Automated Migration Testing (HAPI-FHIR) V7_4_0 (#6170)
* Automated Migration Testing (HAPI-FHIR) - updated test migration scripts for 7_4_0 * Automated Migration Testing (HAPI-FHIR) - updated test migration scripts for 7_2_0
This commit is contained in:
volodymyr-korzh
GitHub
parent
c2d4a2a2e6
commit
d32433e68b
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@ -108,10 +108,15 @@ public class HapiEmbeddedDatabasesExtension implements AfterAllCallback {
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try {
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myDatabaseInitializerHelper.insertPersistenceTestData(getEmbeddedDatabase(theDriverType), theVersionEnum);
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} catch (Exception theE) {
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ourLog.info(
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"Could not insert persistence test data most likely because we don't have any for version {} and driver {}",
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theVersionEnum,
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theDriverType);
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if (theE.getMessage().contains("Error loading file: migration/releases/")) {
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ourLog.info(
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"Could not insert persistence test data most likely because we don't have any for version {} and driver {}",
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theVersionEnum,
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theDriverType);
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} else {
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// throw sql execution Exceptions
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throw theE;
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}
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}
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}
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@ -1 +1,91 @@
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INSERT INTO TRM_CONCEPT_MAP_GRP_ELM_TGT (PID, TARGET_CODE, CONCEPT_MAP_URL, TARGET_DISPLAY, TARGET_EQUIVALENCE, SYSTEM_URL, SYSTEM_VERSION, VALUESET_URL, CONCEPT_MAP_GRP_ELM_PID) VALUES (61, NULL, NULL, 'PYRIDOXINE', 'UNMATCHED', NULL, NULL, NULL, 60);
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INSERT INTO TRM_CONCEPT (
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PID,
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CODEVAL,
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CODESYSTEM_PID,
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DISPLAY,
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INDEX_STATUS,
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PARENT_PIDS,
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PARENT_PIDS_VC,
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CODE_SEQUENCE,
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CONCEPT_UPDATED
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) VALUES (
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1,
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'LA4393-0',
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54,
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'CR_1430_Reason no radiation',
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1,
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'1415721',
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'1415721',
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3,
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'2024-05-01 17:02:39.139'
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);
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INSERT INTO TRM_VALUESET_CONCEPT (
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PID,
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CODEVAL,
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DISPLAY,
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INDEX_STATUS,
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VALUESET_ORDER,
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SOURCE_DIRECT_PARENT_PIDS,
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SOURCE_DIRECT_PARENT_PIDS_VC,
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SOURCE_PID,
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SYSTEM_URL,
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SYSTEM_VER,
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VALUESET_PID
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) VALUES (
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1,
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'LA4382-3',
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'CR_1550_Radiation treatment location',
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1,
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2,
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'1415722',
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'1415722',
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1,
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'HTTP://LOINC.ORG',
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'V2.67',
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59
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);
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INSERT INTO TRM_CONCEPT_PROPERTY (
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PID,
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PROP_CODESYSTEM,
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PROP_DISPLAY,
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PROP_KEY,
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PROP_TYPE,
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PROP_VAL,
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PROP_VAL_BIN,
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PROP_VAL_LOB,
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CS_VER_PID,
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CONCEPT_PID
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) VALUES (
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154,
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'http://loinc.org',
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'code-A',
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'CODING',
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1,
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'LP98185-9',
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'\x48656c6c6f20776f726c6421',
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83006307,
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54,
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1
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);
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INSERT INTO HFJ_BINARY_STORAGE_BLOB (
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BLOB_ID,
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BLOB_DATA,
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CONTENT_TYPE,
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BLOB_HASH,
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PUBLISHED_DATE,
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RESOURCE_ID,
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BLOB_SIZE,
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STORAGE_CONTENT_BIN
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) VALUES (
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'1',
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72995,
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'TEXT',
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'dc7197cfab936698bef7818975c185a9b88b71a0a0a2493deea487706ddf20cb',
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'2024-06-15 09:58:42.92',
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'1678',
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16,
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'\x48656c6c6f20776f726c6421'
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);
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@ -1 +1,91 @@
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INSERT INTO TRM_CONCEPT_MAP_GRP_ELM_TGT (PID, TARGET_CODE, CONCEPT_MAP_URL, TARGET_DISPLAY, TARGET_EQUIVALENCE, SYSTEM_URL, SYSTEM_VERSION, VALUESET_URL, CONCEPT_MAP_GRP_ELM_PID) VALUES (61, NULL, NULL, 'PYRIDOXINE', 'UNMATCHED', NULL, NULL, NULL, 60);
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INSERT INTO TRM_CONCEPT (
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PID,
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CODEVAL,
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CODESYSTEM_PID,
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DISPLAY,
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INDEX_STATUS,
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PARENT_PIDS,
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PARENT_PIDS_VC,
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CODE_SEQUENCE,
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CONCEPT_UPDATED
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) VALUES (
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1,
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'LA4393-0',
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54,
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'CR_1430_Reason no radiation',
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1,
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'1415721',
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'1415721',
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3,
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'2024-05-01 17:02:39.139'
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);
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INSERT INTO TRM_VALUESET_CONCEPT (
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PID,
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CODEVAL,
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DISPLAY,
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INDEX_STATUS,
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VALUESET_ORDER,
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SOURCE_DIRECT_PARENT_PIDS,
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SOURCE_DIRECT_PARENT_PIDS_VC,
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SOURCE_PID,
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SYSTEM_URL,
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SYSTEM_VER,
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VALUESET_PID
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) VALUES (
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1,
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'LA4382-3',
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'CR_1550_Radiation treatment location',
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1,
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2,
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'1415722',
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'1415722',
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1,
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'HTTP://LOINC.ORG',
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'V2.67',
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59
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);
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INSERT INTO TRM_CONCEPT_PROPERTY (
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PID,
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PROP_CODESYSTEM,
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PROP_DISPLAY,
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PROP_KEY,
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PROP_TYPE,
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PROP_VAL,
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PROP_VAL_BIN,
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PROP_VAL_LOB,
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CS_VER_PID,
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CONCEPT_PID
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) VALUES (
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154,
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'http://loinc.org',
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'code-A',
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'CODING',
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1,
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'LP98185-9',
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8479927,
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83006307,
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54,
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1
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);
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INSERT INTO HFJ_BINARY_STORAGE_BLOB (
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BLOB_ID,
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BLOB_DATA,
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CONTENT_TYPE,
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BLOB_HASH,
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PUBLISHED_DATE,
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RESOURCE_ID,
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BLOB_SIZE,
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STORAGE_CONTENT_BIN
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) VALUES (
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'1',
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72995,
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'TEXT',
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'dc7197cfab936698bef7818975c185a9b88b71a0a0a2493deea487706ddf20cb',
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'2024-06-15 09:58:42.92',
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'1678',
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16,
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7368816
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);
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@ -1 +1,91 @@
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INSERT INTO TRM_CONCEPT_MAP_GRP_ELM_TGT (PID, TARGET_CODE, CONCEPT_MAP_URL, TARGET_DISPLAY, TARGET_EQUIVALENCE, SYSTEM_URL, SYSTEM_VERSION, VALUESET_URL, CONCEPT_MAP_GRP_ELM_PID) VALUES (61, NULL, NULL, 'PYRIDOXINE', 'UNMATCHED', NULL, NULL, NULL, 60);
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INSERT INTO TRM_CONCEPT (
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PID,
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CODEVAL,
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CODESYSTEM_PID,
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DISPLAY,
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INDEX_STATUS,
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PARENT_PIDS,
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PARENT_PIDS_VC,
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CODE_SEQUENCE,
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CONCEPT_UPDATED
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) VALUES (
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1,
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'LA4393-0',
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54,
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'CR_1430_Reason no radiation',
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1,
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'1415721',
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'1415721',
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3,
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SYSDATE
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);
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INSERT INTO TRM_VALUESET_CONCEPT (
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PID,
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CODEVAL,
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DISPLAY,
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INDEX_STATUS,
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VALUESET_ORDER,
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SOURCE_DIRECT_PARENT_PIDS,
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SOURCE_DIRECT_PARENT_PIDS_VC,
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SOURCE_PID,
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SYSTEM_URL,
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SYSTEM_VER,
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VALUESET_PID
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) VALUES (
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1,
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'LA4382-3',
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'CR_1550_Radiation treatment location',
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1,
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2,
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'1415722',
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'1415722',
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1,
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'HTTP://LOINC.ORG',
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'V2.67',
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59
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);
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INSERT INTO TRM_CONCEPT_PROPERTY (
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PID,
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PROP_CODESYSTEM,
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PROP_DISPLAY,
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PROP_KEY,
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PROP_TYPE,
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PROP_VAL,
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PROP_VAL_BIN,
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PROP_VAL_LOB,
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CS_VER_PID,
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CONCEPT_PID
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) VALUES (
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154,
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'http://loinc.org',
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'code-A',
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'CODING',
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1,
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'LP98185-9',
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HEXTORAW('453d7a34'),
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HEXTORAW('8B9D5255'),
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54,
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1
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);
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INSERT INTO HFJ_BINARY_STORAGE_BLOB (
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BLOB_ID,
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BLOB_DATA,
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CONTENT_TYPE,
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BLOB_HASH,
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PUBLISHED_DATE,
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RESOURCE_ID,
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BLOB_SIZE,
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STORAGE_CONTENT_BIN
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) VALUES (
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'1',
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HEXTORAW('28721FB0'),
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'TEXT',
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'dc7197cfab936698bef7818975c185a9b88b71a0a0a2493deea487706ddf20cb',
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SYSDATE,
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'1678',
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16,
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HEXTORAW('1B25E293')
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);
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@ -1,5 +1,91 @@
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INSERT INTO TRM_CONCEPT_MAP_GRP_ELM_TGT (PID, TARGET_CODE, CONCEPT_MAP_URL, TARGET_DISPLAY, TARGET_EQUIVALENCE, SYSTEM_URL, SYSTEM_VERSION, VALUESET_URL, CONCEPT_MAP_GRP_ELM_PID) VALUES (61, NULL, NULL, 'PYRIDOXINE', 'UNMATCHED', NULL, NULL, NULL, 60);
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INSERT INTO HFJ_BINARY_STORAGE (CONTENT_ID, RESOURCE_ID, CONTENT_TYPE, STORAGE_CONTENT_BIN, PUBLISHED_DATE ) VALUES ('1', '2', 'TEXT', '\x48656c6c6f20776f726c6421', '2023-06-15 09:58:42.92');
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INSERT INTO TRM_CONCEPT (PID, CODEVAL, PARENT_PIDS_VC ) VALUES (1, 'aCode', '1 2 3 4');
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INSERT INTO TRM_CONCEPT_PROPERTY (PID, PROP_KEY, PROP_VAL_BIN, PROP_TYPE) VALUES (1, 'key', '\x48656c6c6f20776f726c6421', 1);
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INSERT INTO TRM_VALUESET_CONCEPT (PID, VALUESET_PID, VALUESET_ORDER, SOURCE_DIRECT_PARENT_PIDS_VC, SYSTEM_URL, CODEVAL) VALUES (1, 59, 1, '1 2 3 4 5 6', 'http://systemUlr', 'codeVal');
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INSERT INTO TRM_CONCEPT (
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PID,
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CODEVAL,
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CODESYSTEM_PID,
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DISPLAY,
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INDEX_STATUS,
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PARENT_PIDS,
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PARENT_PIDS_VC,
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CODE_SEQUENCE,
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CONCEPT_UPDATED
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) VALUES (
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1,
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'LA4393-0',
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54,
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'CR_1430_Reason no radiation',
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1,
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'1415721',
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'1415721',
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3,
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'2024-05-01 17:02:39.139'
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);
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INSERT INTO TRM_VALUESET_CONCEPT (
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PID,
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CODEVAL,
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DISPLAY,
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INDEX_STATUS,
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VALUESET_ORDER,
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SOURCE_DIRECT_PARENT_PIDS,
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SOURCE_DIRECT_PARENT_PIDS_VC,
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SOURCE_PID,
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SYSTEM_URL,
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SYSTEM_VER,
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VALUESET_PID
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) VALUES (
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1,
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'LA4382-3',
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'CR_1550_Radiation treatment location',
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1,
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2,
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'1415722',
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'1415722',
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1,
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'HTTP://LOINC.ORG',
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'V2.67',
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59
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);
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INSERT INTO TRM_CONCEPT_PROPERTY (
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PID,
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PROP_CODESYSTEM,
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PROP_DISPLAY,
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PROP_KEY,
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PROP_TYPE,
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PROP_VAL,
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PROP_VAL_BIN,
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PROP_VAL_LOB,
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CS_VER_PID,
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CONCEPT_PID
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) VALUES (
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154,
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'http://loinc.org',
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'code-A',
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'CODING',
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1,
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'LP98185-9',
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'\x48656c6c6f20776f726c6421',
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83006307,
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54,
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1
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);
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INSERT INTO HFJ_BINARY_STORAGE_BLOB (
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BLOB_ID,
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BLOB_DATA,
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CONTENT_TYPE,
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BLOB_HASH,
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PUBLISHED_DATE,
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RESOURCE_ID,
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BLOB_SIZE,
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STORAGE_CONTENT_BIN
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) VALUES (
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'1',
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72995,
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'TEXT',
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'dc7197cfab936698bef7818975c185a9b88b71a0a0a2493deea487706ddf20cb',
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'2024-06-15 09:58:42.92',
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'1678',
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16,
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'\x48656c6c6f20776f726c6421'
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);
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@ -0,0 +1,53 @@
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INSERT INTO HFJ_RES_SEARCH_URL (
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PARTITION_DATE,
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PARTITION_ID,
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RES_SEARCH_URL,
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CREATED_TIME,
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RES_ID
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) VALUES (
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'2024-04-05',
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1,
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'https://example.com',
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'2024-06-29 10:14:39.69',
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1906
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);
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INSERT INTO HFJ_IDX_CMP_STRING_UNIQ (
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PID,
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PARTITION_DATE,
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PARTITION_ID,
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HASH_COMPLETE,
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HASH_COMPLETE_2,
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IDX_STRING,
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RES_ID
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) VALUES (
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2,
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'2024-04-05',
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1,
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-8173309116900170400,
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-7180360017667394276,
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'Patient?birthdate=2024-07-24&family=FAM',
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1906
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);
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INSERT INTO TRM_CONCEPT_DESIG (
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PID,
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LANG,
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USE_CODE,
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USE_DISPLAY,
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USE_SYSTEM,
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VAL,
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VAL_VC,
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CS_VER_PID,
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CONCEPT_PID
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) VALUES (
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106,
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'NL',
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'900000000000013009',
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'SYNONYM',
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'HTTP://SNOMED.INFO/SCT',
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'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
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'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
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54,
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150
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);
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|
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@ -0,0 +1,53 @@
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INSERT INTO HFJ_RES_SEARCH_URL (
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PARTITION_DATE,
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PARTITION_ID,
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RES_SEARCH_URL,
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CREATED_TIME,
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RES_ID
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) VALUES (
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'2024-04-05',
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1,
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'https://example.com',
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'2024-06-29 10:14:39.69',
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1906
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);
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INSERT INTO HFJ_IDX_CMP_STRING_UNIQ (
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PID,
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PARTITION_DATE,
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PARTITION_ID,
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HASH_COMPLETE,
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HASH_COMPLETE_2,
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IDX_STRING,
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RES_ID
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) VALUES (
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2,
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'2024-04-05',
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1,
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-8173309116900170400,
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-7180360017667394276,
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'Patient?birthdate=2024-07-24&family=FAM',
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1906
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);
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INSERT INTO TRM_CONCEPT_DESIG (
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PID,
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LANG,
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USE_CODE,
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USE_DISPLAY,
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USE_SYSTEM,
|
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VAL,
|
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VAL_VC,
|
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CS_VER_PID,
|
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CONCEPT_PID
|
||||
) VALUES (
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106,
|
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'NL',
|
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'900000000000013009',
|
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'SYNONYM',
|
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'HTTP://SNOMED.INFO/SCT',
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'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
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'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
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54,
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150
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);
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|
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@ -0,0 +1,53 @@
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INSERT INTO HFJ_RES_SEARCH_URL (
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PARTITION_DATE,
|
||||
PARTITION_ID,
|
||||
RES_SEARCH_URL,
|
||||
CREATED_TIME,
|
||||
RES_ID
|
||||
) VALUES (
|
||||
SYSDATE,
|
||||
1,
|
||||
'https://example.com',
|
||||
SYSDATE,
|
||||
1906
|
||||
);
|
||||
|
||||
INSERT INTO HFJ_IDX_CMP_STRING_UNIQ (
|
||||
PID,
|
||||
PARTITION_DATE,
|
||||
PARTITION_ID,
|
||||
HASH_COMPLETE,
|
||||
HASH_COMPLETE_2,
|
||||
IDX_STRING,
|
||||
RES_ID
|
||||
) VALUES (
|
||||
2,
|
||||
SYSDATE,
|
||||
1,
|
||||
-8173309116900170400,
|
||||
-7180360017667394276,
|
||||
'Patient?birthdate=2024-07-24&family=FAM',
|
||||
1906
|
||||
);
|
||||
|
||||
INSERT INTO TRM_CONCEPT_DESIG (
|
||||
PID,
|
||||
LANG,
|
||||
USE_CODE,
|
||||
USE_DISPLAY,
|
||||
USE_SYSTEM,
|
||||
VAL,
|
||||
VAL_VC,
|
||||
CS_VER_PID,
|
||||
CONCEPT_PID
|
||||
) VALUES (
|
||||
106,
|
||||
'NL',
|
||||
'900000000000013009',
|
||||
'SYNONYM',
|
||||
'HTTP://SNOMED.INFO/SCT',
|
||||
'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
|
||||
'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
|
||||
54,
|
||||
150
|
||||
);
|
||||
|
|
@ -0,0 +1,53 @@
|
|||
INSERT INTO HFJ_RES_SEARCH_URL (
|
||||
PARTITION_DATE,
|
||||
PARTITION_ID,
|
||||
RES_SEARCH_URL,
|
||||
CREATED_TIME,
|
||||
RES_ID
|
||||
) VALUES (
|
||||
'2024-04-05',
|
||||
1,
|
||||
'https://example.com',
|
||||
'2024-06-29 10:14:39.69',
|
||||
1906
|
||||
);
|
||||
|
||||
INSERT INTO HFJ_IDX_CMP_STRING_UNIQ (
|
||||
PID,
|
||||
PARTITION_DATE,
|
||||
PARTITION_ID,
|
||||
HASH_COMPLETE,
|
||||
HASH_COMPLETE_2,
|
||||
IDX_STRING,
|
||||
RES_ID
|
||||
) VALUES (
|
||||
2,
|
||||
'2024-04-05',
|
||||
1,
|
||||
-8173309116900170400,
|
||||
-7180360017667394276,
|
||||
'Patient?birthdate=2024-07-24&family=FAM',
|
||||
1906
|
||||
);
|
||||
|
||||
INSERT INTO TRM_CONCEPT_DESIG (
|
||||
PID,
|
||||
LANG,
|
||||
USE_CODE,
|
||||
USE_DISPLAY,
|
||||
USE_SYSTEM,
|
||||
VAL,
|
||||
VAL_VC,
|
||||
CS_VER_PID,
|
||||
CONCEPT_PID
|
||||
) VALUES (
|
||||
106,
|
||||
'NL',
|
||||
'900000000000013009',
|
||||
'SYNONYM',
|
||||
'HTTP://SNOMED.INFO/SCT',
|
||||
'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
|
||||
'SYSTOLISCHE BLOEDDRUK - EXPIRATIE',
|
||||
54,
|
||||
150
|
||||
);
|
||||
|
|
@ -171,7 +171,7 @@ public class HapiSchemaMigrationTest {
|
|||
|
||||
final Object allCountValue = allCount.get(0).values().iterator().next();
|
||||
if (allCountValue instanceof Number allCountNumber) {
|
||||
assertThat(allCountNumber.intValue()).isEqualTo(1);
|
||||
assertThat(allCountNumber.intValue()).isEqualTo(2);
|
||||
}
|
||||
|
||||
try (final Connection connection = theDatabase.getDataSource().getConnection()) {
|
||||
|
|
@ -230,7 +230,7 @@ public class HapiSchemaMigrationTest {
|
|||
final Object queryResultValueVal = queryResultValuesVal.iterator().next();
|
||||
assertThat(queryResultValueVal).isInstanceOf(Number.class);
|
||||
if (queryResultValueVal instanceof Number queryResultNumber) {
|
||||
assertThat(queryResultNumber.intValue()).isEqualTo(1);
|
||||
assertThat(queryResultNumber.intValue()).isEqualTo(2);
|
||||
}
|
||||
|
||||
assertThat(nullValVcCount).hasSize(1);
|
||||
|
|
@ -244,7 +244,7 @@ public class HapiSchemaMigrationTest {
|
|||
|
||||
final Object allCountValue = allCount.get(0).values().iterator().next();
|
||||
if (allCountValue instanceof Number allCountNumber) {
|
||||
assertThat(allCountNumber.intValue()).isEqualTo(1);
|
||||
assertThat(allCountNumber.intValue()).isEqualTo(2);
|
||||
}
|
||||
|
||||
try (final Connection connection = theDatabase.getDataSource().getConnection()) {
|
||||
|
|
|
|||
Loading…
Reference in New Issue