir-client/src/main/java</sourceDirectory>
|
||||||
|
<sourceDirectory>../hapi-fhir-server/src/main/java</sourceDirectory>
|
||||||
<sourceDirectory>../hapi-fhir-structures-dstu/src/test/java</sourceDirectory>
|
<sourceDirectory>../hapi-fhir-structures-dstu/src/test/java</sourceDirectory>
|
||||||
<sourceDirectory>../hapi-fhir-structures-dstu2/src/test/java</sourceDirectory>
|
<sourceDirectory>../hapi-fhir-structures-dstu2/src/test/java</sourceDirectory>
|
||||||
<sourceDirectory>../hapi-fhir-structures-hl7org-dstu2/src/test/java</sourceDirectory>
|
<sourceDirectory>../hapi-fhir-structures-hl7org-dstu2/src/test/java</sourceDirectory>
|
||||||
|
@ -309,6 +308,8 @@
|
||||||
<configuration>
|
<configuration>
|
||||||
<sources>
|
<sources>
|
||||||
<source>../hapi-fhir-base/src/main/java</source>
|
<source>../hapi-fhir-base/src/main/java</source>
|
||||||
|
<source>../hapi-fhir-client/src/main/java</source>
|
||||||
|
<source>../hapi-fhir-server/src/main/java</source>
|
||||||
<source>../hapi-fhir-jpaserver-base/src/main/java</source>
|
<source>../hapi-fhir-jpaserver-base/src/main/java</source>
|
||||||
</sources>
|
</sources>
|
||||||
</configuration>
|
</configuration>
|
||||||
|
|
|
@ -64,11 +64,6 @@
|
||||||
<artifactId>hapi-fhir-server</artifactId>
|
<artifactId>hapi-fhir-server</artifactId>
|
||||||
<version>${project.version}</version>
|
<version>${project.version}</version>
|
||||||
</dependency>
|
</dependency>
|
||||||
<dependency>
|
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
||||||
<artifactId>hapi-fhir-structures-dstu</artifactId>
|
|
||||||
<version>${project.version}</version>
|
|
||||||
</dependency>
|
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
||||||
|
@ -563,11 +558,6 @@
|
||||||
</execution>
|
</execution>
|
||||||
</executions>
|
</executions>
|
||||||
<dependencies>
|
<dependencies>
|
||||||
<dependency>
|
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
||||||
<artifactId>hapi-fhir-structures-dstu</artifactId>
|
|
||||||
<version>${project.version}</version>
|
|
||||||
</dependency>
|
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
||||||
|
|
|
@ -1,6 +1,5 @@
|
||||||
package ca.uhn.fhir.jpa.dao;
|
package ca.uhn.fhir.jpa.dao;
|
||||||
|
|
||||||
import static org.apache.commons.lang3.StringUtils.defaultIfBlank;
|
|
||||||
/*
|
/*
|
||||||
* #%L
|
* #%L
|
||||||
* HAPI FHIR JPA Server
|
* HAPI FHIR JPA Server
|
||||||
|
@ -20,9 +19,7 @@ import static org.apache.commons.lang3.StringUtils.defaultIfBlank;
|
||||||
* limitations under the License.
|
* limitations under the License.
|
||||||
* #L%
|
* #L%
|
||||||
*/
|
*/
|
||||||
import static org.apache.commons.lang3.StringUtils.isBlank;
|
import static org.apache.commons.lang3.StringUtils.*;
|
||||||
import static org.apache.commons.lang3.StringUtils.isNotBlank;
|
|
||||||
import static org.apache.commons.lang3.StringUtils.trim;
|
|
||||||
|
|
||||||
import java.io.UnsupportedEncodingException;
|
import java.io.UnsupportedEncodingException;
|
||||||
import java.text.Normalizer;
|
import java.text.Normalizer;
|
||||||
|
@ -37,9 +34,8 @@ import javax.xml.stream.events.XMLEvent;
|
||||||
import org.apache.commons.lang3.*;
|
import org.apache.commons.lang3.*;
|
||||||
import org.apache.http.NameValuePair;
|
import org.apache.http.NameValuePair;
|
||||||
import org.apache.http.client.utils.URLEncodedUtils;
|
import org.apache.http.client.utils.URLEncodedUtils;
|
||||||
|
import org.hl7.fhir.dstu3.model.*;
|
||||||
import org.hl7.fhir.dstu3.model.Bundle.HTTPVerb;
|
import org.hl7.fhir.dstu3.model.Bundle.HTTPVerb;
|
||||||
import org.hl7.fhir.dstu3.model.IdType;
|
|
||||||
import org.hl7.fhir.dstu3.model.StringType;
|
|
||||||
import org.hl7.fhir.instance.model.api.*;
|
import org.hl7.fhir.instance.model.api.*;
|
||||||
import org.springframework.beans.factory.annotation.Autowired;
|
import org.springframework.beans.factory.annotation.Autowired;
|
||||||
import org.springframework.transaction.PlatformTransactionManager;
|
import org.springframework.transaction.PlatformTransactionManager;
|
||||||
|
@ -61,17 +57,16 @@ import ca.uhn.fhir.jpa.util.DeleteConflict;
|
||||||
import ca.uhn.fhir.model.api.*;
|
import ca.uhn.fhir.model.api.*;
|
||||||
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
|
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
|
||||||
import ca.uhn.fhir.model.base.composite.BaseResourceReferenceDt;
|
import ca.uhn.fhir.model.base.composite.BaseResourceReferenceDt;
|
||||||
import ca.uhn.fhir.model.dstu.resource.BaseResource;
|
|
||||||
import ca.uhn.fhir.model.primitive.*;
|
import ca.uhn.fhir.model.primitive.*;
|
||||||
import ca.uhn.fhir.model.valueset.BundleEntryTransactionMethodEnum;
|
import ca.uhn.fhir.model.valueset.BundleEntryTransactionMethodEnum;
|
||||||
import ca.uhn.fhir.parser.*;
|
import ca.uhn.fhir.parser.*;
|
||||||
import ca.uhn.fhir.rest.api.*;
|
import ca.uhn.fhir.rest.api.*;
|
||||||
|
import ca.uhn.fhir.rest.api.Constants;
|
||||||
import ca.uhn.fhir.rest.api.server.IBundleProvider;
|
import ca.uhn.fhir.rest.api.server.IBundleProvider;
|
||||||
import ca.uhn.fhir.rest.param.*;
|
import ca.uhn.fhir.rest.param.*;
|
||||||
import ca.uhn.fhir.rest.server.exceptions.*;
|
import ca.uhn.fhir.rest.server.exceptions.*;
|
||||||
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;
|
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor;
|
||||||
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
|
import ca.uhn.fhir.rest.server.interceptor.IServerInterceptor.ActionRequestDetails;
|
||||||
import ca.uhn.fhir.rest.server.method.MethodUtil;
|
|
||||||
import ca.uhn.fhir.rest.server.servlet.ServletRequestDetails;
|
import ca.uhn.fhir.rest.server.servlet.ServletRequestDetails;
|
||||||
import ca.uhn.fhir.util.*;
|
import ca.uhn.fhir.util.*;
|
||||||
|
|
||||||
|
|
|
@ -36,6 +36,7 @@ import org.hibernate.search.jpa.FullTextEntityManager;
|
||||||
import org.hibernate.search.jpa.FullTextQuery;
|
import org.hibernate.search.jpa.FullTextQuery;
|
||||||
import org.hibernate.search.query.dsl.BooleanJunction;
|
import org.hibernate.search.query.dsl.BooleanJunction;
|
||||||
import org.hibernate.search.query.dsl.QueryBuilder;
|
import org.hibernate.search.query.dsl.QueryBuilder;
|
||||||
|
import org.hl7.fhir.dstu3.model.BaseResource;
|
||||||
import org.hl7.fhir.instance.model.api.IBaseResource;
|
import org.hl7.fhir.instance.model.api.IBaseResource;
|
||||||
import org.springframework.transaction.annotation.Transactional;
|
import org.springframework.transaction.annotation.Transactional;
|
||||||
|
|
||||||
|
@ -44,7 +45,6 @@ import com.google.common.collect.Sets;
|
||||||
|
|
||||||
import ca.uhn.fhir.jpa.entity.ResourceTable;
|
import ca.uhn.fhir.jpa.entity.ResourceTable;
|
||||||
import ca.uhn.fhir.model.api.IQueryParameterType;
|
import ca.uhn.fhir.model.api.IQueryParameterType;
|
||||||
import ca.uhn.fhir.model.dstu.resource.BaseResource;
|
|
||||||
import ca.uhn.fhir.rest.api.Constants;
|
import ca.uhn.fhir.rest.api.Constants;
|
||||||
import ca.uhn.fhir.rest.param.StringParam;
|
import ca.uhn.fhir.rest.param.StringParam;
|
||||||
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
|
import ca.uhn.fhir.rest.server.exceptions.InternalErrorException;
|
||||||
|
|
|
@ -38,6 +38,7 @@ import org.apache.commons.lang3.tuple.Pair;
|
||||||
import org.hibernate.ScrollMode;
|
import org.hibernate.ScrollMode;
|
||||||
import org.hibernate.ScrollableResults;
|
import org.hibernate.ScrollableResults;
|
||||||
import org.hibernate.query.Query;
|
import org.hibernate.query.Query;
|
||||||
|
import org.hl7.fhir.dstu3.model.BaseResource;
|
||||||
import org.hl7.fhir.instance.model.api.*;
|
import org.hl7.fhir.instance.model.api.*;
|
||||||
|
|
||||||
import com.google.common.collect.*;
|
import com.google.common.collect.*;
|
||||||
|
@ -51,7 +52,6 @@ import ca.uhn.fhir.jpa.term.VersionIndependentConcept;
|
||||||
import ca.uhn.fhir.jpa.util.StopWatch;
|
import ca.uhn.fhir.jpa.util.StopWatch;
|
||||||
import ca.uhn.fhir.model.api.*;
|
import ca.uhn.fhir.model.api.*;
|
||||||
import ca.uhn.fhir.model.base.composite.*;
|
import ca.uhn.fhir.model.base.composite.*;
|
||||||
import ca.uhn.fhir.model.dstu.resource.BaseResource;
|
|
||||||
import ca.uhn.fhir.model.primitive.IdDt;
|
import ca.uhn.fhir.model.primitive.IdDt;
|
||||||
import ca.uhn.fhir.model.primitive.InstantDt;
|
import ca.uhn.fhir.model.primitive.InstantDt;
|
||||||
import ca.uhn.fhir.model.valueset.BundleEntrySearchModeEnum;
|
import ca.uhn.fhir.model.valueset.BundleEntrySearchModeEnum;
|
||||||
|
|
|
@ -22,7 +22,6 @@ import ca.uhn.fhir.jpa.dao.data.ISearchParamPresentDao;
|
||||||
import ca.uhn.fhir.jpa.entity.*;
|
import ca.uhn.fhir.jpa.entity.*;
|
||||||
import ca.uhn.fhir.model.api.*;
|
import ca.uhn.fhir.model.api.*;
|
||||||
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
|
import ca.uhn.fhir.model.base.composite.BaseCodingDt;
|
||||||
import ca.uhn.fhir.model.dstu.resource.BaseResource;
|
|
||||||
import ca.uhn.fhir.model.dstu2.composite.*;
|
import ca.uhn.fhir.model.dstu2.composite.*;
|
||||||
import ca.uhn.fhir.model.dstu2.resource.*;
|
import ca.uhn.fhir.model.dstu2.resource.*;
|
||||||
import ca.uhn.fhir.model.dstu2.valueset.*;
|
import ca.uhn.fhir.model.dstu2.valueset.*;
|
||||||
|
|
|
@ -351,13 +351,13 @@ public class FhirResourceDaoDstu2Test extends BaseJpaDstu2Test {
|
||||||
* be fixed.
|
* be fixed.
|
||||||
*/
|
*/
|
||||||
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu.valueset.IssueSeverityEnum.ERROR.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum.ERROR.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
assertEquals(ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum.ERROR.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
||||||
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu.valueset.IssueSeverityEnum.INFORMATION.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum.INFORMATION.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
assertEquals(ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum.INFORMATION.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
||||||
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu.valueset.IssueSeverityEnum.WARNING.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum.WARNING.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
assertEquals(ca.uhn.fhir.model.dstu2.valueset.IssueSeverityEnum.WARNING.getCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
|
@ -503,27 +503,6 @@ public class FhirResourceDaoDstu3Test extends BaseJpaDstu3Test {
|
||||||
obs = myObservationDao.read(obsId.toUnqualifiedVersionless(), mySrd);
|
obs = myObservationDao.read(obsId.toUnqualifiedVersionless(), mySrd);
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
|
||||||
public void testCreateDuplicateIdFails() {
|
|
||||||
String methodName = "testCreateDuplocateIdFailsText";
|
|
||||||
|
|
||||||
Patient p = new Patient();
|
|
||||||
p.addIdentifier().setSystem("urn:system").setValue(methodName);
|
|
||||||
p.setId("Patient/" + methodName);
|
|
||||||
IIdType id = myPatientDao.create(p, mySrd).getId();
|
|
||||||
ourLog.info("Created patient, got it: {}", id);
|
|
||||||
|
|
||||||
p = new Patient();
|
|
||||||
p.addIdentifier().setSystem("urn:system").setValue(methodName);
|
|
||||||
p.addName().setFamily("Hello");
|
|
||||||
p.setId("Patient/" + methodName);
|
|
||||||
try {
|
|
||||||
myPatientDao.create(p, mySrd);
|
|
||||||
fail();
|
|
||||||
} catch (UnprocessableEntityException e) {
|
|
||||||
assertThat(e.getMessage(), containsString("Can not create entity with ID[" + methodName + "], a resource with this ID already exists"));
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
public void testCreateDuplicateTagsDoesNotCauseDuplicates() {
|
public void testCreateDuplicateTagsDoesNotCauseDuplicates() {
|
||||||
|
@ -608,9 +587,9 @@ public class FhirResourceDaoDstu3Test extends BaseJpaDstu3Test {
|
||||||
Patient p = new Patient();
|
Patient p = new Patient();
|
||||||
p.addIdentifier().setSystem("urn:system").setValue("testCreateNumericIdFails");
|
p.addIdentifier().setSystem("urn:system").setValue("testCreateNumericIdFails");
|
||||||
p.addName().setFamily("Hello");
|
p.addName().setFamily("Hello");
|
||||||
p.setId("Patient/123");
|
p.setId("Patient/9999999999999");
|
||||||
try {
|
try {
|
||||||
myPatientDao.create(p, mySrd);
|
myPatientDao.update(p, mySrd);
|
||||||
fail();
|
fail();
|
||||||
} catch (InvalidRequestException e) {
|
} catch (InvalidRequestException e) {
|
||||||
assertThat(e.getMessage(), containsString("clients may only assign IDs which contain at least one non-numeric"));
|
assertThat(e.getMessage(), containsString("clients may only assign IDs which contain at least one non-numeric"));
|
||||||
|
@ -624,13 +603,13 @@ public class FhirResourceDaoDstu3Test extends BaseJpaDstu3Test {
|
||||||
* be fixed.
|
* be fixed.
|
||||||
*/
|
*/
|
||||||
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirDao.OO_SEVERITY_ERROR);
|
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirDao.OO_SEVERITY_ERROR);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu.valueset.IssueSeverityEnum.ERROR.getCode(), BaseHapiFhirDao.OO_SEVERITY_ERROR);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_ERROR);
|
||||||
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirDao.OO_SEVERITY_ERROR);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.ERROR.toCode(), BaseHapiFhirDao.OO_SEVERITY_ERROR);
|
||||||
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirDao.OO_SEVERITY_INFO);
|
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirDao.OO_SEVERITY_INFO);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu.valueset.IssueSeverityEnum.INFORMATION.getCode(), BaseHapiFhirDao.OO_SEVERITY_INFO);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_INFO);
|
||||||
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirDao.OO_SEVERITY_INFO);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.INFORMATION.toCode(), BaseHapiFhirDao.OO_SEVERITY_INFO);
|
||||||
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirDao.OO_SEVERITY_WARN);
|
assertEquals(org.hl7.fhir.instance.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirDao.OO_SEVERITY_WARN);
|
||||||
assertEquals(ca.uhn.fhir.model.dstu.valueset.IssueSeverityEnum.WARNING.getCode(), BaseHapiFhirDao.OO_SEVERITY_WARN);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirResourceDao.OO_SEVERITY_WARN);
|
||||||
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirDao.OO_SEVERITY_WARN);
|
assertEquals(org.hl7.fhir.dstu3.model.OperationOutcome.IssueSeverity.WARNING.toCode(), BaseHapiFhirDao.OO_SEVERITY_WARN);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@ -3563,7 +3542,7 @@ public class FhirResourceDaoDstu3Test extends BaseJpaDstu3Test {
|
||||||
p1.addIdentifier().setSystem("urn:system").setValue("testUpdateRejectsIdWhichPointsToForcedId01");
|
p1.addIdentifier().setSystem("urn:system").setValue("testUpdateRejectsIdWhichPointsToForcedId01");
|
||||||
p1.addName().setFamily("Tester").addGiven("testUpdateRejectsIdWhichPointsToForcedId01");
|
p1.addName().setFamily("Tester").addGiven("testUpdateRejectsIdWhichPointsToForcedId01");
|
||||||
p1.setId("ABABA");
|
p1.setId("ABABA");
|
||||||
IIdType p1id = myPatientDao.create(p1, mySrd).getId();
|
IIdType p1id = myPatientDao.update(p1, mySrd).getId();
|
||||||
assertEquals("ABABA", p1id.getIdPart());
|
assertEquals("ABABA", p1id.getIdPart());
|
||||||
|
|
||||||
Patient p2 = new Patient();
|
Patient p2 = new Patient();
|
||||||
|
|
|
@ -25,11 +25,6 @@
|
||||||
<artifactId>hapi-fhir-jpaserver-base</artifactId>
|
<artifactId>hapi-fhir-jpaserver-base</artifactId>
|
||||||
<version>${project.version}</version>
|
<version>${project.version}</version>
|
||||||
</dependency>
|
</dependency>
|
||||||
<dependency>
|
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
|
||||||
<artifactId>hapi-fhir-structures-dstu</artifactId>
|
|
||||||
<version>${project.version}</version>
|
|
||||||
</dependency>
|
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
<artifactId>hapi-fhir-structures-dstu2</artifactId>
|
||||||
|
|
|
@ -1,26 +0,0 @@
|
||||||
package ca.uhn.fhirtest;
|
|
||||||
|
|
||||||
import ca.uhn.fhir.model.dstu.resource.Profile;
|
|
||||||
import ca.uhn.fhir.model.dstu.resource.Profile.ExtensionDefn;
|
|
||||||
import ca.uhn.fhir.model.dstu.valueset.DataTypeEnum;
|
|
||||||
import ca.uhn.fhir.model.dstu.valueset.ExtensionContextEnum;
|
|
||||||
|
|
||||||
public class PopulateProfiles {
|
|
||||||
|
|
||||||
public static void main(String[] args) {
|
|
||||||
|
|
||||||
Profile hapiExtensions = new Profile();
|
|
||||||
|
|
||||||
ExtensionDefn ext = hapiExtensions.addExtensionDefn();
|
|
||||||
ext.addContext("Conformance.rest.resource");
|
|
||||||
ext.getCode().setValue("resourceCount");
|
|
||||||
ext.getContextType().setValueAsEnum(ExtensionContextEnum.RESOURCE);
|
|
||||||
ext.getDisplay().setValue("Resource count on server");
|
|
||||||
ext.getDefinition().addType().setCode(DataTypeEnum.DECIMAL);
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
|
@ -150,25 +150,24 @@ public abstract class BaseResourceReturningMethodBinding extends BaseMethodBindi
|
||||||
|
|
||||||
return theRequest.getResponse().streamResponseAsResource(response, prettyPrint, summaryMode, Constants.STATUS_HTTP_200_OK, null, theRequest.isRespondGzip(), isAddContentLocationHeader());
|
return theRequest.getResponse().streamResponseAsResource(response, prettyPrint, summaryMode, Constants.STATUS_HTTP_200_OK, null, theRequest.isRespondGzip(), isAddContentLocationHeader());
|
||||||
|
|
||||||
|
|
||||||
// DSTU1 Bundle
|
// DSTU1 Bundle
|
||||||
// // Is this request coming from a browser
|
// // Is this request coming from a browser
|
||||||
// String uaHeader = theRequest.getHeader("user-agent");
|
// String uaHeader = theRequest.getHeader("user-agent");
|
||||||
// boolean requestIsBrowser = false;
|
// boolean requestIsBrowser = false;
|
||||||
// if (uaHeader != null && uaHeader.contains("Mozilla")) {
|
// if (uaHeader != null && uaHeader.contains("Mozilla")) {
|
||||||
// requestIsBrowser = true;
|
// requestIsBrowser = true;
|
||||||
// }
|
// }
|
||||||
//
|
//
|
||||||
// for (int i = theServer.getInterceptors().size() - 1; i >= 0; i--) {
|
// for (int i = theServer.getInterceptors().size() - 1; i >= 0; i--) {
|
||||||
// IServerInterceptor next = theServer.getInterceptors().get(i);
|
// IServerInterceptor next = theServer.getInterceptors().get(i);
|
||||||
// boolean continueProcessing = next.outgoingResponse(theRequest, responseObject.getDstu1Bundle());
|
// boolean continueProcessing = next.outgoingResponse(theRequest, responseObject.getDstu1Bundle());
|
||||||
// if (!continueProcessing) {
|
// if (!continueProcessing) {
|
||||||
// ourLog.debug("Interceptor {} returned false, not continuing processing");
|
// ourLog.debug("Interceptor {} returned false, not continuing processing");
|
||||||
// return null;
|
// return null;
|
||||||
// }
|
// }
|
||||||
// }
|
// }
|
||||||
//
|
//
|
||||||
// return theRequest.getResponse().streamResponseAsBundle(responseObject.getDstu1Bundle(), summaryMode, theRequest.isRespondGzip(), requestIsBrowser);
|
// return theRequest.getResponse().streamResponseAsBundle(responseObject.getDstu1Bundle(), summaryMode, theRequest.isRespondGzip(), requestIsBrowser);
|
||||||
}
|
}
|
||||||
|
|
||||||
public IBaseResource doInvokeServer(IRestfulServer<?> theServer, RequestDetails theRequest) {
|
public IBaseResource doInvokeServer(IRestfulServer<?> theServer, RequestDetails theRequest) {
|
||||||
|
@ -287,7 +286,8 @@ public abstract class BaseResourceReturningMethodBinding extends BaseMethodBindi
|
||||||
return responseObject;
|
return responseObject;
|
||||||
}
|
}
|
||||||
|
|
||||||
protected IBaseResource createBundleFromBundleProvider(IRestfulServer<?> theServer, RequestDetails theRequest, Integer theLimit, String theLinkSelf, Set<Include> theIncludes, IBundleProvider theResult, int theOffset, BundleTypeEnum theBundleType, EncodingEnum theLinkEncoding, String theSearchId) {
|
protected IBaseResource createBundleFromBundleProvider(IRestfulServer<?> theServer, RequestDetails theRequest, Integer theLimit, String theLinkSelf, Set<Include> theIncludes,
|
||||||
|
IBundleProvider theResult, int theOffset, BundleTypeEnum theBundleType, EncodingEnum theLinkEncoding, String theSearchId) {
|
||||||
IVersionSpecificBundleFactory bundleFactory = theServer.getFhirContext().newBundleFactory();
|
IVersionSpecificBundleFactory bundleFactory = theServer.getFhirContext().newBundleFactory();
|
||||||
|
|
||||||
int numToReturn;
|
int numToReturn;
|
||||||
|
@ -345,7 +345,7 @@ public abstract class BaseResourceReturningMethodBinding extends BaseMethodBindi
|
||||||
String serverBase = theRequest.getFhirServerBase();
|
String serverBase = theRequest.getFhirServerBase();
|
||||||
boolean prettyPrint = RestfulServerUtils.prettyPrintResponse(theServer, theRequest);
|
boolean prettyPrint = RestfulServerUtils.prettyPrintResponse(theServer, theRequest);
|
||||||
|
|
||||||
String linkPrev= null;
|
String linkPrev = null;
|
||||||
String linkNext = null;
|
String linkNext = null;
|
||||||
if (searchId != null) {
|
if (searchId != null) {
|
||||||
if (numTotalResults == null || theOffset + numToReturn < numTotalResults) {
|
if (numTotalResults == null || theOffset + numToReturn < numTotalResults) {
|
||||||
|
@ -357,8 +357,6 @@ public abstract class BaseResourceReturningMethodBinding extends BaseMethodBindi
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
bundleFactory.addRootPropertiesToBundle(null, serverBase, theLinkSelf, linkPrev, linkNext, theResult.size(), theBundleType, theResult.getPublished());
|
bundleFactory.addRootPropertiesToBundle(null, serverBase, theLinkSelf, linkPrev, linkNext, theResult.size(), theBundleType, theResult.getPublished());
|
||||||
bundleFactory.addResourcesToBundle(new ArrayList<IBaseResource>(resourceList), theBundleType, serverBase, theServer.getBundleInclusionRule(), theIncludes);
|
bundleFactory.addResourcesToBundle(new ArrayList<IBaseResource>(resourceList), theBundleType, serverBase, theServer.getBundleInclusionRule(), theIncludes);
|
||||||
|
|
||||||
|
@ -371,12 +369,6 @@ public abstract class BaseResourceReturningMethodBinding extends BaseMethodBindi
|
||||||
|
|
||||||
return bundleFactory.getResourceBundle();
|
return bundleFactory.getResourceBundle();
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
public abstract Object invokeServer(IRestfulServer<?> theServer, RequestDetails theRequest, Object[] theMethodParams) throws InvalidRequestException, InternalErrorException;
|
public abstract Object invokeServer(IRestfulServer<?> theServer, RequestDetails theRequest, Object[] theMethodParams) throws InvalidRequestException, InternalErrorException;
|
||||||
|
@ -393,12 +385,17 @@ public abstract class BaseResourceReturningMethodBinding extends BaseMethodBindi
|
||||||
}
|
}
|
||||||
|
|
||||||
public enum MethodReturnTypeEnum {
|
public enum MethodReturnTypeEnum {
|
||||||
BUNDLE, BUNDLE_PROVIDER, BUNDLE_RESOURCE, LIST_OF_RESOURCES, METHOD_OUTCOME, RESOURCE
|
BUNDLE,
|
||||||
|
BUNDLE_PROVIDER,
|
||||||
|
BUNDLE_RESOURCE,
|
||||||
|
LIST_OF_RESOURCES,
|
||||||
|
METHOD_OUTCOME,
|
||||||
|
RESOURCE
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
public enum ReturnTypeEnum {
|
public enum ReturnTypeEnum {
|
||||||
BUNDLE, RESOURCE
|
BUNDLE,
|
||||||
|
RESOURCE
|
||||||
}
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
|
@ -72,6 +72,11 @@ public class PatchMethodBinding extends BaseOutcomeReturningMethodBindingWithRes
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Override
|
||||||
|
protected boolean allowVoidReturnType() {
|
||||||
|
return true;
|
||||||
|
}
|
||||||
|
|
||||||
@Override
|
@Override
|
||||||
public boolean incomingServerRequestMatchesMethod(RequestDetails theRequest) {
|
public boolean incomingServerRequestMatchesMethod(RequestDetails theRequest) {
|
||||||
boolean retVal = super.incomingServerRequestMatchesMethod(theRequest);
|
boolean retVal = super.incomingServerRequestMatchesMethod(theRequest);
|
||||||
|
|
|
@ -108,6 +108,23 @@ public class ServletRequestDetails extends RequestDetails {
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@Override
|
||||||
|
public Charset getCharset() {
|
||||||
|
Charset charset = null;
|
||||||
|
|
||||||
|
String charsetString = myServletRequest.getCharacterEncoding();
|
||||||
|
if (isNotBlank(charsetString)) {
|
||||||
|
charset = Charset.forName(charsetString);
|
||||||
|
}
|
||||||
|
|
||||||
|
return charset;
|
||||||
|
}
|
||||||
|
|
||||||
|
@Override
|
||||||
|
public FhirContext getFhirContext() {
|
||||||
|
return getServer().getFhirContext();
|
||||||
|
}
|
||||||
|
|
||||||
@Override
|
@Override
|
||||||
public String getHeader(String name) {
|
public String getHeader(String name) {
|
||||||
return getServletRequest().getHeader(name);
|
return getServletRequest().getHeader(name);
|
||||||
|
@ -159,28 +176,4 @@ public class ServletRequestDetails extends RequestDetails {
|
||||||
this.myServletResponse = myServletResponse;
|
this.myServletResponse = myServletResponse;
|
||||||
}
|
}
|
||||||
|
|
||||||
@Override
|
|
||||||
public Charset getCharset() {
|
|
||||||
Charset charset = null;
|
|
||||||
|
|
||||||
String charsetString = myServletResponse.getCharacterEncoding();
|
|
||||||
if (isNotBlank(charsetString)) {
|
|
||||||
charset = Charset.forName(charsetString);
|
|
||||||
}
|
|
||||||
|
|
||||||
// String ct = getHeader(Constants.HEADER_CONTENT_TYPE);
|
|
||||||
//
|
|
||||||
// if (isNotBlank(ct)) {
|
|
||||||
// ContentType parsedCt = ContentType.parse(ct);
|
|
||||||
// charset = parsedCt.getCharset();
|
|
||||||
// }
|
|
||||||
|
|
||||||
return charset;
|
|
||||||
}
|
|
||||||
|
|
||||||
@Override
|
|
||||||
public FhirContext getFhirContext() {
|
|
||||||
return getServer().getFhirContext();
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
|
@ -221,10 +221,14 @@
|
||||||
<classFolders>
|
<classFolders>
|
||||||
<classFolder>${basedir}/target/classes</classFolder>
|
<classFolder>${basedir}/target/classes</classFolder>
|
||||||
<classFolder>${basedir}/../hapi-fhir-base/target/classes</classFolder>
|
<classFolder>${basedir}/../hapi-fhir-base/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-client/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-server/target/classes</classFolder>
|
||||||
</classFolders>
|
</classFolders>
|
||||||
<sourceFolders>
|
<sourceFolders>
|
||||||
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
||||||
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-client/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-server/src/main/java</sourceFolder>
|
||||||
</sourceFolders>
|
</sourceFolders>
|
||||||
<dumpOnExit>true</dumpOnExit>
|
<dumpOnExit>true</dumpOnExit>
|
||||||
</configuration>
|
</configuration>
|
||||||
|
|
|
@ -185,10 +185,14 @@
|
||||||
<classFolders>
|
<classFolders>
|
||||||
<classFolder>${basedir}/target/classes</classFolder>
|
<classFolder>${basedir}/target/classes</classFolder>
|
||||||
<classFolder>${basedir}/../hapi-fhir-base/target/classes</classFolder>
|
<classFolder>${basedir}/../hapi-fhir-base/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-client/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-server/target/classes</classFolder>
|
||||||
</classFolders>
|
</classFolders>
|
||||||
<sourceFolders>
|
<sourceFolders>
|
||||||
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
||||||
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-client/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-server/src/main/java</sourceFolder>
|
||||||
</sourceFolders>
|
</sourceFolders>
|
||||||
<dumpOnExit>true</dumpOnExit>
|
<dumpOnExit>true</dumpOnExit>
|
||||||
</configuration>
|
</configuration>
|
||||||
|
|
|
@ -213,10 +213,14 @@
|
||||||
<classFolders>
|
<classFolders>
|
||||||
<classFolder>${basedir}/target/classes</classFolder>
|
<classFolder>${basedir}/target/classes</classFolder>
|
||||||
<classFolder>${basedir}/../hapi-fhir-base/target/classes</classFolder>
|
<classFolder>${basedir}/../hapi-fhir-base/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-client/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-server/target/classes</classFolder>
|
||||||
</classFolders>
|
</classFolders>
|
||||||
<sourceFolders>
|
<sourceFolders>
|
||||||
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
||||||
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-client/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-server/src/main/java</sourceFolder>
|
||||||
</sourceFolders>
|
</sourceFolders>
|
||||||
<dumpOnExit>true</dumpOnExit>
|
<dumpOnExit>true</dumpOnExit>
|
||||||
</configuration>
|
</configuration>
|
||||||
|
|
|
@ -220,10 +220,14 @@
|
||||||
<classFolders>
|
<classFolders>
|
||||||
<classFolder>${basedir}/target/classes</classFolder>
|
<classFolder>${basedir}/target/classes</classFolder>
|
||||||
<classFolder>${basedir}../hapi-fhir-base/target/classes</classFolder>
|
<classFolder>${basedir}../hapi-fhir-base/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-client/target/classes</classFolder>
|
||||||
|
<classFolder>${basedir}/../hapi-fhir-server/target/classes</classFolder>
|
||||||
</classFolders>
|
</classFolders>
|
||||||
<sourceFolders>
|
<sourceFolders>
|
||||||
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/src/main/java</sourceFolder>
|
||||||
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
<sourceFolder>${basedir}/../hapi-fhir-base/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-client/src/main/java</sourceFolder>
|
||||||
|
<sourceFolder>${basedir}/../hapi-fhir-server/src/main/java</sourceFolder>
|
||||||
</sourceFolders>
|
</sourceFolders>
|
||||||
<dumpOnExit>true</dumpOnExit>
|
<dumpOnExit>true</dumpOnExit>
|
||||||
</configuration>
|
</configuration>
|
||||||
|
|
|
@ -36,14 +36,14 @@
|
||||||
</dependency>
|
</dependency>
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-jpaserver-base</artifactId>
|
<artifactId>hapi-fhir-server</artifactId>
|
||||||
<version>${project.version}</version>
|
<version>${project.version}</version>
|
||||||
<scope>test</scope>
|
|
||||||
</dependency>
|
</dependency>
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
<artifactId>hapi-fhir-structures-dstu</artifactId>
|
<artifactId>hapi-fhir-jpaserver-base</artifactId>
|
||||||
<version>${project.version}</version>
|
<version>${project.version}</version>
|
||||||
|
<scope>test</scope>
|
||||||
</dependency>
|
</dependency>
|
||||||
<dependency>
|
<dependency>
|
||||||
<groupId>ca.uhn.hapi.fhir</groupId>
|
<groupId>ca.uhn.hapi.fhir</groupId>
|
||||||
|
|
|
@ -29,8 +29,6 @@ import ca.uhn.fhir.context.*;
|
||||||
import ca.uhn.fhir.model.api.Bundle;
|
import ca.uhn.fhir.model.api.Bundle;
|
||||||
import ca.uhn.fhir.model.api.ExtensionDt;
|
import ca.uhn.fhir.model.api.ExtensionDt;
|
||||||
import ca.uhn.fhir.model.api.IResource;
|
import ca.uhn.fhir.model.api.IResource;
|
||||||
import ca.uhn.fhir.model.dstu.resource.Conformance;
|
|
||||||
import ca.uhn.fhir.model.dstu.resource.Conformance.Rest;
|
|
||||||
import ca.uhn.fhir.model.primitive.DecimalDt;
|
import ca.uhn.fhir.model.primitive.DecimalDt;
|
||||||
import ca.uhn.fhir.rest.api.Constants;
|
import ca.uhn.fhir.rest.api.Constants;
|
||||||
import ca.uhn.fhir.rest.api.EncodingEnum;
|
import ca.uhn.fhir.rest.api.EncodingEnum;
|
||||||
|
@ -295,8 +293,6 @@ public class BaseController {
|
||||||
|
|
||||||
private IBaseResource loadAndAddConf(HttpServletRequest theServletRequest, final HomeRequest theRequest, final ModelMap theModel) {
|
private IBaseResource loadAndAddConf(HttpServletRequest theServletRequest, final HomeRequest theRequest, final ModelMap theModel) {
|
||||||
switch (theRequest.getFhirVersion(myConfig)) {
|
switch (theRequest.getFhirVersion(myConfig)) {
|
||||||
case DSTU1:
|
|
||||||
return loadAndAddConfDstu1(theServletRequest, theRequest, theModel);
|
|
||||||
case DSTU2:
|
case DSTU2:
|
||||||
return loadAndAddConfDstu2(theServletRequest, theRequest, theModel);
|
return loadAndAddConfDstu2(theServletRequest, theRequest, theModel);
|
||||||
case DSTU3:
|
case DSTU3:
|
||||||
|
@ -308,65 +304,6 @@ public class BaseController {
|
||||||
throw new IllegalStateException("Unknown version: " + theRequest.getFhirVersion(myConfig));
|
throw new IllegalStateException("Unknown version: " + theRequest.getFhirVersion(myConfig));
|
||||||
}
|
}
|
||||||
|
|
||||||
private Conformance loadAndAddConfDstu1(HttpServletRequest theServletRequest, final HomeRequest theRequest, final ModelMap theModel) {
|
|
||||||
CaptureInterceptor interceptor = new CaptureInterceptor();
|
|
||||||
GenericClient client = theRequest.newClient(theServletRequest, getContext(theRequest), myConfig, interceptor);
|
|
||||||
|
|
||||||
Conformance conformance;
|
|
||||||
try {
|
|
||||||
conformance = (Conformance) client.conformance();
|
|
||||||
} catch (Exception e) {
|
|
||||||
ourLog.warn("Failed to load conformance statement", e);
|
|
||||||
theModel.put("errorMsg", "Failed to load conformance statement, error was: " + e.toString());
|
|
||||||
conformance = new Conformance();
|
|
||||||
}
|
|
||||||
|
|
||||||
theModel.put("jsonEncodedConf", getContext(theRequest).newJsonParser().encodeResourceToString(conformance));
|
|
||||||
|
|
||||||
Map<String, Number> resourceCounts = new HashMap<String, Number>();
|
|
||||||
long total = 0;
|
|
||||||
for (Rest nextRest : conformance.getRest()) {
|
|
||||||
for (ca.uhn.fhir.model.dstu.resource.Conformance.RestResource nextResource : nextRest.getResource()) {
|
|
||||||
List<ExtensionDt> exts = nextResource.getUndeclaredExtensionsByUrl(RESOURCE_COUNT_EXT_URL);
|
|
||||||
if (exts != null && exts.size() > 0) {
|
|
||||||
Number nextCount = ((DecimalDt) (exts.get(0).getValue())).getValueAsNumber();
|
|
||||||
resourceCounts.put(nextResource.getType().getValue(), nextCount);
|
|
||||||
total += nextCount.longValue();
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
theModel.put("resourceCounts", resourceCounts);
|
|
||||||
|
|
||||||
if (total > 0) {
|
|
||||||
for (Rest nextRest : conformance.getRest()) {
|
|
||||||
Collections.sort(nextRest.getResource(), new Comparator<ca.uhn.fhir.model.dstu.resource.Conformance.RestResource>() {
|
|
||||||
@Override
|
|
||||||
public int compare(ca.uhn.fhir.model.dstu.resource.Conformance.RestResource theO1, ca.uhn.fhir.model.dstu.resource.Conformance.RestResource theO2) {
|
|
||||||
DecimalDt count1 = new DecimalDt();
|
|
||||||
List<ExtensionDt> count1exts = theO1.getUndeclaredExtensionsByUrl(RESOURCE_COUNT_EXT_URL);
|
|
||||||
if (count1exts != null && count1exts.size() > 0) {
|
|
||||||
count1 = (DecimalDt) count1exts.get(0).getValue();
|
|
||||||
}
|
|
||||||
DecimalDt count2 = new DecimalDt();
|
|
||||||
List<ExtensionDt> count2exts = theO2.getUndeclaredExtensionsByUrl(RESOURCE_COUNT_EXT_URL);
|
|
||||||
if (count2exts != null && count2exts.size() > 0) {
|
|
||||||
count2 = (DecimalDt) count2exts.get(0).getValue();
|
|
||||||
}
|
|
||||||
int retVal = count2.compareTo(count1);
|
|
||||||
if (retVal == 0) {
|
|
||||||
retVal = theO1.getType().getValue().compareTo(theO2.getType().getValue());
|
|
||||||
}
|
|
||||||
return retVal;
|
|
||||||
}
|
|
||||||
});
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
theModel.put("conf", conformance);
|
|
||||||
theModel.put("requiredParamExtension", ExtensionConstants.PARAM_IS_REQUIRED);
|
|
||||||
|
|
||||||
return conformance;
|
|
||||||
}
|
|
||||||
|
|
||||||
private IResource loadAndAddConfDstu2(HttpServletRequest theServletRequest, final HomeRequest theRequest, final ModelMap theModel) {
|
private IResource loadAndAddConfDstu2(HttpServletRequest theServletRequest, final HomeRequest theRequest, final ModelMap theModel) {
|
||||||
CaptureInterceptor interceptor = new CaptureInterceptor();
|
CaptureInterceptor interceptor = new CaptureInterceptor();
|
||||||
|
|
|
@ -21,11 +21,8 @@ import org.springframework.web.bind.annotation.RequestMapping;
|
||||||
import com.google.gson.stream.JsonWriter;
|
import com.google.gson.stream.JsonWriter;
|
||||||
|
|
||||||
import ca.uhn.fhir.context.*;
|
import ca.uhn.fhir.context.*;
|
||||||
import ca.uhn.fhir.model.api.ExtensionDt;
|
|
||||||
import ca.uhn.fhir.model.api.Include;
|
import ca.uhn.fhir.model.api.Include;
|
||||||
import ca.uhn.fhir.model.dstu.resource.Conformance;
|
import ca.uhn.fhir.model.dstu2.resource.Conformance;
|
||||||
import ca.uhn.fhir.model.dstu.resource.Conformance.*;
|
|
||||||
import ca.uhn.fhir.model.dstu.valueset.SearchParamTypeEnum;
|
|
||||||
import ca.uhn.fhir.model.dstu2.valueset.ResourceTypeEnum;
|
import ca.uhn.fhir.model.dstu2.valueset.ResourceTypeEnum;
|
||||||
import ca.uhn.fhir.model.primitive.*;
|
import ca.uhn.fhir.model.primitive.*;
|
||||||
import ca.uhn.fhir.parser.DataFormatException;
|
import ca.uhn.fhir.parser.DataFormatException;
|
||||||
|
@ -36,7 +33,6 @@ import ca.uhn.fhir.rest.gclient.*;
|
||||||
import ca.uhn.fhir.rest.gclient.NumberClientParam.IMatches;
|
import ca.uhn.fhir.rest.gclient.NumberClientParam.IMatches;
|
||||||
import ca.uhn.fhir.rest.gclient.QuantityClientParam.IAndUnits;
|
import ca.uhn.fhir.rest.gclient.QuantityClientParam.IAndUnits;
|
||||||
import ca.uhn.fhir.to.model.*;
|
import ca.uhn.fhir.to.model.*;
|
||||||
import ca.uhn.fhir.util.ExtensionConstants;
|
|
||||||
|
|
||||||
@org.springframework.stereotype.Controller()
|
@org.springframework.stereotype.Controller()
|
||||||
public class Controller extends BaseController {
|
public class Controller extends BaseController {
|
||||||
|
@ -309,19 +305,15 @@ public class Controller extends BaseController {
|
||||||
TreeSet<String> includes = new TreeSet<String>();
|
TreeSet<String> includes = new TreeSet<String>();
|
||||||
TreeSet<String> revIncludes = new TreeSet<String>();
|
TreeSet<String> revIncludes = new TreeSet<String>();
|
||||||
TreeSet<String> sortParams = new TreeSet<String>();
|
TreeSet<String> sortParams = new TreeSet<String>();
|
||||||
List<RestQuery> queries = new ArrayList<Conformance.RestQuery>();
|
|
||||||
boolean haveSearchParams = false;
|
boolean haveSearchParams = false;
|
||||||
List<List<String>> queryIncludes = new ArrayList<List<String>>();
|
List<List<String>> queryIncludes = new ArrayList<List<String>>();
|
||||||
|
|
||||||
switch (theRequest.getFhirVersion(myConfig)) {
|
switch (theRequest.getFhirVersion(myConfig)) {
|
||||||
case DSTU1:
|
|
||||||
haveSearchParams = extractSearchParamsDstu1(conformance, resourceName, includes, sortParams, queries, haveSearchParams, queryIncludes);
|
|
||||||
break;
|
|
||||||
case DSTU2:
|
case DSTU2:
|
||||||
haveSearchParams = extractSearchParamsDstu2(conformance, resourceName, includes, revIncludes, sortParams, queries, haveSearchParams, queryIncludes);
|
haveSearchParams = extractSearchParamsDstu2(conformance, resourceName, includes, revIncludes, sortParams, haveSearchParams, queryIncludes);
|
||||||
break;
|
break;
|
||||||
case DSTU3:
|
case DSTU3:
|
||||||
haveSearchParams = extractSearchParamsDstu3CapabilityStatement(conformance, resourceName, includes, revIncludes, sortParams, queries, haveSearchParams, queryIncludes);
|
haveSearchParams = extractSearchParamsDstu3CapabilityStatement(conformance, resourceName, includes, revIncludes, sortParams, haveSearchParams, queryIncludes);
|
||||||
break;
|
break;
|
||||||
default:
|
default:
|
||||||
throw new IllegalStateException("Unknown FHIR version: " + theRequest.getFhirVersion(myConfig));
|
throw new IllegalStateException("Unknown FHIR version: " + theRequest.getFhirVersion(myConfig));
|
||||||
|
@ -329,7 +321,7 @@ public class Controller extends BaseController {
|
||||||
|
|
||||||
theModel.put("includes", includes);
|
theModel.put("includes", includes);
|
||||||
theModel.put("revincludes", revIncludes);
|
theModel.put("revincludes", revIncludes);
|
||||||
theModel.put("queries", queries);
|
theModel.put("queries", Collections.emptyList()); //TODO: remove this, it does nothing
|
||||||
theModel.put("haveSearchParams", haveSearchParams);
|
theModel.put("haveSearchParams", haveSearchParams);
|
||||||
theModel.put("queryIncludes", queryIncludes);
|
theModel.put("queryIncludes", queryIncludes);
|
||||||
theModel.put("sortParams", sortParams);
|
theModel.put("sortParams", sortParams);
|
||||||
|
@ -702,55 +694,8 @@ public class Controller extends BaseController {
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
private boolean extractSearchParamsDstu1(IBaseResource theConformance, String resourceName, TreeSet<String> includes, TreeSet<String> sortParams, List<RestQuery> queries, boolean haveSearchParams, List<List<String>> queryIncludes) {
|
|
||||||
Conformance conformance = (Conformance) theConformance;
|
|
||||||
for (Rest nextRest : conformance.getRest()) {
|
|
||||||
for (RestResource nextRes : nextRest.getResource()) {
|
|
||||||
if (nextRes.getType().getValue().equals(resourceName)) {
|
|
||||||
for (StringDt next : nextRes.getSearchInclude()) {
|
|
||||||
if (next.isEmpty() == false) {
|
|
||||||
includes.add(next.getValue());
|
|
||||||
}
|
|
||||||
}
|
|
||||||
for (RestResourceSearchParam next : nextRes.getSearchParam()) {
|
|
||||||
if (next.getType().getValueAsEnum() != SearchParamTypeEnum.COMPOSITE) {
|
|
||||||
sortParams.add(next.getName().getValue());
|
|
||||||
}
|
|
||||||
}
|
|
||||||
if (nextRes.getSearchParam().size() > 0) {
|
|
||||||
haveSearchParams = true;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
for (RestQuery nextQuery : nextRest.getQuery()) {
|
|
||||||
boolean queryMatchesResource = false;
|
|
||||||
List<ExtensionDt> returnTypeExt = nextQuery.getUndeclaredExtensionsByUrl(ExtensionConstants.QUERY_RETURN_TYPE);
|
|
||||||
if (returnTypeExt != null) {
|
|
||||||
for (ExtensionDt nextExt : returnTypeExt) {
|
|
||||||
if (resourceName.equals(nextExt.getValueAsPrimitive().getValueAsString())) {
|
|
||||||
queries.add(nextQuery);
|
|
||||||
queryMatchesResource = true;
|
|
||||||
break;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
if (queryMatchesResource) {
|
private boolean extractSearchParamsDstu2(IBaseResource theConformance, String resourceName, TreeSet<String> includes, TreeSet<String> theRevIncludes, TreeSet<String> sortParams, boolean haveSearchParams, List<List<String>> queryIncludes) {
|
||||||
ArrayList<String> nextQueryIncludes = new ArrayList<String>();
|
|
||||||
queryIncludes.add(nextQueryIncludes);
|
|
||||||
List<ExtensionDt> includesExt = nextQuery.getUndeclaredExtensionsByUrl(ExtensionConstants.QUERY_ALLOWED_INCLUDE);
|
|
||||||
if (includesExt != null) {
|
|
||||||
for (ExtensionDt nextExt : includesExt) {
|
|
||||||
nextQueryIncludes.add(nextExt.getValueAsPrimitive().getValueAsString());
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return haveSearchParams;
|
|
||||||
}
|
|
||||||
|
|
||||||
private boolean extractSearchParamsDstu2(IBaseResource theConformance, String resourceName, TreeSet<String> includes, TreeSet<String> theRevIncludes, TreeSet<String> sortParams, List<RestQuery> queries, boolean haveSearchParams, List<List<String>> queryIncludes) {
|
|
||||||
ca.uhn.fhir.model.dstu2.resource.Conformance conformance = (ca.uhn.fhir.model.dstu2.resource.Conformance) theConformance;
|
ca.uhn.fhir.model.dstu2.resource.Conformance conformance = (ca.uhn.fhir.model.dstu2.resource.Conformance) theConformance;
|
||||||
for (ca.uhn.fhir.model.dstu2.resource.Conformance.Rest nextRest : conformance.getRest()) {
|
for (ca.uhn.fhir.model.dstu2.resource.Conformance.Rest nextRest : conformance.getRest()) {
|
||||||
for (ca.uhn.fhir.model.dstu2.resource.Conformance.RestResource nextRes : nextRest.getResource()) {
|
for (ca.uhn.fhir.model.dstu2.resource.Conformance.RestResource nextRes : nextRest.getResource()) {
|
||||||
|
@ -786,7 +731,7 @@ public class Controller extends BaseController {
|
||||||
return haveSearchParams;
|
return haveSearchParams;
|
||||||
}
|
}
|
||||||
|
|
||||||
private boolean extractSearchParamsDstu3CapabilityStatement(IBaseResource theConformance, String resourceName, TreeSet<String> includes, TreeSet<String> theRevIncludes, TreeSet<String> sortParams, List<RestQuery> queries, boolean haveSearchParams, List<List<String>> queryIncludes) {
|
private boolean extractSearchParamsDstu3CapabilityStatement(IBaseResource theConformance, String resourceName, TreeSet<String> includes, TreeSet<String> theRevIncludes, TreeSet<String> sortParams, boolean haveSearchParams, List<List<String>> queryIncludes) {
|
||||||
CapabilityStatement conformance = (org.hl7.fhir.dstu3.model.CapabilityStatement) theConformance;
|
CapabilityStatement conformance = (org.hl7.fhir.dstu3.model.CapabilityStatement) theConformance;
|
||||||
for (CapabilityStatementRestComponent nextRest : conformance.getRest()) {
|
for (CapabilityStatementRestComponent nextRest : conformance.getRest()) {
|
||||||
for (CapabilityStatementRestResourceComponent nextRes : nextRest.getResource()) {
|
for (CapabilityStatementRestResourceComponent nextRes : nextRest.getResource()) {
|
||||||
|
|
|
@ -10,9 +10,9 @@ import org.springframework.context.annotation.AnnotationConfigApplicationContext
|
||||||
import ca.uhn.fhir.model.api.IResource;
|
import ca.uhn.fhir.model.api.IResource;
|
||||||
import ca.uhn.fhir.model.api.Include;
|
import ca.uhn.fhir.model.api.Include;
|
||||||
import ca.uhn.fhir.model.api.annotation.Description;
|
import ca.uhn.fhir.model.api.annotation.Description;
|
||||||
import ca.uhn.fhir.model.dstu.composite.IdentifierDt;
|
import ca.uhn.fhir.model.dstu2.composite.IdentifierDt;
|
||||||
import ca.uhn.fhir.model.dstu.resource.DiagnosticReport;
|
import ca.uhn.fhir.model.dstu2.resource.DiagnosticReport;
|
||||||
import ca.uhn.fhir.model.dstu.resource.Patient;
|
import ca.uhn.fhir.model.dstu2.resource.Patient;
|
||||||
import ca.uhn.fhir.rest.annotation.*;
|
import ca.uhn.fhir.rest.annotation.*;
|
||||||
import ca.uhn.fhir.rest.param.DateRangeParam;
|
import ca.uhn.fhir.rest.param.DateRangeParam;
|
||||||
import ca.uhn.fhir.rest.param.TokenOrListParam;
|
import ca.uhn.fhir.rest.param.TokenOrListParam;
|
||||||
|
@ -139,14 +139,14 @@ public class OverlayTestApp {
|
||||||
|
|
||||||
@Description(shortDefinition = "This is a query by date!")
|
@Description(shortDefinition = "This is a query by date!")
|
||||||
@Search
|
@Search
|
||||||
public List<DiagnosticReport> findDiagnosticReportsByPatient(@RequiredParam(name = DiagnosticReport.SP_SUBJECT + '.' + Patient.SP_IDENTIFIER) IdentifierDt thePatientId, @OptionalParam(name = DiagnosticReport.SP_NAME) TokenOrListParam theNames,
|
public List<DiagnosticReport> findDiagnosticReportsByPatient(@RequiredParam(name = DiagnosticReport.SP_SUBJECT + '.' + Patient.SP_IDENTIFIER) IdentifierDt thePatientId, @OptionalParam(name = DiagnosticReport.SP_CODE) TokenOrListParam theNames,
|
||||||
@OptionalParam(name = DiagnosticReport.SP_DATE) DateRangeParam theDateRange, @IncludeParam(allow = { "DiagnosticReport.result" }) Set<Include> theIncludes) throws Exception {
|
@OptionalParam(name = DiagnosticReport.SP_DATE) DateRangeParam theDateRange, @IncludeParam(allow = { "DiagnosticReport.result" }) Set<Include> theIncludes) throws Exception {
|
||||||
return null;
|
return null;
|
||||||
}
|
}
|
||||||
|
|
||||||
@Description(shortDefinition = "This is a query by issued.. blah blah foo bar blah blah")
|
@Description(shortDefinition = "This is a query by issued.. blah blah foo bar blah blah")
|
||||||
@Search
|
@Search
|
||||||
public List<DiagnosticReport> findDiagnosticReportsByPatientIssued(@RequiredParam(name = DiagnosticReport.SP_SUBJECT + '.' + Patient.SP_IDENTIFIER) IdentifierDt thePatientId, @OptionalParam(name = DiagnosticReport.SP_NAME) TokenOrListParam theNames,
|
public List<DiagnosticReport> findDiagnosticReportsByPatientIssued(@RequiredParam(name = DiagnosticReport.SP_SUBJECT + '.' + Patient.SP_IDENTIFIER) IdentifierDt thePatientId, @OptionalParam(name = DiagnosticReport.SP_CODE) TokenOrListParam theNames,
|
||||||
@OptionalParam(name = DiagnosticReport.SP_ISSUED) DateRangeParam theDateRange, @IncludeParam(allow = { "DiagnosticReport.result" }) Set<Include> theIncludes) throws Exception {
|
@OptionalParam(name = DiagnosticReport.SP_ISSUED) DateRangeParam theDateRange, @IncludeParam(allow = { "DiagnosticReport.result" }) Set<Include> theIncludes) throws Exception {
|
||||||
return null;
|
return null;
|
||||||
}
|
}
|
||||||
|
|
|
@ -1,34 +0,0 @@
|
||||||
package test;
|
|
||||||
|
|
||||||
import static org.junit.Assert.*;
|
|
||||||
|
|
||||||
import java.io.IOException;
|
|
||||||
|
|
||||||
import org.junit.Test;
|
|
||||||
|
|
||||||
import ca.uhn.fhir.context.FhirContext;
|
|
||||||
import ca.uhn.fhir.parser.DataFormatException;
|
|
||||||
import ca.uhn.test.customstructs.resource.Organization;
|
|
||||||
import ca.uhn.test.customstructs.valueset.ConnectingGTAProviderIDNamespacesEnum;
|
|
||||||
|
|
||||||
public class TestCustomStructures {
|
|
||||||
private static final org.slf4j.Logger ourLog = org.slf4j.LoggerFactory.getLogger(TestCustomStructures.class);
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void testExtension() throws DataFormatException, IOException {
|
|
||||||
|
|
||||||
Organization org = new Organization();
|
|
||||||
org.addProviderIdPool(ConnectingGTAProviderIDNamespacesEnum.UNIVERSITY_HEALTH_NETWORK_PROVIDER_IDS);
|
|
||||||
|
|
||||||
FhirContext ctx = new FhirContext(Organization.class);
|
|
||||||
String str = ctx.newXmlParser().encodeResourceToString(org);
|
|
||||||
|
|
||||||
ourLog.info(str);
|
|
||||||
|
|
||||||
assertTrue(str.contains("<extension url=\"http://foo1#providerIdPool\"><valueCode value=\"urn:oid:1.3.6.1.4.1.12201.1\"/></extension>"));
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
}
|
|
|
@ -1,23 +0,0 @@
|
||||||
package test;
|
|
||||||
|
|
||||||
import java.util.List;
|
|
||||||
|
|
||||||
import org.junit.Test;
|
|
||||||
|
|
||||||
import ca.uhn.test.generic.single.TestConfigDstu1;
|
|
||||||
import ca.uhn.test.generic.multi.*;
|
|
||||||
import test.ResourceTest;
|
|
||||||
|
|
||||||
public class TestGenerics {
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void testGeneratedListReferencingGenerics() {
|
|
||||||
// This won't compile if tinder didn't generate the right names...
|
|
||||||
TestConfigDstu1 config = new TestConfigDstu1();
|
|
||||||
List<ResourceTest> generics = config.testProvidersDstu1();
|
|
||||||
for (ResourceTest generic : generics) {
|
|
||||||
String name = generic.getResourceName();
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
|
@ -3,7 +3,7 @@ package test;
|
||||||
import org.junit.Test;
|
import org.junit.Test;
|
||||||
|
|
||||||
import ca.uhn.test.realstructs.resource.ListResource;
|
import ca.uhn.test.realstructs.resource.ListResource;
|
||||||
import ca.uhn.test.realstructs.resource.SecurityEvent.ObjectElement;
|
import ca.uhn.test.realstructs.resource.AuditEvent.ObjectElement;
|
||||||
|
|
||||||
public class TestParticulars {
|
public class TestParticulars {
|
||||||
|
|
||||||
|
|
|
@ -1,18 +0,0 @@
|
||||||
package test;
|
|
||||||
|
|
||||||
import static org.junit.Assert.*;
|
|
||||||
|
|
||||||
import org.junit.Test;
|
|
||||||
|
|
||||||
import ca.uhn.test.customstructs.resource.Patient;
|
|
||||||
|
|
||||||
public class TestProfileGenerator {
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void testIncludes() {
|
|
||||||
|
|
||||||
assertEquals("Patient.link.other", Patient.INCLUDE_LINK_OTHER.getValue());
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
Loading…
Reference in New Issue