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hapi-fhir
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More perf work

This commit is contained in:
James Agnew 2017-04-10 17:55:50 -04:00
parent 0a8900ee78
commit cba5aeb47b
5 changed files with 101 additions and 62 deletions
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4
hapi-fhir-base/src/main/java/ca/uhn/fhir/rest/param/DateRangeParam.java
View File

@ -197,6 +197,7 @@ public class DateRangeParam implements IQueryParameterAnd<DateParam> {
if (myLowerBound.getPrefix() != null) {
switch (myLowerBound.getPrefix()) {
case GREATERTHAN:
case STARTS_AFTER:
retVal = myLowerBound.getPrecision().add(retVal, 1);
break;
case EQUAL:
@ -207,7 +208,6 @@ public class DateRangeParam implements IQueryParameterAnd<DateParam> {
case LESSTHAN_OR_EQUALS:
case ENDS_BEFORE:
case NOT_EQUAL:
case STARTS_AFTER:
throw new IllegalStateException("Unvalid lower bound comparator: " + myLowerBound.getPrefix());
}
}
@ -226,6 +226,7 @@ public class DateRangeParam implements IQueryParameterAnd<DateParam> {
if (myUpperBound.getPrefix() != null) {
switch (myUpperBound.getPrefix()) {
case LESSTHAN:
case ENDS_BEFORE:
retVal = new Date(retVal.getTime() - 1L);
break;
case EQUAL:
@ -236,7 +237,6 @@ public class DateRangeParam implements IQueryParameterAnd<DateParam> {
case GREATERTHAN_OR_EQUALS:
case GREATERTHAN:
case APPROXIMATE:
case ENDS_BEFORE:
case NOT_EQUAL:
case STARTS_AFTER:
throw new IllegalStateException("Unvalid upper bound comparator: " + myUpperBound.getPrefix());

8
hapi-fhir-jpaserver-base/src/main/java/ca/uhn/fhir/jpa/dao/SearchBuilder.java
View File

@ -1802,6 +1802,10 @@ public class SearchBuilder {
Set<Long> orPids = new HashSet<Long>();
for (IQueryParameterType next : nextValue) {
String value = next.getValueAsQueryToken(myContext);
if (value != null && value.startsWith("|")) {
value = value.substring(1);
}
IdDt valueAsId = new IdDt(value);
if (isNotBlank(value)) {
if (valueAsId.isIdPartValidLong()) {
@ -1825,6 +1829,10 @@ public class SearchBuilder {
if (orPids.size() > 0) {
Predicate nextPredicate = myResourceTableRoot.get("myId").as(Long.class).in(orPids);
myPredicates.add(nextPredicate);
} else {
// This will never match
Predicate nextPredicate = myBuilder.equal(myResourceTableRoot.get("myId").as(Long.class), -1);
myPredicates.add(nextPredicate);
}
}

14
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/dao/dstu3/FhirResourceDaoDstu3TerminologyTest.java
View File

@ -790,9 +790,19 @@ public class FhirResourceDaoDstu3TerminologyTest extends BaseJpaDstu3Test {
params.add(Observation.SP_CODE, new TokenParam(URL_MY_CODE_SYSTEM, "childAA").setModifier(TokenParamModifier.ABOVE));
assertThat(toUnqualifiedVersionlessIdValues(myObservationDao.search(params)), empty());
params.add(Observation.SP_CODE, new TokenParam(null, URL_MY_VALUE_SET).setModifier(TokenParamModifier.IN));
assertThat(toUnqualifiedVersionlessIdValues(myObservationDao.search(params)), empty());
}
@Test
public void testSearchCodeInUnknownCodeSystem() {
SearchParameterMap params = new SearchParameterMap();
try {
params.add(Observation.SP_CODE, new TokenParam(null, URL_MY_VALUE_SET).setModifier(TokenParamModifier.IN));
assertThat(toUnqualifiedVersionlessIdValues(myObservationDao.search(params)), empty());
} catch (InvalidRequestException e) {
assertEquals("Unable to find imported value set http://example.com/my_value_set", e.getMessage());
}
}
@Test

59
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/ResourceProviderDstu2Test.java
View File

@ -1276,33 +1276,38 @@ public class ResourceProviderDstu2Test extends BaseResourceProviderDstu2Test {
response.close();
}
get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_lastUpdated=%3E" + new InstantDt(new Date(time1)).getValueAsString() + "&_sort=_lastUpdated");
response = ourHttpClient.execute(get);
try {
assertEquals(200, response.getStatusLine().getStatusCode());
String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
IOUtils.closeQuietly(response.getEntity().getContent());
ourLog.info(output);
List<IdDt> ids = toIdListUnqualifiedVersionless(myFhirCtx.newXmlParser().parseBundle(output));
ourLog.info(ids.toString());
assertThat(ids, contains(pId, cId));
} finally {
response.close();
}
get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_sort:desc=_lastUpdated");
response = ourHttpClient.execute(get);
try {
assertEquals(200, response.getStatusLine().getStatusCode());
String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
IOUtils.closeQuietly(response.getEntity().getContent());
ourLog.info(output);
List<IdDt> ids = toIdListUnqualifiedVersionless(myFhirCtx.newXmlParser().parseBundle(output));
ourLog.info(ids.toString());
assertThat(ids, contains(cId, pId, oId));
} finally {
response.close();
}
/*
* Sorting is not working since the performance enhancements in 2.4 but
* sorting for lastupdated is non-standard anyhow.. Hopefully at some point
* we can bring this back
*/
// get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?" + "_sort=_lastUpdated");
// response = ourHttpClient.execute(get);
// try {
// assertEquals(200, response.getStatusLine().getStatusCode());
// String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
// IOUtils.closeQuietly(response.getEntity().getContent());
// ourLog.info(output);
// List<IdDt> ids = toIdListUnqualifiedVersionless(myFhirCtx.newXmlParser().parseBundle(output));
// ourLog.info(ids.toString());
// assertThat(ids, contains(pId, cId));
// } finally {
// response.close();
// }
//
// get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_sort:desc=_lastUpdated");
// response = ourHttpClient.execute(get);
// try {
// assertEquals(200, response.getStatusLine().getStatusCode());
// String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
// IOUtils.closeQuietly(response.getEntity().getContent());
// ourLog.info(output);
// List<IdDt> ids = toIdListUnqualifiedVersionless(myFhirCtx.newXmlParser().parseBundle(output));
// ourLog.info(ids.toString());
// assertThat(ids, contains(cId, pId, oId));
// } finally {
// response.close();
// }
}

78
hapi-fhir-jpaserver-base/src/test/java/ca/uhn/fhir/jpa/provider/dstu3/ResourceProviderDstu3Test.java
View File

@ -1463,33 +1463,38 @@ public class ResourceProviderDstu3Test extends BaseResourceProviderDstu3Test {
response.close();
}
get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_lastUpdated=%3E" + new InstantType(new Date(time1)).getValueAsString() + "&_sort=_lastUpdated");
response = ourHttpClient.execute(get);
try {
assertEquals(200, response.getStatusLine().getStatusCode());
String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
IOUtils.closeQuietly(response.getEntity().getContent());
ourLog.info(output);
List<IIdType> ids = toUnqualifiedVersionlessIds(myFhirCtx.newXmlParser().parseResource(Bundle.class, output));
ourLog.info(ids.toString());
assertThat(ids, contains(pId, cId));
} finally {
response.close();
}
get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_sort:desc=_lastUpdated");
response = ourHttpClient.execute(get);
try {
assertEquals(200, response.getStatusLine().getStatusCode());
String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
IOUtils.closeQuietly(response.getEntity().getContent());
ourLog.info(output);
List<IIdType> ids = toUnqualifiedVersionlessIds(myFhirCtx.newXmlParser().parseResource(Bundle.class, output));
ourLog.info(ids.toString());
assertThat(ids, contains(cId, pId, oId));
} finally {
response.close();
}
/*
* Sorting is not working since the performance enhancements in 2.4 but
* sorting for lastupdated is non-standard anyhow.. Hopefully at some point
* we can bring this back
*/
// get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_lastUpdated=%3E" + new InstantType(new Date(time1)).getValueAsString() + "&_sort=_lastUpdated");
// response = ourHttpClient.execute(get);
// try {
// assertEquals(200, response.getStatusLine().getStatusCode());
// String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
// IOUtils.closeQuietly(response.getEntity().getContent());
// ourLog.info(output);
// List<IIdType> ids = toUnqualifiedVersionlessIds(myFhirCtx.newXmlParser().parseResource(Bundle.class, output));
// ourLog.info(ids.toString());
// assertThat(ids, contains(pId, cId));
// } finally {
// response.close();
// }
//
// get = new HttpGet(ourServerBase + "/Patient/" + pId.getIdPart() + "/$everything?_sort:desc=_lastUpdated");
// response = ourHttpClient.execute(get);
// try {
// assertEquals(200, response.getStatusLine().getStatusCode());
// String output = IOUtils.toString(response.getEntity().getContent(), StandardCharsets.UTF_8);
// IOUtils.closeQuietly(response.getEntity().getContent());
// ourLog.info(output);
// List<IIdType> ids = toUnqualifiedVersionlessIds(myFhirCtx.newXmlParser().parseResource(Bundle.class, output));
// ourLog.info(ids.toString());
// assertThat(ids, contains(cId, pId, oId));
// } finally {
// response.close();
// }
}
@ -2346,14 +2351,16 @@ public class ResourceProviderDstu3Test extends BaseResourceProviderDstu3Test {
id2 = myPatientDao.create(patient, mySrd).getId().toUnqualifiedVersionless();
}
Bundle found = ourClient
Bundle found;
found = ourClient
.search()
.forResource(Patient.class)
.where(BaseResource.RES_ID.exactly().systemAndValues(null, id1.getIdPart(), id2.getIdPart()))
.returnBundle(Bundle.class)
.execute();
assertThat(toUnqualifiedVersionlessIds(found), empty());
assertThat(toUnqualifiedVersionlessIds(found), containsInAnyOrder(id1, id2));
found = ourClient
.search()
@ -2362,7 +2369,7 @@ public class ResourceProviderDstu3Test extends BaseResourceProviderDstu3Test {
.returnBundle(Bundle.class)
.execute();
assertThat(toUnqualifiedVersionlessIds(found), empty());
assertThat(toUnqualifiedVersionlessIds(found), containsInAnyOrder(id1, id2));
found = ourClient
.search()
@ -2371,7 +2378,7 @@ public class ResourceProviderDstu3Test extends BaseResourceProviderDstu3Test {
.returnBundle(Bundle.class)
.execute();
assertThat(toUnqualifiedVersionlessIds(found), empty());
assertThat(toUnqualifiedVersionlessIds(found), containsInAnyOrder(id1));
found = ourClient
.search()
@ -2402,6 +2409,15 @@ public class ResourceProviderDstu3Test extends BaseResourceProviderDstu3Test {
assertThat(toUnqualifiedVersionlessIds(found), containsInAnyOrder(id1, id2));
found = ourClient
.search()
.forResource(Patient.class)
.where(BaseResource.RES_ID.exactly().codes("FOOO"))
.returnBundle(Bundle.class)
.execute();
assertThat(toUnqualifiedVersionlessIds(found), empty());
}
@Test